From ca2a0a772d370abd462a17d48436472817940a02 Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Fri, 27 Oct 2023 16:01:50 +0000 Subject: [PATCH 1/5] Auto updating index --- index.json | 33 +-------------------------------- 1 file changed, 1 insertion(+), 32 deletions(-) diff --git a/index.json b/index.json index 5b962d1..eaf1422 100644 --- a/index.json +++ b/index.json @@ -10,7 +10,6 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "f1874f2b2332dff4b4cd6f0075f128dd", @@ -21,14 +20,6 @@ "species": [ 10407 ], - - "config.json.md5": "4137d7ad6f0cc949be434fdb3480eef9", - "config.json.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/work/config.json", - "primer.bed.md5": "f1874f2b2332dff4b4cd6f0075f128dd", - "primer.bed.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/primer.bed", - "reference.fasta.md5": "7612eab3e2389215206ae17187da1791", - "reference.fasta.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/reference.fasta", - "status": "draft" }, "v1.1.0": { @@ -38,7 +29,6 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "dd96ade2e5c59377808368cc116a8361", @@ -49,14 +39,6 @@ "species": [ 10407 ], - - "config.json.md5": "6c9ffb3f43cff3f19a484c58de623b2d", - "config.json.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/work/config.json", - "primer.bed.md5": "dd96ade2e5c59377808368cc116a8361", - "primer.bed.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/primer.bed", - "reference.fasta.md5": "7612eab3e2389215206ae17187da1791", - "reference.fasta.url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/reference.fasta", - "status": "draft" } } @@ -69,7 +51,6 @@ "quick lab", "artic network" ], - "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], @@ -83,7 +64,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v2.0.0": { @@ -105,7 +85,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v3.0.0": { @@ -127,7 +106,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v4.0.0": { @@ -137,7 +115,6 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6c42c61f304702adc6c550ad0941ed6f", @@ -148,7 +125,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v4.1.0": { @@ -157,7 +133,6 @@ "quick lab", "artic network" ], - "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], @@ -171,7 +146,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v5.0.0": { @@ -181,7 +155,6 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6292814b0ec248605c72707d34dda1eb", @@ -192,7 +165,7 @@ "species": [ 2697049 ], - "status": "deprecated" + "status": "deprecated" }, "v5.2.0": { "algorithmversion": "primalscheme2:1.0.0", @@ -201,7 +174,6 @@ "quick lab" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6de462d8ffffcfb2aa37f7eeb205d94b", @@ -212,7 +184,6 @@ "species": [ 2697049 ], - "status": "deprecated" }, "v5.3.2": { @@ -223,7 +194,6 @@ "bccdc" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "722d56c381bf301aa9c5ae8721c78063", @@ -234,7 +204,6 @@ "species": [ 2697049 ], - "status": "validated" } } From 87bd9c6565f05fa06e0f7755e1bd8fdabb4176a4 Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Fri, 27 Oct 2023 17:11:00 +0100 Subject: [PATCH 2/5] Fixed keyerror of the reference hash changes --- .github/workflows/build_index.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/build_index.py b/.github/workflows/build_index.py index be18e36..9cc7d3f 100644 --- a/.github/workflows/build_index.py +++ b/.github/workflows/build_index.py @@ -56,11 +56,11 @@ def parse_version( # Check the hashes in the config.json file match the generated hashes if version_dict["primer_bed_md5"] != info_dict["primer_bed_md5"]: raise ValueError( - f"Hash mismatch for {version_dict['primer.bed.url']}. Expected {version_dict['primer_bed_md5']} but got {info_dict['primer_bed_md5']}" + f"Hash mismatch for {version_dict['primer_bed_md5']}. Expected {version_dict['primer_bed_md5']} but got {info_dict['primer_bed_md5']}" ) if version_dict["reference_fasta_md5"] != info_dict["reference_fasta_md5"]: raise ValueError( - f"Hash mismatch for {version_dict['reference.fasta.url']}. Expected {version_dict['reference_fasta_md5']} but got {info_dict['reference_fasta_md5']}" + f"Hash mismatch for {version_dict['reference_fasta_md5']}. Expected {version_dict['reference_fasta_md5']} but got {info_dict['reference_fasta_md5']}" ) return version_dict From 060318a115c6c90993a3c32126c74e2fd63bb2ec Mon Sep 17 00:00:00 2001 From: ChrisKent Date: Fri, 3 Nov 2023 10:23:16 +0000 Subject: [PATCH 3/5] Added the norovirus-gii/800/v1.0.0 scheme --- .../norovirus-gii/800/v1.0.0/README.md | 43 + .../norovirus-gii/800/v1.0.0/info.json | 21 + .../norovirus-gii/800/v1.0.0/primer.bed | 146 + .../norovirus-gii/800/v1.0.0/reference.fasta | 127 + .../800/v1.0.0/work/NC_044932.1.html | 14 + .../800/v1.0.0/work/NC_044932.1.png | Bin 0 -> 193855 bytes .../800/v1.0.0/work/amplicon.bed | 9 + .../norovirus-gii/800/v1.0.0/work/config.json | 47 + .../norovirus-gii/800/v1.0.0/work/file.log | 16 + .../800/v1.0.0/work/gii.align.mod.fasta | 345504 +++++++++++++++ .../v1.0.0/work/gii.align.mod_entropy.json | 8524 + .../800/v1.0.0/work/gii.align.mod_gc.json | 569 + .../v1.0.0/work/gii.align.mod_occupancy.json | 6310 + .../work/gii.align.mod_thermo_pass.json | 1196 + 14 files changed, 362526 insertions(+) create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/README.md create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/info.json create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/primer.bed create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/reference.fasta create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.html create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.png create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/amplicon.bed create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/config.json create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/file.log create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod.fasta create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_entropy.json create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_gc.json create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_occupancy.json create mode 100644 primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_thermo_pass.json diff --git a/primerschemes/norovirus-gii/800/v1.0.0/README.md b/primerschemes/norovirus-gii/800/v1.0.0/README.md new file mode 100644 index 0000000..68c7342 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/README.md @@ -0,0 +1,43 @@ +# norovirus-gii 800bp v1.0.0 + +## Description + +A scheme designed for pan Norovirus gii + +## Overviews + +![NC_044932.1.png](work/NC_044932.1.png) + +## Details + +```json +{ + "ampliconsize": 800, + "schemeversion": "v1.0.0", + "schemename": "norovirus-gii", + "primer_bed_md5": "3191ec8a80f14a5688d561fe2cf77e34", + "reference_fasta_md5": "88cba0415494cd9837e2523051cb636f", + "status": "draft", + "citations": [], + "authors": [ + "quick lab", + "artic network" + ], + "algorithmversion": "primaldigest:1.2.2", + "species": [ + 122929 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.0.0", + "description": "A scheme designed for pan Norovirus gii" +} +``` + + + +------------------------------------------------------------------------ + +This work is licensed under a [Creative Commons Attribution-ShareAlike 4.0 International License](http://creativecommons.org/licenses/by-sa/4.0/) + +![](https://i.creativecommons.org/l/by-sa/4.0/88x31.png) \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/info.json b/primerschemes/norovirus-gii/800/v1.0.0/info.json new file mode 100644 index 0000000..9cb42fd --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/info.json @@ -0,0 +1,21 @@ +{ + "ampliconsize": 800, + "schemeversion": "v1.0.0", + "schemename": "norovirus-gii", + "primer_bed_md5": "3191ec8a80f14a5688d561fe2cf77e34", + "reference_fasta_md5": "88cba0415494cd9837e2523051cb636f", + "status": "draft", + "citations": [], + "authors": [ + "quick lab", + "artic network" + ], + "algorithmversion": "primaldigest:1.2.2", + "species": [ + 122929 + ], + "license": "CC BY-SA 4.0", + "primerclass": "primerschemes", + "infoschema": "v1.0.0", + "description": "A scheme designed for pan Norovirus gii" +} \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/primer.bed b/primerschemes/norovirus-gii/800/v1.0.0/primer.bed new file mode 100644 index 0000000..bddbf76 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/primer.bed @@ -0,0 +1,146 @@ +NC_044932.1 65 89 17a7cb79_0_LEFT_0 1 + ACAGCAACAACGACATCGCAAAAT +NC_044932.1 67 89 17a7cb79_0_LEFT_1 1 + AGCAACAACGACACCGCAAAAT +NC_044932.1 60 89 17a7cb79_0_LEFT_2 1 + CAAAAACAACAACAACGACAAGGAAAAAT +NC_044932.1 66 89 17a7cb79_0_LEFT_3 1 + CAATGACAGTATCAACACCGCCC +NC_044932.1 66 89 17a7cb79_0_LEFT_4 1 + CAATGACAGTATCAACGCCACCC +NC_044932.1 66 89 17a7cb79_0_LEFT_5 1 + CAGCAACAACGACAACGCAAAAT +NC_044932.1 62 89 17a7cb79_0_LEFT_6 1 + GCAACAACAACAACGACAAGGAAAAAT +NC_044932.1 61 89 17a7cb79_0_LEFT_7 1 + TGCAACAACAACAACGACAAAGAAAAAT +NC_044932.1 899 931 17a7cb79_0_RIGHT_0 1 - AAAGAGTTCTGCTAAGAGTATTAAAGATTCCA +NC_044932.1 899 927 17a7cb79_0_RIGHT_1 1 - AGTTCAGCAAGTAATATCAGAGACTCCA +NC_044932.1 899 927 17a7cb79_0_RIGHT_2 1 - AGTTCTGCCAAGAGTATTAAGGATTCCA +NC_044932.1 899 923 17a7cb79_0_RIGHT_3 1 - CCGCCATTAGGATGACTGTCTCTA +NC_044932.1 899 923 17a7cb79_0_RIGHT_4 1 - CTGCCAAGAGTATCAAGGACTCCA +NC_044932.1 899 928 17a7cb79_0_RIGHT_5 1 - GAGTTCAGCAAATAATATCAGAGACTCCA +NC_044932.1 899 924 17a7cb79_0_RIGHT_6 1 - TCAGCAAGAAGGATCAAGGATTCCA +NC_044932.1 899 924 17a7cb79_0_RIGHT_7 1 - TCAGCCAAAAGGATCAGGGATTCTA +NC_044932.1 899 924 17a7cb79_0_RIGHT_8 1 - TCTGCCAAGAGGATCAAAGATTCCA +NC_044932.1 899 924 17a7cb79_0_RIGHT_9 1 - TCTGCCAAGAGTATCAAAGACTCCA +NC_044932.1 899 924 17a7cb79_0_RIGHT_10 1 - TCTGCCATTAAGATGACTGTCTCCA +NC_044932.1 899 922 17a7cb79_0_RIGHT_11 1 - TGCCAAGAGTATCAGGGACTCCA +NC_044932.1 850 875 17a7cb79_1_LEFT_0 2 + AACATATTGAACATCCTGGCAACGT +NC_044932.1 851 875 17a7cb79_1_LEFT_1 2 + ACATCCTCAACATCTTGGCCTCAT +NC_044932.1 849 875 17a7cb79_1_LEFT_2 2 + CAACATCATCAACATCCTGGCTTCAT +NC_044932.1 845 875 17a7cb79_1_LEFT_3 2 + CACTGAACATTCTTAATATACTGGCAACCT +NC_044932.1 852 875 17a7cb79_1_LEFT_4 2 + CATCTTGAACATCCTGGCAACGT +NC_044932.1 845 875 17a7cb79_1_LEFT_5 2 + CATTAAACATATTGAATATCCTGGCAACGT +NC_044932.1 845 875 17a7cb79_1_LEFT_6 2 + CTCTCAACATCCTTAATATTCTGGCTACAT +NC_044932.1 845 875 17a7cb79_1_LEFT_7 2 + CTCTTAACATCCTTAACATTCTGGCTACAT +NC_044932.1 853 875 17a7cb79_1_LEFT_8 2 + CTGCTACACTTGCTTGCGTCAT +NC_044932.1 855 875 17a7cb79_1_LEFT_9 2 + GCTGCACTTGCTCGCATCAT +NC_044932.1 846 875 17a7cb79_1_LEFT_10 2 + TCTTAACATCCTCAACATCTTAGCCTCAT +NC_044932.1 848 875 17a7cb79_1_LEFT_11 2 + TGAACATATTGAATATCCTGGCAACGT +NC_044932.1 1724 1754 17a7cb79_1_RIGHT_0 2 - ACACTTTTCCTTTGTTTTCAATCCTATCAC +NC_044932.1 1724 1752 17a7cb79_1_RIGHT_1 2 - ACCTTTCCTTTATTCTCAATCCTGTCAC +NC_044932.1 1724 1752 17a7cb79_1_RIGHT_2 2 - ACTTTACCTTTGTTCTCAATCCTGTCAC +NC_044932.1 1724 1752 17a7cb79_1_RIGHT_3 2 - ACTTTCCCTTTGTTCTCAATTCTGTCAC +NC_044932.1 1724 1757 17a7cb79_1_RIGHT_4 2 - CAAAAACTTTTCCCTTATTTTCAATTCTGTCAC +NC_044932.1 1724 1751 17a7cb79_1_RIGHT_5 2 - CCTTTCCTTTGTTCTCAATCCTGTCAC +NC_044932.1 1724 1753 17a7cb79_1_RIGHT_6 2 - GACCTTTCCTTTATTTTCAATCCTGTCAC +NC_044932.1 1724 1753 17a7cb79_1_RIGHT_7 2 - GACTTTTCCTTTGTTCTCAATTCTGTCAC +NC_044932.1 1724 1751 17a7cb79_1_RIGHT_8 2 - TCTTCCCCTTGTTCTCAATCCTATCAC +NC_044932.1 1349 1372 17a7cb79_2_LEFT_0 1 + AACTCTCAACCAAGTCTGCCTCA +NC_044932.1 1348 1372 17a7cb79_2_LEFT_1 1 + AAGCTTTCAACCAAGTCTGCTTCA +NC_044932.1 1350 1372 17a7cb79_2_LEFT_2 1 + ACTGTCAACCAAATCGGCGTCA +NC_044932.1 1350 1372 17a7cb79_2_LEFT_3 1 + ACTTTCCACCAAGTCTGCCTCT +NC_044932.1 1345 1372 17a7cb79_2_LEFT_4 1 + AGAAAACTCTCAACCAAATCTGCTTCA +NC_044932.1 1345 1372 17a7cb79_2_LEFT_5 1 + AGAAGATTGTCCACAAAATCTGCATCC +NC_044932.1 1348 1372 17a7cb79_2_LEFT_6 1 + AGGTTGTCCACAAAATCTGCATCC +NC_044932.1 1346 1372 17a7cb79_2_LEFT_7 1 + GAAAACTCTCAACCAAGTCTGCTTCA +NC_044932.1 2221 2246 17a7cb79_2_RIGHT_0 1 - CTTGTTTGAGTTCTGGCATGGTTCT +NC_044932.1 2221 2247 17a7cb79_2_RIGHT_1 1 - GCAACTTTCAGATCTTCCAAGGTCTT +NC_044932.1 2221 2243 17a7cb79_2_RIGHT_2 1 - GCTTCAGCTCATCCAGGGTCTT +NC_044932.1 2221 2247 17a7cb79_2_RIGHT_3 1 - GCTTGTTTAAGTTCTGGCATGGTTTT +NC_044932.1 2221 2247 17a7cb79_2_RIGHT_4 1 - GCTTGTTTGAGGTCTGACATAGTCTT +NC_044932.1 2221 2247 17a7cb79_2_RIGHT_5 1 - GCTTGTTTGAGGTCTGACATGGTCTT +NC_044932.1 2221 2248 17a7cb79_2_RIGHT_6 1 - TGCTTGTTTGAGTTCTTCCATGGTTTT +NC_044932.1 2159 2186 17a7cb79_3_LEFT_0 2 + CTGCTGAAAACAAATATGGGTTGATGG +NC_044932.1 2161 2186 17a7cb79_3_LEFT_1 2 + GCAGACAACAAGTATGGGATCATGG +NC_044932.1 2158 2186 17a7cb79_3_LEFT_2 2 + GCAGCTGAAAACAAATATGGTCTTATGG +NC_044932.1 2161 2186 17a7cb79_3_LEFT_3 2 + GCTGAAAACAAATACGGGTTGATGG +NC_044932.1 2161 2186 17a7cb79_3_LEFT_4 2 + GCTGAAAACAAGTATGGGCTGATGG +NC_044932.1 2158 2186 17a7cb79_3_LEFT_5 2 + GCTGCTGAAAACAAATATGGGTTGATAG +NC_044932.1 2160 2186 17a7cb79_3_LEFT_6 2 + TGCAGAAAACAAGTATGGATTGGTGG +NC_044932.1 2157 2186 17a7cb79_3_LEFT_7 2 + TGCTGCTGAAAATAAATATGGATTGATGG +NC_044932.1 3027 3048 17a7cb79_3_RIGHT_0 2 - ACTATCCGCGACCAGATGCTT +NC_044932.1 3027 3053 17a7cb79_3_RIGHT_1 2 - AGCTCACAATCCTAGACCATATGCTT +NC_044932.1 3027 3053 17a7cb79_3_RIGHT_2 2 - AGTTGACTATCCTTGACCAGATGCTT +NC_044932.1 3027 3053 17a7cb79_3_RIGHT_3 2 - AGTTGACTATTCGTGACCAAATGCTT +NC_044932.1 3027 3053 17a7cb79_3_RIGHT_4 2 - AGTTGACTATTCTCGACCAGATGCTT +NC_044932.1 3027 3056 17a7cb79_3_RIGHT_5 2 - CAAAACTCACAATCCTAGACCATATGCTT +NC_044932.1 3027 3056 17a7cb79_3_RIGHT_6 2 - CAAAGTTGACTATCCTAGACCAAACACTC +NC_044932.1 3027 3052 17a7cb79_3_RIGHT_7 2 - TGGGACTATTCTTGACCAGACACTC +NC_044932.1 3027 3051 17a7cb79_3_RIGHT_8 2 - TTGACTATCCTCGACCAGATGCTT +NC_044932.1 2930 2958 17a7cb79_4_LEFT_0 1 + AAAGAAACCCTGATGACTTCAAACCTAA +NC_044932.1 2935 2958 17a7cb79_4_LEFT_1 1 + AACCCAGACGACTTCAAGCCTAA +NC_044932.1 2929 2958 17a7cb79_4_LEFT_2 1 + AAGAGGAATCCAGATGACTTTAAACCAAA +NC_044932.1 2936 2958 17a7cb79_4_LEFT_3 1 + ACCCAGAAGACTTCAAGCCCAA +NC_044932.1 2936 2958 17a7cb79_4_LEFT_4 1 + ACCCAGATGACTTCAAGCCCAA +NC_044932.1 2932 2958 17a7cb79_4_LEFT_5 1 + AGAAACCCAGATGACTTCAAGCCTAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_6 1 + GAAACCCAGAAGACTTCAAACCCAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_7 1 + GAAACCCAGATGACTTCAAACCCAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_8 1 + GAAACCCTGATGACTTCAAACCCAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_9 1 + GAAGACCAGACGATTTTCAACCGAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_10 1 + GGAACCCAGAAGACTTCAAGCCTAA +NC_044932.1 2933 2958 17a7cb79_4_LEFT_11 1 + GGAGACCAGACGATTTTCAACCAAA +NC_044932.1 3807 3835 17a7cb79_4_RIGHT_0 1 - CATCACTGTCTTCTTGGCTTCTTCTAAG +NC_044932.1 3807 3835 17a7cb79_4_RIGHT_1 1 - GATTATAGTCTTCTTGGCAGCTTCTAGC +NC_044932.1 3807 3836 17a7cb79_4_RIGHT_2 1 - TCATCACTGTCTTTTTGGCTTCTTCTAAG +NC_044932.1 3807 3833 17a7cb79_4_RIGHT_3 1 - TGATGGTCTTCTTGGCAGCTTCTAAT +NC_044932.1 3807 3833 17a7cb79_4_RIGHT_4 1 - TGATGGTTTTCTTGGCAGCTTCTAAC +NC_044932.1 3807 3830 17a7cb79_4_RIGHT_5 1 - TGGTTTGTTTGGCTGCTTCCAAT +NC_044932.1 3807 3830 17a7cb79_4_RIGHT_6 1 - TGGTTTTCTTGGCAGCTTCCAAC +NC_044932.1 3807 3837 17a7cb79_4_RIGHT_7 1 - TTGATGATAGTCTTCTTTGCTGACTCTAAG +NC_044932.1 3743 3766 17a7cb79_5_LEFT_0 2 + AAGTCATGAGGGACCAGCTGAAA +NC_044932.1 3741 3766 17a7cb79_5_LEFT_1 2 + ACAAGTTATGAGGGACCAGCTGAAG +NC_044932.1 3739 3766 17a7cb79_5_LEFT_2 2 + CAACAAGTTATGAGGGACCAGCTAAAG +NC_044932.1 3741 3766 17a7cb79_5_LEFT_3 2 + GCAAGTCATGAGAGACCAGTTGAGA +NC_044932.1 3741 3766 17a7cb79_5_LEFT_4 2 + GCAAGTCATGAGGGAACAGTTGAAG +NC_044932.1 3741 3766 17a7cb79_5_LEFT_5 2 + GCAAGTCATGAGGGACCAGCTAAAA +NC_044932.1 3741 3766 17a7cb79_5_LEFT_6 2 + GCAGGTAATGAGAGACCAGTTGAAG +NC_044932.1 3741 3766 17a7cb79_5_LEFT_7 2 + GCAGGTGATGAGAGACCAGTTGAAG +NC_044932.1 3737 3766 17a7cb79_5_LEFT_8 2 + TGCAACAAGTTATGAGAGACCAACTTAAA +NC_044932.1 4563 4588 17a7cb79_5_RIGHT_0 2 - ACCGTAGAATGAGAAACAGGAGTGG +NC_044932.1 4563 4589 17a7cb79_5_RIGHT_1 2 - CACCATAGAAGGAGAAAAGGGAGTTG +NC_044932.1 4563 4592 17a7cb79_5_RIGHT_2 2 - CATCACCGTAAAATGAGAACATGGAATTT +NC_044932.1 4563 4595 17a7cb79_5_RIGHT_3 2 - CATCATCACCATAAAAAGAGAAGAGGGAATTA +NC_044932.1 4563 4593 17a7cb79_5_RIGHT_4 2 - TCATCACCATAAAAAGAGAAGAGGGAGTTA +NC_044932.1 4563 4593 17a7cb79_5_RIGHT_5 2 - TCATCACCATAGAAAGAGTACATGGAGTTA +NC_044932.1 4563 4593 17a7cb79_5_RIGHT_6 2 - TCATCACCATAGAAGGAGAAGAGAGAATTA +NC_044932.1 4331 4360 17a7cb79_6_LEFT_0 1 + CAGCACTAGAAATCATGGTTAAGTTCTCT +NC_044932.1 4330 4360 17a7cb79_6_LEFT_1 1 + GCAGCTCTAGAAATCATGGTTAAATTCTCC +NC_044932.1 4333 4360 17a7cb79_6_LEFT_2 1 + GCCCTGGAAATAATGGTCAAATTCTCA +NC_044932.1 4333 4360 17a7cb79_6_LEFT_3 1 + GCCTTGGAAATCATGGTCAGATTCTCT +NC_044932.1 4330 4360 17a7cb79_6_LEFT_4 1 + GCTGCTCTAGAAATCATGGTTAAATTCTCC +NC_044932.1 4338 4360 17a7cb79_6_LEFT_5 1 + GGAAGTGATGGTGCGGTTCTCT +NC_044932.1 4332 4360 17a7cb79_6_LEFT_6 1 + GGCACTTGAAATCATGGTGAGATTTTCT +NC_044932.1 5072 5096 17a7cb79_6_RIGHT_0 1 - GTCATTCGACGCCATCTTCATTCA +NC_044932.1 5072 5095 17a7cb79_6_RIGHT_1 1 - TCACTCGACGCCATCTTCATTCA +NC_044932.1 4936 4968 17a7cb79_7_LEFT_0 2 + AGCAAATTAGTCATATCTGAACTTAAAGAGGG +NC_044932.1 4940 4968 17a7cb79_7_LEFT_1 2 + AGTTAGTCATTGCAGAGCTAAAAGAAGG +NC_044932.1 4938 4968 17a7cb79_7_LEFT_2 2 + CAAATTAGTCATTGCAGAGCTAAAAGAAGG +NC_044932.1 4937 4968 17a7cb79_7_LEFT_3 2 + GTAAATTGGTCATAACTGAACTCAAAGAAGG +NC_044932.1 4943 4968 17a7cb79_7_LEFT_4 2 + TGGTCATTGCAGAGCTAAAAGAAGG +NC_044932.1 4942 4968 17a7cb79_7_LEFT_5 2 + TTAGTCATTGCAGAGTTGAAGGAAGG +NC_044932.1 5807 5831 17a7cb79_7_RIGHT_0 2 - ACCCGTGAACAACTTTTCCAAAGG +NC_044932.1 5807 5830 17a7cb79_7_RIGHT_1 2 - CCCGTGAACAGCTTTTCCAAAGG +NC_044932.1 5807 5829 17a7cb79_7_RIGHT_2 2 - CGGTGAAAAGCGAATCGATGGG +NC_044932.1 5807 5832 17a7cb79_7_RIGHT_3 2 - GACCCGTGAACAATTTTTCCAAAGG +NC_044932.1 5807 5831 17a7cb79_7_RIGHT_4 2 - GCCCGTGAACAACTTTTCCAAAGG +NC_044932.1 5807 5831 17a7cb79_7_RIGHT_5 2 - GCTGGTGTACATCTGGTCTATGGA +NC_044932.1 5807 5832 17a7cb79_7_RIGHT_6 2 - GGCCTGTGAACAACTTTTCCAAAGG +NC_044932.1 5807 5833 17a7cb79_7_RIGHT_7 2 - GGGTCAGTGTACAACATGTCTATCGG +NC_044932.1 5689 5718 17a7cb79_8_LEFT_0 1 + ACCATCCCCCGATTTTGATTTCATATTTT +NC_044932.1 5690 5718 17a7cb79_8_LEFT_1 1 + CCATCCCCCGATTTTGACTTCATATTTC +NC_044932.1 5690 5718 17a7cb79_8_LEFT_2 1 + CCATCCCCCGATTTTGATTTCATATTTC +NC_044932.1 5690 5718 17a7cb79_8_LEFT_3 1 + CCCTCCCCTGATTTTGATTTCACATATC +NC_044932.1 5689 5718 17a7cb79_8_LEFT_4 1 + GCCGTCCCCTGATTTTGATTTTATATTTT +NC_044932.1 5689 5718 17a7cb79_8_LEFT_5 1 + GCCTACTCCTGATTTTGAGTTCACTTATT +NC_044932.1 5688 5718 17a7cb79_8_LEFT_6 1 + GGCCATCCCCTGATTTTGATTTTATATTTT +NC_044932.1 5693 5718 17a7cb79_8_LEFT_7 1 + TCCCCTGACTTTGACTTCACATACC +NC_044932.1 6558 6581 17a7cb79_8_RIGHT_0 1 - AGCCACTGTGACATAGCCTGATT +NC_044932.1 6558 6581 17a7cb79_8_RIGHT_1 1 - CGAGACTGTCATGAAACCAGCTC +NC_044932.1 6558 6583 17a7cb79_8_RIGHT_2 1 - GCTGCAATTGTGAGGAAACCTTGTT +NC_044932.1 6558 6584 17a7cb79_8_RIGHT_3 1 - GTGAGCCACAGTAATGTAACCAGATC +NC_044932.1 6558 6583 17a7cb79_8_RIGHT_4 1 - TGAGCCACTGTAACATAGCCTGATT +NC_044932.1 6558 6581 17a7cb79_8_RIGHT_5 1 - TGCCACAGTGATGAACCCTTCTC \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta b/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta new file mode 100644 index 0000000..efb9f0b --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta @@ -0,0 +1,127 @@ +>NC_044932.1 +GTGAATGAAGATGGCGTCTAACGACGCTGCCACTGCGACCGCTGGCACAACCAGCTCAAA +CAGTGAAATTCACAACAAAGATGTTAGTAACACACAAAACATCTTTGCCAACATGACTGT +TGGCATAAAGAGGGCTCTGGGGGCGAGGCCAAAACAACCTCCCCCCAAGCCCCCTTCCAC +AAAGAAGGAGGACAAAACCACCCTTCCTCCAATACCCCCCCCACCCCCCAATGGTGAGGA +CATTGTCATCACGTACAACAAGCAAGATGACAAGGTCAGTGGAGTTCCCATCGTTTCCAC +TGTTGAGACATCCCCTCTGCATGACACCGCATACAGTGTCCCTCCCCTGGATCAAAGGGA +AAAGGTTGATGCAAAGGAGCCCCTAACAGGTTCAATACTCGAGATGTGGGATGGTGAGAT +CTACCACTACGGCCTCTATGTGGAGAAGGGTTTGGTCCTCGGCGTGCACAAGCCACCATC +CGCCTTGAGCCTGGCACGCATAGAGTTAACCCCCCTCTCTCTCTACTGGAGGACAGTCTA +TACACCACCCTACCTAGTGGCTCCAGACACCCTCAAGAAACTCCACGGGGAATCATTCCC +CTACACGGCTTTTGACAACAACTGCTACACCTTTTGCTGTTGGGTCTTAGACCTAAACGA +CTCATGGCTTAATAGGAAATGTGTATCAAGGACTACTGGCTTCTACAGACCCTACCAGGA +TTGGAATAGAAAACCCCTACCAACCATGGATGAGAGTAAACTCAAAAAGGTGGCCAATGT +GTTTCTGTGTGGTCTATCCAGCTTATTCACCAGGCCTATTAAGGACCTCGTAGGTAGACT +CAAACCATTGAACATCCTCAACATTGTCACCAACTGTGATTGGACTTTCCCCGGTGTTGT +AGAAGCTCTCATCCTACTGGCAGAACTCTTTGGCATTTTCTGGACCCCACCGGACATATC +CGCTTTCGTAGCCTCCCTGTTGGGCGACTACGAGATGCAAGGGCCTGAGGACATTGCAAC +CGAGATCGTGCCAGTTGTTCTCGGTGGTATTGGCATGGTCCTTGGTTTCACCAAAGAGAG +GATTGGCCGACTACTGAGTTCAGCTGCATCATCACTCAGGGCATGCAAGGAGATTGGCAA +CTACGGGATAGAGGTGGTCAAATTGGTGATGAAATGGTTCTTTCCCACCAAAAATGAAGT +GAATGAAATGGAGATGGTTAGGGCGATAGAAGATGCGGTACTTGACTTCGAGGCAATAGA +AAACAACCATATGACAGCCCTGCTCAAAGACAAGAACAGCCTAGCCACTTTCCTCAGAGC +ACTAGACATGGAGGAGGAGAAAGCGCGGAAATTGTCAACCAAATCCGCGTCACCAGACAT +AATCGGTACCATAAACGCCCTTCTAGCCAGGCTCGCCGCCGCTAGATCCCTAGTCCACAG +GGCCAAGGAAGAGATGTCATCCAGGATGCGTCCTGTTGTCATTATGATTTCTGGCCGACC +CGGAATAGGGAAGACACACCTTGCACGCGACCTGGCTAAGAAGATGGCAGCAACCCTCTC +AGGTGACCAGAGAGTGGGCCTTGTACCAAGAAACGGTGTCGATCACTGGGATGCATACAA +AGGAGAGAGAATCGTGCTCTGGGATGATTATGGCATGAGCAACCCCGTGTCTGATGCCCT +ACGGCTCCAAGAACTTGCCGACACATGCCCCCTAACACTTAATTGTGACAGGATAGAGAA +CAAAGGGAAAGTCTTTGATAGTGATACCATAATCATAACAACCAATCTGTCAAACCCAGC +TCCACTTGATTATGTAAACTTTGAAGCTTGCTCCCGCCGCATTGACTTCCTCGTCTATGC +GGATTCCCCTGCAGTTGACAAAGCAAAGAGGGATTTCCCTGGTCAACCAGACATGTGGAA +GGATGCATTCAAATCAGACTTCTCCCACATAAAATTACAATTGGCACCACAAGGAGGTTT +CGACAAAAATGGCAACACCCCACATGGTAAAGGAGTCATGAAGACCCTAACCACACACTC +TCTCATAGCCAGGGCTACTGGTTTGTTGCATGAGAGACTGGATGAATTTGATCTACAAGG +TCCAGAATTGCCCATATACAATTTTGACCAGAACAAGGTGGCTTCCTTTAGGAAGCTGGC +TGCAGACAACAAGTATGGTCTCATGGAAACCATAAAAGCAGGTAACAAGTTGAAGGAAGT +CAAGACACTGGATCAATTCAAAGAGGCCGTGAGGGACATACGCATAAAGCCTTGCAGAAT +AATCTACAATTCCACAGCTTATGACCTGGAGTCTAACGGCTCAGGGAAGGTCACTGTCAA +GAAAGTAGGAGACCAAAAAGTCCAAGCCAACAATGAGCTCTACTCTGCCCTCAACAACCT +GCGTAGAGCCAGGATTAGATACTATGTCAAGTGTTTCCAAGAAATGATCTACTCACTCCT +CCAAATAGCCGGTGCGGCTTTTGTCACATCGAGAATGACACAAAGGATGAATGTTGGCAA +GCTGTGGACCAAGCCGGAGAGAACTATGAAGGCCCCCACGGAGCCCCCTGCTCCTCCAAT +TGATGATTGGACCATAAACCCAGTTGACACAATTCCGGAAGGTAAGAAAGGCAAGAACAA +AAGTGGTAGAGGGAAGAAACACACTGCCTTCTCCAGCAAAGGTCTCAGTGATGAGGAGTA +CGATGAATACAAGAGGATCAGAGAGGAACGTCAAGGAAGGTACTCCATAGAAGAATACTT +GCAGGACAGAGACCGCTATTATGAAGAATTGGCTATAGCCAAAGCAACAGAGGAAAATTT +CTGTGAAGAGGAAGAAGTCAAAATAAGGCAAAGGATCTTCAGGCCAACCAAGAAACAACG +CAGGGAAGAAAGAGCCACCCTGGGACTGGTCACAGGCAGTGAAATCAGGAAAAGGAACCC +AGATGACTTCAAACCAAAGGGAAAGCTGTGGGCTGATGATGACCGTAGCGTTAACTACAA +TGAAAGGATAGATTTTGAAGCCCCCCCTAGTCTATGGTCTAGAATAGTTAATTTTGGTTC +AGGTTGGGGTTTCTGGGTCTCTTCCAACCTCTTCATCACCTCCACACATGTTGTTCCACC +AGGCATGACGGAGGCTTTTGGAGTCCCAACAAGCCAAATCCAAATTCACAGGAGTGGGGA +ATTTTGCAAGATGAGATTCCCCAAAGCCATCAGACCTGATGTCTCTGGAATGATTCTTGA +GGAAGGCGCACCCGAAGGGACGGTGGTGACCATACTGATCAAGAGAACCACTGGAGAGCT +CATGCCACTGGCAGCCCGTATGGGCACCCATGCCACCATGAAGATACAGGGGAGGATGAT +TGGGGGCCAAATGGGGATGCTTCTCACAGGGTCCAATGCCAAAAATATGGACCTTGGTAC +CGTCCCCGGAGATTGTGGCTGTCCTTATGTCTACAAAAGGGGTAATGATTGGGTTGTCAT +TGGGGTGCACACCGCCGCTGCAAGGGGTGGCAACACGGTGATATGTGCAACTCAGGGACC +AGATGGAGAAGCCACACTTGAGGGAGGAGACAATCACGGTACTTACTGTGGCGCACCAAT +CATGGGACCAGGAAATGCCCCAAAACTCAGCACCAAAACCAAATTCTGGAGATCTTCCAA +TGCCCCACTTCCCCCTGGCACATATGAACCTGCCTATCTTGGTGGTAGAGACCCCAGGGT +TAAAGGTGGCCCATCACTACAACAAGTCATGAGAGACCAACTCAAACCCTTCACCGCTCC +CCGTGGGAAGCCGCCAAGGCCGGCAGTTCTAGAGGCCGCTAAGGAGACCATCTGTAGCGT +ACTTGAGCAAACCATAGAACCACCCCAAAAGTGGTCCTATGCGCAAGCCTGTGCTTCCCT +GGACAAGACAACATCAAGTGGCTACCCCCACCACAAGAAGAAGAATGATAACTGGAATGG +AGAGTCTTTCACTGGCGTCCTGGCTGACCAGGCATCAAAAGCAAATCTCATGTTTGAGCA +AGGGAAACACATGCAGCCTGTGTATACAGCTGCACTTAAGGATGAACTTGTCAAGACCAG +TAAGATCTATGAAACCATCAAGAAAAGGCTCTTGTGGGGTTCTGACCTGGGCACGATGAT +TCGTTGTGCAAGATCATTTGGGGGTCTCATGGATGAGATGAAGGCTAACTGTGTGAGATT +GCCCATCAGGGTCGGGATGAACATGAATGAAGATGGACCTATAATCTTTGAGAAACATGC +AAAATATAGATATCATTATGATGCTGATTATTCCAGGTGGGACTCAACCCAACAGAGACA +CATACTGGGTGTTGCACTTGACATCATGGTTAAATTCTCAGCTGAACCAGAACTATCACA +AGTGGTGTCTGAGGATCTTCTGTCACCCAGTGTCGTGGATGTTGGTGACTTTAAGATCAC +AATAAACGAGGGCCTTCCCTCAGGTGTCCCATGCACATCTCAATGGAACTCAATTGCTCA +TTGGCTTCTAACACTGTGTGCCATGTCGGAAGTCTCTGGACTCTCCCCCGACGTGGTACA +ATCAAATTCATGTTTCTCCTTCTATGGGGATGATGAGATAGTCAGCACAGACATAAAGTT +GGACCCACAAAAACTGACAGACAAACTGAGAGAGTATGGGCTCATTCCAACCCGACCTGA +TAAAACAGAGGGGCCACTCATAATTAGAGAGAGCTTAGAGGGTCTGACGTTCCTCAGGAG +AGATATATGTAGGGACCCAGTCGGCTGGTATGGTAAGCTTGACCAGTCCTCAATCATGAG +ACAACTGTATTGGACCAAAGGACCCAACCATGAGGATCCCAATGAAACAATGATTCCACA +TTCTCAAAGACCAATACAATTAATGTCCCTTCTCGGTGAGGCTGCCCTGCATGGACCAAC +ATTTTACAAGAAAGTTAGCAAATTGGTAATCACTGAACTCAAAGAAGGTGGAATGGATTT +TTACGTGCCCAGACAAGAACCAATGTACAGGTGGATGAGATTCTCCGACTTGAGCACGTG +GGAGGGTGATCGCAATCTTGCTCCCGAAGGTGTGAATGAAGATGGCGTCGAATGACGCCG +CTCCATCTAATGATGGTGCTGCCAACCTCGTTCCAGAGGCCAACTCAGAGGCATTGGCAT +TGGAACCGGTGGCAGGTGGGGCTATTGCCGCACCTCTCACTGGTCAAACAAATATAATTG +ACCCCTGGATTATGAAAAACTTTGTGCAGGCACCTAATGGTGAATTCACAATATCCCCAA +GAAATTCCCCTGGAGAAATTTTGTTAAACCTTGAGTTAGGACCAGAAATTAATCCTTTTC +TTGCCCACTTATCTAGGATGTATAATGGGTTTGCTGGGGGAGTGGAGGTACAGGTGCTCA +TGGCTGGCAATGCATTCACTGCAGGAAAGGTCATATTTGCGGCTGTGCCGCCTCATTTCC +CAGTAGAAAACATTAGTCCCCCACAGATAACTATGTTCCCCCACATAATAGTTGATGTTA +GGACTCTTGAACCAATTTTTATCCCTGTCCCAGATGTGAGAAATAATTTCTTTCATTACA +ATCAAATGAATGATCCAAAGATGAGGTTAATTGCTATGCTGTACACCCCCTTAAGATCAA +ATGGTTCTTCTGATGATGTTTTCACTGTGTCTTGTAGAGTTCTCACCAGACCCACCCCTG +ATTTTGAGTTCAATTATTTGGTACCACCCACTGTCGAGTCAAGGACAAAACCCTTCAGTG +TGCCCATCCTAACAATTGGAGAGATGACAAATTCTAGGTTCCCATTACCTATTGACATGC +TGTACACCAGCCCGACTGACAGTTTGGTCGTCCAACCTCAAAATGGCAGGTGCACAATTG +AAGGTGAATTGCAAGGTACAACTCAATTGGTGACTCCAAACATTTGTTCCCTTCGAGGCG +CAATCACCGGGCATGAAGGCAATGATGACAACCACAAATGGCACATGACAGTCACGAGCC +CTAATGGTGCCGCCTTTGACCCAACAGAGGATGTGCCTGCCCCCCTGGGCACTCCAGATT +TCATAGCTGACATATATGGGGTTCTCTCCCAGAGAAATAGATCCATCGAATCTGGCCAGA +GTGGTCCTGCAAATAGATCTCATGAGGCTGTTGTCTCCACACGGAGTCCTAAATTTACCC +CTAAATTAGGTTCAGTAATGATTGCCACTTGGAACACCAATGATATTGAACTTGAGCCCA +CCAAATTCACACCTATAGGTCTTGAGAATCCCGGCCCCTTTCAACAATGGCGGCTACCAA +ATTACTCAGGAGCCCTAACACTCAACATGGGACTTGCATCATCTGTATTCCCAACATACC +CTGGTGAACAAATTCTTTTCTTCCGTTCATACATTCCCCTCAAAGGTGGCTTTGGAAACA +CAGCCATAGATTGCCTTGTACCACAGGAATGGGTCCAGCACTTCTATCAGGAATCAGCCC +CTGCACAATCAGATGTGGCACTACTTAGGTATGTGAACCCTGAGACAGGACGTGTCCTGT +TTGAGGCCAAACTGCACAGACAAGGTTTCCTTACAGTTGCTAGATCAGGTGAAAGTCCCA +TCAATGTTCCTGCCAACGGTTATTTCAGATTTGACTCTTGGGTTAACCAATTCTACTCTC +TTGCCCCCATGGGAACTGGGAACGGGCGCAGAAGGTTTCAGTAATGGCAGGAGCTTTCTT +AGCAGGATTGGCTGGTGACATAGTCACAAATAGTGTAGGTTCTTTAGTTAATGCAGGAGC +TAGTGCAATCAACCAGAAAATTGATTTTGAAAATAATAAATACCTTCAAGGAGAATCTTT +TAAACATGATAAAGAAATGCTGAATGCACAAATTGAGGCTACAAAGAAATTGCAGATGGA +TATGATAAACATCAAACAAGGAGTTCTTTCAGCTGGGGGGTTCTCACCCACTGATGCGGC +TCGTGGAGCCATCAACGCTCCTATGACAAAGGTTCTGGATTGGAATGGGACTAGATACTG +GGCACCCAATGCTCCTGTAACAACATCACTGTCTGGTGGCTTCACTGGGCAGGCCGTACA +CAGGCCCACACCAAATTTTGGCAGCAATCAAATCCCAAAGACAATGTCCAGTAGGGGAAC +ATCTGTGAGATCAAATTCAACTCAATTGACCAGTCTGGGTTCCCAATCTTCTGGTTCCTC +CCGAAGCAGTGTGACTACCGTGAGTAGCTCATTGCCTTCAACCAACAGGACTAGAGAGTG +GGTGAACCAACAAAATCTCAATTTGGAACCTCACCTACCTGGATCACTGAGGACAGCCTT +TGTCACTCCACCATCGAGCACCGCTTCCAGCTCAGGCACAGTCTCAACCGTGCCCAAAGG +TGTTTTGGACTCCTGGACATCTGCATTCAACACACGCAGACAGCCGCTGTTTGCACACCT +TCGTAGAAGGGGGGAGTCAAATGTTTAGTGAAAAGATTATTTAATTAGAACTAATTTCAA +TTTGGACTAATTCGGAAAATCTTTT diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.html b/primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.html new file mode 100644 index 0000000..32c89c9 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.html @@ -0,0 +1,14 @@ + + + +
+
+ + \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.png b/primerschemes/norovirus-gii/800/v1.0.0/work/NC_044932.1.png new file mode 100644 index 0000000000000000000000000000000000000000..0e68a6e9c9db3bf69f9a7d5da10b4e1dd0ee99b6 GIT binary patch literal 193855 zcmeFacUV-*7ALy90ZA%IR8eS@ppuRvppqH^1rZ4fNCrugB}?qa00<(81jz-^_gP(?8r)_ujRuR;^m`x2m5h-nxE>;y48aL5E~z zq?94(01|?To{${?pKQtRzJnkHBr7Fx=b_HR5P4MeYTw?nx$y;cqnCkF)Sb$m!^(0; z=;Aw%t4Nc}=V;(neS1aC(&96!H#$@ABu%nbjFe(Ed7j-3k}=fh2sga2*W+$jebcxk z6)%jtY}ag}leRZM;yvOJZC8e+J-zkXu6_>ud(KBpjf7zT@ZTFB;(9WKw7pOP-9Oy1 z|7a~aHS!@V0u8~*{{BB?8@R)FG1OM#A8y!x5($k7{Bsu&T$&RJoh{U?Ct>|Jcfp?Y z{NpIV7j)4OEN;f?EaQ`Za~CnS4$;3Er=mTaIPhIjycYF8O&9bH2y*D}Y4PpF|6dV= z?ooLW7G4$0DOk62b}W3cOUuOM?s#I#rZ-X+cQE9P zeeFc}f!P}WAQ4`*{p?S2wZ;>tmQJ!bE_XQzxHdN&R*i){#H?vG6(49qL=>j0D4D)@vzQd2!OCUUwlWEzxq?QYgbtVOu`Y zJRu<=$BBS{dFW)}okdQOTf3{5idJK37ox1*AEqqxa=9sca^lOYI)pGtT8zH z6SvQpf#pnfta(`a*P3fzePaV%o`3S#wq@&mfOuZ)qSK>8Oc!dI3o&rl?J6M*4prQn zIMvLbbz#0MsYu&n<4ErE0rRP5@$F77$HrN;-kvVIrn&m$ckc!TwWf<4hpK7@raO## zbH&B0J#vSP3-T(qhgkR;F){>QXXo(s*{+Tl!ZdyE@~yHgc08Xx)u648m5FOWLC?(j zjge=uy=Gi|)@dbMo?TtxJUNDCg9@QLGv4M7&+Ou`wy6> z8JD=MW%mqwj3iEX_j2ty`LoBuGAsE4a#&LHyrP%9-51JFw`7E8CE41i|*+DPv>@dRy&gS*8!&k5s#DFgZCXXxJK*+prPY$8vaB)G2pa0d0Q~ zZ9j2-9tEH9Cm%na>?AfSg&%#dkg}{he?jOGr|*xWVdnxevQM++>FGaZr2Pl5htv&n z=q+kegmMq{s5f=%*iCwQ51O@{wwzX;GHWVOnR$D{;ZS=x-%-cE-ibh? zwb0NhP9xSInA4cY{eX-?*e;cDgU-Ws(E*bl%Z0ep8x6ZD{Jh0=RwY<{O(3N(Q)N+x zU0nhNRM!+rjhnXXbNlf3lTu?$TEriyEZSX}6DMNZA`cYTbx!gx!i+fXU{U&bY=L{F zq<{xy@(U3T*b_CrAKpqv=Lbao-9@$@&p!#Js0hc91m+Fz^==$>$P5Vy=~K97ao=ci zaszPlU2W~?A%~%3x#_vx8^_%fEw>*#SbPN1CPDXRo?L3_z+B@(mv>smL>BTmY2Yz_ zr&~KiZ2snxvhcuAiIf zDkQuZ7&{GizC4@QP(I~@WYJmo%}_}2#iN%MfcbjAz}LTN;Y_wb(^>xUk`efF!H{{n412Zy&P z%`jPKb?*i&4q3LAdvvF~JGIWQnV;S)w&kW_H9Z=CAZ~bCTT!#9RV;c%+R7rF^>Kgk zhqThv+go`<`|tS8aF4#aobPQRMYdoXr2 zDS3e*!i4Ofmh{a75;DXiSG$^BT8qZ5aob3b-G=A|A6;yp;XM5~!73~OUo_-Y*_XRQ zQ5msQLdxPk%v-c*<%;_HQJ%2vBj1xX@ z-CgIlglti}1*8PC64!Nm(FRSd`4$nW zORC&aczmVfRF%*qVff|y>-`n@o$M;RItBd`cH1GLU;HNKry6c$uJ>rh{oavdZJLtmMf33IrG6sMRq?& zZnV#1`}c-dA1sQ%;pHfy_axF|BZ<~dTxn%AWqKe}GOQls zzHjQidEcBBoj1_gENWw)m6W=Nm$i`fFpEopg1$seM9j5-;nZo~w#*pNFW7C_S-qk8 zP9be@FJ`;y<^a&Jw*0h2(th7IQB;+`=>(NpS!~T z+)dVD6KQ*P!O^Q>nzq){7YWUNOkz&&fvO%at(k6S=a1Zb5X}%&6Mqh45LI<0E&1>(;JhV5ZBk`^{FCeLqf8~S2wmJ)J5+e$7t zkuI2_F3kq163ML4GG33e4abx;bQk1x6@K+{jocxYp}BaC#kJHjW4X`~*n@)3I~{z5 zZB|9Nm&VrNIh$2Iq=6G@;?5&RmLAt?%&pz^T=zEC1{F|j;w0_EYMDg@JK3PvAm_!& zJfO}tS~u~3ndU$Jg=7SJgv?6A9g-zL9#acxw&DdDd$kzMrX=d+K5?Id16wFcz0^yY^gD9LYGS1peDv9e%H7x8k7Ebd^4UU=XOh(815Ltgc%j+ zcY$0qKxCN)_9ebr|4)VcvxIzO4(xhjT!IbMcYjyFB2NibUqaGV>7;dEGK{&G8_gEG zoY8`9PLH+9%7}JaVSQw>gz?>mUVaH<`+SkG-LaB^K)lqOnPTC}pF3M6^ZnG0ie zVN4#r@5SD5Gb4lYa*to$?i?%>P7@Qwb+Cl#q7<^A6)@C+Mbc;srsR@{p$By=k#1-_ zQGm!RKgqg*$L!X$-J9m!QE3=-WlM&W`0FTqgDg^3>~UO5i@2du~^5`H1qKiYoNqX{mva+&qIf5AIR z@v%{Nmvt7j$DC4GW{F3x%B$rp-h#8ZiV>mR$uC-O@*gZ<95Ew=5PaRU3C=S?X`yf# z`6f3ehfe2xAtLbQ)r5r{%#g4{lH1_PIXOIR9)=OhdMO-GTk^EamE~qG6LwR9_d(Rd z-qMYRA=KbR0lWB?P5F`OUPgZ7$>9%N&cdm7w@z5@D~2TEx&dqU7S{7+bHxS`UqWBx zA3bUm+EwrF29w^duyKwLA$A!(T>fEEpZi!*96ybFP`l8ihjYVDT^P+Kk?=7>o4mh^! z;{`+vR|bRf(rnFLJTrQd}#c}vM!uDh6}*ZS;GgQ~7kzBX!r zDD*Bn%-CN=?Y`ZRDdTXUu2Xb(o8asI6Kx!t* zpG3@GG8P#|y)SHT%faGOQ=6~7U^cKW5o*h2$D(ihS;6J@V$ugSMcGm4Shr6P z<#c7GW>l5NT)eREm--w zz)gNo)1o-ll2GYj;pg9zk(M+yq34MTe-YEgD^mIZZ%hlJA#w^$tO1e_+tkc0@z7Y)0e zvTJ@2O^Cri*^g)3U~r#N<{Ua?P)>mOYT`-Tou`Ka6j_i#We-LkEA+ColwQH9Gpfb7 z-dWtU-U%W0rfn&>f}=eJ?2VbFteao!6*eyOGO7`rI|>eYz9BsB(WE%-AC?E)VjfY? zP%)yocssl4uHM&_)sw?Fl9s3a*-T!wNcNd^tVce1H9^$o)Q^2KD8OdTDrhmITo8Na z@^rhVt&Q<+j%rRr^A!=?hE|IEkR$f=##l}4^i@UM(s(|&jJK}p38|kL@GqyLFlwI_ z8#E{pvd?>`Tlq0vLL)7rH^!kLw_CMuIdv=oM0am2V%e=ja_W5>`aAhbLEK}zJjQu8 zWl$Hj=vg);Mp?NU;>KIk7d9N^>X-6T*xE>7b$TFY58tAtn7{F8++rM?);D)W8rs_I zNGPDv)U_#K6?E9Xxxc)&EWU&eOTpZ%TbC~3-p;J+jxgCE7e8Kg?A`X>h^F^aU(uft z8d=v{EO;?!`o#b86ne0YQP;I)17E3Luovx??~)eN^uATBXzvp46>DA3j6qA@1g1P_ z%TQsr$KJe>cXFTCblJlp_et+@s&wnYtffG|#_!sQ5 z&@N|G`-MLdv_j=^*h@g|C&4njU!8DISd5ABGdKz8bD!N(>^YB1NzbHM^oX)`{;% zH3%Cd)J^-bi4SFt#0>QDISzg3E9K`cY+H0)l1)mC8JNJHbSY02oMRN$Xki|*LzNI7 zw+*;l{lhk#d~w2dhh$@uKdsNS=EQy1#cZR>ySwW-*__T?Y2#G8Ps1Ws|6wCTaFR11 zOcEHWESgs>wq+5aawmA8wc>HIT8lMdRJ=)TC0D6V;nE$)q+0iD*V*Evn9Fh<-^%Y8 z`Zh(X8E|n6We?>o-MHEcoSeRWwctTx&>JWr?{R}|<;3eB-Q1sa_!&#!&w7sRO<;0j z+z9@MMH?nKuLZ@P7^D2@wjV{Qr!pe~O}EK~*gE0oG_sd3*>b@d|FKK$*znt|6IcI% z(SfFU4VU!@f3PONlQ-_5A?0^MF%8##b@Q)O`bC?6rO01m^cQV@(dI`HwJ*DV z$(#Sb2~nEjWg{b_3fbzvHvUh4d48omD(aH$e^NMillM8-Tqa1Nji#JN6OSF0{9AqE z`3^Yhbd#2tc1CH4e7JNQx`46HBNckxv`45`6?%}cB=R_(>$h}kr=$oqb31c0IYv*e z7QgaQn5boSlymNzTwcC_mdBx~<>?Y73mvmv@s#Bu)6#D=rNa*`3{-w-j*1McnU;`K zdt-v5m>+uo*|;&`tTu6~2p?Q-ZO*t3>o9$%sik3j^-Vliy5Y#8pp#CDO5TR+APHqM zeiIeOORY9+3U_yL%qm!AI9gUEui(~F^U7k)rsgP&t%RK^8%*#GCyb4(=Cu@vv*;Vj zBGC{H(m)C%NMHVz`QvG=Mt}n3%CyKw51z|@pAj** zz%E{61C}QFX}KtH;XGPn1TM$e{r;{6lOnDD&rRUgYB&nKSzk^{qNZ+-*kQ&zr1bjD zdC{#LRX*G1#K?~aX3Su5Il7YMQeC#@nwDv>1o^vx{>W0ejAj~ZRa%0@+6}x?`=BIT zX1T<1yA<~@iBUyngpm#whnrAKdFP_)*Q3e*Ais$z`|9$LUg{Zc#l4pL#i9C?ubIVIbgUAFU2a2I@#*MaqYGURKN1{!)tTQWT^E4ZC+V6isSCg`|ucj%rVYoIb3 zx@X*FXTH!7o@EKr*{V7^-K@$WCjI(Su<{$MaDaw+nNn<4Rhq@EvdP8pFYk34kobbNs~ao|_i zp@T(xjjDW!fu($B;I(f!t+SbVcDyf=BWWH?yE!#{EvnE`y89*vrP|DNY4C$}A?hLD zV={XX@M~8(+nfMqazzR5(;OtP;Tc4Q0BKwr*NJCgwuwZfYdPAe%z~5dwK|w{w8(z; zuW00(F`-iq4#wSQnnS{mAc@PRbKkL|+4#b$b^Ua%_=+cEGGTE~btRv!k!nkCC@%yz z)VV^YJI84V5p#6hp@K*5FT0wOVp(Bvn>sfSfm^X5PuJWfjw2)7sFJfL#Ic-cx)F0> z486df$)r#kJzPdZeM&3bKwgupzamCYLGW?IB&qbWs2c zaGZI@IFOx@RZ0B z%kbAN=&@)sH?)apKa6NX9TF{B{y| zTI2}erbfO`#4PDm*m%Dagn}w;KV8BZq4|NLqNbg5_#Ped;l!J~TOR|o+jeXi+()?k zq4rH*#@(!ip)v7voa*2iT07=AbASrmeF3!#Eb5*Yk%P;eAFN7sK157CX}mqbu!DP-4j14WMT zxB9Kj%XhsiX2{{B(t7wwF((Qbo3QQH=^T2b>hb)To#nfCd*Lk255pm4V@KH*R!19a zf@H*Jj~rwCf(G8>I#jnI7QFKQ2=d0(;xw+G9B~EpojHI%c)I1;tB<`e@XXeKrjk(8 z?*qilK9siK;F=`#uW4FSjl3jbvbrbu&4sVxYn{eiPiYYj5ZHa3C%qSP3M@Rf3`a3Q ziMZ`_xvwa*Z_Cr&wRa)S+@j)h)rc_L(A;)xqFi45mOVC)W64~`U*jIWp90b0C>sCe zV&T+e?q-Xpbl6pBHUf9CDa(or-MHOGP|fP}HSKONE>a8COsl7eR1pv_wksbWPqy8T z`>^Wg0e=F~81wX3beE1av0NN9w(>x>={Sv3CN-33pU~Z+nd$l1Zf3^NKe&~{BmNYG z00t_lCgx|C^QF04ldcN^B&Ip#mI-pM$PE`KyJ0RyEShtgat-)z(jRoynsVGxs1H1C zAM^Z+Hi?sDhFA64dMZd+25%Dj&C{B8a}tZN6eA%k@`70_@u7!X`0wt(C)334(Wm(X zX5UK*)zWtb8EC#1ncYiu__67)-b*;|x>Bo2f3b0n^{gF7See(8*X)IfDbTx30hM>j z;X00fdnfL$9VA195BolPn4Sxl!313I`^-ABbN$v9;T#`VR;F!MfB&Y?pcR$2fzfSF z!4f*SOsTbHg_wu=2zKs3njU4YB>_M7s3ee1A=yzsTE)J-?A3>d8tnWLy__g$Xf9TQ z@2(ytbAFkjNPg=AaXn+nMsQh8(_$ZE_vxXH3Mt{G*YAIqcfFroY(*l27!c^!>g$8Y zg?A?8Fsljt3)ON8*|6OKlqM@k@5P~p3>}w?-4%>GrI(Qy66&gHdix=OJ0u)K?9izw z6)yag-7mPa0%dm#(C>}8dH zL_o>_rdvLSD3-~jL7)xUo5s0$kx*L+2avjQf~F)luAuLzv}Bb~U2bCN?CzKTxH}v= z)4}yoQ%A?D;UIHwv$ao|b5W=%$`5s*b_Z*1;ox?_XMjv4=tp?jtOlzI;#DRwo1kOe-n5-U13G|BUJ4oVnXwE41R$BAYkuv8`xr8OH<=ZOZ zx{BmtdJ(R#i!r(@eb;ZBH1kLld@Y{P$Hn&Te7^A;x>4Q1E^>8<$8VLxPKDL8o1iWW zk=tCL`!Qxxzz#$*dt^48{Uq|kO?-PUv$G+8nQsotfl6N z+&~e~ajDKN11{Y>2Lh#ufVz15S4@w5zQdggn{Y-l<=|}7-4#b9AUcl8uO_52=4-WAh6&G3U(n%qGcvwA)wFh=_O zJKMF-ElyvB&Mx9LYt^oUcb@!HdbYmWkES)UD=LY06sk0t33lW;3E>NIdP%8C_L%Vp zHk83Fu_hr|;@0b@=&f;`U4ZZR?V0u+4@paXqkyj-N_1^qlU(TR_2bGr5$E1%-boJ& znqsCwQf%aU#ok?Eq0HX+X3~hmlrOvbhO}63VFno17Oiti4m>$|j9bie8>PB2r=(vu z&7#tj(xg4{xjsg)Y$Wh&kzVSjQ4nJzagw_+MGlOxyomo-bn@WBz)<2;SN~vywTHoH zMz}h;eGU{9LK)Dp1>d4TM5ByEuCh{6BPq5P>2P+pfnmb%b?%Cs-ZPyc?yZu=sKl-4 zb?OD_H`1WYgYUT;2(sC){LVc8J7cLo$1#3x{fcV*ifa6dYW#|7{F}VZzdES@CTsJv zZ27tMOVa$3H2-HMjb|fKt&#z6-rmiJsgjJF6XLvi1b4jsj77IM8A9D}^`Soq3=}i3 zup^dT$1$;oUPUl9Db^APz&;<^VTit5@etGN`Fm7iiuv-s<{KXcJGJVel ztLD9yCyS%26+u5ot*}S#%w``J#Q>0Q$oh;<-`gy8mQ!d$p62l*pfr~55h%){Uc725 zMhcfP9mcuog3Q>6(;Iu1SV*}LCpMyX3#!ANJTp|oi4I;YX~BiiBJG_(@MS-Ridco- zxo>X`T!ZRjMFT9V70^rPYQsRTPj^Lx7Zd;^#eiwEr8s?_7MLDskM~WF750{K8t~o; zInc)|&hP$qtt%9+#y>(>U+UNZKxfVMLFe4T3vvSrx&5`FEP{7kGzg2XdPiQ9|RYnV??Jw_Kz$`zzSR5gH24Vre>i6P~EAQrpYu-nnLViamy8P zEenszhK*@s-1=hna4OwNCQcZ7zuY58sla4%K%lD@2gw1|;8Lnjz=c)NOBtj?mEjkd zft&Ya_UKKJ(v~H!eF$n(Xg(PH77yOduJ_*Ncl)~dKw!#sW>ewahqS_=+C`us5up3( zHZE<_6_o6`1g2|4pHq>1M58Vy^S<20J<*`ut4syFFaKn$;l8JHi^Bp^_jU~^f4fg zZGzyb|Mj^E9{+2_F_<#6$FrsB0AP+|7l$VTFM(QnRr zBq&|^y81O6RPXHX@84V3K+DF^PZxYAWN`H~Se#3lReVTjIr98lkj=k;;uX&y`-=*J z6Ise|LDxMLfKdH-LeRKf31{C=8pA7qv9E}K7zd1(htBnM|fmf#NGOTNS54@rvpw@n+`2bvGtK z`?LSmJ>2B9`}kx&?y#U4_GF}1*FLH^0C%OnTHEdF;zvn}Wj{#S$0^=Eh87lQzv%E* z`z$Q3bx~$kgas}$J2-!}5JbCKhy2@Jc!>ks3rC*X=MV>8Eo6#c*CIp2JCsq*nvo+4 zizJ{n^-Ni=z#ho9cA2sFW2{16nJy|cBrHrot4~E}uadW5ikAsBT?LB6Vf|bTmZ#A^ z2z6SZZ=UoXrP;57@ku5Fv;qPv9-vU-hz&)!0cUrde+?q=K{SEO>44-nYxHgaBHt*# zHvR{X976CFZ>M5Vy?uh93~<2WeU4><=Pu@%iEb9CT(Ky^=0Al!$h@VSyR3H z}7X=BxNr=cR@(7^vKb=>*i(4F87^J-} zR8U?QE1!iy*(8fTXxQsrGV-?XullHd6Ow&jWATmp5>xL11AjVUX9`4*DM@(1_hmZ+ zNJ=5?CMd zRmxzaDbr>m03;s(wL(FLEhr+8L;|o0b?Vdef32Z-l>IZ&l`nD_owmUEuxwC|^l8XW zof!mK6PgToK#+Az;3Xe;s&v9x3z&VLZeUg`Z<`G`z(jON_YKwwxtJPu^wRNtTTzNr z;ZH$y!DfXnQgnLWG3`@kW@Jif{gPvgkuw-aykLMd=vMIz81U5s+IXA@kYr9Rlw-c+ zh^G%2Z>(OXM&4L0W&Er{i=-Ii4W6?5R@Kh;B#8q(vk3oF68LN=XAS{twL9{<`MGjn zuKND3n5zJVCi)+s(31WCkcIzY`0bZV{43G_A1C^M#Zmsmzy5+0{el#Q{(?!LUTrEO-Z>Ln!VnbsfBv~$klCK-uPu#7$j#n_4 z0@#o4@e9V%a8rQk`DkUftbT{DjCbU*H16ZwZf=76`{c&t%y)xk4BXkudojlgYEpLl z$MFyF5l>GbH44)PJ2tSUCQ?+Ft4O+M?&Xo8Ov!*cR^mAla0=4*oa{}rbtL5O zvvsdy;Rs#9b=HbnVS1QHya#%?C!qFr_sN)Cl!EX$$l+7@5b%_+IQ~UCVc}D)I?yr4 zkz<0`@xCV2CUt*tg;^gy6Aj=`&*+@|-3w%AK@#}K)P+~SMp{%iUe2AqrRit|CGclu zN(-eoC))zB5#E+J+7fdhu<%M&W@gY{WrUY_t;U4X9>ti@?6NMGGz*f!HHA&NO&saN z#orf%zKG^7YylRgxgTZrru$=T!Wbh!;M_C;p1$^3c^c%6Su4i992%tW9y8+{JqTkt zd3_Jny_q1AQCSy>-0kXdY*TT%3yNI%sSp8Fx;@NH+oBk4Bh5C-HITerW$f&G)c-Vh z4?k}CG_CBuOVf_NeDnB#c&!;7OOwUD*!YF&ki2u-J+dZRdMkY1T>?3w#g=;K-BUK# z?+jpfufJj;Z>*}U)+G-7oZrz8a@gXu%qNREMjlg+Z!k1w^?qFyvS>)Kju6-iP~8lm zcqjBJ2l|W~+mJ3&3Dz{qyO0#4Hb5AAt`M~|ce083WQ0 z3u#zdT28?x_=rNY{9O6omn2zmo%Pf-DKin*T5{+x=Ri-0fTHad`*{OboMuj(4yTsI z0Gx?$vz{P`FCz|wd%U&31{K6jQqDl6W(%7QfYe#nX%$>5wzkF+Y7 z3^ks^FBVxZrZp9gH#=fwoV#u&?aahidGPNxY3hMPStiGk!ux2G#3Q7=kK)z1)hn5; zpXV`KbL^?0I%1(QDxDh}>}_*T^XQRN3l7KiND!@gYC@5>OAu=}w}(BDUfoB%8IB%{O4jqRcQ--{VR(NbL%!*u+iTRzU^JTe-_=zTk=T7Qs7)}U_v?) zyWFE*mHmvTnHKpu`5?n5q&duRIAX^T7$~_slxVDxR+qL!i@@BlL7Xbr)XPb&*3^^M zQHsA@si{X#aG&N$r`ThrujHTLNzZnAnOENK!cZ?b3{O&Ad~(d%Q{@uwkxBa&KoqG? zGlk8a29Tmc;TBE3+1~+p%8@&-2R=V_oMIR1dqk2WI5o3>fYs;vhDZ;x#jgvA&}Z*A z=DMx%nf_D~*xu+V$yVX1iOW^qZ(Or4CDF}1-~XNqt7xO) zVnVW2?wc$C?J86NH%;>MXS{M^YLqai^5iIAMDSdxpOmY zWvuZom=w!qr@YQ#m0bFg^77K56f>Qarj&%;jj|oH!3BohnW;7TjV$NKs%KmRx_Q$9 zNRxEVeXeop&K*+!|B3AzyRK#v%tFM0RfLmIv6UF}jRhV364yJu&o2vLSeiGbvhej~ znnrGr(YrlDrc|0$=#GxicJ3?Z%2Cgv;_@K(qJcr@998Yx17C9v7GV#H z5tlTKOnxqg;696`zi+-^H|Uuy4f36B<5^;jg9sjO-gWV0(-l&6f49xYVVgr2_E{+kf^T@^S zJP@23tJ)73_}q&5E|B*t^VWz1eVujH0}`-8u5l}qK)st=?5lTLH-_gSiO6xN9lK7N zV!JWTqui)t?ix8_Et7CT9b1>CktWM0R7BX?_3B^9$>mZHyU3`M42!efpqs~Sqcq~i zK0a+PzGt6h3eK`2mEv(%q0$Y&RupR9p^IeLD}CuUp=l&t(8YcCemp@`!1l2wKBoqV zU;)a@=xlr4f{&Pyj^;~k-QS1`z>v>{tD0YsWiuiVh>A6vjo{<@5)&tTFtskth}J|9 z+`xVPJ-)vmGY|zZY46v2yZ$LwqskQ~<#*3gUObG5UntKp;Zsb8vAN1Jw{Zn>pdYgM zt&(+8+9#dK+Q(>ihTBO&+gmr<=e3k`3ruppU;W=^N?M- zkn)+f_m&I28PX2&S~q(@W}X;3@`Rjr0h2ebg5Px z+V5m@twX_bWumSCTj0hT7+)@oEjFNJ{K8Us3x{8qV zoM^#y>!RG}N6Jv4RGOUuAv@|_W=SckojtWx4m`ku@x?oI$P1|hs05~Lk8n2kH(#{w zD0ofYk<-_D88j`%Sd8JGbny4r{4>uRRQE28Ro=GHr-PN1=MGqzQ;Dtxq5{c@mC4-J z+O9iJg`4yX^k}`hNBN#?lY|+yW8*sU^7=yOZH09zeorKYr>0dwm6@5@LOBuD&5Wl? z#5-`4XopbC!r2cy*GWCDa41upu&rfvT*#>DujfjOvZWm-LnwX%VHr9QBm5yz{t;ld z;>ry!h5*Nio~80zYWzh;C%Ccm2{#!CRe{r1;=xkHaTrP{0x$N7!9h=604k8R$s$9X zT{IWg-g)6MRoI4z#A zFYsPImySliL&G0EI#KsztnuSL)y8)ZdciBTbzxV4R^;oFJA6TNK7TD&dlL%ub0LlPf&2{6d!#dPI&l9 zEluY{yrQadc`;lUwJUHCjK=L+y#&RVx8*NSUx!8t-0>U!@9FAqP`p+f4G<@whl-pe z1DHh{O+K91?`Twr_kaYa?xu~8j5^QRbeDCr`|WY$_~v*&I+-}QTo~`u@fX5}S5{VN zoHYv>&mt+<6k%`#IbEccG({jh4g#P2`^z&WG$eD+{zK8fzwM8nkZ^hg6okx}RsG|W zfB%ZWqaft#eCzPr@ENLNgsfw#qJsVD5F|1%W%NH@JlAf&F=_}^ymKem z1N^2#a3%#cl+kO?98h!bR{gdA!PMiB+h-q)`wM+;;46#z@$r+wj)s>tbIdF=h=1(F zi@w~QRKGIeEbHIR1yJUaTRz=kW)U(;uY;_BNJF!#wqW+P0?P6g3h0GiP2+F<-Bm+~ z^U>Cyd#tELpRGeS$wtC`rZrnhFgRHCDncgoKIMv1=q0-Q>VZVUxR4qpxDh)^BiAU- z89YTvxTL5r#y^Q5`KpKz?jS8t7dvw{#rJpqdE@bdWl1wHJGtM@_#2BM$BS=%`gHK> zW%u#wx2KG9-XULI>wEAfnc9zFkO%HchX}-8BlnG5sx#C)?^;BX{yfg-VF%qgICABoV^yM zpUtI$=b@vU4{XZf$8KJ5%X&b9$1T@5piOD9dT*ZaDkJ4RuTUY4Tky;rVtAG_mlY{c zVt9Kv;^Hmkt6&Ug+isew11VzKmwa|vkr=7`F1$T8$R5syiMVLQ>;uWvUsUN=35I0) z1x)Kjs9}M@ris}}XJFL$h|YshTUJe|+MNp1=@D3-wyT(yO+~EU@Vk%)(~=!}8%3|) zI{0xc%?Za=pv1#T_re8Xwwe56p=Dx3HQAQ10RN)yQt!7x?Kk!ZSYOXI);e~2sj-Ye z*{2>(jBHPI{fMokhGa)_9q_M?KsK(F@z%R!=s4?v!mTbew$9>cM*a7048@~nyixW6kVVeKNIX+lnW zQYsi?S4_;VE9+o>t75!cWVd9xziyP#7=nYGa^4>^3FR|0sUeCtU45*3Ibi1uR{jA)MGPtjZTx?7-86i@V zHGL1k0wX?j5+Po3Dx`Lej#v8|ppp&~cYNS)ef(MtQEW~1q&wwtYiY@c3*H-xPnU*8 zKdksXdwHMKW4FuJqh1E60kFP8=+A%$f zXDPc{HSor4d*G!DW`K08WU5r#UyLZ1--E>)7lPcnedOez<2kjUQ)I>5jKQCZzO_k7niWrarM)^ibs!uVxpQECd<6V@oJfY7Ds zf|YtM{p}(wvL!}zY^8xOpg^2pIn(+!XD-e-K$=l4Ys!NPTec!|QM8&UAvTf-#pEhr z&*FBdc$Ru`%r|+aSy*6SmPwCU9dI?$ z%T6X7%r6VMo$NLC)p9h!XF*ZW_G$NJQuya8O##MKi#98LCG&~!Gl#yJF&9XRO=2nE zDu{=&`|S)T@Rxhtg=m^S;UY8I&(i;B=tNK$7Vl^@T92)lUDd091r-zoE;p`{-{#${ z^RDi>6{InCrO~N*D@R#n#9m&jW&G?JVr-y3b=2|;Ay4Kg^%5C-x+aJG)?lm|?oLuvgqsQg-Ai@azWwcBcBm$ z>1L-W?@m!o8q#-I2WL@#zjx*|MCEGV1T5lJ%zQ0bTXvJaO@!`-3 zr$L*X#bo0E0b96XyKb7d{zshgB>25Z@8cK!ec2)9j@J|LB*(Ps@!VtP9`H{#Vai<6 z>c<{BG01s8{&=FpGVFs~6|sI9%V&Tj@4PgkwQe_;aZ*7wt??iq@o@$u;uFEQd1r-R z^Nigxa3&T=I z>Iv-E5%2>k8PcO8#W7u6y#-7U9W98kW6B%W%Xx;4$A;zS%gdZkCsB&M>JABugvA?m zy)ZM+c`(f3X&`*{lcY&fm7*BqxzTkONZdEzPOBGV%G8*_U2B5k3p*^qeN?wp>dK;a zFFTDYdsz$RF%PO>wGY*%b{X=woq2Dr*?k#IbJ8Ufcrlc7PBW~pjkRj|*vt^)j=YUf zA!%abIM&ro)OKPv%plP>H6l|t>N7!A^Z^<1_S$2`20=%W7gooPWr-V`e|)%oriZeJ zyQ{LrzksDsq27IlcjyYSX7(dJT+DgX^qV_68>)Atx{Zf!L3X^o$7|JA zMO6eY(l|ZRZFE%4N+lQKg<1&i3!FRH2Oco|@CDoW$CQFaT6)Vz5nN?%^cOCi8tJLz zE22s*ynpxNfm)vm&dT+$>!mDb5BR)fR?X|^bcSdSdLig2D!!n0Na3Cc5fR6Wn{Hy| zR5~Soq+NX(Jv$lQhEA8K_Da6WbcUTF2pcqW9yA`^OC*h|V6fYH8a1>1^`2y|oka30 zW;Y*onM7`xxR%f!vNy(=RoO8ot40TM9vdYw|913q&`E~&6&{Y-x)q6>=C6T}kF@?- z%{57xhCpeEZ7Z5h2YSRJ@RgL$W6%a1UHU}>PXlFq&^$MB3OZ%Y4oBGfC&vL3TsmiS z6=+8hs6tgPxT4DxdPmCk5Zn2P?>r*Wc$^}&q4VHKD9q=cUDPY+3x(kgVo0f(MkCVe zdFnGGCg=QW7l^pxJ&lJ(c#}xHcR6jK1;e?^bA+4OAwIY)0}*3x-9`(}uFB?T!ixyA z*8-wnuPIP{IEUhY|MmzJwA|(zSTM@8?vkuS-j`PP$yM%oS*-*gq3q+kgCgul6dyTW zV*Yq!eADMQ?-tGC2Rn|Gjxz_}GK;eIzLOu^j%cfs(cp)qTA2M{?fB=#n&08kJZnclYphP<(|gd4a~~oE^^>TW(GZieCWHrwn##3m!Y^qC*4nlYsZa=zYGml zFr>WQE|&Xhttd@iM~rv~7m5la9a}ijC2#LY6u9Eb{QS7)drl-7x^wRKEHSe2@X=gY z;tp8@M~qBpkP<`OpE(FU&EvJp>(dQ*fHCJfyPPpcp@@!eBs~w-O-4bICiT=D#?t3{H8gk@jT*G|* z;H|Nf7~*U3a|O1-f>Y2v6cZ?c!wWdbJtIa=@JK*XsV_t5h>^*k z7*Nb`L>&y#_0nI6i(gqI83@(M{*eXn}7c-BY&1dw>jT$VGrD5s8_EXLe34j-d-zp zf!OS}%^OJ=3eyZe&XcIc4hkH1+VcA?SeHzC`D&hhxLrUsb2l83%)O?ZiQ+S-I;^@B zGl>&1yrx>y9sxsKJLmaP%46g>eF@X_`@j6RUXxdPgEzRr-k(`LI|bo>Dj^_q-s@f}D{Ml#yn9M_C)# zIzCm*dYn)NT6V1ZsfBXOrv4E-(JIb|><{($KHd*Zc`sqPjCBi|c$IDYuIl1o0PrTv z4`D+)c)?oduuKMlUoe$QRm!{##G4~!XQ?=h8kh4-TL8#EHQ*0vo#r}AhQ6!BLlChd zLR_m>D^|c=@M&S*H3M3-xui%F1Vchpt6K7~kXR3H4p>N8T`4Wp7usQH zYBS*A8>0XbaRRc;6dQ!waG(QrT*L~J;iczVlM+;RXKQ*|K3VJ zp_Jv#kAJBFM|Q7$?)(LE$DoK&vRZDE9D5Oqz}Q0ZqiPWRZ~IMcaFOb81tvBAkB}V6 zE>9vuG9D@GqLPhu7<-Y zcn%%QqoiwfbB#$TNH8zciMb`A)aBUra8{6IGQK9og6>jV_2B`w{Y*{VfhZQk2K zeK#GV&4KcJ{7EL?%odJ(Xb$?JhZK@BrB|UVbYm0{rKe$<40ad6x*a0oAILyg3j|Pe zFy!nR+|&*r?3lC`xyug(VIj}+jf4bHuG8`u@U`FZ^sDzfp1~>3iDA(pR0?#O+FPq- zJjByGDUo_cu+|kFi$LMz!y?8@~83igM82Eim4BQ~&fi9s}{x5dFCr{IGbd zvHHESY!|A#g)RZQGX_tke0!nBGlhE|yF!gDK}6ed$oWf$c}43QjEY<#M9clSCqYcseE|VRqT_z zanIo|zvjXPT{S*7YK=Q)6+iZcbw&Gek!mTFMO#DlQRvr#l+b0!$bRHW$)zVK)7C5C zi^$}!f|uJ*um$XNtTC675_-dR)5DemdSjIl3rd;rmpD%vR_qQ6gg1thqxEJ*NVYZe@M0l(*=lmH%Rrip=!>NcpDr!u^&qtCoo1mpleW$ ziw^14AVnv??5i{r8Q0`_P9R4S@NBs3!R_z&s#XcmjakS=7hpa|(#8lQP`zItEyYLG zRldTn{OsD!P6?K^wXtGiehZJ_!##;u?(>M#k7jJepNH;6Emd?y6)~a;M;5q0>mpY6?p=XG2w)&TT4O$0t%LX{36i z@)N=#iWjU?KW&_SY3LwIlz@*qCE6gn)J}=)sPtuM#Q~K|2G^-iva&S6!D^3@C(epnMMhb8d+G>|FLn$OhnQ2ecTcpsQ> z+`z6D@*iEnc_0;%?nKfq-?o+y7nG$1`|d&pfP<~Sc2N6b*k~>nhu4qF?aX!g2(Z#| zt%E5fbY=Jn4=$)b6{By$AOaXgwRhvPgfRPeQ2K`HT@9Z&vh(I22_>g|!p1d~`8ey{ zgvy8Mmqzg(@(_gJrVE06Lm%4X*L#KkEItmoqK4>3ukG=^v23Hp*f;vSFDreb=;HEI zS#<3WdwgZ8Di?}=G7mo(nMxQpMiC^=$P8-|JWD78w;~{*f(4sV3+}E(SBwE_~kxYU_4ULQKEFr-Gcyq<+IviQ> zsv=fh{dS;<*)fuWKo&_~_)?;S=ok3)ALoTm)?@JK6f>E9%&WBB*Bk;Asxv_b-aAjP z7M9G^EK51k?IrsqUl}M+e54hJrzfVC=pk@ab1JrUtBMLe^N@-%5wp9_2pRUU5TISw zzh$hSv@6~hFHr%7r!P@yl`01t+^^SR(VeS#GC>OYg5F#p4cse@j==5-@#Hrpvo{Qd zK%=Vh(1an|52JQnE5}Z6swi`w+AZvZx|%_oavB1P^qWKcQ4fS7c3)LKg6!qiwb3pE zHL^f*T@ONE>T2j2Xi36U4@Qb+F18eFy>o7@W#!;UH2%J{?3iP3b_p4BOo$#44r|hg zBnbSWYjCqAJpnW-39$qMRiAIKfJ#bdze4o=EHT(f&S3y|h_D(act#ijOQkWxQT9Kw zng~;iWMI<2-`5HnH%hI{Crp2nvK%P4F28APKPW&rbiA&e>Q(Q>10opnxD{A5Zey#> z+#1S>zo_${2GFm^%GH{|<^GN$A0B~n!!jtN2PNzYP=SWBNDL@DQ;c96W3d=1O%R0c z-lx$R|G%O8^Svbp%1-2`%X}UV>K0>+5_*94Isgq4#VJm39INmeEnH-rzMFQV3govV z+Uup)b$wM1M`joYDa_$eewx*;C@-7upj=hNDZ?e zB>%BmDrl8XjrU~sa{{TauPis`+N0ZIu)6?*tZJ?5eE(;YUiQ%SYf|?_8qtm;_=F&w z{!{h5@TEoN7!q^KOWf~>vlkAlD>MP9-c|olErOL7fu8o5J>7v4n^kZ9F=Dm)cA;m- z8}BfdtQ~Yu*TwblLw-$~jEcqCC1VmyC&;wdDnOtrGeC8}+aCjD9M8CTzXOnAI>wbs z=zzkaIvtfdBj@*$n6i}S&bSLL#zpzwlNCk$Bm^8EIfaZSQE)ZR~q2qTc`tOO%xJ)u7AAoNP3yJ$M9SMcV%+j>2 z-~ia5dYKMJ;l|ZA#iR)@uYJ3o@koXP)oEp_0aEe-B6_%okxVw2Eb6w3SRyp*`?>h! zGK}Jw;43`XpUzMPE$HD&j?+q zXHJKOP%$%Da8v`PeNHWUR~%d=L=o0b1yMqvV9!iyk)%}NQLIgLrKWb9utRsD#*c|H zKfktPk=?}L0eI;HFnFSmOlbfl3|%z<4ZxdhF}CwuHNDUK_tO?|9Qt|i)?CSffih0+ zi7A5-;HmOT*3P|hm@j(6vb6wL^ifZyMi%e);Ub08OXA_kRHi#{4Fbn z5J+hrzN}E+-k;FYA})f8!Zqh+h_J*QcUJu+GClzTfMfFnCxdtZ&+Vt30!E&`%^nO+ zgH+pICdYuLdUW|@^84SiMv>Jn_AUwv5vusa69a{4HK}q)f=8|M_faQ6Z?KOVYOFGK zUIe9F8Y(YSq?CBI*VT7jp@kY5iJ&0)qFV^0Ej>i_w|EnXg5>w+xPCp!xa+84dj8W` z6BtD}T>wYs(LHR{N%-@r{R+0=ZXnztxss!YxX_gfRTW+$0<`s`le?hbX!2DY{qhe` z{z7&A77P|0(4ONa1V?U}<8xSIyZG-L)!4Tb?bpu`$i&^km2Wq9#OufUIYdB&oWdT| z#PZDiu|K4QEOe8{%bkqTjWE>Nv{%yvkzwsTU=I7lZfu(k(DU7WnS);_NIpPArwM3H zyuRkQYmgivFJ?gHAnfT#v%Wxcl(nfwqPfCtsBY(t@E<4jms~QvP0PYehyY!KHh1Db zO2EKTdkgwl<4EJUIY3La$MmU2hjGyk0U4&>`cwj4D0ig26FkSq=Rdp0$!mS2_&}mC z!`Ts(DR;B4)JTh4A*(9SX#NI%S=KyAL-#$fFXEyq#2~k+{VT=w!_YHASE-mapAKr~ z%1H%Nro|O#>nPI{#s1}PH(|)87c{-=8Xqaed6DMoz>$%6}z7Q1a6D z;jP>cN0K?W%(G~iONp~xq1Fv$Kr?&si0I;=BD;0kZwnFGnH<1!3(R|${^0rt$SU#T zxU)I&*_C&a5j?gcc79p2S4x^Y)2sc90 z55HEut`6&m7O?t~Ep0A(Po4zb(ai>*6lZ%k!dSUrV*?>QDVy}4I9JqOfl{aXOo-#< zoRr02Z*P2EpYr;f@VC~e|I0A~Wf&k0peU$r;t&i;znQ76N^O31b@$FM1~fP49cYpQiGXS)u~8nz@)XOHH^YGdfg{8Q5R{lZCn68b=pS32J`cak9T zQ77uz*Mtj--iE!z`9|%;u2)3>aMZ_MeEiE?Y}A#%#Mt znsZ(E4iL6)~8_7 zeXEgNLhRbF9HWZQ(w%w_zsyse-Xg5}ObhMg{KKc~yn8aAX3ubxiilV(8=>`SxC^)! zIl9H_)4LgcCJEuY~mr7f|$$wb{(3FJOIXsNN2lLT0o?H zZ=Yhq@+ny1M$RA&#r=J67S)P9+Du!Y1{|4d=rm~~d%M~LW2kAsFhrc!|; zmAGmCldJRu)%-OuP#3x-m6r`34?qu^&+;z6S|TAB?D2o{!Dc3Jhb|)<4@QB{B(HJ{ z7M+$JL6t5xc{ApJ3W5_Mx-3l+SQFA%;xhm;FaHjJI(Q2LNWx;_85T)E(doC(@RV&Q zh~}%+FeW$N2@gk_r59ctzSQo~?VoWGuo&`4xo{oBmmPhQkUUb z*7a8jM0ms7IX>%DogUuX^w)mnn^7s6esex8K+Mtfkfui3j&_^cAM`XS6<3%|#2dihmqZZ79j8g%D* zTzMK1^Ef542BZOE?Qm>MLg(1<{<|L*GB@gVJp_H&Cbk*doRQ-JkXS9IS|lH5$DfJR zuHC0&TlG-&$m@A4#v{2(@TVwA=rdkWG1`_D7GBW{yuNdsZS85J-Quh>{{qmL!cgHs z=)+zlM=%s3pGF1k$RH_#Q2YyyrBSiU94Jf0$I#W(P*#W%78o}~;0hYV{MpAMS8$E6 zG0R)NO1Uyz$u!~AkYr4B@^YM4^z{2F1HHv?h1OWdBPhTxx$+Kyn7#y;ar>7)wO{bV zb^ggE6IA2c09)!T{?Mg|QFQz&mtqI7iyFYL&RWh5Prz^vUjn4Hz_)kQnIL9;;0u*Y zn+7}GdYJQzvF_i!B(aC%R{a0ajEkE(Cmj^i%tI!SwC*3x>v8tZVZ zcee9N>f+H`SKBv8v}}KMMqGn-wzy5}dIZk#6QG9*?=q&|E1`P{DGq-(4`hV?vn!hq z{>!dl`;}*kV5>gaID=CUFywKj9!K2%xcbqd({ODFt0WaZDw4;qUBH+c59P-2m{5#h8#jiB+ zbMh&H0(9ks@ftMuZ2dFe2W)WeRe!Tt{uh?>`EOW`+gIt|39*4YP~j_&0fX)L#M!8A zZ~nzowwc7)27`@ON(*At?+pl~EcW-HcSw`_@<14(IykMPCO{KhYb=v6y*2*=1V);+ zwRRe0vVJgWx1`@ZT%ls4besEh?%ILN1iHpzy*ut!X{1!%P>|<(@z;2#hX9tD^vAN; zZLJV6(@O#FbLfkJXVJ|4k)KxNx*n?^`45)DSO&KTU8MXkyamb6gUmf+6VEXKkLEQyMB+hgqt|Qf=uuw4B?Vac3GEfa} zd7C`;Nm#rL&6(5jtBJw@)cGbxaxL=2cgP`09-QF>Pyofp0R9jks|(czbW4^3*z13( zbf(IQV)&>_yla9&8`7}5kev99f)T5PaG0O`+*)0OF&-hVOgeJKvdHv1MDbkt%%%yN zafYISqA9yydl^J}22-#vZUJYjLtX*)CC#HD49TSbA6-%t1MB&MukTpIM3 zCtYt*k!{!3paG}(Nk%bKNxk%QFE;NZH^fY6IN7Fl{k1f_hHGivb`sD@lI;-_3EKd^ zP1&6FkZIAf7x|&Y89Y1jl+o@+%5a=WR1*9#5#xPdLU=SHn5@6Y7pqSA|3ILz&;Rd(;PkLHAasQP2PqTs2l{fJ=|7Wl95z$Yk5`{Y z7Z0-2EwQY3klf2x)Y#{XgEFF-vG)fZ^S;P;74R(+4Q~pG=pASEFg`B&xXUE#Y`DlY zJ_Zr}vLW0(V!y=c&t-}#QFTY5`n z@sDN>bO_PrjziC2NKLPu_vo?tCltR!IIA8HDsgD`wdT4h<;7Qc!mmD|76F3hexfN2 zy6R}@(UD2_m7}AGmNcgI9h?W%?su&Fy*f;B?GAdqdrQ=W)??D*owQ*c&_e0UN`uqf zk$Hs-lbWfPJI+K`naN}i>xOHIl_yBk55;|jnO)lU2R)u9-z$Q5H8)m$m^!-=@90Sx zUbCN3$;E7-Q*uG3^^qapebN@Qf5v9G)?ggx!ROueStL)r+#jFZ)JI(RdDpqLUD%9Y z)>BGX;4rH)d1L8Se~de`>B4!+^TYKrf+Ml0I}l^W=7040Nc>#nTODzKfzRP4Ir=d3 zxb&jwg6=6@V&b&_Vi#Y?RF8}E)o3r*KY0|MOPM1Tb3&J#Ld)5dle5!4-;X}p(2a6k z3)8L(+Nb!6oigAa* zW%i2`nUa!x-ZfT5O=zk-OrSbpp3}@YE>SEqdA+leH9A3mY2txSX8%WGZ*<@(89y{v zy`n1m>f}Cuat3>6#di0~A;-n-rrjMK^)ue4azCHE*N5bfyr>KsD&jbgw^&_%kE@-P zYz{D-9Ww6=^z7|!n{)LvElU)5*C|WC_I$TK0t=sbdOW$sv*zizwK1NQvx(7pKdrMb z&RVmrQ;a97OO)u3uQrT6i<0?U)&FolmF5A)-l& zv0vZPnzzvX`tBk9W6Nd=HgWllhez4w`l^w()n*he-$r_>@99~Nf48(2s7gGO`p)>7 zCQ>@jd^+o6Qe*l3D!Qq=Vx{zP>-Q#`c8!-LQuJR>v(0*)rZN>4NPXIictXw_v8&ao z@a>V$q_9SvNB?x-)?{VF4~u>yZ=2D=YnNySr|f=~E+FH*>k=?MEnDcz2<6vHZs*11 zb?bYAU3C zk7eFMIepK;>)xNaax=S0ZGxOAh$7ckVo|Fr43DAeM|f}FvQo;wLfhAzZFog|0SMi6({m>ud>gL#$_%{pn789l4rM?6+&e2-I|dM zj2!yuFiGZRub?#HwxP)ah?#?Silr;M(l;+&ro8wi6=t2YEDt*pdHB62Fw~RGo*QFZ zDOZ}~ATc(07}TRrMtmR-JsA3`QQKQ8jqVq7@w45kIbAt4>ngn|CFI@lditxV24-7L zsn<2`?D=eb*6krP z_~O-Mt8r#?=(0tn*J60yJ0-b+jonRgRyK7D4g+{b_NMWcM%vpxTU{xoA17HcZne2T z%}hxwB!l}-I)(~#jSHe){|Ow|?Hm|g{gDd3R?4AelDyB}tTr*Ar+q{5^-hk4t-bZ@ zKNHi7W!fd2+#HtDS*zpbPoMUWWUHUK-8*GX`X_MDc@uO3oT7(xk!!rMd{ZLLN*cz? z4K;xWo5s#k-WJ{V?Y6RL`pM3@|pQmKMH%6&>t1$I(SF7Fk{lIk8Pph=IwLCom-9BXa-ls7`-_{q>pm@P1**KQ8Who5T?7v&jPzuU(o zS&*-MdsAwh35V-X%Utm-K4??e4ZI?T<@ zUHGC`NxDEY>U+u?m&&n!JeqHwez2(o{K&X=G+$5qM3hZNGb~x4lBn+O9`v zZukZON+JM1Q;xn^*L3hzt9PVoNf|q$!X_YDmdcC+duD_ZjtmE#=1$GSu8LaDsbl=` zGEe5Jliyywc`hQ8M7j?B>~`)KiTq1ztxI+l4`4#rw!uu-QAF3V8(FsaeZjFzW9t0U z)WvU|qn;mx(VySp0{lY+-1wBFmggtoTAdLw1pMcR$1a%0A1*Ul3{Nea2;G+SF9Kf$ z?+2IUd~T?CJU;WOGSS3t@f%l9-=GQ(vOVzrcUW}zvA*n5Cxbu_*GbwlUYoauNTL4B zrXN^BMsri#NjT}BZbR}fbo_Vx2%rQ%qVL>Gg`Jg==lwwv-q)`8oC_}YT^S_pqP_QjK`Mto8>KeK~YB z-An=yYsD#NYj^vASCt$*8vh`sel4Gzb<>B)(e{b7LPdGB9)6U0~= z^DcMyt{)d~X*pUmVUF$k7B-yne-k8=m(`yI*-vNuwqw|k)+7R8Tvn+>>S#tp@ha3d z{j|;IwC|>5ijOxtm?hJW|J%S)PX@jvYAGw8VE}7$qQ*)M+EZ`e)~_%}1@Mw=|u$O`>h?ZCC;r$FbNvqw91Xo_y{@fo&#dyHil>LF#o zx+u6@qtgVI!9*?YpQ>xSgwepD@hp<{Dc2Tgcjvv@I|(V~zp5&zBE7NnSI)RgL&`7q zPcB>91G!31%IP6h>fhmEMjVhiQy zdwiyguPfCX%?O-UI?o>ppdy`J9DHdmzQ|rH`%9K6q06$su+IOb!(vea|EF*Gbjo(wCaQEm)?^-TVU z*&5hTw;}Y4q*)Mn)Cg3+H(dnxeL(WiliCt!+dQY{B;w9)~kvZ&a(Ev?oh=&gN zyI)S5prGEXkgJ}pC#SKnVe>?6_Eq?Z2b^)?H6i1 z7miG`_1zfO5C4b<{zsoCDo7xg=If(ucr4U9_0~V%x#9Lw@ME_GftjnVnDiR`5_)L& zuj%@8#wF)O$n9kO81qakIz}?p0#-Ge6}&}Av9Y7<^lBeaB<> zh}P`R9V}a=A|LvXdg$VG`TspJ|EtgeGt`h{5&J)~!lq(ugU<(^;QQTdxFW?imz{iR z{)*<*qxl@qFCk3WF-JGrT{(0)SdEcGF)H_GSXo^GaRr?>O#|iDBF7szAFn)|8M%_d zEOeXk0>1f(;8r8OWV?5(@)LuxRz_qo6f))kD21I;E)bvED(#J&fC@T0>$qNK-D&)( zI6F)L^*)SW9M;M*?TO#dCHrXm{Frn$?Ws~YG5QwKfbk2bo-FbrHjnpzM8MIMS^>`z z2wLC1{cEAc;LrXap(2D{`oP!cm`a_V@$tV3&I1jo@TAvJ^b*0{QoQ}-l>2H3_d3m_nF2gpY)>9m0A)w!dyHKFn!F}Agla`sXm4O(Pzi>oyv4Og&mv_ z2TIzF3DSBuw?1;oMPpzCtc{Y{JB?i5?h{K-=PHgEpECxb8-P?YbWxC&I~=@ z&7bc9b%HgRmi%kg`@k&yp9v9cZ^{`4C|rP_{K5sz+Fza$%@hx}{~;+O5Bm#7{kOBVCmJX_!juT<4>7z3&M!z3f(y80?D8 z8K~7Otd9@baj*Qv8s{%0fXHEJw^Qyv6L5LB?leyVt|wmXPm?85t8eoe=hd_i?I+sX z3Lakjz{zI5(eTwY{j(~G5cH)#+s%%@UV3D|rB$XR9;z!`nh>F_D7FODv7GHS$mlM& z!l$=H7^z&^8Tm%e$2k|;@`c^Tg=i`}s2Y>L;Q zD>@vU5f|-UaqePY6e%3jVGpdC%P}A-+(zuHrYj5y=?6IwCfZL zz?Eh0*q6Vu6aWE#2T6Xq;^=yxQ`BCt3Y|#M3!gn3sqhj(G9UN+z@PcTdN0)L_0@?8 zM07&aDe|-_9T*use$YC@DSj%xrnBLI+?IAbX6D|Vf~?W!1FTpSVQ;^Efdc}_egjZT zm7mlO47s*$*MACQD=~V0{>)U$b5pf`rRvi^BSy}XLqiULbKy+SB4P)^B^gkk!C1(H z`_OLFR<+%JRMto4|6Tf3Z>Zi-gNd(}bDOf{)JtXr-^Y8)ZDl+K;pw>a#KHILuQ&IM zCH^AR)X$tBBT`KGjzpMTd>3!>A*S0GxtjyuP$Nx;d~r}$NN?!00BPwQhv49)y{7GD^Ba=rRv29Dd~*oqJrh0Y|Q|ABG2Zq>u(A)7xEUoFafYPGddO6KhrEiQ78R_0)xuX&)J7oyS=b@$6Y3p8Z& zbW~8L|J`u+!1iazT$p40d#}$!_g(ri^FE%2{*^Y}Wb)>>pO>93`Hy1{NGdsl7I-Ax z4ytfu?ANq#D&X4qqE7d>W?g~ceR`ABm5u?o%kK{}ZkbiYYhSBXri173e zTEOcvM`7mY%3@He&u9R=`QO9UzJ}{3qgj(lKla0#$ZbC=k@vxd@zrx1X7t(4!Ef_N zWY38!A%f{^PDQ0e>VaOdFarHA_E5d@`&+GTLB+}vN+4kz0+;hY2?NN%Ii~E`y8V3} zc(?~QO>558-H8E0w8ScmS`XgbOtvq4OE*;7l3b{!AOYhgS5KwlgoOOKrQO{00I%A$T++2F+m#Z|He=1Cq(V@_f$J z*joYD=YFYo9oc=oi!ct&0VQ{akL&kJ9gL3WyqexUoIAunFf3rRN)UZoabMko)<2K0 z%jADdPv{p=q4%CMRvSQxl5A>=_>*nw+)=x)5&QW8Bsithipqe`>0kCGa(fcWIV+~NPUP!T22+K_`zkF2)F3oZO#D}^DJOVl< z;g!)9B&Z_`HQqVWO`WmxRGbl$Y|Nq}DD4$QB)UfpG~VQlMg-1a(@`YS8}2Wg4dSAmCWBxSnc zb69nP(Q_7tQQXtNv?)FDl1`*Pjfa4A(_AN$)tk4YtvVWG)ax2$Gbh0FJnlIm$@|Hg zx$-uC<2~B4*@dYM4hc74T!d?ars1SLy?#9!{tfnEbyl#``y2Ahl5CO1U-NmF{_TI4#BP-W9*cJR{|S}^29 z6S<`d9T1$ya+sC%AKZp4PMWG#{29E=R(%mu zv_GsSnL+z__qBpy?wAU+yJkhA8}fmHPV;_51a{a~3Qsq_z~D|cuOx{))JmN~g7*M( zGOB@>v&V#pg4J)=_0NR9eOuB}%cbKC;oZH+Dg}2W)GdK@^5lj>EcS{S``pz=Ju~@; zhlOKtxX8Hz3jw|wWkIDQh6Ihhzy4_L>kn1ET^P|J>D(J@;?4xuwpPxU2Bz$q>lbs$ ztgRP6cEKsaKVywr8|u>WQzAKYDdwy9A-PI3`w)Ys!KYwIW!L0GpWA(M<}<4fXH&bz zr$%PNR`qa`N}4#Vp#q?)^X6ynp--0h8Rc|4Kl~k#CGj==aBc*$FG)ULrPLACq&on8taQ2D(t+kl-HuL3r*`S8mtbvR&BaGhr)< z$FP*^I7N7DXyr}4@@h4vH_tdYZi&i8c8^VN{`)T$^4Jc(k4fI_#?pgIXxHH!nCSKu+M)67Ce=Q(xgpLsJ<*`9Rs#uUEfY1 zNr{P zu0VIV;<}6iW&$}Rn&}o+;nC~C@vyWZYd?MGEk8va;ouL>Efu$@U97*zl0@fElMng_ zw@AJQgEu^vX=WU70Sai;OSjo4wJ9bn&q8+EelP@T_TW&yNK!u}cT0Y(pr|J|T>~Ed zZizQ&lP2b&_;D?Qdw!2WV1%)+jvKPq(V2CpBHdA{P!hsLF)kPFXVM1<>A^ydq>3DV zT?R&UoCEo3EzdLI0DfyuOD$rwT?4z%#m+ID^o`PiGW)!4$C23!{L0Z&2EuTwl1D|W zG4ldK>;Szk*V~s%xhAhg120|8%RZgDkvHr{tf5eAv-uhBwT;=k7Pu(&1JY~INBtTB z$JJMbm+2HTUBMS}=AG3%WdY$pGx^0RT%!`!+OEEtvNo4B^W|fI8mpp-0ICyC!MrR^ z$Aez|`hq`GkGL%Jp5X*gXA}7aML<)YN(GBPQcI)^X%QXs@lCkd!xhN{Jmgv0>HrD3C#{q<5n6YNuy!wS-x1b20?Yz0 z4xii2{#Z`_kxKO(qh7x_g?iQi240-Yoxo*Oy@s**pC4;h!g#F)>z&wU2&qwJDupnD z65NXA1}nLKxNDKd0=?sR{W&FrwC1bqJ@LSj#w7luRznZ?#TnT*kMf0om6j!0SD)U5 zg{)|&0@jSZw16jq-WZ>_nD`Pna&6{Zl9c7V^eg+HVQ*?vo%KT@WL2KdF%(Dg-Pr*4^EV$;oHeJR&c75G3s zp|3dFkfGt`I$Sr(da8%=h_WB9!A8ZmcM| z)0u-50wp=zoXz9c)@AEK!9DVjh4M0=Z zt$^H;a@vJg$izlQ>UKZ8JEQrjYQ{H43I*IP75NA%XdqS0ylPzjGIC<13SzaLehano zgue2n+3<$rD4kLVG(dG^z%aI>`|rjYf;-@Poafr<&N-j!mTe_(KK}5XP!zi9Hsg)i znqb|dcP^_{g-5Fy@{y1%@lTIseLuWMCzH~QyRqoziKHv>4gT}znKFgc&CVQL6fe1H z-Lj!{)n*ntr9mDA99)LYhaGX#_a<_R2lZ*aK&Q4Q+20H2fF+D6(P^5;dD$-8(CQvG zALLL!@i?6H;|pqW5)0b=WPftkf51cB+swUXJ#BES;yRdd7B9=858oJS$lZP4e7Q*8 zddh5TeSlT2!9ffb?dxl;i7U0l=B+xcRQx5c1CnE=Q+Ix=v)bZ$KSkZc;G<_S-*%4z zorwAtSBJkbAwrRBT1%JRCSTaH_RVAuH<+hz|H!gjSfP2GP@48`&*BP-CT;GT+Ln_FoL9DJDbnq$>bPP;-p*cXy0J+flo@|L(>^v=pL?> zw_Uv8_MA%0)danQ7+1Y}BI}2X%XI;=HJ|a2Mb6v4!e1AAm#c_p-}mD+t#sJ1n^5?@|l>-0rvrI00DBvbOOE29js^i!b??s#4f5s*2$5`v&OXF6vw zY_@$|Xa%GAnT0S8hzEm{{9eNz+s2h_B_~m+hEGI*&)*K0rxR6jc_9u`rEemqJg)e@ z+R5W4y~3lE>FXln-Q#i{RNKo7k-Awi%GaUU^sBx3q4{(!3GLy$>PbR<$M1vqi-J_h zR_zY=cI&*-atXmOG3GEX*0+Wi++TD)0@T1W{u_necDr+j0|;IP#J5i})XNg$ljE4D zMsu1o>CC-luhW}*=}PoCa62K2#nY=Q`3hNVH_;l&Kn3EpS?`R4KXj!)!49U& zf53={8P9tfLdL6>U;6ekFYHrv09|SA4if-B@7tJobl{-H;U=+&` z!Qrv=!NPM)Z`5=qaDnnkbm&UY3s-rF9Qh3E(+Qch;l>JapyWLKhOWaMvs_zxY6^Ec z_rK(?C=*VFzfA)L;BCBR#dfX|*w_@8r;&7t z*}N~{;ARL?L7|x^YQo~}T6xMou~9y8maynBR2NQ;}wSE~1|RAhQ#(v3I-oJIeVuGb;VL(Ub|C zLTY4;ckl!ao0PNw)7Et$vCVE{@1rl<>!xQn2(#b zJ)93H|TE!Q0Zal8dXdWk!t$!%(czqNrmJaSY?prrLi$qxL|F!RzA z|0U0fIgi|z`9$i$Ufky^f2P*78-BfnSzNt)Z`3GFh*#B_YZ`ycvpM zYB>0FnpR-i)d=0OnBUIlxr&bje+GvmmoLZ&Q(wi(lCnIO1Swy|2}(kY@+oER-=bIAYEgd?gJ#8@}8lT%6W3!{0_j!ReY(G)Gp!1I#(@AD^_K*d_0@KlUb3#$uZDhbiZ_qEO|L&>Z{x5OE6^lnk5-Yzq&yD58n zds^O@?uM~DE&fIOWff>l24%QAZ(JJJXM^3fORTyjz>nW)~*r^vi#nce{Au;ogfM&vUVli6qs z4+@QHg~wgiv?(0fIZ%mi=Sf&M^}~+}&_Yo@d2Ys?^7>QQ;Y97pQ(GthFC%7+$qQvS zuMJ!l;LWEE@UmtJ+PSYIV$nXqo>eW|WG{}XWgSuy@yMFlz6qh;?>+gBpb#!i^F%zT z;*h!n%`(~b-5X3w@{n4yXe5Dd>ayJ#?8~#DcD?XDHU8FWs4Pip<-8RDrbJ%I4BdY@ zf=ApS#bX`b1I-0+Jl&oU`=pUrNciR9SZnB*>37`y!? zcn;qJo%*HUMFX*MsrAc2T3)GxIPK>=zm?GWr;$H#{U+I&HnX3Di($?k#;=Mle#y1# zy2gH4T%6ils}z@)X^)=!rmLRjQ?c&vwmpHmKI&7^ z&`KRasP!YMc60o|%)2ZCl>0!BuZFiaY1Hsx-97?eQ06H3=3!o>x0pCNQ=1Wb#;ND2 za^by5dV)zF4%B;@$1m_My&wnlAwIGl^+Ac@0hNeY*JLQuxAGm-t@?3>_wSf4*|!W# zJUy+g6n7R#^BZ?AyiSZx-U(m|Dcc$E)|*&z5B!sPEZX30IwZ|EJsT)rBlKC=5DGl} z>6*WITSQ_;{@A-14*VbCCBV%aX-oz?vLLwC zZcJel0G|tVyPh`fAP(N`IKOfi_7^D+Sw1JqSU(#`J* z2n36hsrA$Mru$qQNFU6(za3U9Z~kFbS~z+zyBagiaO4uNZ##~mR=f*+DbZn1)8-P{ zvp1f~R?C{H@TtLLkF>z=5A#uR^4-VmT?BlvgdUW}@)&lPc^KQQ4^bn1NMFdUcX4%! z@D`q%K;RyiJe=uV7H$s!#K@h!EMn<+H{Gh1wAFOqg>z0_^1Ysj^js2muSk%tjMQku9*% z@{ZeEc-nh7b($?H^Nv-p&u9hXsS#Yq|{=KzbO^t=70DYTr1C zMRa$~(Rj%nhWB9WiV|^S80--T%W!A}Zq>jV$JS4cyL3YH;~-k6IohDIR4Xc7 zq1nJsrCn`?+b-!wJXaCujN&^|(uoU>4d9kigT-fWNzfs%txX9U_Q(X`V6yeQ9?$Wm zO#93aj9Po<&>_6s#o-QZc*xYsJXv3qqd#nV$7%p#R8A5q@p^8#l@Q14n={k!mBJ~ucnKyCA8A%cN;ZuD zBofWKE)_%xaQHg78p<_)9dzsT_H&`1tkmoui>;OF8yfKAyQ3(UPAADxjXRM{hye+k zkUyO(N6L60w@TVg{+^#nn__+6)0%`oti8Q?#KLPas5{(sLpkczonRyS{?);U%C+|n zFKB3EGz65{>2FODK*wbkR%MpU-s;@BP2O%NnQ;Z#ILM;^kEV0*j=K-m_{O%KHjVAZ zPMXGz**0m+ZLH14wr$(Clg74fJGuMbd+vX*=j{CEJ2THSpW(GOEG%Nfd_LIo`a%k} zb0?}`e|%W>xn3(9uYjVYy$w*FF)34o4Afj&fnz|UY!@uR6o~P?$pS|3_14mE0nIC* zyD$UM>?WPh{gdEjAETY&gJP7X2!X~&3y}^F;~#)u#jGl%F_?1edy?}CNF7x2r_Su? z;+Jmu2`LQgsgilQg%Z+dy8yn8E-+L2UsO#deh1{b2VnR@-PLUQe0ctgs02M023@SF zL29vczSpW6!?c4|v(sx!TLJ#cj3SmH6oCgd!dd1&2) ze$^D`Vm#{f*hV8t31Twz(m3y_8WlAy6ow=)Lk}n$E*0IX(&m3vH`+Mr_`H{YjiR)D zBh3IZ3%|CJVj$^N)0!?|q8HQ<`;$>RL>CZr=q!Q-neLDpX7=Cn!c3Ok+V2gEmNzSx zvxZ*!c_rPjXPJOCLwU0tITQua?jRZo^g0UK`VRlxx_AFccXllv*&^}CiFcYj1!*zj zA%3<;=3+g{jC{M4r=2Q{Pa&_;F;qVuUV&0Za2$X@YRQ(M+b*fiahU1{j}QvEAHRQ60ppn8-Gz{k@NtwqgB zqi7}1V|)jGGi-^X_rhM-l%0#%MX2g&_nhtNg<|o+^&h+h3}menPSgg;q`URE$fkKv zC_L(981<)&{T7QejC#YkkRJ1JidiDo`uCk(B+NZ`K1erWi?HV=d!pZ)xmINPJ8hH? zx0O`{WFH>P*WCfg5^7HjNh;CUjJO^kacy5CwL9+xxN%St{s9oBV1 z%Gb62g^E}Gp|!$E+X;z)tmBdx2;JCy5{vi?x*!jMaWOO}8SBBpDW0i6AP;R$X4^ z<89Q+QyH|QQ+ZL8KE2CgupDsQo2^WEyU#pJNt6|3S@}ASnT^fs(u@bT%fg+ICacCs z;e+}-U_!c3EVMe=QE%Z4q0aSFQ%^oj1y8au;xxcNlx6_Th0pSnIB$Ai zcca#{HdZNdf3M4ajlbvAcyv+mKIy`e04A!|XUU3eU?<3;T)m$?wEC~hKZ>b20$aiI zEBp89_^PU1@Nuy+#J2-(<2f6fqqfBKI~(gD1Q_ znGFCvMvs@am^SV`Zd?u!unigDM@uK{GTdh%{bcy!E}7RX{~Khpr2|^P`;CWf0-;le$|I>H5b|}>sqn7-TMK3-ZvLbKFPhN)LbF0d_k1x6 zO}WxTPDnTcclorHIq2*i%^>in4i($1sUL&u)ogBsz3*;26j!mloDe6>BQBLFzZg|? zHli$4VAR%XgE+2rYa2*nD829}f9_hA`S=%n)0X`u91Za&AcD>-p7 z7ja!CtzC`0#HD1x8eH1cq*64YnDaB67n77ezLm$TKr{5+L-AG$D-$7vNv2 zmQoNy6?s@4dqYtHB+t@+!*(rl2e|N!IJanZXkS_s*htUoxB+&{;LDTP1<#PmNY4D19ty~4g6C_ZjgbPuDE@>XmP-Fot(-P@1OyfU?IUz3j=^HYwQc8#zS|P zkB&p<(hL-)brBaU+JBK*q@S9vR}@jezcN(GT~Qk@HZY3p8(*cTy4st1-4@y^vmRtJ zC14Q6Qp@DEREd5;#kAI2;GOj-Hg#cdytq&aQB@NIwl;Qb8>~=G8?4bR6Fnys#q0gq zUQbz#9Gz=Xn9e&;b_D7K^E+wMa6dsqW1=ex->G+ji8X(=WzRxvYc$wEo4?p#x`P_X zGp;9*|H3${a-vT)fWV3Eg?;ds9K*<cy4j?#3W%U>#A2JnLWj!y_e|I_(3f1dFl#80Bsb~&@=fxhD@fTsvJaRQ32tO7rC^AU7^4(V9sLo3EVxVqxfytjRVmI-AH|@`OrPaElsbSA6GQ--PJa zoii3jhDFHuMqy7T=?hM%9z_JGWW0A>H=|3VqDc<~M{~J7Ya#Vm?`9+o4C%;0^ekVP z1m6HPa)R%!w!n3qm2g|0M~?^cq`N`kv6=7EnNkT68zf4co}5{Y`yRPgD2x}JLV(X1 zl>MT6PW>(_BnuV*Ny}Gz07pd?^XtijC+Y~DK5q!|iI{-4Zr@F-+0emxYn5OJ{63Im z6(Vnqp&1G4RIyuOLg=T36ISbf%}Wvs&5s?fWtM|Ui_nm7wW4vu`-4Sye3gGgZITim z97J-{v&4s*7c8w>R*3`f>wI}!ROwU_ew&pxsHpPE1 z>Vc^J0CR#83rWMi1qi=q!j^!vj* z6dYqhHK-sBjw#q$>B!G z!bT*s&#%DGRI0M_DQXCmhihj2$KjKdtclHS;+WUlB%DhDAGLw^zPd7*2-dn%+f|eC zI{&#FPk8Wp-(jj*gWQ^zChLpH9zA6|9Sagr_bpGj09&CbdVc>=oRG&)94#P4mGINu zyCI7e48{tXy+?mE9bjuf5<<qfj`g3H56KrFxpZeBc z&wETY`~9u{`mmX^`bJnQ!K#pbp?m0a^g?(qbZ!*J%~f?_y>CQf_}!V1Gg2vU5B)1* z|COmzBO`{-0&C}Q<{erulhyKjBNe&FW?4q~@kjr+Jma_1CMAgIM1Xa??N5=GgXOa^ zGps-A^gv&K{n$n=oQX$O(KIS2C^l`gpy9Mj!dj0}Pu6+i(<@T>M?gE?JdPIg%DLP{ z_H_qoW>JWj$)Fus8t=l0LS`e3Fz0EC8KQcQ>l>1yP^02|NeE#se}#j97TM`O3SKb> zgq>eX>Q8qQYRap~rt~L|r-MXHxN|$rw5*f17Q)D~jRE~HovlU$sil+cWSz5$wnbuQ z?W*M8oqyG^mmTn{Hm_(}KD42N&B_(ZP9GD6B2S%#ifm2Rqt|4fTBGX|hymI)Rzxdl zy&F(E7hL%Xr2AP{RyvUtRtK)16<6tAP;JB~|E}ZRLp9M<$CR5I!GoN7<45+u;Qw^didnUBLv}CzZly+2wc?YkJ#ePheAXSe{YHTUbRtv2CR;hb6NGLb-Pi`1Gh$Y%^q>2~2(?;PG_Bl#=B zQ`gDOYAua*5s5}Gb>d`po&&Ijxo2XFS4;K#-*PpT3|nzMU?|UIkZnO>vGDxFMZQN7 zd>P*Hx}x(WT!k!ZcNV_U8dy^DOPDmEA;S(A9JHa?L?dE;)Hr2hh7Y#dXvJ_#P^$*E zjr|-yzZ#FW;K|%}G-{o<`>En?rst+Sql#A0i$j@>o~|X&%0Ahi{Ge9?jd^PaoFj|u z4Vfd!i3}xq69IW**O_SmQX9_w4t~C1noQ`zhl+SY5zl%rE|@F};Z3K&Q+ofxgsgIW z;-zJTcZnlsf$7}9;9E*AzFY+^uoD4bX(_SPE~RikNSh@a?q zXNbaB?Eb}>Q)CTM^j18#H zRhpvvgV48+FgmJue*Dz)*tnn3*(XO2C(wD1iwDY<5u>>X*8}O!t-LC({y(VkaDi{YdpmWZM|PUZzmi#Mq;LTX|Tgwu_36j7Rw zSCp5arVZUO;V*rWd=NtW*{pB$yY&||1WL27k9K`ghewS0Vmgps9gKNl-q%@eu+~Sm zKcXf2+8c{tG{ARPH)fd(g>d)gPRD67&V4;TQxdxTm0*imTvjkyRnI`>B>72jynfRY z>mt9gSDkD1I*HVR;?)H0b>yLC9^I;ZQC`co_QpHoM81OAR;D~w0TR>oEK}1mNRy`= zzeaAWpU2ra0^%*1LCD3rzHUXJZ_D&p_f$e@nc2Rm$(oSK5~j*e&O~ ziP6q2(WX;!y)QHo=I>!9+dD(gl`d|`gVqxRXq3Gd-q#~R*~*aV+CD5d8~Md*VZ*zI zuc^*kFv(*F^D$H|Xo=J@vv}`2D-mtJvJCU&$cxHto#)u_tIJD-0jL%rc}jcL_Op+l z2#!(*Q|GCpyXFq?jSC&oZ>y1Ji5;*D8Af7-yYh*Y3d2wy?z>7xl20)RKsq)qhMlyV z&E@ca*0qFGQJSJiq65OWl=7_1MzlIMhl|3io!K zON7F#XRmOG4%~T5kD?fuZCc%`mVA2a1F*-3y^o?i*0X>W=N5h25xZU0uouge?wYqN1WvgqYzu1B*t%WK|1` zhB=E>R3XGWtnbW{;rjH_Ar8eq@CZjHe;-;WJ^$QrJsky^j<-LoKCGkqj%zbAa$Ky= zj0(T3ysX4CP(P7X<8>z1Vj-e}UpHiS%y%t~%zFZLK7Z-;fgSWWer z()Ygs{J)X<*hS^ZDX{@6V%ZV!qJLpTwX)4%z;&d&!S^bHKmg|& zj9DtK_Ta~CQNWbHgjmGCAo5pD8t(ZdUNe|kg=C#2K3&mCd#1H9G2|A@e9SWfC=T}S z&ZI`WU8%0#H*FnJ_}54z8Jx8bBOD^WgeTbekKoFfX~y=!<|m1-LFQ~fNk2X+$;r%Z z#>t;=+VV9p7(G{A<+U%->7$WxWtxIphHx(^6Hc<~MmdBied#{G#i@V*L)P{LQ;TUr zC8=3_r19F3%k?O5#OToAp+%l(7joC|n<2g%v)u|9|j$zTpu*^pZ20R2L{p5J#~2>8%Sh=sV&H z=g6NmhE8S$sakaKrB3W7I-{2Jf_!da$$UQVg00$^(FE%%w?6Fzha1l_EapKyi6sU% zU%(G@10nXQc&8Bsu|4O^Vaobry<*i-h^l;#o{0p~Xa}7P*HtP2f=Iw!$Q|kWEvli- zqjT*M_9JM3;6FcK?z;D#c_Zlp`6ENjJ-4&FMr2c4?gYi4FpK{&K)k|oR~8(nn>V)B zZq(mbY6awz1KAI+E_3Uyx}c1;oUh-b(xBmX9F-!JFYuHZ%FB~0=$!MWai6}!0HP1- zH(WnMMRBja6lI-%bCKb-n(BcPHDLX&=J9%I;wrR-*gjuGEmR8(G-5N0QTK5JdtBdX zI=D>3w(tqxu9N6!B@5Fjs(n}+b-}?MFQ&hcV#1K~xg4Baw;YiVf&$6?x?^pz|EBMS zcPh!1O7xo_)zPwMzSo+U9`o+TKbhXEsXrDH+&nD~O_3valZ7$=gPmFUTd_N@+fm4< zx+)RGU@-Rb>;j++vPWSp8c>tGLBLQxvj@~PiT5lIJgMzP3(%e0(G|7A((N|q&FBtu zl03~OWh|?E6M8t;{+{Lo!rg+z>DD#OYNI^UQ(6d8j`G)VdRh=EJcZIhR_kW-N z-nc1UEzt9MMPD<}aj$Ss+u><)@aQG-XV$Z$1=)km{^_!udTCx@buA~&hV`3%riCs5w^;5pEdu!ca@t|I3fa8Y)Ur zYL2e8NK1Qpb+)WJSFh`lDu}i$)#^!t%BtkRbow*VcfLBL5p@!8p_Kb?1XhS!HtaBY z;sawP*y8NEf0KQt;LK?Ue4pa>auedoeyHFVPm7*QEzz2*qi@;5^p_S;eT8hqIXL+3 z;hEkQc&i>TqEt|Z;3FDj-6586F)J)5P}<{|8^r!#7$Qu%9tr$6=8qsGBnmH|t{{i8 z$KY%RUIjGlzjag|M=%3=UT{xHHucJU&aRV$1y5w$>?b}U0D!9CRwzn0R8%mAfhi*S z-J)uiGeKlEX4JOUzFnZQF!j0UY<6ePqQ5L`Sk|Vg3LfEF3-M3jz?Ai=FkRBSO3JzVBT%q2-2)S z=jq750BOiMPOAnos!n#cc%zoV)pHY#OR=jMVfWyYh;GB!f66H*)1{R(Aslb7Dg!2a zlQ5DxIV*(mPh-t72uy}x7uSPi(9T;^El}b6Voh*_o}0qr%hfo$(P3_;=5*{Fwwc+v z@SHpy;m2)cCu9HD^*mL}S$Z4@p!zKK#X-~hDn~gEFjSQW!;pdGOX?!Q36}tiP!Yta zYzzFN;gnKD;0sOZn?WchXYW+{m{Tx;K%d)o0)l$~pC zd;Gw5FYr%@1Er({bS5i!$iy2_NV!0<%P_>C)o7Dt{RM!yi}IzC(5|3%Y!n8T%g|bv zOS4+r)$^w9C;+A58S0c%=+n3Y@H<|rb;Ai%ofs~%Td=RY>L~UD6w43li`FxSUZNINo%K{(KldSo9{V5UCr9RkgqW@-yp>q_LPs&*lE;_E29_ z^+yh$@GxhtNS?Du2Il-a3z^Q8d!_L15&{yK?JFR$&NdXMSR(#U%JlGBy}TRMAu=7J z!pzJupI-A<03SRe`e%InSz`waUPpGZZXc9wDm1{B4EHf%vs*j1mAqJ~6#$c{kD0q% zBMA^HL6VU7P;XJdB&(p|!2~Ojd^{*{M35>5&*OiM{9Qdc503189P0jy8CA542%B_* zHPz-K;_oRNOcH=!xocie=nI-RAyOSZ%`;ktua;2R>T{{?LCvplHwAl=v!<&Do^^_} zh0sXyGtWQ$7WMn=SzlEPNT+ki0Z7=p>3qvF0h>_xwgQ-xEQ z%G*xz3WXQ!ooZNDU4@AW)2W-Dt;%KIot|1;?eQp9*I1zOV^ojWx)m*IaoWEXG$%$j zA#C3WLd=ow*+WNKQ8}WR!Z%is6(@vA7T!&+X?6jx5qT+~_sjXLx2gZyr)v)<7|}0E z+{>FL=Ks!ON2p@2#Ul6yi+%$nrcXs(yBuW!dHpF-j-e0D?B2q7W_%fNd5i}T9U5qBIz&fIgUee9cZ1x zEYZflm@)1Z_r3;Qq-$xSw|63E$yUhijRh)7H%6S2J_hz$yW7oPoFQE3ha?pT$z+v6 z_M;RkxQV{kdLiY1vkg}{H7|9Hu6z4A=TUmF6T`211r*4A-xf`)!692zD=~LofEYC8 zLHR%Qn*dHIk+uPV zI_+OjHZ5Qg_190^kKR#DMhw9OO8^*kltWWS8VFm>pD=BHyK_r0ainw zROPjC0Ds3GKj_y8&El2DmvRh4>TDOIXx5!0kH>Q}LDIG#Y~k;qZp@aBpCW^`Cy;VS z36GkOlCo{;?rLB;0vE9L3C@jjRIxjuFLK(=Z*=W0;a)r_~SoCt!rBVmL&C8a&Es3wf@D z@$1wcUUwY%9lq}VzHe-;%nqG6qbOxo&q)i{b((D4m?)rToL3Iy89S=8IV(0=+0WPb zDb;N(0PPJG^&6u@GPQAk()0tl+3l~PMHz*#yT3)DI_ru-(6UY217C>-x4*QY9gOu_ zM=VRn(Z%gyy5>|fj1p(V(UGP|7FufKjHd*vJ*ZNTZ+IcJ9~Odu=47AY-=z1NcwkOCfBJc#r+fbLl{;Rr|x_A zCO2)e8~zx4g{cUn4pVCMiSS`!;wLM=U+qF15PPGM#^>Je2icx0hczShMJnkIcS&7@ zvcv*mWMx0Es;+a1V;sa2O=dMikjo@=H>c!^d%t7A`x~;~S2Oi0Jy}TTZxtfmLyMC7 zOX_{vIyJGC(s*8hri{5sH4_ZZUXkD4n$nw zybsLsED;=0A34)5({)ibb6VY3!-}Syu{a#+=V8Gyx=sX_N^@R^$_jVALD-NOHYffo zhlR7%N1?jpu~rt)MSE>0S@8>`SIvEOPFhrznbRGxfNl6N>FrO($E6$TFv(qV?@^Fq z8{O#KUHA1*)FV*aCd)^};>Md~d4nGGp%mul++;A1^`#P_$46&(&?hq`E zs2ZGAT>*fhAKiP$H-`vdD}%3@EgvtQC0H`IVje8sKKt(@+-4hFQ40({j~$w=(a0>q zMH24M3wH~A`a#@q2}fa9*DhO}7X>Y2bHtro^~m9TZ4&iLZs5%gHsRlu$8s~4(~N5Z ziCKPe_BgPBr;~2+e9-`M0Mdxby`*cSwPt=9Letk0Ro&&pOr?nmokHBFZ*4Z&qC&g} zQ8_mOOjOC_ZHBU&Oq*{N2<|dZZh~;0Z_VMA%n)ab$lpEwK*gyO7U?yctB0mY?6&B$ z!N;w$A+_9B>DYtTOiq;)qFCgEr#k4-*F#K4@PgjnGB zVHkkxvc^0Q1}Oa&M=RuCZ4;Mn6omZzH+JOouVl&0me{aBH=K%dMhkK zfVU!AK#$b$u-a^u3R2dbgJM%ScV{$!+a%wsOed3OwR(zLg(NSJ zEjGMg3Lxq^cc7?&$w~vF?l-D<)3Q-EXX_&-L8z>qA}-9eR{iPpm4Ki`;d?t9@^nzQ zHP(S>Y+Gk|MvT9sJiKc6Ww*DNh=p#l~i6Aq1&DRO(V>hf0*2XO6 zH4ww|#(q346gs6`Ur)!!(D7nNeTRgzO4s*4_&*#Kb&7-B>s57ioDZWcyL9-@*Jvi3 z;(ot6tF}Qm0y)wVuBUdS{RxJf2A@fI*%sh;_ZpILC8m9M+f(96F{0|jQ>Oxh)#ItL zM3sb3F4?4ijo60Z#7#0EVPR3p(#$-utZW`+6ATlM4AN$nuF9C>SwV~5-am$yuQvLg z6qX9~g>NHMfw)H93V=7QC{JmZKOTp#fVprp7n1tJ zrv)AnyAe_Ai3XH)=*mMc+(k80yKC8u75S$0U3pdRBEk_r7^o+^SEGE8WEl+F&)wQ> zJQde)4_gHNyk6*?-bTcUP@9H$?AwUrD9jD_CSK^d<4(KRJLn?uSjv8lF_nFH50$vZ z7)xMMR{!og;;_F|!QCl@WBzfOZm!TWcThm*G&*rWHefB;sxdeoKhu%`5M2eUbki-~q3O2aQkY+eSHYB0$uxLfpjX z2QIzN@;oJkU^HV)%AhO3(&)H}0A3twvl$SuA*W}?B}W% zE2#OJSjRU+Ux7#Pvt6k0p`TVU}3SgRpBLnw!CizRwGzd)D(TfkjeqNOW_=WE)D?)s^WVvD>)60zMK}hGnt~8Wy zzm1HSl)p_+xjv|}tlkc4^fW^Of3sbubk1XuNCIFMNW@t0KLi}5>u3OiHkSI&;;q}t zfG`J&P~7}61`%PdNUZz-Q^2RKH}872O=xfxg4&Kw{o&rbr&(7b1-}H1(ZV%RS5^`Q zV7o6W$8f}AEohals)?gb|5BvQ{L2`G%pvLHaw&cAMJ$+Qq7xqrE&*MTjc#O1YHMo1{zYLu8p%u)ngAZNaM-%T67mPj1Ry9?7=N8Y z;^X-I{qmt9M-z5FtIfB^74W)#oB)I&wG&@6Z=G{f;Tlx% z`aoTxDu640^5Mx5-I2uB%l%aV5EZO?z@XSzM_kO6H9z!2O_^tf7u#_#F-+KgsLH=V|yxP;_o7rCO~u&-RY^r`t^gfaZz_0WfrdY>>(Mh-NOl#xT=4-3nLozh9j~a6t29%W?2NZzsxOsY|BT_VoflqM#YFb)rZ^bK-lW+E!fBz4!VG&)K2 z5?b8N=uF!9H&nk}EW@YgO6OL`x&mf1c3{f(ZeNNq`u&zjdDe&3vNSKxm@;yx7LDLx zWeP_-}^=GqK&c-JSRcXl3v`&6>E?Ww8bL#oBSk8(z7f~f2%(sbtit9B( zIM`}k<1cPU$^XnqetC$|qWC&MuhH3A?IbZ&Lz@d)B&uzs+#tFjGtJ!6N!RU|B-bu_ zOzr$$DUM{RQOt2(sS&uoXn%OvcAp=ZP?^WOVExzSo?3}>U&wlm_(0bN7Wx{`>0+-g z_@u{`FaM(W_(Gp%Ozp(G&`wp-ILLWk2P5B$X&g!gWGpOdFHQ-b=A()=&e-o1ly zlS5x^Rw8oUsq4^p7nA1wg=rl-(#wu}U1q<@e|~!?-DfTUt~fKC$ga|73pEB#7NF0S z^4~O-D%Rw%KV^&2q&I$&8ACh9NY6bvTu)Gd$;{PTXw?T2%p>vFDZb~w+|R80h);0( z4C+L{5p2#Q@Zs|uM5eL6HZCM3?W<%mu0XM$^(NpH7Tep3eHe@=TqPH( z7>bkb?UTjcJ?bqyMA|15XyguiO0c7TmMv({zL2T3=P}=2C|UM7Zx`okuO%q)N*(ZB zF%{^n5m|+g6Ud(^wxC$aNETeTc_FZ0^cq2xBI3(YbZn`1U#QCV+g6{pk^0*)3hiop z*@Ra(=akORcOPZH_l7&{al>1Kwip>7LmAtzVgNEbyK0%)Bhscl=yu1@IA}|BZm=mD zM~KsPna4c9X)Dg4xZ_ZO+&N}Igu4_z@d-WLUlr;*3A#|z3iNVXDIaf?&6Q!u6-mAh zSlemSS8>Xpn&1;T=(yAfwyl>R9o_a87VS0DLShn9h}NP!$m04H77|-EC7ARmJm-fCl zEEM-TLsw7CEJT_^7Dw;3$!C!sq21d3#EHslmpJsG-?OT%W+_8=$iXx?C-6~3TGYvT z>qV>ZD(y*oK9r3hc;f>_WI7!7Jf+UG@P$*7Cj!?E?iZ zs|wlhGZhP-wjK73V*^2AUAgv`h#z(5%IhPa)`H|u-@H5Vcx)A1B`yk@Cq#<>=oNIO zOxHKU2vTh@1D|fy#4{N7M-_$Qgi9s%BvVqfWx|y%;#$75JZ`i*tG-FYlB%8!5LpI{IMmy_#q*7CBMHi|w%G`kp=sam*kQsFPfy2*g>3>kQ zxsrF$fkdK|3fvWJM1Mo^yq?msSZQEp*23g)+KP*c5|x#e9q(+vt)}qg_J6++**RQ! z$N*k%JWr0!)&XH!UiL$MxrP}o#@Alr28XLGS+lY=DOxLc2c3oPiO2Noe7ZdPq^~sm zHUBUWP+>wmRS6WsqlIXx4UCw1KxutAa?*=ByCa5{zmJG1PjhA^(Zt9D{tBG?YpiC| zgRI1<4|9FVbv8R1C3^J13GX!t9hnVa0~aegv}1}Nx0LDb=grg|Z_g)DU<`mHc~Tg8 zq)0RMo!)(H^?1{AJ$$YN+ z(UcL*Ai7*nw^O!Mvi;#g!*zq%c!fd9G^h%lqOwlYIq zi?6zIn*#ZjHlR7oXVoeT>ii0HZFwV9Bsbnera1mrdQLDOBEZUB#t9j2Q{* z)Y57$>ONBlK+Hp&@+AMRW6T!ujk`V3Kr?7;6KKH`S%Tk@o1=O=rrJ{q4Z%c>u45yx;Wweg2t&_Eq zrU{R-2!ej07{eZW7jIjI@tPifrRR*TfhCOPd!f+F+Tm8^vA}@42maBbtzjQhzPz@AEj^5c^YufjYzM9>Lwr5fZog zRdf_K)S0*dJBEi->75#Vcmc(Ts^wG7YWsMjo|E30LrGs2JrNBRoeBPa$2IH4pmb2vwGxc?~V#xI=7fWf!%lW;AE@RvL-7^BfL zdtNm4YNmJI|21kQ;{Bu9T!Q$kV+Ju*7{R_OYve)7XywP=A4d^up~_C38No>RlYHf? zaZ=)iDkS}ccGWZ8Faj@;GGimR^IabAgggVytVkFWkmH=2oAa9qH@us`$41N8G0WsZ zw+Y(GSl8?3>T+zR(#G9M!N6pkoyhGYh{v%+C44_^Np7w4t}`tsu4p9y6>(O8g|YT~ zNQ>p;Mw2^;?}accs}ip9yG!`y3x(IlOg+YZ;KQQ6Z*tXinx2ble|b z9v&|RaUxW(ZKIwOZ<|5^8+SnaR1#s5y_Tg|P0UyU?-j}e@IroDpuB0p(dmHafUHPj z+kVW2sBrDB)?yjd%;IqCj9LH)!#&+nrsGjh-P?IQAg<(CPT<8mo% z!!Ba2)x|it_Isu320{Uk=kt^1_vY{~2Wf-Qrc>qR9Pvz>jxyS08c$CSyDL$jiFWWa z$wTf;zW?=1*Q;$Q`5ED@?inDzn3<`RDJ6lzsA>|fMr}KMvsCwfXLx%PwlMvEA0Aic z?Ky6%b(RNeemUzvdvQ$Kr-fkmsXE_s6An1^&y60V(sb*`CT(bV5 zd2lvjd~-pUh~qVCRK9`K-#=J4Li3clBD{T2&tTG(dyuK{P@%J3hj48#p3Wa9Vk8|L zt$4hqdq;p&b5@roH2#vrDYph#Uk$ci{%XAS(nBT?mnK~HTkh`NGw-6<;h`*wJy8Bx zAl}Pp$x|zIfa`iUmhL3be3tznNJ4;S<7rhIBywb%*~Z$b+}~jkM>v4r4IY9yD!x5D z64Fb|&s6L>lK>fQGK1gDRU>rC-&aEx2iuVgm-8$tpMNLukKseEx3*0fNxFv;b_HVaejbq@2I4Pq4+uYcWUUcjEN@h) zil#yoLK@K7Rrk}JTBiACzd?#H8Al3I@XH8)a!Fa?$y`=;eQEI(U!zHY&P^;uo9fxo zzO#_{$zP}Glmm*w0!NF|8^8N@x)5k#A*U9^aWVw~ zHM*dqbo9R`>>Tk%Tt6^YG{p$NUcwwN*E4dPVNR#p5evGop^@>=J~cwdT$vOe5<9dX zgeLzYTqx&C@+OTQ^l zf)c%aZv8nqBx6%xq7cEn|3Xe7piQK?W6v-|SQ>`Aa){KaeiMXqOxRI*QDn_|zk;q6*O9&LA|m&Q9>dB{e__rF+%s>j;&YiHOz!9o}l@~(1tN-8_|uO=fMhk z`F4nz)PrOcQBBn-&k+)_cPfzV_r_qc2yEbi=1oOQ_6h{6bE3?5`Fm6i?$7D z6c$YJW#7HXo_o%ucfUAT=wPR}d0~VX8AM8-^Jm>-KUP~GA$@cqZkCP{?uu;BY6i4W?I{&ASh z&3s(P-`El#bNkDU>b$ONx5%cc>+OF#jdv>x`f?Hl3VD6ppM0g$q2UJnMy4rH z*r&3)t#032n_ez{+m`|Chvcz!jF`cIog$UYEM-weUA^(X3OP$L*2Z_0>5QjTM8wT|CdDL z3}2zPBfgBM%leP$s=TX66SY^Z_#+Hm?~VF0*~dID*4zW0ZdWJ{i&ZElSAp4!j0JVZ zD~kL#F|9|w3*_0cp5P%-vdSSnn*TDU_o#{rkUbo99Z?0Zn9>2Z@qENfdD=58Q4!kp zRGA;fh1tC#*vLQQYt=UbA6k1Hl`EOOZ^z$$NDCbS*d<) z6x25|g(eWTTx|zFN1o_3S%2)bj_TF~OwQZuX2Q;m0g;!g?Y?gGJe3;QE&C zj_DdzzVPOggF@BJ8GLi(-v1&-k7?TcusOx7z?_wX|J4wj4IYGJK~*HBBPW0+j|l$} zgQuQ|JHRq(mIdoI%uI0xiee`e-SG>oMgsiaLNpNbwVVrrXcYtv!HwF;8rN6(K6(cP zj|^Gu}CL;u5w;tw(khOkJaY{QQRqfi6QijGNzMnp9e{eU?*WL z6N^c!Wcbe(^Ze9E0I+X691zRI5Bre(m^3&U01^jz$U9~fyUS#yCVzc(0bgx8Bhe%7 z#^Kw*23v-5+wZV7FmER}3tkG%r5py!NRPm=uW2Ms9s8$@nw@)rwH-pdEaV{zgFylS zJH7v#kNrwS{tab#WbWysva(_$*z*x>-lox*$0@{F_4zn$?$tZESMO&bzvyQ?xI_~! zI;`H1gXnOS^HRt_ZPmUA7Ldaz_%=XyxPH&bnzFGL7ZOdU>s!|gUsuJf1h4$zw1Q5R zv{@1s5}A7jsqK2(^3kOvF~_|sNSrZIsT?*}tx5MF$obv;!#cR2+gACEo%cZR$PxLj zGI1ZW6@bpWgQ6Nn&?s#5)Au0VTnT^+1z?A&^q9Zaa--jJkP<$)gI;{ygPPIbLZ)QBNDbA{Ax04oj4HkB)mifqvlt=Z z8UPc$fO${HpfPEJ29Ex?9WD2tZU{qZy5>lV?sxs4^Soz_^9eriVUNAI*FEPof7dn7 z@qm6Ua`*8ft3UeY9*-~15LMbXHHD85$cDaCaatZGcn+KDyCK~_|1~d}ZW95?&AXG( zc^KEEu+`n@vEM{T%-ze!Rx^jFjtSF015K`ouyo4>r2z(aEHatvI=iFp3*$=Q4ce+L zVeH~*ef;e)l}{og;IvZB%j5hkc9-oaaQXH*TNN4R(f;mh#FF4$3yyCL(7(P}%;T{6 z#*4kO*6i}%CIH3r(VHquqrFzJU5>e;)1vt&o<9rXH@JxCD-YlRhoeomf|Rfzw@~mt zhFNr+JS1wOCm=Q>Vnq%UFpge8iahZOLjhv$v?C$ayDk2zs;b#6e&goXlN$bHU}P>V ze?;d!|LU{Q>mN6XCTLuFTdcDa8FoIUuW-HDa2mMSSUG{fOztFX(oBSo{#x&2zkTja z&AXeCzC!(jeDk^Blj8CY3p$Mo%>)pG05#$N7lX)oM8%${a~Bbx)pz5=qQZ6R^En-f z+G`CcP>GYe+)FC8X}*fI*u5JX%Sw6r7<(l*(+%{`Y8m2hzw2U;Gw3g-2DtvgVwx3b zYz&)R%kUAu;8bDu`d54jV@P0Cxr!0m!37sj)Pm`1yr`JzepJxL&0I!IR?$3u$gXU3 zAOOt|UL)Mp^_N*-r(@2PW5q*@(JEVjtr9U7W10S>> zdJVklVqpGwFDw=K9jn3$P-4lK`t3ECJv+h`AqKZ3@UlDHsQb!i)P`si{g@cYrAH-h zmCHCaALKjyzA^*hBPwi87wi7yFJTGAe%F+0$z(%FgWw-i13`;pRZVL(uBoE)d{f6{ zg`E~X!TDHUiN!>h-xJz`V%r3sx9p8PyurN`*b|07sQx)|$kQh;2F)CPk(?mA%>Ya0XIqPBbvy;;Q7+Vr;VDWzTOqWR*y6KVKN znEP(C-bJJ4D>ktH2YY&hacZ!>-|-iT@ze8io%lDSriTcd24Z+7>)FJoQe>dtF8!w; zh)QCt{Fo2r+uZgV{Ml;X+WP8Y)a>Ht{i(s>3$k|GC@vOQDNes49{db}({aq?L$%LQ z-O+_(P!~~<+SzD~Gez>bY2t&}Y~66w<3Q>?oAqD!)CNv7?zErzca6Tg{G$u_5a6_? zc!!(9+iZnY_>Y0{IPuPK*pAd!&)hjLc%vr(VnFsF56x6iF4)Eq@wUkq3Lu>`%pTgt z`DIo~hf(ZP+>Rz)znTebU&)P4-BMPDc1__hmzWF7*=|u;s3o~NtgKf3BbHPQ6Xq{g zBj4~X$*A$O2#uIX%MCYAlhM3(W3g=0b9y1MzG2xGPV<51e)9O~gmrP~T(VtD;o6!G z=r71Iblaw~{jJ;BXfDH{Z2-X~rH<(ef&%@wtA5foHPzDwKKCJ3S*{#25%Iz8Hp|^H z-nslFV>wtrVC&f;VU2}y$1)A2{)R_3{V8gixyn8ulK~+}id7)UfO&R^68(OO1(p^b zd!{&)BJY<`S0%1-TE4S)oG2uNc>3~Ff1xTOb-m51q=kVGv9QyQhTM*=9FFKYpD&*s z+2h6IV*C%>SYFo2Z`}XETGmG%$*QreQwJYbNoR%}>C`1CVKGsnnKbLwMFOK3H4X$#GBHOhB%aGt|K|qWO&lv2mHfmro^W$mY?_|> z9JFHi*qTje!YcF4qXk@yYg{3S6-7^xR+V&p_ z*IE(fpDBGmMuoPVkb1%WTk$8OaQyi5^T7g5Wdqjr-#=cwdxL2-VVI(WC`E7w!H(ro zqAAbb9aPa;#X-6vIw|t4`CjYib{6ytBLfFOLIjrAXM`)6znUD;bL{0E7+4WgE9ONV zv0N)TAQ{6_tuyfbGN|T{3u7Zo&iV$^V+w9Z^J?3tea6|5j=jVaJLj_JWqB*|&CyLK z$9mXLOk{)0ZVBWtls5#hv>G=tS6E~=5!a{RR9Wzb=8(i%&X80jOci|O#FeB>>j=W5 z9D#ZbC@;*J+^F9=!fW8Y({ks*cvQ2}wK6Bfeza+_m|1wTJs1&wLmGngj(>B0#r2F0 zncy^;lN9F%oO|l=bGFmj;?y_jzG4w1^`@0FFPr z6wWOW;hbA*s~jZn`FTHs9Y)N-RsBzAOR1+f`xMNmgXgn2fbj>jN~uoe8UezI zKwzZYsdPl-V$f9Hl{A;iz(4;#uaH%{Q_$H3M4MCY9FX;U^xW5ueoxM1FhDe4%OQcD zq#K9lpDeA$tv3~2s)!Wz)&HYM`&lZSc*^~HnY_LtYwh`*Om<}N-P!rIzjH9fuP}6;38o6jdi^5;Psth_0L^yDNevD1D zT~WY4ZcCx^c8%u>j7=BM!-B&j_b*b#!zjN7O*vCv`kjb0@w72S%;S5xH_>xouw4NG z7PxB9VmQp;65;L-)Ph#M?-4LxG8PSCRj=5dKW+55?}-{JWG_}c)9O2|06lhJ=9Dwr zz0TVz_BJXC#@iY`%FTXsO0px|Zm@ zqnbc~j(zx1$b=Mq5^AW6>(m6A8IF>zrr8)jJW^7e{s%}tuV@rhBdF&Nkx`rY7(eUE7NI_5LTpor=M;2KgU) z#4O@4EKRbtiSTZWSSXH4%Hyvj4pC)6%?c@gGd`!%n=EA`*7+3G^}U}Dk1At?QBks- z>vfP|bhgo~)L+^GPoL+Xg4)AaDx^~~E?X!#(i!8DkQQ*7@i~UXQ>vt?s4z>%RMHl7 zbuQ);4-;`*UuknP{h8y2jgfDjmQ=_xMJF8!!juUdZ)3n3*=GHcI#=Isqx*2%r!+Ti z<~GS}8Z#%<@!TMGus;)4LUk{BMQ*N95lr;BbZuyF}b zQ@#3GAtzEP^LPOEDh)@c0eihMfY?i~RfsDHfR+yT`Ho!kftn}@ZT_3>$L+e1k-*BZ}k3?{^oP z*H_p;w%Wzsxk(GQ3v#wyo&9G~)>|kJ0?Zu|_Z0-zI*PwX6IAo^EN|8K_x*^A!CbmN z9&nrK6u}v#)0DV0gHnO6w+4$`j7}gYC}g^3Qv0~K^S;!q?9_T@T%*H`_33VG^o~+P zF05cr@OpgYJgLZC33ox%3i=WgKsx@+L@D||pymr?zeqx$TCnbGMc0e{xHGC=lfADt zAxCGUe;cGhu0(j^&rCb0~IM&vovVI4RaD4E=rFsUUklTWNiX^e?sWC_~IB-SKAZqHJ54SQDNFi zreRw~&6uvHDiw|m30exb4|gQ8^9IKX{D4`1u?@0Am+AHZ*=0Nh&Fo+P9`p-c6}-#O z6RA`N4MJ=TquJl{r~MzXksH+e%FbFh z5`fv#pNq2TO1sl(GlCZg)@#WZ4<;N)Zn)j!T!FvdHy@w!ry_Uh7in-O7xA2sbBk0%y}2vn<5w+aoSOv@Y-NqHjt>f&`d0)9FMIDLqKOC>}Mf-X$j$I9m5jP#(mdw&{J5=1jA`|Vx2&p%pxT!t9AS!(O;@6Y^Aaj0$ z{1mr!$Ltsl?o~iqmBoN)8x+^jz6sELZnw|XcW$2oovmNuj@;6BYu&^GH44c5H?SO?V-mXHwevz+V4A@7a9m2Hl=Ijzic{U=Z;~h9uQqGvPE@e%#duY(z45{> z(ckW2eaUX`=U@K6maDWwT2ph1dcRA>Pt#_9JO1rL6e88&U z(Bx~<*`@6$Z*_}Dbd)&2#})urW98W0NA_XgBkf?Y{h8qKxG?@Mw>UIxpT2qA?3zdX zmMZsSMJpbfMO3~F1Z|qO?Pe+7lVNN`r{#JwdLFavs!q?}Y#F2`t3UGUG%k3UEif^= zuGp8l=Vo@r-~Q`aCU5XWbX|$n4|G#2e~gs$oHjXfDyEXIy(@h}io(SQvWIZ_xPoT| z!X$^;`9HiZCqC;c3)f=W5{jK&`LpMyaE&o0y4ieM;I09LS}E>6)+58fH%%+CNxa`m#4{kfv=w|8$dNcD&%zPlxKs~@VFd=!UB9@igcq8$!_&=l%Dq*S$`7n zzXFHfgMz@X6+S*E@(RkOsgwACJpPs80&Jo1^%_m&NXV;Wdf|4o-N0ydhn<`-{ReV6 zwS|NY62A9)gH`Gmp4YJjxeZ*Sez!C3=SbUUTer}J&6~6h_*zF6xo5U{K6u1gU0umPB9(kh>U#kSl2K`y?R%`3Y<-fK1tEKA2M=w2~E%w+)J$tab4-KL2ya< zH+(~$`<^!``ro-7O+f*f^BEVj-DP8W(5kX~3JdgrcY7W77PlhHYfc8zm!Q26m;Lr_ znym)h0?~w32Wnd>VE6S7?7nc1w%50GF3$ID1U#6MxXAzHsI}B;P!V?|fQrte)}y4S zsRJiny&v46mQGYcESpgj$Q}B+9EL+d)H9OE!6p_!55YxK5GNW_(bxrKR+pml2$)pA z+Mw0-3?WK@VuzeI3QU?5EO8Z1A+4p{uk^J_haZ{i7!K{0(-*WVh!{Fs&=nYtacaeM zx7ISRy>J&qBy8{UMKvq*8{^yO$<~LHs?Zus>-G|uY{!lYcLqniCJ!LYMN&re7IJ)= zYz)Q;$i|xWk&DSW1fx}%jnzLx&VKZvOs~1!GdpgQHAFyunGana^=VPNP~5DPx)GgnXb{RAvK}8 zG$DKACSHn}pzjWPBu2R0Do_3}C)%Ef-m)f;{B2=z<%|rwI1SZIJj;|vx?DKx!go3{Qnykc)JE>{wd^nosjT|j;DJCf@)+2iL zbzAS@{`@)N@(UA+U!CEQXmC>2@t5x@vVQ$FrYXG$wF~l3TilDu3&2yr!Vr3*wKBE) zwv|EE&tIt_!o1%+0^*}?~rHDMK7Aov5Hd-$V z{1?{i6fXp5>$Ul?5R#Y$AmQaTcD$-q#@o>FeR1`1B~^&1bm*@~`OS4(f!ifAEcHA& z%*t^+s}M{C7#(cszWNtt`I}6HxVcVGx121z}waj z?i!L{&+*0&^c?>eRB&g8>k`l0g>R>a4B(X{7^;j`_#(YRfw>*6NPqi=u1;IGU*Y@x z`=c`=ELsNzpWpW%Dx6cFkZQoEFpEOuyCV&xl&M@(pR(LX415wuQfR!2on6|>g{6Ws ze`Fo=I=wQPWP6BIi2a5XyqXJR@i26tYwg_#zyyaQ$Cf$|=J25k`_S~Q_XJVC<^*+> z01)UzR~KBX{4FobhZk9VY=CO}XFhmvXzJJiGEaMR*gJPQxv8hXR#I zK5ALgulPOV<1D@&E?}%9{~8pLrMD2!QalF$vtPZGaw_4DU$w%lzAHrO zSD;qfJ(jZez0nL63vk8a;1@o9FlBqWrh~etu)&m2+-l&VlsWxlsiCE=&X&iU70f_- zILTQ@S1s2wXfllH>wQ04vJ!pfkPzlh6BIpUuTbSFRc;_nt5t@%@fT-7w48iUEpC=H z>UD)Mm0{6a5b>T!gvu%VepEr-y<1vmFh1TDTXm&H#bQ>BOWwc8>!xMq)PovSko?T; zJn&!w|MDFZ-!z}JAZ;xLR?}u+!*2#qCb=a#)NH=LYHS};Jz#|fb}=*CcU0NsAQ0v@ zz>7rZxQDJObG`L=Ust))46U(2IBAY+?BYJDf(kqW)|o6Ksx%h7|1^vUXzK8DCj59) zE{3>w)I~Gus%&ICs+-4T^EMzdzf#ir@&k(236Yf7!9YQgmt4Pc++Izl1Vv(-{y<nr9eemeUpRq z-L4g{LV6T5ygWpho0oc*`nPf@xXjyKXJ!y*VZ%8?5jh={uaDXRw1qjRU+N25>ZPq{ z`#3_2_H#o1N%s1lH=cr`0J=#B{6Hgw^A zwEM?69fM(|Yr?)qpuK45m)KmoEXRwtZuO^gN<%I0qo;EO!5DN`0N^T~J>HA4;@iU$n%VSa-|r&Qd9Ba(GSU>C6gxYNIPE64#S|35B$!FX$Z2k4$Wjha|m08(ni zT8zc05_T^(WG%JPln7R(Tzr6#k>P;1ms|~jX&VKeU^aMRi`ZmmykXwYy{sh2w587G z^PQqDVNSqjdM@at?VxeBjmMcT{o&U|p;e z{m@9cm*J!~f;cp#PahXBd(QI7`*#_3@Y^EzMc_f*hl|WIJ{Ni?c2E6)45TTbH?r{%LBoh&FY6W8>g`-wc%zMu1o zNI36qyaotLIjbU^Xb-C-^OAnjl49I|&Fh{cm`4(g9PBwWsCzv|1iXo8QdA)HeQ0bSURPhx)80h#+-XS{ zR=BJ)5vb9Y;!o3I8|uGTSsC%h!(oxstfhih`-6f~DQ801q`&B`yVs|CDlZn1DE25E z)W8>_XnPhOVwm>Q< z;Glb~m6}E2UYT^w$F_4x7=8*v4;T1xHzfh$BhaV}CjsH-4Iktukw!P2X>j}HC15$z zcX<7gMaaKDH;DWNydS~uHP9c^>hs@}wAsjk+UumARfE`nU;##KaE<1Ay!7?I3B_H6 z9%%8}zgQ{3>G|BE5wG@@)(8u(@V`t4A=37L1JaGJuIQ(*nbK7SLxmq%$qzk(w1wt1 z-??m_PD{cd(JTJ#UFb+Xs1|)U$+a{bhB^~2-&t8E`n5ganabe20#qjwVoe-)0QEw&I8a% z)$k&|r9usbFoB}fgeWOd5!FS%pHwB_9bcVksaLfc1;QE%^>_V5A7@@o3 zRfv)tu}Rfh4K6VkIA}{FJa5gj2x`(wHe$x4{sy?sZ-)~AVw4X|-H4Q8+&L=Q{Z;We zyvqWHPx+#uF7#=m$Q;7_cEdIj*Y$RvYnzkSQuGw?QxQQfyyS6btBK~Gp3vGr%v|w6 z&cD@5m`4#n8x%5~bkTLA%Y8eJKl)y%)dumyqDMfZP9-Wb%q-fpLAXFq!&?|mZ|F^D zfP$y+-rFTF&g!_yb9V0H&?A+*Fzy;>HO}1es#X|p^y0Ze}3ySkROZuH0*8rdn3Z-aGFPYsX?w>uvb1q_{Od}kqQ%H zP9rtnId#{F0PV-Owx{KwCI2ow`Yw_+e@wr$%x;Se5m=WJ?lpa|%}}%K8ugtqNXV~) z3()W{kJrYC_x;^cBpq3%WCqsrm$+5F%pY+WOudkkZ(53angmZT~)M^#$LLJ5K8l8nGhnB|KeEM-}9a_xlVw9HfKO( zf##tB8}9SGAU{}%W2GE&by0Cpq4o@>MP1CxPp<}&h^*OsY__9(^gMRk3c!m%4fR|3 zy9(aJo}!Q0>rqA-ZXN%ML%~P>8a6-X_1zM{t<8wAQcfpNE1#vBf#B-*I>iYuZL)~2 z!NA}qni5%A+t2rU=S1V;f>$qLRY_w4Q&*uZF(16{vh+O;s#Or4x82<&KQ>)ukpo;# zm%1TOlsqRgVgPP;Tz}&RdqF+;4#{T`7t4H7vh|F$$91`S8lP9ZcoPop-+-R_L=9fL zw}NH&3eb5f*P#KJfw+^)AKMR;TE`-iBPl$};$ZW6gOjcyaH4abIB|LXJ@?&e>r)B_ zKQ^@_w(@#~Asfp~^0v>$8-wGdb| zb(AR@*$ErWNo_cVz}3!?Ym?s8I>CyJW9s)Z61?Ajo{~$`xhKr_hkLCv9TWDd$3VWdA?~%~^EM>F~WmzWh87 zj*S*%?y+}NFK^x!tEkI>W2>Im5H&E$ul4O6VP2tRaeAx*Yr2=}BY%hYyEPxWmG8|< zctxl(yTUcf%+0rvr-(4!hsO9TBEpjE509Aak!axTjp+Gx1Z7Ywr7I4uFLe*tpPQOx zx33E<7ZyCOQ_BG-mp8ODxUpeOf~OAJrN|XEez#|Na{h=gyOlNWk2Trs%AfZMTy9{K zneS1%pFfd_F4oZPrfnv!;sB7jb7RL>ymIn6@BF=Uy9Hd%0SIu`r;=mkrkPlLcTD^u z>)`$pb1`MykwzA-T93LyorY1&RAHSvQS{A4_P#zHK>Zha?xVK1HOx)s@LObHS)9e$Jajs@gn(s zapjr6O~n}=BCAc1cOB;a(h&_dUX{JSJ*6f9x`GZ{FBb`gUrkZ0`xs6)=XgaU;-d7V zzUDmKL0A`VmL| z=Luaw>f-nDC^Mwb7P+_547)HZbbxh>@Un&ATCiy!Fm94DnT)!O80*bV{Ua zwe-Xo(8FZaZt-t7l7zlf`mK;ThrWmf zi4StZ_UlvRtw;pK%g4OO#|-=IHl$c6`pg|s=$BAu_*H6 zZpf|K4d?!!>fq1$7o)#AKnPKUwF(FKcaG_M3dN(9E_~qc4UdBU4lnxz0R2bvd#5p; z+5BHkCV_U;FvSN)u*&%)O@>6d>g3G=;GSdLY~Rmc%sD?xJNHF6a{Zh4hPS8jNLN8M zN|N7mK8gMZ32*RI=YZRPrJ8$K+69$pjga9!7k>!IZWrb%gEJfWEoKe&-TxkjVV22< zX!aEenrngK<%;F4->R9}hn-9$KsX|1XWL+B3*yuYiH>M-V;w?OdfQ43PO)r^g3zQ4 zxU)rt-+F6(r?%9 zR^TyuwQ)$`rxU&EflWuV(#7g>V~u%-4Wh0zBE0_{t31uJ^%GsiyED%+eag<5Eiauk z$r?Xx$3QL{6Wd+qW}6|+yAzpyc@8EZut}uxQ(d<7X7`TZ)iL=2-?(`M8403)%jNtC zX7`ZX^3_Ky1o-YwKD7)9dhkz*ps0cm1;+Q{E@Gg}lVJ42G}Qv}(=cls3E4!c;-lWX z5I-t-Rk7C5fMtBO*aB_Bx61KrJwdU-t07Fuxvxtfn~SVWY3bu+sX}?d4zX}`<7R}_ zvLeYRG~_v~NtC7BP86VvCBg7BEg?6TvG({UpX#nqHV_}mgl}YS1^7*#&y8em8adKn z8P*22&nKH=A^e;{LoA$Er1V7AdQn-%f=OaRu+1Me zNjyVj25(L`lO=t32pCv{v)idEH9MA@gS=*yxKYxRcx(Zf2j#)_%Z9k3rW3&x1Lf9r zAB+9%GpT?cK<2ZP`CVTyaj`a4DU+>gbT&aI0Bgo-qh&+8E6Op@vUl-l^wUd~nN3?s zdUE`WJlgPJ5JlG>7q5rw44`+V=n!FoU!>#LR`9)BCRp4#t}Np3Hgjx(0KZTQ%drm= zU+I()Te&qyhTo(eKeUXBbebN}*T?{yIF87JxbZwCo4$s09#fiS&>GBha4;*!NsC-jwH{tg1z`ou&W3||9=ejO zR&My2>ECV26&L(3^ZLEF?U{{tpipn-k?H)71ju5w*L0O9xRgMFtx--^K_w~w$>9FF zAH(VK_)8$cd6rB;Y$%#YE0cCu3w(+sL`+OH^Yo>w1+%iSGX;B}lPZ#c06Z)U{onBii5n zaLvQAsplEimIr~$gv+HiRQA^ix4infI^z6Ebw}TGUo9@%K$Z0UH)MmGYJ``s_M#T~ zeQ@Ic=nNke@$4uam*g^v3q?+y;2!F&Mwh71qVA>^zV|F{~ZR7KiZ|X!ZQJ7G>Ty0%Fz%GznuycKO@G^ z7j~bCCh1Gz-Pt=OJsMDII#b^ESwAP^dA{|v&9RJq{<#GQ9d`Bihot=3+&A9u4@!kV z{w0F^1BbrjPu0(_-T=Q6*G>=uUe#4fqJ4kc=!0J8cTRb^s;qwXT0v!X)bGN0XHg{K z^VFnxQ#;jR{v{Q-%SqHi5$GqaAuj4%O3loC?#m2N0TY&_+G?GIBAA7UaNqR{W?aku zr^S(*S&-wf`1)LuK-)vo`#YCm{b9;vRLh$Q(-A{B>)#vj+Zcvbjp8^ zR>AH0UYj@&yk)Fmy5TL%&pGx@Q%nB^u7=rm{}CEIztL$WvawjXEQB@ zv)cz{4xgW!h#8rVm;XuUXU)y6h?h9`pA}T*H>beuAC6`O93Yk!ozkdrdG3^E=NyY> zs)xbO8f{xxz`Wz3GT5Hr@iCOnec^rk;@SxEv=_Xi5;b*S;^XZ1<2|w8U7oo4^xG<; z!!hA(AR2UCWHo43s3bm}pe2L(%a<)*$zOtpBx)lY5gLBLpZ_HPi#a|kv%_*cvk<^N z3ZLd(vj^`AY`}@9x3Jw|hzxi$pz8?6WmlwEPnFowR&c^^ z7z<^zSim7UU+%Z-+Tnt7?yI(_;xvDud((1P=>P-D|1%hE18hzPZU6#zV!eeCF8fyKA@` z7uBn}SZ`}}d*;CRQ@d*=u@ z!RBZ6%Np*eNW8q^#V(%q%>^rY2emzzK+H4E^=9x z@n|HN^&SzquRFHwZ3v7!%ofpRL7mqUbLKIR6sxpU!++%5WQxDkTDbz2MS*VgU*7qJ z9u9j{M^jnHBmmo_{Q;TN){bczVP5@X5apW|(jg@5Vmq^MPambO{a#k(zkKwhh1BPX z;WVYHe)n(cbc_AEV4>qOPlI>-RxN{m3rdg?`?*`*kNGt%WrycCBw%7T=rwYjp`ML@ z6g^;quxPVLb6&+p**)I5t*|4IyMy~2Aq+8R<06fwxXpFP5F$Bw3S{hMeF-m%J;GlJ z=I6IA9c7OU$(&*v_#y7)umYZUsAY9}t~tMVKx*Pdv`G6kRl;R3&Pu_Kf9f#_?aFu_ zwXcwS`WZq~hw2-w)n>gdOgZ7f!%%t>aaTDW7A`-qPqbh7OS%_3`SaxK^&!Y^>6 zUr5OD>l2a$%_#S0)(Eh1#x%Y`shQYm^@yU-M7qT9b!)CyM#47`=wu7Qv5vkp?xs)J zCdG?8MJq&T{?#tHAOVoso><#?p_-K%DXC#4{_^E^q>ci~KO|@u6x}=GCPI>j3R-yF ze!=j0tQx`=8; zsB*FD!vxsXaGd^KhFT2W%5(3RWbVq?g+<^ag9Q=WMV}NJ78f<4r#NkAlsCT|Wj#>$ zvOEVF#yW@Z9nW5z=*e8$YL!IU1?k#~QWM?y!!V&! z>o_@C_@_*Mk4i=E<{X`E$K%w2WFbvClZMgx?y0JnIxtJsq)sc>JvlFb&^3S6{PFdFsu!2MY~0j*Zsz)sBMCVP!j?*%r!@jGgo4b)J7K>ZQK= z%s?O9GwKvho68DQ=?oo4aS?BcLvWX6@m1_{_oUp#@XueH6s~5W55RaAd3JW#7PUk+ zvJ+GeH4S%cW$l8&T~3<#nXG;#MV?ZwTmSd`F~97&98qvf=_olHT~iNe*BonW$ZVQC~Xv3&Z;kp~luj6x%&meoG+J!2b zU%D?r?t6Zt#+CvvMK31C6ua_|;k}eX?>P+oNFO~{a9H?of^sPqd+b}mWb1C~+iHXS zY%&RbF1`tntP1h8O*{F|vGE^Fy@?9%wkT8Gh&Uy`>)Bx}1?MMGK_O07m(7Z`cE2^{ z

s0DekMC4}Vo}QjJ~3E52!?h=TJ1zkKIfjx%-9=2Pm6g2&(Hu-AQ_2`$c5XYX77 z?mGpR3w4wqve+^Gvl!GB!trsKXNBQ(sU$EXeqnU%1r55u5 zT?qWg?Dw*4CBG4bDC$)~ss&v5OPnu+uFZ95N#5B2)RIFlZyqK6`=j0CWl|w)Pi3N! z?HCoeO_g;HP!7P9N-tH@A-GhsC{D{%+4Vc0l>rG<3OO~1We!_V_BUpnS6PTcRhrx1 zmUa1LI+Ky>bUaaDa(c3CSZ|VZbD4B0eL2pl*lnW4f+>g9jX|ke7VC3KXSI%FBdh3A zWw5}E43?Vmz3-5mNrz9>lQ16e1?$7xPIi+yXb*C8QL0pIwaaN>4F%4L)|K&Qmn0rxNWJU`!gbbnJNiSU)$X0IS}IJ7 zfI)ED?IVhdw&ZJFd`rI7lI75^_KRgEaXyXq+&%UyGXM3rz7()<=Pyd5wl?7Z0I_sO z_JWJQ50zqxj`TpN5K8sqV`7<#V`8*+g%*_%Y!0{Eo-H>C6>$O^n6v;il0}$pZla%O zQQ#8I?kw%BtN;0YrOG#soy$LzjSg3e*pYHE0J>&glaj)?x|831Qn$l6Bxvt5E_X{k4zl`Z zgr$|}011>_#5`TeutzkRaC4@2H#Eoq66C5=^z+6e4YjMCx`;*`{+@#Y4b7FBq`(uc z!z%zvLeI2yBC3XKxaiCa>KR`2TZ&dJ6X02^Em#*4dh+hgNA`LVRwXPr0k2g)S>8x< zp?3tY3AQBIH&7oxZFG@i5?%Ya{94*vB?Y=W$+f~~d3lV7 zl@aG`o?cy!sdrN?m*2HzN6niLRnXbrH=)u$fs|52p@`Mxs8P~|$9uij6&gkXAiEW| zZavxF>eKvmF}0T=`jGiGAK`-LDl8MX+z)=Z^fiVYqHGIRD;U0N7eJokZD-^ zI~Oq*5a^bjz#%!a{scx4d%FrTVcU-VkpbTbn5xM{F;T<)J41b+h@QG3#+j&gv6 zu9dXFjH(@Txkd_x^-LrNxIgD#JW3JxGa$uW`3M6idM;xL9HHG%i(S#q{00rx7a_kk z@u*_6YHYI32ts+b75;huGc@r8U@Ksf#$#O}*WU*((|aSnnkXJi4|0JKHT8rR$CX$FX1uhn(=UCetiFl(3=EjIq>E-e{}?}-F{eP|XR5TF8q z7{Hh1mC;Dn%z};c-GFSl3tLB~N?u0oaan#X*NM*oIJ)aLk@Y12-lN8XTAnSC-DK< zQNiCvr;b;Y-Q@uQ>9)y`G4>bJjP)xJBRB-3XP#}XftTS|U>`l7Vwl;QX(}5)ll2Jb>fP}I(58kZ#qhWifhv&`lxOJQ z(0wN>1ZdXv{hRPz8Bhp(x7Z>_-^}ISF-iF^?=4wsq8#V9d|84~<|!Cvg&U)tN3 zS_j%@?47odSeTgd1Ao0rF{g?XB7U%E8R_R>h*K%SlG#Ru|5*3$&i$LG9r_xm2Dv76 zVftXXAO!2Hr6vsZ_cn#}w}O;oahKmvi@xr*V8eyxOWU%W#fPKX9VNr~p$&3zAYAE|;kV$^y!gaNp#8exCj-r-}yf#>9iXiROwbtN^aVQr85zLZw~#Sg_3pFCSUY;iJ+GoZRJ-_K9 z>ia+3Da=pC%Lons{n7i6B7!d=xGs_?IQ+^`5iY}#Urq5FR1dB~JIVB_?L~zfyxOc`e<#ytssY&B zUUW-4z2O^?TnZ2Z%|c|GC^@8iaM2-PQAqPOuo0G8jLG%V$oINjqHUsA%oq8*7_#Y_! z3*4EL>8k4ln4^tHcAKv4=zjwJeIy|_k~q2Mh1yb?q=L@FHA?tf!ZfSYr!DR;pZa8v zQJ<)o0aec3k8*y(Jo$uxOsTt`q^J2i1n}1{Iftn5&cm|NP4wPL`W_h&GX0CB?dO&a z*3oDsuo>4Wd8GfI3>$H$JyS}q0IY$w?&dQP~RIYqh(c-+9`?&uI-BRJAMY`$zJoKL25B zk>#-9l|%&n*_?1Vqoq!yF%J-W5f9Mg3TeN~bl3Ty2y*NwIWEV{du@axjXfqdezrhp z`S;hhKrYj}pX<)fQ7ouIeZb#$U#cHKccWEr*Kds0rXn|2#>N^|p+qs<3utCf1v2pN ztvkc(#kMGcUc#@QL~{tSKB!JMFJzkrFFxh@e&}1Lh&Bgv)-4$GCWe1|vb10U2wn#9 zTB)(`L#X@*>WaK@T}Y=>MY%kkc0mFt%Uvx6^-1pDS)9s91|YzVn`HnC6L8&?tY_Xu zB&&MBpDmJZGC)lDqX;T=#~Cgh7l;6*m{q)XoBaQn`^vB?*Ko~m(b7t(q;w-v(hC78 zX^;j5MG+9`hJ_#?NGRPQA>ExKh=71}cXxNqyL9g}`^?#AW`4|%`NMSq-?!FVPuS2bZ1_MJ(ueqFG>Aekwn8%DDqJuAVs2NfeTZ1hfQ5<-Wi*O2315)B( zzATmX9+la~l@9NCJ@ZF41aBV-_yT^mx@mwdG@&vc!Di-24tG`qjb zjJO89JwrceqA}@jvsAz>0b)b|Mt_x5#{(<*%zSj|8rjC)M*o!2;*JzeC;|qnIH%uiL}s@Fah-jvi1i(wD@=@Pk> zC8qvjb>GgB!(bw_Tky(*iuzl8c18AO*-!y#oU=|&c@s+Lt2E)C59+ncM^*?9V}hSI zWlS(aJG#(<=bTl%PY;KMZp&%gZ9_IKC3r(;KKI!n|Al#p?Jh&3&l2 z8oZ*rh!X8~vGTrX4%2G!`d`eK2?ky*%7|t>c(YTqz8Ayk3l~eLJ^L4T4E2ZY_aUfA zbzEkIuz;fAhe8XHjs)bxb>G#1`j(tA`z=ivP40!u{%%JCp|=v^4b(LL{%&u9q3}XH z=yLPavXQext0&-T^o;$dZ#am%SG2spKBgzau(n)pHafpN4x*3YXD5(?W*0n&p_3t- z>LUVA2>SRwaLPmrPL8lx-pCAFnu2?tw5l-`YZ*DwQhH45pRTqD^b{{_^`JU>upLTi z(7~Zl!GTZ%;YSeRmdwYpcRqg2Y&2pnw-~a;75YS-E!|Ql(+Fy->N4$U_yPG(4p5H6$qR0tXJQzxd2Ugpuyk?H-QL@M z7>(v!S8wMPg#c(3!(uRo0^QpsrS3z8njJb1%U|Fi9(9)W3dw6B^cn;ZvvM)c%%Bn{ z;Z@ZUdDML`scY~}aN*&1q4hnXHdQ>R*o0M?i;SngOX-@CdjwI1?tK^vU==V;mxvMn z!k{@4Ii{aD_crQv&ZLkOKU*-_Ke-ZWgwc3juI22v@DyY)ZPt9`kI}el9e}|hc8YoV3l`3Y}^?e9>ZeX~{a=^i^RK=gaN3M4}#yt5?Q<vsHpU`n8@sPr9H>A36$WBCGYj;n?Z#O=j)&ftrUj1?m&6$~EF}be-G|W+)JaeLoVPW8uNqHl6WHr(1u1wq5DmY^ql}<5l+bG< z?429&%OdgQ7%pQf27^`*B05Vy44QxUB0)ym5}164;Yg+NR{=3jcig4%;K$^WwVNo2 zW>k3ZR;_fNfc{K)aLS0QT9JFLs@#r?WDt3=HTvVj&LK)$Ylv{fHBAC#po5%76@~E9 z_i@=I&pp;@sRi@pXipCk$_BO7=tX=Nr*8<`(|zB)MPUgkXB2StbVJU<#DP>TKUV-- z;jrZNc^(-lKO~#wQ&rF?G!wyKHwN`7IGpGx?Gk78$jMM znL!s^<4NV|`7kP%G1JSg# z%R!;f<}r~1b|*la9uHB-yIHgBtUJzg@3407vvBX%xW`uO9BTsF@!(3`20Q-S&{OQ4 zAd2;=0sXtBc<}MS(TNs$=X-cckh!sc2EkvYJf;hN z1ha%}P8>ZR1YVvKRPSZrERzpi{t|>0UnNq1w&iL_xV&s9-=F7dP>8{Gy`NVvjt^g? zc0K>{8Qk;K*5(QkLZS2F-$(u5Tin5c=ygu8pidvpAxQ3_nAG(^dKAJ)C69ObXO4Vi z0XoOU9^b4>sym#2g>#7nSZeVV5C^6H94;PNhUUG!kBS)5%M-r9es}~LCP%pr5{Vb# zKsN}W8G_t3{k?fjC$K)*5F*@edSNE}0g-|FO?7M5KKF|R2NMkjg4wK_0?^5~MfH`K zim7zL8uxey;YDpGUvMPW@S@aD6G*zQHL0DjioTtcWrA~h?1q#k7r?dBF_+&yDEa(t zOkh%FC%ML{NsYoY3nDZPiIURnol4JH#n~-#ydhhT6a4} z>k(yM@?N|wh*w-0GO`cGn#Im-hsg~mh>3VN!>st2)}2t(NcDn7{Y(CBLDRs3K0d76 zUGcnPGB}yp@UO#E%Tpe-Ds+MYu7naDN@$4KPVOFb`tz`8znQ9LCD63Z&k|~yf=v&( zRFO&lR-cQpl_(u*?;@j%?9n615rtwd4Vgw?TwG04jR~QrYme4r`FG^)!A*8XIt%O> z1Xi)KLXe>Oq?g^{S4_bhV@_xn)#4)3Lx+oIM;epP%8TE^1TtH@gez7dsmH$BiSLKP zXRz60jF0Pdv0tJRlJ?YJN>nd>WqP@jbCsHi=U#dc8P~%^FcMZiRxNZ?`dCuL9C}u1 zy<~P5MpNsJ0^KsW@dgDAXu}?{ew*mxckDpq7C8TD(>~$CQ)LU@E9x}BAmdb4RXP+x z55E4WiqW_E<4=WoX4sF5fpM4V4jD1FJsqY_{Jb-QTj$Z3sAPehKR8F&rMxegquA6q z#dqto-?37@Yy#yiHKFP1*qvQtHwCt8QAPXee1lK>6nHC4P$sV4kB-vgLig03HJ9-p zV*F65dh8M?FEA;E)O2*Su8afsVYE4*R{!3+ZC5qoyC^i9KaLLZRMgcYV~bwpwL&6i!2BWK0G%a zIFy(9xnj81&96SjWyWm;gXXHl0$jJ0R6v9(?Dx8Q=Zmx|5JMn{qnI>-0k?$Mr_?a0 zDBK>CFUOYpLNu4q{4db|SLpK~>_^m~0E{kzkjyMHAdi9K-C zcjQ!zzZ;x?Hp#UtgG22=>oTVKqIc5PAy}kW4huxf5SrE#h7?9x{Bn{|j%P5$@MDp9 zQ7H7y>Bue~WUSCOKLP_##QWSS;MSO9LB<)X8ub>agw{;Qcj8{JHxkw>#HYiM9|NUb zLRhHPQ$~jlEpareWjf^>)vzDGRFg6W$@Aa5HQQ$^d_{@a4vTDP+wY^ws*Okm1D1Yx z^SuO8UG1K)nKd0-+jUAa_4Ep8{bCBa61rHrn$UUCu`5`3a zNdU&`Jv>*pKK5n;WtJc!ic~kVuaV_NNV}=WQ2jA#4YrWDW%VA@kt^Cy&a-W-)8*T9 z9={BhyqrYd8uo^nS4R4ag_A1~73;WcAVmGSc&D!38)Tm_JReY>g|5s*Di8RTvweM&lOy_GHuYb6=6^|IM7GBJOk=A_nwVG z&n!7*#zf1%P++;vUtEsV2;ro!f4c@wq2YZg8dZgmqGu6jhdFJh+%`?{mAx$&zKCZYp`E zMAw8pnp0(~`q05ci{vW5q}6zk8vj11+7jh*c4~G>g0sAnd9~`Z^N~RLb6mkOtK#Z* z{nyPi#|z)r=a=pa$3Mqj2vpDK&b@3pR$H>`%oEQ{8b6bjc5|Gt7Cs%}AVbeU9^$lE zqQk*OTs(9ULcf;EAF;{R0_=J}P$0R-*OB(mBe_!%X#{Z~!m4cGYw7@*SX*|0L8%2X z9Mt77tiT~g0`V285K)gVDk)MjDWq<48p+dvW=r?d-R6xxqY@e}-NMZ(>n1=Hiaa+0 z?ovW0j^tkOo69lx)c~XS%^i@{-0=JS2MTN?j8=m3H!gn(>~*x_t`kQ)oi;1TTqh35 z{NC*M&3@mpV5gE=LcHOZ)D+tX>qny)G>#$%#0HgO%EB4D`!?K?Wi}{2D~ay5W;&*n zkj<&|6i2~EG2WUCWhqmF`)+1OdGK-5yZ!H=SN)GB^$_6zCBaSR1dDfi%+t(Z`Cp%Y z{H3HeuGP|i%frNzjI3bTvj!8} zcSM4==E<;o|b%lKm62Mx6{+M)!R{9gwpst%rImdONdHB+2xj^ z?)hKB!Tm47G3!Le1fO@YA%kdEbw?a-0d(Q8#q-ye*m5fH**yADw;-Awl+g1JG2uzo z5!OZ4M&t~)ZAkrv8C4$-<8^v=;}u*-L&t?arRX;@iqAd5*=EkK(3nqu;30T1My^0X z(^x;DCy>%2O1|6`vMFnH+|hx*?RJ3>{p|0M#{U_B$@Yv}IUBFg5&D`hQ_X2nXgpmG z&4k=KRRpcX%f{HNcWjdwt}ps;_}{-YHg}`-*&oa8I7=PtMcp5<>yj752CVXvnS$j; zcZbhedKM45>y86TGHSOEt$ry9Tg){F!9pdkOzghj;PwCt8lZa zV{FcLVCeCg&QXI2E(Pt53)Cy=IfU~ob&N&@2*wfU+oFb+EKzf`mTq1?&b7lZ1BETo%9Tz5m#lY{eXv>D(GG>9;AK>6Qzs!ep+tMLI8+ z{SuC(4#(y`?-zxHQ>oybqQF2jDP%ao#8g=qdmnbs_66&s#Mv19c!*_VyOBh@SoiIe zxhm{0XM^NloQ)C)q^Wy0P#`HI9zC(!c!;!9mn^d$qJ@*r=nUQ(=C>GryD1C{8{ST5 z5Knu-&lv*Nk_H$;Ba!h-mH<#%@zqT*tb+SVF|{lcwR`v}YpUZIQc%;Nj}4C_=hVHX zSz{M;(mnGtG}+gyk2RvXOKK0lk6u4)fx##1cYJLIA;gDpHFaori)5?s4!F&r!oZ$! zL-fUqRvJ_qlh*RyQUb+{wm660r7y);(PepJ;PeT%q4hTMc@~Ue|vAOY0 zs=>HOR(SKQB>;QpdvV2z{~TxP)mh6y=}AU{mnm1(rp*2ru)b8MD+8r%Y43x_Fsa>r zBlDcPohdFB7_L&M#1F`-XL{9NPKwdVGuB$mCF6u7yyn=d#-Y?NmswJPZm7}8LYOwTdGki5(>bzmB zs|I0HP(S;Z`r&c?`FQW+m5%&3J}uR!D>==cCZ2QUb-j1KPtjA)?T5J@Bxz_@_sfwF zi99+UPmHF1x-PvC6?M(gIe=AUIFB0L=~hU|I&p#-zZemE^Wg+ncXPe0#aPSX2S3Z4 zyneaBS2gY5Ni8Tsn+Ysm->_{ljQ^y6xSrlS{z<;!>lo|gcYjMV>Z#b)Bg7p228t$CCol38NAsvu@-9m9OF>8xS4*;ar4Nh|9pHYZ+?4P4|> zaN+0J+jw!MmnfO}!a~_($>^>;_KVHx`GJ6jip~baJ)ZJ{!cNM&HS2SiZ|xr63Udic za?)lOjR_KQ1>eQVfIG0Fo)2br=ha8$VlrD zyA(&WeNbgb=_{vMm%wEihK6WY)o+eRNirR0r|qU0<>kG8-^;%|WZ>Q$kLA5+h4Jot zhNzmhCVaVnUquz8<3NYmFZcYtx!SBgz34=Z;gQ=4j?!t2k=Vm0uS>?dw+*yRHl1S@ zo|axEYfM#%8mLa#%jlb%*l!#@h~#AEjT(&=wqlE0GJoZ<@Q~u@xXO9%cXwQaaz6%B@Y-5ur4+S87vrk!l5893!{!1IG^K{cc{}b-op7l+n6YAZRuh z>xb<)432cl`Yji#Fhx}{9Jyl|hdD+`cz~?c#3MP^8Lg#@fReI}fcBeX||%E7urfvuEa*B8qO5 zUNw|O>Ghp*{H>aDpYqAA>!kPD^8L`3bj<3!+}-LP3gFAxZVjeYZtVBET-Wnl)fLpo zcy~abN#RiwkDK9L$;gl&$gL;+*vP=>bf2jG_U-{&>xKi5+t2_-r{9ve$cLs*$NLVI zq6U@|&dm8`MZBD>rptwH*IwCAT}~9A?8c66-%b!758xA|7EtEWmGZ-Z=4&MhQuhdi zD``1M7Hpg>+sz!SYdXxGC7$oBoFmAt9lcyYp=%o@;B=X*`_u?J2IFHio~xY!r^ZS2{-wA3=}`@~g`Zl492r=!bwDuxj_R)}y7x%N{;8HS3})Vs0y5dD&S z(W@&dz)|k9pGJld@s%AZeZeA!q3R7f&NdA!_ujPsFg2m_U7=eR!JYJ#c1I`0q*?bm z^E4DdaeuXdo%^DC=$ERe3#hhFwM8GSKB()$IIFLR>Au+*>22*42LV{=(YV2KI9E8o zEeOkm0Q3{8Om$^1w2r9SpSrS#He9BoR=k887RFl-{a#!>%+%keJl(TukTDrc6<$2L zsPT|Ix>zLG?~CI~Egv)$a=yeXJ?QUT+1(3v?7f(C^;pt3X@PwoDmZ~%tj=V{6H$)2 zz1%D2k9%GFanI?@@p8#fXtuG6*S_7fbUtWdzoo!nt}!C)vc@jp+ZHMm^I5$sdyzCG zIfuYFCsGdUzAE+)Qjqw)5n-?(EltV>Zdk)A8fi{1R5d$F8KO%ZaGH~|pBbyn)L3OQ$g@lPt>%PkC^Q^Y3rh}!+}|F zY9dMHk3!Z{O-;C0qoqd363I2GTDYT)o}xo-Dx6xSwx_a1(u8D7(p;=33slNEZ<$)Y zXm-Zv5nV?V$`ZK9`O+iw@kKb7Vk*>E8ydbw|ufVZ7Mu9z&7c+At;VB=*gFSRhSD0>6* zGanMnjB)%~wVw`R<|HvUYU3eQ1J@n7(yeg=vz8jR_ZJRFmSlZh)QO}q%;YX-EAdv7 zN}g_;R!TR8yM|+5*YAGVjiZ{Xw@k4eojdVsSUT^TZJu4c^f)UqUzSwoXLv~1vQ`@` z^pc?Z_@_x$y7Qwaw~^pmwqT=~W!Ep2#%aPp>yLaA_Ey@+#KWgtS_BadkdD%-wjX}X z#xRIhOLNfbewYr3pF=r8v^Dxk2lVklfo^C-kB8FMRoARjK+mKE6Z+`KwG?b~*Hc=K4`s^4UJSh*8NwR)!PBMAUy zTH|d5H-v2Ugtowcauux7`OJs<4x$ogMHsvCn@<~DU%z>2&_6Yrh}XP{FbT=`yKosi z>Rl}pEwx^H*gtv$SIkLU4vnVvBT)!>K$y~@Re4Pm-v?vwPIB{0a$6?;+)5PlG@q|%W^ya|KPJ2R{aG#4?8KW8jA7#LTf zMdCFeC7^mnmT14IkS*N!?R$84*(`Q9TYZs{mnIhz+;?eEUmXhl*b8$1<m%@xQ0N-`Keg!$>)tZehmoAcI+ym zghkxaz`V`C`lV&EQhGQZ`a ztW3tUANNRn<74|6yHGGk9MtSG|D-Slc?4dU8J-PcyKJ^-z5HI9RXWDWbo4>hL`75 zzAwzBX2V-HOW9 z7X#C_Ilp?9nj-aENL?}o-l0mTL4`*`#_OW2^e+r!k1RktH-^v2QqQ1ggBGmirIE@W z+Y}IVizQI*)->3L8uu>?!)-{@@hPGPxoHH*Nl6kHfwP#yx&~UN(*9?S^@#%NbsQYZ zy6fB#P^)+YYO|_;XG?^7wTQD3#t?k1ih|4ewZ3N#zk!UK7~wIcFpL#mQ3vz~Ux3Jc0Yu&Rx_9VkV#2K;DCV5dCiG0eKSl!E(IHtI$ls}qqExWgEpOgx93JCxwSR98KALVfl2`{NMNQ{hwn`gizp3(K27e|%mmmnT(146EI6 zuwY9@gHJkJkx;(b7qn~BF-rbMFrH9v-`BnD>3Jqoy;no_D>p$Q@Zd;f8_mGsTSDn^ z8}(SQ3GK$f8UUF?r)PbMXx`@r`-e;aQHi82q{;fahBM6~Q$eqFn>R4{ktqDY< zA6+9n6sZ4-0T5d$!}eKw*l!au+k66w_XM~L4PGtDkQ$8ujnh2#dIXo_IwVzjje*$` zkOG>I99l}bCn|JDWY+x4zDgY>IIwn(3|^9GdwT3U+G*Fnb5LGbNqN-JnL0O&0u^zx z;OeTuuOZkCi$93D_onarU0rZ0u13STxK7C27t=bHXKM0UjGPZL8!p3w#rJOi<^Jfh zOLJA3Lhwa;0b8Hw9ay&0D&wPO;BI`uY$!|qowlIYsrqMP^)LMEbLri|1(8_R;8qC! zwyfpae{2>^w(p`LnLCh*I^uveBw1z$0}H}}WYq>SEz12s!r|3JYxKye?*ycSGdV6R zE5_g7H-Zf4^trfI&2WQli7C-kDSL2(of3lGdH?As&y>7+maJ#@;V8QhL^C+xBN2zq z3=3^IpW{2->MLOX7Uap{8HF!=h~i=~W6$ecBB$hr%o^MMWQpqIA($K`3`xm>LNl1C zQZzUPSR3A;M|RRuSO7Ax-i-o{KxJnijhsKu*r$k+e~~D#mA750Ac(uK)0YdRn^6cs zXB+KARD?#P+d!E8>}*|0Wp&W$`1O$FC|)aG=s^|5^CVB--Zj_u1J1qgYOks;PHpZy zTL`hVnO=}XV_jF>^HT4k8qlbLrPo-TmTiZZ4_viT$>6)kJO$LO zwxW3#6-pKJ*9;|6x()vedBcYNGlL1Hl-+)c_rePcV95`vfu(+_VA_d_+$5E!0Mlf! zN3sEUu_2byQkB=;7i_zU-ZBs&E&huZqT9y8v|S?*JlB5cE*g3%@h=n_)<|oVXY<^x zuOPx#mg(!W4XUq~bTo#a^{Hiwh^#!jGTnYh8DbK&`Ky*Le(HG;AC&|(%L!0trTi~m zGHa#j*H7zk6y411)%_Y2^|!7j|E;S>$N#C@fP<0W_-U=p0A!KOpN}#89&b!GM8o6g zusC`CjSlpmS&3(ysn?C=3CD?^8_i$)nF#K5n0inyjMUtPSwT^Z##bDMI1x$w3F8pG zfIin76e(?)8-w$oAUJ+!#eFTy3&uWW*R);!K!QoAD4X%ahz5`;JK$O@8M;ZcjH4c& z-sIzZ9x*;xOc%jcn2iG0X1ZMLZLfjB;H;bR`0AUV?lr=oYhi)gIrp;m;!1(e&N&A^ z{*&(j?#CJqZfGm^0}b5IiR;C^z=xsY78K7?QCh z^9%|YVaMAL=F*VJf@n%ig}2Ce2!I2s3x%q*80y zw{+c4`Hk(069L5?Q75ZwzC;Jd7+B^eFgR%VPv{gutb#(L8K9TyjSdQ7m$Myn9;yPD zAXSBgKj!bvAo>@>sWkPLt?-|RN46I75ufaMB6E76MF(!p@~f^4oG5JsoQd#n;79>? zNTRn?#PuW$Mwn>ok@MpV5e>L)3v)~T(27eoY~cVy_SFIFtD0R}<%XZ`AlpPvg>Yk- zdL+(ex{|#Qxig5KP8erx!|=B;WN#i!3&^8GaNL0f=-C3Lcv^k0f)95fHiWnt&<6W~>Bx~goZj?v01(|!+aw$)?hBuu-m8V(Q00?WY%^3#9f6dBwqknl68(Yk>N?zzHP@!Yd@798c-*240#kvV<#3EPY zP)}JtolRRm*&F6oB!&IhrZs&Xx5E3TePqEO$wlPxGY$MG!2~}Zk8LmzJd6($Awq@J zSOQlS(UFEa@uC~2Tj)UTytz;PsS@Juml4Oomd|e&?Bk*gtb>XA-?pH`1M>1nwl&?< zqgs>?^Yd5fmWS*P?msbZue9FJWUF7HH?TNr_INe%j|1g0e5>t zQj>B`(gw^BWE>rI0C?>QL3%ep8LBkcO*Y)xfe(M3x#tZ3qOeS1Kwk+}8%(45*PE8R zA=Ald5$ORZ)Af5Ve-ed+C(Pl6USD{1ffxE0-K$gwi9_(F-p02u@``X?L2u7>YoPGP z8{+sP2+an+>4%!o$=aZr-9KB?sj<2M*UtA;hJiMmHa75VSAyq59 z^L!409+iO*m-XzqUVg|ri8tT|0(Y~Bn#5r=LicsUq`F8STVZ9<`S&=XyP1a24-M8{ z^%29^Cq-Y}Ps%)d>Xf;FC-H^l(TFMpHLJAh0zUS8w`nx6Su@`zA$ZdY=2V*&{EtwH zpds_jNYzH2>JI`1eN7}IhIZ%|GHQr<&F=<7(BmNdhh8vjV6&HF#k#K^g>Q0gB%6kM zyZ?qGh(X|3R+26#S*8Ec=H%^o5d+YOpWo$5L!Wf&KipFwB{Ju-*~1UPMZ7_%tpN*p zN_9f&QWc#dsV-Q}#`7fW;dS?_8oy2VX%C3dJfJC*1E~`tay6k(an&RsH~^G@Z*G_n zH!=R?tA~GC!s2_l&+@qnSrI1d1|6zP00R;JRRiE!4UQW6EyT;D)vAH zLEarOlZUD&C=gKTta_W)ftA{TiIb|IXXKUc5-Vv>L9Xda@@_&GjmAxh7z05(I>sX4 zT7WG#q3aLPUwk(YceiCJB6>L@LuGflfhlA^1-(DTW{>=_&=QU+F{m1wFHi7Gt5=Y% zr+@Zs(aFBFKzH+2;XZK`yTFW6%7)7U}uZ-0ApE^`F`nj>jX(BASrab)L}Q-{op zijnf!VRqXBTlB{%>F==PEFQkQ#e)|SI7B|wJqUVnVBD`nVVkt+mreN-FKFIwf(YxG z<=oxFFOTAs#Giv)jjCLk0Xo#9O7hy01?1th)R5%LAAD%Q+hJxk0xA)WCaYfTRn4(^ z;)r1q+{ba{C(! z-e)FjHt!Vq?FYZr);B#&SWwqL2QB)W3dXY;pr+nq6>iC-j*9zj7p@sm85sd;ozL+h zB;;`P3Jl8lOD!pM%frzdlfi*1H>Im~d;Lezh-Gr1~wuZ_Zcoj`79okRxF}(o#f%F?%%sF&JI}<0L0?wF36+*w97#Ulibz+bU>c| zu84C<{$^3oOq{KT<4C)Sni1z4^v4IgL=b%pFs|R#rp!T~9M(0E-C8w_9*kMrb7>kq zP!paqxPFaNZ=5c_G25_a3E#QD>8d}kJ?@Ef)sAbRZ$i@>{ssI3OK__+DfNy!rTFt^ z8%Epi_E%3w?Na%2-eX|K$EgC-o^F#KMgSOB+STH5RvA;IC3bo)2r=^+V&Ie6ta2Nx zWkHbt)AxnwaP4i9num`d|6hXP!f`q!2^ixSRl;nCHC@*T!@NGEG(WC|0llcrB8&G- z>W`o{{fqSj&N~L!?_vPI_~#oRj-w)Fm6%aErM`rd5egmgk@>YTVEg)-6~f7U)qdB@ zs=o{dSIf~-eTXpatcalEAe%|ReR^>*@r6B2FqF7|v0@-~fvMwbj%4pGfVee)NKJy*i(Z)S6~vSM#m{Ab0B(>V+?5U=X1sB@B-HE^ve#>Hqzd&R_Hn zL$bl>*#hkWiECXnYgo)fgSOegtxCt%Sdl)zF+lS*S_X3c^zZ(ghAI@90OTrAnbYWU zlpQceah^;F)OQ6ML^G*d#FkbZc=h;FbsWna6@j#%OV>Z{pSqT7)$JZvqCwX;>995#^s9hg$W(7yHHb_#V zM@mvtT(!)gd?VoQSAOVL$+k@Yev>VUs;QOT{Ne|Z2b-8YZewNRCspS^-;*mO-RExK$ z{7=$#wVaxV90ApR-K27TYp$%9@ne<%B^>o19c6Cl+z+UD(A-DIKPhCJq~Aif?1btg zo(+0#WJeYYzlK6`GnXAfCOkmv65fam0xrBYiqG@6$M`=| zRw&%*hZg5M(O2#W35uo-;K2|t+t6FNS%DH_F24cYnv?@PL*`<1D~JYgSRZh|VkY_n zEsSGKO3ThD9( zZCA^TkL%pJ>OO=x9>PVEL6aT&NTHdh&kS9>0yZ}2Bpe>4u5a^c8$$GF{aY*(Q(KiU z2of`G1ed1D3mQ>CPsAyhj)Igqi}YTfcXK0F&24iO5;i68yKo!Ll=n(X1ib@I*RDqj zFxBl?L4Q%0?2`BK$J&rHK zqw@ViSK9LIXChA{w_zY<2_g9yFZ*1Y<+F2Xcu^#f&Luv;_8tkgp{2_+Nm`;RQbRLEZ8A&xgj zUz{{<%`G{D_UlGMFgP&ZDr2A=O-Jlz+S4RdINC2=0+3m?n=ts%d-9HPltt4{$rH_e zJ&)kktJ~;e0P^~PF)i>4NQf_q;XqyF_wq6|^Nt@T;u5o{2q^>JjbTjS2NtP+y4@P^ zhZgo6_Ai7cU}pe(8lo|+9@z#6a9cG>#~KS%bWsZ5KEU;5dg zr&hj&YvVU_r<0}zbh51w_n~LU6F07x4&p#PE8@;I>taDKu;F$?Cib(~6)Fg}U)#{L zld-M7wmqw4&jP2Zo_TSCk-&QEL9#C_ao5-xgdiWvh>qH`a;tA~&L`=+TbnSd{6=go z9VEr`|K_-Wi$ETI{sP?hW*oShVrRHcakQ^#XGX>h=EsrE+5J;0ra%~+iggV>kt1Kz zO#o`vG_Q6r{2M+M6Va@1jGimis0BoHEG2P}&%)sgl+nrDrO^T))8Rj)x#M5du;4iU zT;nYazHc7J0U1|Q<8`~HIyd;dAh%&+vn@Jne7 z?B%STa`;7%vayB~VL`~g_=8FUF%8&~LIv~z2^VJBD-du}(OC_-sl1+fjg;3Y(72z)lC}Bc91zMn}f5j!&r~0$C#9S-u2yt=@n!7G|BW&8sx(6j0N&hr$zgniJaC1nKA#1Bn%mMfss^FNQF=QsBL zjz9^|pk~h$yLtIro8K?Kl!K1EyQR)EA#9U(?s0G#3h??{eepLbv5Ea&CM?{2GCskz z?gI2--dh8Sw7oJ=)j(F*rra8ttp^c$rl&E%b#?s{P~-|W^PO-&jl)xJg@XgNqOzdz zOo`!#h9d&20Tq_DR;^elG+BxE_&!gKp6*6U<>lc|6BjhHmY1t#7jPB2tLn(y=o<$4 zv-g&|rc=YVN~}zp76dIjQNjdo`PZt4@Sh90T)YM;JDm`|_dMrtFJCd(?%xDFCQoNN z%W=UT7CiB~E!EQlI^{n1sRs5!yDy;h@-`v)ErFszQP?aA_s(sO!x}Eg`2~9V)kTJF zS~TA%s3=soYt2{A{Merj=np`fsCAgC%`yDZwOzpDq!WL3z<8@jiv1BWGX0XF1~R4p z$#&F2X&@oeVp>1mpBLZhVIk3N1@2NBCf=LW33Y$*?u9khs9?UX$9eu2&K7%oXBc5b zAN9`$7U;U;4>Da{=8C0D`L-eepX*V-;i|{TlR=Zlg``-nA7mZR;a{K$1h#^eqo^Hh5wW17--AQONfEKqN@4q9ucF@Q;uD64yJyQ* zrwrACjw}WlN2>7ag@BDCYRW7GO`eiN#*XNW@*AQ zFepE=QQ>&GaX|7oFEu5TO!K@s_;v+_i}sV+k&u{MJj^v0_0{z8AA^mzFjx-{1ts2J7*RYO z!$v*$9{H(IJrMg#xaZ{K_jBBn{0z<_nt>;(o%abY=C(BSYl34PM&GLuF>3IzrZg?i zy*#RA5AT7x*+mZD?|u8yv|FOLampO5SuDIM)siC7-f+U0{yjK7W5R))ub`95NNL^E z0$0L4o!jTkWN%D^Q|r{$JcsA|4-2uF-Z(2Nc|+^X%>fVR&N9t0K_t1bia%F`^l=`0 z0lEMCC$D+ptdy#vt|V40%TqEE#8Sf_a*HfVWc~zUAN*9q{4~UOj}%T@d`Y9KFJc-5vA2H^O*l$Uk3Vjg|a%5Jvn>JR)hMBUKP%c z8jtXM>X{hdhjKi42y*MpMm;d6_Oo;8P9mha9~jr&Xf=ALX^<{-{~SF+`skG5C~VS3 zfwlHvQ1;DStMG=rOOq69u7RZSO%bZuY9hV9XU?{}aUIJ`4W}gT^K{fHIGmNq54tTY zCL&EcV;9a9?L`M&zWRRk)l5!-VKD`J9#3ucrUm!XOst{(pmZGP&PKSMbQn2YK4vF1 z+aL?EzZ7-2ME830{@wi7hm$={9iYrg} zV7{1xlzQ-2g~#Du;-ND*D!F$o1y{xMn(6TA^u;R{GoF?xnF0o@;H2e(pPByK^Bs|# zvh#okIKw_D2f2u0#*=}gN#RSs-Ht0oMe2)atFw(E@qrQtS#n|oiVB1chcSoZq7Nq6 zGLqC(vo7{qbj7|h$N4Zloto)?5#nwU{|zC#IiQtr_2O#6ZCawMp)ZWTJW^%kT%RJY z2wl3IMK%5mQ`(1v_9))9d@gNcpC_KTko)$TuK1bY?bD9H&-_NkQ^Wd>>sk$qm0@O! z_(uJq?>@$y-m%PUwx%a&*zh4Ln@goEL?>`}yvoJxYi=yD2*}psCel&p(30~~?vArF6>PPwVXu{F)G6UG^_?|ad==4Y> zvQurlxx01lBc@%Zdx95Qp>>c7nkEjDEWf0dtV4BPrT*DU#gAfPfzBT@{9r;9HN1n2 zT+jcuygPvTQzMI-gI^8p3RIOuOs?!sF6eZuJQxqlgY$=_1|OQ9K2h{6rVAJzNI*d{ zCG@Qj3rx$OPXx+YJHzkVm{%f$7p>xZSRP=%N zfYVn>VnULaFQF!%`!n%YeaF@&EA4yA$w#2HLOIFqmiydKla+1MC5%YoOJqWmRf7*` z{Vd;AtS}G`zqL_8qL10>ZYF?f*gJe;)Y%VGgz6XH@yVgIqP>RLEZ{w7oCZ-k^h0SM z`!&&No(`Ij%PFS~B%%P<=d$eF;5X@Pb|NA;8&tkv8n_%<_xFR=JVjbvPuhwBFc^vc zPVhPSlJNAmk{!T+Ym*W$hJ!Jve!3P+s{%pvD5_7@vB{eWEC zM|_CeAVf0&i$Vexh5W`!s;vTj#kue0y~E|C=?~r#(a7KXswxFOSBjqfr#yhTKgy$F zUI%l#@v-nO`4-+{Jk(Yy4ANcaA3 z1rnt37GOh;^W*i0xZp)@LOjD3TFENJ{{aVEb-p-Y~CK(I9{v|fX(jfTyB1Q&WGZ4$CvfPCHMZZ2_;Rg@lreplZhyNZI zH(1AJIImMtD)?lQTTi9_eO%tQ=E#YK-SFiF3)Mr63pFP`DI|_V!nbOuh@04$R*#Wi zNlW+PCUV9!w`;Zk8gnWViOP8L=CvXiv$`~CyJ`5J~o5%M8sJ}}NV z+opeSEfN~XNc|f4_n7~it^Hre4AC5-d8ZG9&EO8d4aRxjspPM%ZH9xjMeUhx`FqTN zj@*CQ+W&RTpm6i;S2YXdlF1|Sp#R^GqgBmDd2lyJ#v|@h$m);bgV2+q|FDAp_{D2f z>xsKEL7qWPv%Av@+XaKnYV4Tp(tKp&M%^*VM#mC%NwT$h6+(MDa$ksy|_@I~+CVwVD+1M?Ns! zLS~ev&nc61+{|Q*N9HBr)k@|1p?uQCe73?8ew~>x3gu|rmSCe|%7fReH?8t*?%5kg z<-|vQnaTxccC=n)pCL%rzxH%R*%M@7OhQEYeMp?%p`2p7?Zr){xgU=Bfp6n-@7{)? zKVW`yzSG*59%U%6o(b~I=!PkXdK65GH&D@g?%%WNh~)UpmS6dHvvMx@zPGft3L?>E zmBj_Twem@U)9bbh&13Y<>NU>W6clM(9y@_WzJZO&jS*Uga<)rd>A?Py8NkX=}Vg-3-DpCjfKLGm1>DOHS{K3} zJR^lesHFq8y>eM4T%32-9+bvzuU$QKxVV3NoK2h0bviX`&Y zAGwK%RIQG#uC7>Y+t}#)Bu_$$%gf4C6%+#NUjXpn4)O7{H^G@z*cHJj1$J{*h;4e>UUv>@2IIVra#7N5bnqNh5`TQrY#$FVLFR$T|36 zk|yNZKd~JLN6|kvHum>vf-w^&f#L0#1%>{*^uU<^DN4~`?cU41L__^=WbL0%H)n!< zanq%v|K}(C^8w(j{{7iBj9_hyZ`}U+kH0}kZ}#s8{`t!eQj>l;0O$18GSTG!Vb}+m zjk!7{%Z1VOF?`@iO~qyl@1r7+nHtwM~Sfu*hLSoQ=x4t zDMzuW!CABI*)&tYB)CKJBP)O@dA1m=2&P07zjhxpTX zNriqQvCz3qC`GRU6mEIK;~lVPlKQKiNW)mRAHvfOF{Re|_Csg-Sd?!wXb7}niAZCk zM*rv3KKOs(q>7tk61DU00_Wk?%j{@yght*`%%gbx#8tXWX*+i>qWK9j>vk31p;Eb~ zwYsCTA$L2aZJ-W4u9}@Yja5Q6x+I3k`Gq zHCg!({uCMmaOzcv=J;fAr%q14D+Iw_-ui?s?F7DUZ5@5g9y~}%8cqHhFs`XZq%Pxk zz%C@DIJF3zm&T8Kx_3oNem)My|5@(rqv*`xk{7f3%_ilrfFg^S8{O+5XqJ}|tf)X`v_IL2- zo_n|2`$FUg=jXQnt(t)W<-AJ~E4BvLSbF?h9CY(}h@~;+cY|w$o1&4N++C~aIa4mM z5UH6&niDGEW*Re#v+wX>yxeEQJG|{2kK!>tbU%6v*nf`vRi9b6i>ps6f2&K(j~2=L zvt;PB-e1i7Qc`4GQ29PtxH7lv_n3L|mFwBhpTEYVnebNby@+IdR_#Od?1TK*lS;bD zzdzDMQjGhJ!=FXTO_X6u+vWW7E|D#_Z+WYgiRb^O5M|vqK=sGeP{LNJioy1?_<<#2 zTCZ3x!=V>+3HBG7fV?b+9-lDSTIjq3!b?&!>Snz~jq;3t!Jduc)>$R6{J5V@trnDWB zx2O%HlY68Rt}>?Mew|&^kH7CS~ zo4so}aP8-Dy0uls%w}E3 z`P%kCp_@8Z?t}IV^+=BO2PH&OsG{RrgT{_J+eaK{?Tsc(B0S6*VmWwu&#Fc!lpgUv zw|^cWj)6o*=##kdBDp(yR|6x{TxboTpQ-C*WI`(k6vGWEZ?Q)&Nvb$k{HkDT)Eb;-)FmW{o$ zIeoVg@5+K_+xM9oNLzhR&^e~y)cmTv`!aF*X#QUQ(u%BL2d>J85t|)4esj=ZGI6fh zUy`>13P^{^PNR=MN!z1wD-Ep$N zi?s)*c#x7mTu6av$VH!F)MMJKnxm| zOFDy)xDUYH9^7<~l!J5pnnI zV!{0Q?mkV;25Js#EQgRCwj1#_+PwOBD`Zfsh0jzh(`2v$M*+wqbLu>%dJo7hK}L^L zmb~R@AgM2Sy03I#LaSO$t1jw1Zv2L*=9a>uakDHNNgTch1^YS)nNJ3=$T{%TV}xa0 z6&)-)@!oT{mxKPtB9H$$vVZ?Vv_X*&LU-6pha6Y|+u?wAW@6kowWUdF5z*74u8VX- z@#G=?5?g##>dX)|zhiSqa9Johx%>tuq{m}qCPTd4{w!`36z$_!gW-A4U|3Dmv|Z+I zG)q?RhCoC3aAMBxmpBx-W`e}cif zr+l%H?W{L1xe7F1ZGNPX6Jh$9zKQUFXjzQX(DN_UjPb{DF)?#8uG@92RdxI2Z5p2zL^Hq zy#Lx{00dSQADAPfc7+jRQ`^j zH#p`3`SEt#d^0}RmV zNUx>xn#mo^Wv;9e8c!I>0Ynn;ciyg*@i1DoU zI85Ck0*Hg7pK>i$PRpiQ%MQdkM(dKQe0T0Q`)M^gL<&PB^}9|fNGwy#KO>&t`@#He zj%!u3Wt#TQWV(tB7UXADseWioY=JOvyK+?JEGgSi1#gm z{ZdZ;(__p{yt6=&zV?70f|FMq&6GOul)7p~nr^4NY|_f3a>KBymMf$`O_z2UUoGf_ z1t*bQyyFHgf5 zI5-CSmWsUtm0#S-biSABbA;3yrD&oOw0oZ*9_vRk;+swMRCfP;v zv)Z^CV*nlXby%UK^O-*ri2}%kdaQE@9RjPMJD_mVPTBgAoa3^!?la(glm@-?W$;?5 zhOj6>by=#cHvqMj8}q>1uNXZsAirk1uVYJ8vrrh>Y4X!;r%jgI1*W zCC#k)Y+0U*+Qs(c4>Oz)esHZhb#q`yNQnqGpF0^p-gd7E zvb%7v3Z`Y2@P;8?O`>=hlZ^NrffpRTUCK?9YcI!aU$F`}Qv&_D=-`tzxjD$*BlL6!~BN$6%EHPDwqv&GM?6ZUva<62`ciGdzzcBx?G77b%gc}9dx&(z9XK`yo1~9 ze?&oD9J*irH)HVi#z%j=gi=_(N}^1QGEh4etD+669_vbQf+2J<-55-KU*3t--l9nX z7izT-W0{ox&U^l&>Q`WKb?N`;ecU|41|+fZ_JI9BlF{L`tW4MFEx7|W#{xc~z%(jC zd5?681`#K9I7Azw$&TX{oYZd1n(;ei{l(w7tGXjK25_tn)GIk>%99jv1jm(`L&72C zk+t?#S-Wk+V^Rp4FQ;&D)u#Xx#6Zi~#8}s_p@rxzTlJ&Bye}5GLt$6(h6d;6m~!B1Eov&Kt*1 zFL-oeQV;ZT9o&49*m&+k*tt5|zmOTOLA7$RD@FP4G1nB4g|rpVL4SVCud}U$=;Jdz zUOqr7~jJ+}45Z<%9}$ z%+x=qQ(n3;q2kkw^_$g;bf9q!gIn-dEh>~-)X@;(AU#96H=?fb7s&?ggh-epv9iK@(;hYX~}{va2nGMK)!2HEbC2 ziJRCQpmn992;~v}Hx8MGg5A7bW?zwb*RfgOjM3)S^0r)<|xVIJ9)PM=AD7C*u#01zLY0T~eC z$@MG0Wg$YSW$S20YXM)y1(6`n?HIdRHTffcwBV;5XXr^ieS|~)bi>yCqB;hmv^;Jl zB3HNxJuLY43n|xey)umF3kByC)9jU4M63@2N_DD$&3)^kT&%D|@%EiN8KuUY_7;TQ ze~}G?6qvv63wX}1seEW-uTko^a*Y`o5AW0mVrtmVhRO{Pd=_KM6PLk$1Ll$L>-1@> zbWWOngyR?0rC@eu`%ETUQu-ha;kGDVwC|yM+7gmgU*K*6o!8NhuNy1 z3;*1U=LtB}Y1+IrSdJ4%zLz)1QQj|FpnLY@?j=&M)acxR1$e{dR&OE|sUk^w!N3|+&{=LWgP&vm8b`*%W~D08hbZc9?>PU5k;QTcl-W2DY_ zOSZ613D)U%R-Te}D&fupzlkBMn7m?$));{UrE2rFp}!XJEW9nI@akQRzHVHgnCwa_ zIFeJ*c}e6+cUtOzGHk=a7n5r)`GDOIh+4`LKzEcFckq3ZvCrrq{5wTW#pBA0e(THk7Q|^0p#? zQnR!{V`+5#s6=(UStFS1m&ybA2|_`)ghzDKpZUpC7H%;O6|t6?BA(@@lCAnY5V5~ZyD zqCY_wxFjlED2J$s0IaPp@hjP$#6sbbO3|^xfJ-NIME)$-asH#@aW?s)uH&HpFBkZA zu$H7*X%Z1t|E?shG>k<~PT4HCl{tva;ar83)$iAw<&bo2E#;|a%9}>;)iE3ij%{+3 zB}2cznI)`Z@31W=o-Z#~I&?o#FFTB3_|rxFx5dYNLl_$pY?2rD1QIJk0}gH75Y=Pv7^i5HFTx3>b@Sv~F<^86 z5T?EDwW+QQayx9RU_{mDNTMR#fCCWm1I^gv7h%lR0fEih;xGI`pMOKv&(fc|s_3W< zBb<=^#$A){+T_QOBBtj)0?A6FVSqHQi71#AR zz7?3+4!ukd(@9boP{_dFoWw>!T-kP1KW(DJh^hal94r1d>S+9P!~drI5qVfU^$z-BZm6M|%n`>fUzo zKw)dZu94$J^uIFyI{vYw&ECk3ZFQRMx7z*`7Sy_%p3QsnK_AzxzhTV6@$|X%Dc37q z$dAZ^LGa#M-p9|=+i@oKp3`8pbH=lwR?|Cxq+(yMnHQollfZZWM5WxH2r++%N}PI^ z)q6W8fsVLp)Dtp(0F&xJqDgv{+U+fOTFWp6iMjOX8(&2a@*qchuW$?IHazY*T+u?T zBA^KpLO47c<#q+#)ij|Ro4Hxe=)`4|N1d!tr>#+VG66pDy*o#sk+?nxqoO7lA8EiQ zl30(neRF6E1STXH7n5D`-HT3%5Ia_xG1?60+`PN@7=&(# zbjEwO0#r)80&#DHI@m=QI&3Rppjl9V&Xu28lhnEO89z!iG<1Xoksxc^?j&S8CUs8nX%?Z<;5h*IzXnjfae1>6Z0PyL-#V`!Eb z{11*x0T!XOO@Rj@HJKZ%;fZlyc*t4-AxF2Y1&%G)Rh&?~9jbvx%xnq-=&==ZOwY=e z)hrOG7QUc^2@qW5Is89l-?6_U*OqtwJVPtM#CWDV5WH9}1H&5PhjIyg;jKONi zu4Qrfx^+8o=K)8lZabmUvj>7-vwBPW z7WB&~BQoTd9Y&78n-7Tp9H9hYH?B>lHq6h=6H)r(I_%xy1{M~ z15Z^w2Gk-R^T>_T_5#FGtPQCvlMeMDb7>om1zBH6QldzCvake?P8b;J%vfGy~A< zqjZHOz72YGom?6Dw{=a{V0Xt9MI%S8rB5G1drr)2>dN+LFR$o+>5=VJJ=!)R0|BSg zy2Fe;2NSekhazvZKa#{T^TO|DW?i8K9ZG#)S+AM1mS>^`HsPd15!)uZN9V=EWcwt( z&Y9AotgT4&OW?K{jpwY`WQocW^6D|=7?@jP*;_hDGz&ygW8Vj9C|N< zeXqM~OvuA~1r3g$<+~3wlKjW_KTq1UX~*DzzFTgmCzDEs@HOPC+Z%owITzgWtbe2W z8U?XS{)Oma{3Ju_cA<1BWAPP8J&9$!@OEf9W;M`QZ*b(fd<>{bMO;iu|8c3?ppCT| z5H0}S$5AM^_VX^aQJ@S%-R<>OUFbw^yJ(`o+4jbLlDe4)5{eL@EJ_47!!!XA0%?VG zt0{-pCa|l;Efs)z8cD*knkfCvOyj)7Zo)v~iS4BzatpYS?$8a|cT8!=C`fKISIDmZ zi)oA2*JZ90qh&*x(|3!QuV>6-^Km!J9r-FJ3RN1zny>c7iBBwnDEzCm=u;hQk8hXw zUy9l&o6u=b>7b};D~%oB89=~4d`}{k8!0|xe;-Oe*v4<#@BTop^R>ltZ1ohzF^3$wUM#aIKs?4h>}I`qZHsr;qf^_~y}H7Pei9TTCa zwtURFhUPb>Aqb?F$y5p_mIH@RMu+;Q6M~O@=v+E$N~`S7Q{V0e{X>&lUYYvI4zP_0 zBjoV2Z|ITXBFNW%}bS zJyX7rK7Z9QvC4;PVwK97xj7;Q^ZW87wgJ0^a+tdTMVcEC^J!K2a1lbdq(ryiP8hTU zvRZA)zGBSFF0&&dgc;`BlAK@=RkV7{)slz4pZvC~EMdFJ$(p4%5kEcgX4m#O%E4FS z9IJNBTl@XWQiEOw&eVz6=BwjrL8}rxr015uZVz!7pqH}aFEpvW{K)@6nPPR>Ndk<@ z_~ACc&r!h7K#$$pm2csy^n5Be(0uxRA|z%fla_#?K+;5n_!GQEXjIZ<6{^2M3UCM` z79iK8DsN=ukYOOlAKH8yyIo^qDP=4IYc<>Fyp2V&NE1?Z2eNrcX~{kE=SdOcMhpED3q4+4kO;Vo_$e6@EOU$* zZCYABjG3{AY1U>I9BjX;!Yd+@(+>SfPw26C6WQP3IH?*xL9&u!2Z7U|=GwA*3~HQy zxy6{Vb)8CL<(1 zbhr6x+ievI4tbGs4nHseSLR%5*dat7)pjRjG}%kOI<=ndE@rPnLgm|t{9ozQQUG}m z%eEHaGV}_5KnkB|42}n``B4$FdDAr>115QhJaKeE%2#3 zHU&w`c}>$7``^rx8?%9C08+qWVz);eDJgFyu(K*(G0mm{7%BZ7s_wHuQtp^tPMh|D z$6oV8TlDBL4ALF>KRTlnAhTP!X0p>3Ea|prP|0pH)X`6A_;>q;#Nj%uk8kk>-+n96 zr{A9FCWIc0&){H61Hy-z2L)Q6+e+(m#u8o3;^mhgU*-CI6v1Z99+5QKd1B{?e^tMA z&b;!10eWsG;5E8sB?S4&&!a*w2dfMtwxzy*S~XNXM#DPXOzzx(;441}iX|Y?Wv@tW zBB>6 zNFoGZgtG$CPUwtUl4%mHtLl5BYB05^6!qOSUKbZGL&uIJFMt$hGb>m7x+T*!MVB8` z!X755lN;Ahr0LjwCm#cTj(kplz!Son+uve2Tv*av#RG&j!lyIzzhtItlTJGOndLl! zj(VSbui4BE=&QZX3+Saq4Lf)kBA#2lBK1@Y2szou^BHR{R){7Gd-h#-$+1~G>@<#R z-PTV^7wt{(ax*{+6qI1=N`HTo6wzC?l+vjc6cizyMY{``5HxAl|3^UfXE`LXav4Xi4iZoW26CL5a?%R`lV2NHp59^7kNJL!_Ch7vxussxkevrziZ*n7G#l z3hG@=6e{mWY}2l&7e@$MWcLmA$vwfhm!Y@MxDR#u)k26gX&b>Li1cyO)BmnJX}NLA zX53iwEccR83Vpwquocz`9{xnu==ZE^Me5iU8f3tCZvNzeL3*SX1&1CfVQF#yQlhEG zfvfP>JJMANfPT53-6bX0j-ozm{HMoaMGHJ#H$Hr*t6wB;|Q-9N)_a>7`Ro6sU8)l~{9}q+CPT7{12kpPj{6tU77_1A;;O?s?v? zx=)@q6+)CiEp5V%w$>GlikSarFs{K2``TLs+EWcv zIm<&u3kfl=&T|Hv{I20u8K{x5lxps&WmtfZYrs{0;BdN5E+qGF%+0CdDK~`WO!L|J zO37&EoBONKpP0R_=a!WaR@rJJGt#hy`TrN>0s--2-+>FB+ed~@D(|KOj3SlvQL{(N zeYT;VU%gUi=$1e*knXTz2wk99D9e7UI=$vQNzMaRH zE?*>(FG>p0j)0TVBMpeaM5}?BOn&z>W!0Uex*f*2GiuVN!-+i6Q5a%}BX{t(^K#a> z+qrCG16}n_C3_A;d%MTuNGr02b^iiKFrgaBS z6})aX(6xU0A_*eAY)Mao!jt~$TCG|r%|iR8n=quOG?&f;qfnPJ)9`71z{C6pKsU~m z6)HTs2jsVD_gVwTSI`@T#BMUO5OW-$DD3?%8tCdK}eAr>b6jT&*=B)41%<`p9X5KqErE)l<0$#M=!8My{p|x# zMBLQ2r06$6fpb6Kow6li;I4QX8je0gq(K1U%pVJ}+$OG@>l{zOtV>|2-U1VAf%vC= zbWm5=B8adjpvbdBe-F0>9R}W>41qZh;U#5JN`=4lA`FFcUcg$Jv^gGi$vgX7*wM4O z8MX=f+sgmDLS*oUgQd_D%H9C%(i&A5^zJY6xgL)_98tye;MFgi$NW7}FJeTcnXwJjBa|$T-+sarzoTRB^`gDn z{xMcROI`#javBcC>Q&QSI#x3s>x#88eC}^905(yTaJc#TPC|AXRB?8|R6o7%sCz`d zcm9__5)_K~Up;hSATLuHY=fb=qqe@KHu^Q~2YIhQ#gEOe7Z|FWS5qWIBlB>>*@f_jP_fuCOZ$VP?*_#o)?NkX#6t<@PclF zynjx;aYquvL_8Sq^o>iYp^_5QF;kIU%!e}cqjXTZds*oHri+2yN&FKB3YE%i?&5RF zo-DRD`@eaXDq3G~P!L~-9uP*5{zGqD{=b0&g+uoPi6LWXk5fn&w?^* zPOMYd;{=?+fJTzZ6$X0hT@vsu7&}z+SpgN!9WJ$cAwWZ|p^95O8L*9iL{<+dk!@F_ z3{c!z6{XU2aGo{#`wE!UUuQD6Kuf(^P!*W68{A(gSU#Xa37dUxn63lP>i7*=jqhi>}R6f)kmtiAk`Sp9uxNe~$qFxz~rxx?Y3jkl(oWx$JX%IhwQp8>m|3p(C$|QP1W;RyaE`EF$!P zLFWqyhmeii50a~a)tV-}8)C0g6uZ+4Djs{FwIPgk!)4!$Lm{#o-zdnk zggO5t1Sbq)Dg!f zs1pCLlocpA%y|*Zw9T3B-(%tdqDWQ~ed5s;Q{YSuX=OW)ev(UGtA{OwFj_jaH`V|B zqdc^^`GA2{V&pG&*g?{WP2X{YMF)XLHN6O!R4QtE%1^N)Uh%V1%B*hsxZiSq z;kN8_#mecS^2OO}*4MQWaw2?G3Pc#kJg?zzk>pQ3_z=8{QYd`*3(puh28uiup5@^f zJTN4+LhZ=@>4{a1DPe^68y)439~|!O{fZ6yjTE0Z(+pL^wa}{l#-* z^W5qU>U!1aYT{&{;_3seuq}}fIk5@#OEOMW{hSB4J*B-~knX!5l)*7A16`)Yk6Sdf zL=#?l#Iiu2r_3Y-!0g+8^vvsoTH&yvhfz?;x|e`t_k0A>BS=~$dFp@~X{$b&3(CrA zFB8MoMN)W&+8Yv5cMLU83Hj6_dr`%XQW(H*^OXA4;0XQiqgo-~kH?Sb0&9PK#q_&% zgT3@XK0`x#(2Cth^CPcLy^pBHt6Kj{w)*_t3zXK5Uu$nXTEBI?6~*j)98QZC?UcY; zD9oWoEr2V-GReVCYf(mf3|T!ziebg3g0vU@pPjZLirPlvdr#9b{X!sJ`MCL=2|I0$ zgWtJKXnrn%+LEeq_!ArTR1qRpWhTZbViq=!QCgQVib8&s6d=@y5S6~I5nnt$SLc{t z{&-|3>##Xv@ZfF9Td=DblWtjjGb05BmG0A^!KgQ@Co`!D5nHljvrXSHPF@Dpj?O3q z!kEeE7J_&fZhG&1eY%2C(uehD2#(17Y~Tn-Y`}EzzZ%vGz>Q=U=1TXVd294h1k#Mt zW_(U-lmL!6j@=ZHhoc0h_9$APaVRUw&dzR7Fzv!spHLW`=8F$Jp%rp;BQ}k3x%pi4 zf~G$v^T;Z;^K7D7>b*ZyLYRO;Vz<*B0TGhuRQDOXH>}R!%p^;$Zs!iM_AyEpNr`yu zJ$kafmDwoT!P3;_th>Lfj~aCjKFykCgKVGcQ3$`k#7l>4=r`7%TLadf~uq#g{Pmn5xnwfHP1FI zrJY=w6FjLdy^u<|S}U)Q>xqZLc~UZqImP#&@Zg+OL9jd<7+Nz1Q&?e>i?zyUN)N%iE{7_!D0b;3&dGiUE!=`u-$Sx%2l(LeNk`^BcN})vVsMLQ1n=#G%Xy z7a!GQlxLQE*j;M$KTirg-rfokd7ERCw?iGez7VimaKcLfZ~QViJ0~eK+o$TPJfqor zeG>PB_d4jZD0K(VL1OWxx@A>9my`aaLFUlYul@lgPq=5Pp4gA0gwSxmRN; zexQ0YaN63vyuetPme+K9So;E#a&HXi+Y1vX5TN;K%}lKQ!sIG>ZX{Y9o9${*`rs=x zKbwmg_RH6E1(8b)e&aZ6xM{fx z!-m=qKG{<`vIH02=;kYE%;>a|CIo=f#k(_E%)m#}S}|rzDlx+uFVfK!qd#0V7BBA6 zX|A$r(%x+3ws2JXTR?q?2##2w+uxZ*$Fn?S^O1qra$0FUapQNPYbJu zzG$QQUAU#Qsy#bRnV>2*;77*_tKb@__Wt$m)Z}3L0Z&KZ95BKSWs4X4q^g=9tzN3s zMB<>dqCZW4&W{pBgLJ#eyUmbypMN}AYR7-Qn4oR?6v2pl5Qmuw`CYfu{Rp-{X;mS|4v}h%3=U=X?eSR$* z$YL09wFcx9rV1Z?Y_H^v`3fmi%+d$>hCuURfV2ePocgM2eRHr{yQa{vuM1kzB{kX1 zFnc#z*9p3`2?1pSE>mtucDwD37Rkx$#<(3K6zN&9Iyge6^`u`o(Y{|3PFQNamIjXA zF(Nx8@IB5~LyjZ%6QZj8f-Z4#4Fs~CK;+=7=E-C(3XJ+xat%x{4+}A!BjgI78f(l8 ztsN~0Xtvl7J_Z+H+Of4f#qHOf7C${Psa0L8?4GW_`im zg>L^CnlEPM*Kx7+T78p<=@$(7*WpbgkId8*onzxq`9-xF{J|B`xu}fnSWsXb6x{NH zQ-;g1cLpf5JI#+b!$OU8-=P@n^vf4D=uu)_p57ldY<^$#X`#h8}GJ^XAoL(ru+`=~_Z9auC)p1hV=4)1*OwVM!ejoLp@ zNzT81sBe>E#e#+^dBzpl5NLd|;0oa&V=ALFJfrvTCnb0HUwNC@F=BK|Hd^q`$^x{#_k z_l<{{<9SZG>CSJvbd=5FHzzm^#JidX+c0Wi;Yhp(LPwwZ(xS(#9^|m77eYy|nrfo!a zxGNl%QmU3m)>4q-j64%MUic~CklSw4M-%{si;m(s^qTx7vdZKXv?b@c`R>hj?;(n5 zu@Qxx#oSxp5}AKpF+(z@Sr%rI-ylNWGUXyIID$u9k4sCFD@h0Gai;1QRvCw-6ao=` zxS3il%AB9qrAJv>(YcM*cI}ilE?O6~U7Gj(+oQurEXuXRNCQiiQ?=qLIOCb=l_6uv zoLj^S)3U)&H9B?I*v_m`_jw}GHS&wff@MvB@q0atnww`}EgDwGdUDA{ zg57+yfu@MFhu_rr%;s)(pq1(5@cx`R1;S;~VyBn#$y_ys6J4;aEzzyk=~F7?8RDft z&DbR#T%l>5Q1^x$P0CeZ8C32!o}|zE5Zin+`yhRQA@vN!ThQ~YJr`>t#mW3DM0zNv zxVo77?br7yRFw3aYuJ#Gs9;d{p1rK!ka#SxGHcqe!h;5H-s3J zQ#bPX^sPJs;!Jko@)S5MXjpT7k)l&MmM^-t{b`Wn2_=UU#}#{qp9GNxX5RDiJE5^< zix!^LXrpJm5zDbrn117RM&cf80vWPse*R$*mYQ{6JX({gT5GfKS6J!uhCm8<8ERiV zicjykYv|Zpw_Ft_FWWBq9!eZ4pU&#v&gf?oyH;-Zwmyw4N5kspu~y|#XxcE$>=rS4 z5p9=hOo1p((F|g>D^NsMrI_MKgTPgy0C&eY~1wLQ_wMYSvfy*ZuM22h#nMj{e1WtdCCZX7sR} zK@IbE?urpzb+gBX80VU<$0GxC7`{GUU4@I24ibiV*N0psh5@!|&aCO!@u2Q3V(X@n?u;eOJDmGciB-4>Ny$z9siMle+l1nLm zmpjRI_$9O3>djtOi_}`$B)3BHFOfEB3X%mLHF?87;uDFIJ9)W0S9PI5t{t91N%|vPdMG+w%~Hmv0=X1&C(T~xzL4v z#l_Oxl6Bjh_{&tYf%nIAsjSvBsr9_L%iMXqSTeR3g_X*EjEm0>?j`d6c*fK07V5IO zM5mm6BHUbWjuL#eOi*E6O~AxhV|IRPXg1u~>GX3m%UFke)}atFSra$Ro%hM``t2q2 zMnFWcx*J|g4268_X24%HLtMYonm+8)!^s1w^n`^b5lKVv*x8*bjEWRG0z#)jNqmBX zL2B&D%C3I4;_IR6F#!tZ7Gdq?GrUgg`!D8md`%Zs=vDT4Dzu1pYU1h4)a28OTrdYN zoKtJWqeV5Q(BeNI3y-bbn>_O^IXCKNdYr_OK({shVBKepq+gt`;q4S{KXb08GHJF= zuz=6TQ8QbAwoS4+#jQr0CJ#^C=YnIy(86q|%#dE*^UrgVIw#TN=W2bdn<=tQZR2n4 zd=2UPRW_29e1q%Vu#({B0|n?Ce6;%a3v?8X208;n{NmqlcCb?h&O(GXNft$B8)X)5 z%0s#ORB|j-?nAv_Yfs`=V0K!C!BvjF@NEjjP(~|7+>nkRX`2HFRGNoZ-;wcfCcJ|F7vM=UC9mJe? zzK&H19$HV&N?ZKMUF5swPTHo9GhR6uP^tH#o93(}c<_UdVEyEw)w-eD=I4l>n5lIB zx#7w3)h%;A(d=WthMG^Tf>-T0Iorvmsn_;X@d;^L8#V6|br<^nST}6cn3yGP(8Ldt z6=)QikIf_c_OGVK&mIfM^sH7?c35U%-<~FvoJ;E$!MDwe6^u`KHfq!ob*hC%-ov{z z`Mi2g@J2pT>(fm=7vp;5N z;KFX{)ky6ZSF)E%ly>4#RQj1i3ZpbsItp0<-;BMw8mXpmy|ugfsADJ#x)hBhFBk{M z&1g6zYRmDeTZ8b3X01uNr&44;)>`rYSzRDK^rw@{>7nq=FI*M zteu7%JEDk*UnKUs1Xl{xB{e$jOPUA^0v!qsCWckTBcx&q7LW}Z&|;b7F<9rc1+j6B;lESC-VQWTKv4B(<;iAXATiT zq8oxSPd7`#hGO$O+KcnY4yvO%(gSxk+bgC?YMM$Z^7NI+6HG3bIhIelYkQVAkB~<{ zE(J0C4E!uc9gp%XL3}5%%5+D9+?FBy;B_rTZSedRiO4hP|+OBCgRoCl)W2?A)CbT+`CNqV}?B^5abX?@t&jl*GMNS96nRlS3g`Q!Rak70TB< zSv(b-_@WAO>0bA>Gr33CTk`j7)Z5hCrP^P!#7r?x()AR`$w%Et8urG@^k2F?QnJ2jqD>+>L33~MN> z+HC1gysZ+mhIvF-on~R7Jj0FkjETFLhM1O#V=B|k*-Cw4sC(Hq!4i8~2v2)qnWgND zDnEPMa@n7xiu9wngVv9ecCxo)*xwEH*aZI7Wv^Oa%4^YR8+hSED*TYY!kl4cD0b4fge4K>PbKB4(s@MHjgxd@XmQEdTZTI1;7j5^l4~=b)38)*myINjk+8yS_kG_y>@8WB5`c&SxJz=@$lslwWGRM{%#UN*0XREK7Orz!?etsa3k&xG>nVGz)If^ew zQxv$Nnb|FCk@ibwMx(9QDmMh@iFZgzqb2`Y!wX)m-SdKk9=qd&lZP(c>yCT1K6DoR zXG^u$59o`xdx55LveYHj&||VLr@3#IIIExO z9El56b#8}mKhVRS?90-d&RNws&o_D8Usy?*q`6!pd!rSlQZ8h!tys3(c|tN)quD+i zEg9V;Hz#Y)GBT?_sG!!E%FIBViXY+XHH5<-{3wCi{Fd4c)j-C5Nxrfw_DGT^)Ap0H zrkRlg`HD5ERi&u1`{Gj8LPmn=0$WtaFS{|#*OcvKh{}1-xdaag3yyxo>T->FREIe_ z$fZM3_uJxP(EHbS%K4}shhWs_gV+w^)#GJb@9NM0a?+@Lh{24B2iku6KXH`Xbbs$-O%g#Oy{BSgxO)1f0$h0r?`}#$CJN*5k?WTx1 zHw{{J{Y|#6{({Jd^%dQUYb(=I&7xQ`8LDU1EYU`{S1q4TWg4MFsqOGSc<9eV?L7St zHd>ElW@i7CpJapgCU}U=*cJN?q$aC)ddU#A4%16;EfI=L!5{cM4~guO76j@-1$YiX z*b+Q^n#vpeNoMl|)kIw}aTo6VvzkM5(eF~ov#>9ay8JsIfrRsL9ZSyk@79Sw59E4} z3cp%hN3TlRS*oYQRS(pVt(PjN@2zYS`RHsf$as9$PE2YqWT}c>PJUN5sDU(-NwzTX z%=*ea!to*>_G>RScTpA`zT5t=C|tP7Ny%Pd3-1}(=2{qi&i?*vTLGV_(^=)lMWpWB z``1EP;DH9OrhGa5fPg2KEh{ZA-2@Zg0*4 zxZXhD7=ClpsUpsMsJ|{9q9$|sCqdejLPK)*<)R+n^7buq*Lih(;nT$+NDH_184@m? zoWT)^+A`XPG)Nf&+S*57HG-iyN05+2JAS&K^z7RYKPQyu(yn&ud<_Egsax}k*p`$zh`sl9 ztygYWc2=}5$Gbf1ci6m1`iiyPsCjGx*~SE5zQ}*q$#O=_Y=0Y02(Yc!6sMA zV{L_pOQ@-E4uNdm@%(-tado2M>`v*=v+13`^ipG1v9sVk-is8FO3_p~;z1fLmRt0b z(wonaAr7?PCQG|u!;`049VN=C2vEePPgWAf^+MRRIR4pB%pSenFUvTkLYf&hq=Nh_ ze<`Rws2ZAzx~w%!>KdsC#^7 z7-bNU0aQ{LT1n}Kp+O0ek`gHqY3UvWX=y}2KtfWwTLDSwZs`W;hVSL`zVG_2-+wL_ z4A0!>-gEZZd!KVzmnRwi9QdCM=}N5QQ%~Qneg_Y{_))xi5}dqiQdIQeGpOX)P1!yyC;<#OV#?6IAll<~CC z;wNP?5w)&Ut&cbXfPY|HZ~!@@Bza%t-GG)0W=cJ)IWsY% zWTticM=U`?deU@c>hmMN#aSi#&rh9l?fDTA-+4s~?m%h9$9nd*rz(6-nnKNA-6@`R zW}|xyP2=9~sGPJqXCFr!)1tqasEYP2h@h*K51orij5w63@-}^%sCSka@s37C-26s! zo=Sef%dF_4*}L^*nr^kJHhHqSa({SVzEl*gXm)3O|8Y-9-63S$Wl?6Re>Uq7jZB;^alus0OsMj!uD8n7$1}}37&l`&)L6HFKDL2N zAyIWXywziOJk<%--Zz#4(l4Mrs?GmNE(RjVO)LL9tG4=c7IxsvuAx466#5{qCJ!5d zh$#N2R-^JqMyQZR0-d*^M+B3mJd(f+1t3Fp^DNKUdbQqV=Ww}U5SNQyrTw1EI|Xl_ zkC%M>+35=*k z7oh`qFzFeUiaXGG;@gk!L7V(o-KRTK9{&haL9jYf0_vN{49#2k39!sh%w`+v3|Dhx zt*xcEmq4sKC>tZcP!h@`oYNS*nw8@I|<4dB$PW}jeQM4oy^`10>7EpN@-Cs^yn{(f6Gk^-Pvuv6e=aZ$ejW@rX_}2mwI$a zss7~R_x0wc8^X8gNVXVEY#OBT5N?S`V2-Ilu*Mc)D;w}`4!r8@w&SUH4 z0oy3ayV%7D93(}J9msXNPh!9Tj{NFgRUER2~r#*s^a_bZ*kStGr zwgs>wQU4%@qN8iJ+&IWdAN5eBM4y)#77qYX?OXK+9=LtmX^KX>VXGZ`H!^H{Vs3&7 z{#l7bk6^x}zx&?$?;-YSv5&`cif*e-Z`Y61Q0PAy;ZG#_eIcsN`R{e5DG$PYx^+}; z4;Kk9T(N9OHfeTX`Edj(o^^TZyif@Z0V1{#Rt->})8}lDHv{3C;<}2iuKJx^@Xr^r zuOmg!4(@M;{}v>QCn{kA1?5&all&pT2fh^Em^~d8?q1jWGQD<$}u~M(cX-Q7N$>I|t8equvQ@UMn&OVGKefZ>oO-~LX-@K)w z9Y96P7WWD2phl(3bH{IJATWBGJsDcG%R+0xR&U*Wna(O9FCM-PrBbSu3Bt12l(H$8%%;T$-mPZdff&=e)QCNHsidvfdK#t&*M)64Z2mU^b(GHU+FC^RlGl7g@d@ ztuFll$pQDKUEXo!&Y?Px4EXtu0VYjK6oLlY@V_t1)?$!^nU9>Gw)z0&933M*j;6K! z!EMP1E+gq07In(O_4)2zra6>yK>PQ1k&;AgILJ! zwD^RG)o?MxQH1$HZ6{3;km|;I$kxSF_0{sEF;#!GwFyxkEZRQ^YfhQ0>yCPb)z6hv z0Xe_48rse0o6w$EjvZLz^FQWRY^&FJe&4)YsTJz7UDkwik~>Y?s9_a4I^ zENJk-q`%@QO6R@Pn)4I`qabLvt%Q8!RB@0E7o1O4zO`G>Z>!-T9j}Q<6q?o95y;sj zW}vX%Z20e=`Jqj$+aP6xQ`s+JCoKL}tdwA-gEs9FPWqqG8Q*Uk!;|>`B$F2v55p2= zF#kUA8y+hg>)BNk^ASWmJf|A|w`xn4J?|l-6AphqDsKRliPWv2Nj*SR-pKv$7p%~Nw0P%c+GT&Yk6X18}#;qqzw{~U0|WH6u|W(HHKC3;!lny=sp z@w$ek`&ly0vH^`8P@|gcnETKs8rW~)N9<<>1*u=#Oho|Ex1CwhG1$%1J3cUZ^y;1N z9z9xCh*52_ub`$N$MEg2R~7?Ww#F^T>RWG><=DTdQ9MB&jSz49N~VA}cU5|4d$ zfBakLR#@pbeo9?A>);BuFz?!zXVg)^IluvmQM>cIyNO*Q3jzvG%9?$4%j!m2|obcPPSw3uiKX&U+gCZ@jD}1v05A+|IF|~q1khEQ+|uEH>%9- z-wwQMMgo&w3F2A7RvKVRp@`@kdr!5uNruQR8sU)Suka-l(T_v%gC8&uD8UK3>bx)_}Gu%S`+~Cs{ zeK@>jR*z(a;vxMxwq%HiD%-a})&9=h>hV9Kb9fVF%QWOZMTv+gy5$qs!^n;Kk>p#@ zv@ixx40KQ=a}V`N?PU%Q@w@&h`SsEa9kB$Ch>RJOURkCZ_}3!^QnO@uFz_qjO&W;+MHOB5xn>If z5nFyCIDOl|N+7p&x{CLYdWBmxYY;YKl!YQc_$lUzD;q6NyG8VuUj5^Q%+fZXcbA7t z`$7aipEM<`;k~Q%NbCIV&|_Tf=Y=KBWHISFJVYI-5*iB}5!Dk*N|=nAHbNu}|iB_y~}vPH)b8l$2?{co?eL801kfjX$~P z{Kc-CjUm+U1IYb(Eo{on3wL2AdILuL_d2oQ0D|DpRQdYtWDYy1g|!WXI)Sr6_*+>2 zuJ5kogs4R%XUiwcn79>YL%gDT?dJ@z7AK73A%u|APYIiXui!VxJOY1vrCUyVX5XIy zfwg}U|I)KuV4$SG6S$L}V#aLQu%JfkzU%pO@90D5&{cRz#Xp8|B6h2tH)#XRsREaE zyLVh&FgzjP>8Lwinx5X4R~13G_zuweeawq9n7S1Ra5z_zr(RKe2*i-!u~(t89OF6g zy126*O1KP8{oI$#V9~GVwc+9vb66pdg}kS!RB|KkWp?MHuEr0^86R_4&IUitpdAKBk7z-*FWZN~>R-r-0>Y z!vhrz^jCVTbUXI8EQh0&%=A{Cvm3E?z^Of;v{r7_-64oD&H>~> zh;u_<;v3*)+k94XU2~gZ_`G z!E!ZT*$`j<4e0FmolG7XdbGoB>hens8g!LG#n`kRT>izwj$i;3{)Nb64vwxPC%o+p zGc+rF%fIl?uSE;O`Wk0yVheoqIm6rxIBNRc~$~wR)}cW?F2D zg-@bdf2~R7b~uXj+ZztGf@Hw>=9DOT`?E_n$ka5F!=ARFn)M`TUBst5=owx$e`cer zrJfW_QCR_uaOJ-Z-%?O#f5xvA@~tLcqTL!F8qu6)crYwq$j#gp*Rfc%{8e+5;}DNQ z?#FYE%(Zo5znY0x+SFE_u`AWAlCNWLe3=elRVDXw49H>9?6^QglVcg+#kz?>svrgt z`YXHs`g+#F*6%Y?VNMwE&Qu|)eR)cE}9s0KWvg*naJ|Pd_1k{3anJhzhbQ*(e_@~Uj`YO_Yd@Pj=5Bx!5=WjDw z%tE2Cz_^qF4}8SU0i!P<03-&9Z}n5Ylg&e`5@OFXLUQH@6$cG)#N-`5D%au%?}5{& zh#o*WW5#X8_|FhRx2%d$4Qf-FzNN^nV?njx_f}^)%tnCRu{=j1!4|C}kZgZWc7veq znSx5Urh48xq&d!tW{41F)Lg)Itigyj!JC6}RkT-Al3QXw*)8Z~_o^D%8?!$zXz+i| zvggk=M1e{tuC-YFc4o^k>&KAr?Njp~&m{_ez!=)P{o$WepNqkVx4V3GpUl+YuP}{R z;>RAs^2rPMD1_Zr**M=6IDQwwCs z2Z=JImM{xd+BqIWAV+cW?6@jL+x3r-FEtp@QDHWdr?SJbfU+3kTrFv^qneyip4JUK z_S6Us0g8teKb3?^?K@g;O$3|)-Qd{lJ=n0nGB8&t6d^P*S^CbNrjv~VuzGbq5OZ|~ z7tEJ{xR*uxc!rtHP7mOS$}bA+lc^e`+*))pBhg{qPqyuKvo@(vAaE>ST^y`R*y)mT zPC|b%u7EuRdd_3+nkir`MfTF#YYnSvD`gc&y2-%Iu}UXLwhPR*tnOE{hzCS@n(|)Es3m z@L0g4BiJiW={j~~7}0NL>;;u(s)W`b0G_Pqm$nxQogjxfaZ&g<0M!D{@~vbZs~4io zizN<1k3&0UXwXpyqCHsj3a($o8lX*UrVn#zp-~5t4TqQQXa18_Znn51-n|riC`~OUeq@5`Szf z!a?&Y=LINSC5g{qaE+6#)fU~d?`=iSDh29>%D90Cl719~2m#9An(T3cBvWh1v6BT@ zu(aq;Jzw%BXKOoo6>30kE109U+AnZ><)E)Ne3=oP+Wqr~MO=riw3kJVF z-Vp1p)^=z2g^&&MXw~z5vP$$?KT6yqLtjlVRxb*D)?235^5qO6^Ao;454e^eEv)m6!8K}7na*foG6YWM59$kvHVGwf)%0TNHe~=z=t*2m#x1jUs zClyi^kMdT5;jP7TwmOIALN1AOKPyXmI+B{`(`3dPo-A{J%c-Yz@hQN6Dz7$sdi zDZhA=iWd?ZzT?hZUV;+2Sryb^1N)vy>!sGPJ{)A{IlBkP+1XvtnS;Q(C;ru8?jZi_ zDEH4m41M=|NE&8H-~aLV?GbovY@{1k!ib*OIn!xgqMsCDI2L4wKgi-H%do5(_bQ}? z5^dR>pVLaI4sbk%a-H*c5xc@aKu%>X-->95Rk&(ploOKYTHCr^DcYBA6@JO3RVk+S1o^M^9HCZZ7+1^4Cd*q-XGkg`9kS7(f)riFjr zy!`X3gE5>nS;~W5;ultn3~@xJHUiFsmX@oqoK|MJKEGSD9Kb)=s?^)ZLZBnPmeMWLfY^%gsDef}UK%qq7sC~RKI%+}2{ z(!w%oEw~N|Hq+v{-BvG|*uHyv?QiU_8#5jP6Sl90X!h@iD8L{2wc(4PFHEw8i>jx< zW%Bc3r64WTs78G%O>+{2t4?9fd=<;_Q5VzeTFmS6*LAiZSvq=8MTLT?2$rG07JtCO zW28|`QR*oOpn3>3iq5a)Yt4!wkf^yj^Zywo`ZHk(O6&HO2}%@D@}#v!&*WdE#lUWU z7*>kVQsN5xzJ%U5P_uMjc`@G@s~x+?y#96YERDho3YSHLT z;uDd;j3JwLx}{M9(7hY8sDEr@2KD78FsO!!Y`%6o-!072dbmfVvp*(Ovy9C@IDLHO zV|{+Lk~qFIV|4DC&g0BL5F8e~JU7-04tO;2;hj9F(T zys0fA1ibLfbS;MQ=#=cW1cue|uHZt$i`J~N?nb+60A9LXOwL8EJ+kRZ5fQiOMLv@8 z&rX)JpAF^010SnDdvWRbODDtphyqp6s-eZ&DT~2ViB}S}(9}`TrjDOjR-ZOyJY^l< z>wxf`;ClCP_iZz-OTOk-sX1E9mH8FPb=Ju>{uWaLnfptMvHW;O&z|6DeT z3)4ydWwSFk$cfiH|qgl)`Q^A6q31)DVJGmD;$VDTtZ6vsla%BdkM8rh4zxU7ph$q2Q;$s{&-M9CY5*Ad7Eab| zJtVf7F?p}529-sa{jLZLnkF}R`1&J1=%!f6bz90y53TH)8?4luJ>ctwkoYENmy*E) zE!E#Hf%0h=V2RCcBC#i{BRmEKKxI0Ol#32!K_K@xqhtOaB=s&H(BL488#zCIdMb&j znqpT0ePnI=ZKWHbJJd9AP4fJK6-QpZ_4mFIb0F*J4RH3!fffw>$_)MQ*f9E6TKdP| zngTc0e}5Zc-m7GW&gT}+>&=y{IK?Jq3wK|byz`F7K_)7nwX?EYu>kQxWMJLkGaO+s zVYRbk&-hs1flkT0^sdj+fLG*gcp!m}JT80+iFk?$WR{bY3z~(@*|Z+yShGFWW~KnP z`kafm+hLyJ1sh3}(FP)x8FVy2*W{!7T1RHgZx4!?dDTyCnav*_*F}%P?@wq3LK+mNl@83 ze&D0GZv`)JUrR`k3c7 z0T5(fg;_~qwaPN&*S6bW5K%hQYA5ote+(5hZQQy~l@0q_blBGI$kN5Eh!(tWQhyUP zhyHAP=40fjj%G?Bb|8UQ4c}yFx5D8lb_$3VCuM{8aVNc==MR?arBu`qp~Ou6pIYpL z22hi1C+U@4?eqSY?r@&3g|1gg2SfEk)mB)$-#`8`-?y-j5h3Uxkg>0IhN_LEmkoRp|)AKj$%j05REUAQre_Zlnl@cEGtGIwE}_c1im4gB<~=Y3OK% z_j@tE;BY4=neaPZvQPs8WdDm{m+!)hz-(k>yaEuASQYfoFxr3t=4VR3Xv|Gp`}Pqc z!Y)SfHZKKXUh}wLUdM@k3lN>~LWN)%-ZMt&*eZ_}-rOj7aV*e8Y{0=rg47&Jy<_!e zwqeRN!BXCsn=gw@xBwsU$yB+6_qlazKrdmbcd5vcl_bUOirEDR-MiE*mISGiuRGkS ztMS(bkcT+Fo*IC~jAyZcwPcdmHO3_Y@u_PhE{W3pm)xeS$@_4QTR|ZNHKJhzoNXDG zOB*YLjb5ufIu({=`7euUKgmasAmB0}KEB@yw@&T#Skn>OjK%JorL3cNbaLv;y}lI9 zKil#>7~!uEV?SA~_2p}b|9DD-dT*(GQ+W@pTay98eHSe@mRtGCp;eKLX_5k^@Z_-m zS8T@JI1z*o@72$uyxktBTE$9N<8c02BvCH5{8avP-N}W!Mq&ZUtFnm>QsweCm?|WS zH8C=*V~DSeMGKZ;Rg|(kb0M)1Q5Gr8ZY;>I1n6b+-GvK49vrC~`8Jnf7gmxRMEU)^ z)32pV)=iIY5w@?>X}vn;uG!CId3t?Py-JEeiYuw(J5}HZ1$|U5om01QUUmCMzOx4c zQ1CmjuKJ)iXq7>a0cNtNc05e=(P7*+&)ky!1G+B`VrXpUK)1YI?EFYi9AFFiae0^) zNW_~s;h%m0V#J?VcUI4_HRdi{UI*Sxh!SIig2_To(a#V2Zb7*+71%A3lvjd5f9ESv z6grp~7UI}83VFPtJC1|oY}IS#+ZXf0iLSyWu-hnmmi>)qMK$G+iJc9B6prF^ZyqXV zNq?fzeFTX-Zb6|p-*V4W)<0XF7 z5?!`9O`T4yfBIPGWd2m9ttH2^03O(h>Ei!pqN!!}CDNwuMC8NvJM=xPQnHUZWcZQEwzV`A3|N+4uP9yRb>Gyj?J%#`=K&bV_mLyaO8N zo=gTsq&nE{He~Po*clPKYQu)`wu|7iFiPcgr zri=|U`3jj6SOfUTvs)Mfcw5HmAC8%q1y4Kkl8J8E6~>vPasSQr1|j7v*D1wK_ZHHT z@D1?MjAgl9Q!jW3B9L=9R+q}4cTr5d>PJYOf2Lqo)ekKcdY-|$Hp65eS+o|tu>+1x zzADVj05-yC;P>#dne$Ue|HSqINmyg_I@If5N@FHP<0aYpTbsi2g)4CpS)1#h zS*r!t7k88rC$7ia)7sIBf95#oZo6Wm`wyO&)xTkL`3j}CuicsFVu{z$=(w| zldDELGEbDwItIn^93|xsankNcc?2@dy2+fS5uy~%!L^2f2C2LLYi~{fmp|cLptDfM zg-NS~CeA=2S8k7%V!{=pq7KsTrtlY=oX0+H0Y`v;4TR-poE!{>;D+{KX*e}L>#Woo zpuuMUR{usZzkDIcQKjG5`;7acV+&3H>>K42&9h^4E-2qU=N}{-_2G-TEhLQ`qYZ2F zTfE{xSi-kLdeEeY!izQVIdJ`aP-gOI4*Sf?kt{!5H+AEi%Re zH$!ZIQUeM-g#`S8Kk*AFl=|lEUE3W#b^A-;T{a?aFH4~B((`!4K}PvGaLW8%eS~LC zsiJXLJNo{z7&fo9?^e<0jHHXz#}u{IjhP%V*oe547R1~H2Vevx?^lu2>n}y|Oaq*g z23ntUySIgsWtIUJ$d=`qtvC;*nB3xe_(h?WKDr>f;zv+$=~Cq-Re&5IkG<5LkG8s! ziir2ch>?3$F*aD@jg=v1BL!iH^H|U*hX>4Z4FZ7AhnzfnFF{*y3~~iQ36Jdmc>$nZZP|YK_x0T!9Rc4Xbq5}p=-&mGpL{LuXlhTgF1vM-2DL7jb z6)-35LLKtXH(+j)XhTFnxbtfpKb}-z!(F9Bm4}lf0gss9lDWEKvWpKuRUXV~e!><9 zIM`i?orV_@<(83)#$@}eq}ZchfgufUcVP5XfS))610j~(oBl$I1OC{K{_rm?>NS0& zrN89hn&NB)C)uF`rA;(wfllkO+DKTA&ulKr2K?HNLyjLd0+~YSQtmQ@aCg&Zim8z+4Z4AN*Zd^Z=L0vwA;04_ z8K8NR7~8iKfb*Vp8CUh>9$@ddc!7ab=Rh~<-A+&QL)Hw$9mv^qD?&AYyo?0H8Htfa zD3FfHC@ItSuP+nJ_Ez%Nb1(B;?N@QHorKt2`s+FoEub>K+f|vnbR9Q6p%?%!p4)eY zPY-A3eNOsri^iA)SsRa+-1Xzi)ab{eH^}*7QA*YdN+%k$-imB=h9x{;>$pm{36z13 zV%__M4rGa-A2%59)gF^O>OOFS&1M-M+wHanSZz+4n0KWtJNwLmc@9IZeadQldz#ol z`7EAuG$@r`+$6*J{Vl8*W`$73atBrRiS28LU5s_nI6IwK0 z{5ojl325St{8;h0e9f6;!Ax87_4pHD(UZ!4*$9qTT)+m+Y>ah=F;_YM*1(-H)4PF# zc)F8|$C4hrp_8rQF<_WQEN@;IB;M{?>Bf6H-`CJ|c<$33M@U9~*n?khS4;e^O6X1F|eks3(B zMsXilptPH8O>|O>M!#nTJcfa9s#2?l>0`b%pQY9?mLHAF`WKFVAfjde#s!gp{Qs9% z7O4{c{V>;{_&rks*byPelNTxy9ca7?VY5-R-rQ#!d;YEbjp%WY%&pi%ssS!pf# ztBm-I*p8OATPf$7>aBa>4Q)BB)WB{B*+Zef3ZWiyNh&+pwPpcu)iMnu+yd^U(xZ0% zks*rI2BEe!PiwD^y-0!(F*iBF+@&EQ;j#YNZBZkW#mB`_r(!NgUoo|99=&VX%+DX*Wn2cyw z4N-K|HsP%V%6I-!Pwy%x62MFd9TCh2NdsgMoaq(y}0JS_)4@DC3WNbaW}&;!#5$6tIc{x9m;uwfa5uG#^f zHp;makF=_Tfx_-VNTITm-t}&R_Thmx_6c!i^DWS60jYC)*$LDQH@%>fH{^-`Zp-i4 z4Luc_0We{d@ zxnpc?29gD*c-p=`P4Zr{n^lCFIPWz5r8$w@CegD4lX8O9>%xNN`hLe#!R6ibR3$BL zNXn;E^{Tjzj+lSZP* z6gr&emYg9I=jU$+KJ${5%NtmN9Wg%k=!`xfTONxU!0^?z{nk(6|Kr&Xm3KNtV_GQG z_3;1JyeQ!bRtMId+Ye`5#VrVspL6mqN@L2cC~r`z-z*t)cK3cjLeMu$1{i(*s3cMT z4`%3qSW)%zWgMI&b=ET=IW`D8aDvg1)l~EvMEPh;IFmrHDj300^&l7Ah#*r#YGh$C zFdL$X`Eo`dUJkHV+NJqH`!cl2F?;9u^y@8;1I9(KU*$6bn@*eV_dYo}VKceuO+JXT zUTI=zN!`_-@iBUsY(F{Pe{QDjQF7B-z>1WO&kqDD+u{O=fr5&Smw$uPn%uL1rAE)I zcjQ!501iejCKUf;Tzd-Ep&FD^QEw$1T=lHmYAZmnBg-kxOFH%?C_L`s zd_MkOw3uMk6VC&G5ZCUi&tdH~QtaH7RwWe!88j|ud zlOqgLeR(uVQL~pYTE}>%J6oYYVcm1F+fm+VBR#>>lZjqQzcCV?sW_u2O zw=vjJN@`UQc4O zRY&Pq)Q}ZvhZ|Si;vw>3WLSU)+J52G`txOtDW1ijKW7YH0jdl{7YHC`JYv*%| z*5%OpOy!J+;o=e5g?e|rfq&}72;bN0?K$lbqQgN=KCi;Nu!aQ|gpC%ms0{H@Ol z$n5N?M<1I!G7*aJeMnG9PoqN7BieXs$3%{U+~Y?dpE5Un@0EE zGVi4fB1f4{c(sf>nrTnR%P1|Vt;lO}l#_{IRq0&~*}H14O!TdA#_cIqux%f|6eqb= zX?5D(7UMMP^(<%>+o`y=!>JzWm}mOL-?#L^R(~vKV$5CP@`o2T(fH5)_8!SZ$_^0^ z%$$7BBFG>}as})r>pd*fOvxK2Z!-6M^&s3ca=UKrPQnZ~gGTdS52YN2)u5p+Rggr_ zR^p)YN?&Rs(`nlF#nuiT_fcv^{zjTN!B<<}pjoHut!kd#xRg&B;9H{TVO9vZeJmd4f7iu62Gr!j*$Xo} zeSW{L{L=)Im*PADzBBXy(WxZ}kc{(lCB5VNG_s|h zY-{^F&gFvjPwlXCded;H-lx2yrh=KSVwpYGSw}f;;x6stYAf}ljGuMeL%CWTxS~cS z1Uasg+FVC7oXF3*wQ?4MTA$%mh}qVj*z0eU#FXdf>m9GofRPc{6$dBvyo7%Rr7Fd7 zg8Y?9unD~6${POhS7ds#>csu_(%ckW^t5f~GgTewYmn<}$0g|X{L}F=*sEj353vA- zc32Vc5TQaZS6dzrT`ksY%3IoV{*up*Il=hoF9Y28*pP0(~Y zcE{1{&zw7}rqpC94IGs$8R{?W-%kDY(3LEj=*Kn=fP z-2kk(1-Ai3l##j(@u^c<>Fa@-VUODDqpvmgyX~Q;Llusm`dqw9?KRb`hkD7w)qF#B ztY56yhTcw){E38e_e;^3J)K~ zwk`e5`>ZKPH%9P(YOyZXID^s@+hJfB+lSMyxJ zwYIPJh(84RQqP&lQ}H}oPXo9dV!uDD;n~6VySp2+R7JhEnpTktC6WK|9p{tEfPYTG zf{c0G1hv6w*T%Q6T2&Zv?|*h_i5!Y|615uM7$qzxF%&A(a)N5`^`K0#c&rrF?rcTF zrit-tNZN;)Kb#!K13=gtav%L(E?&%;x$vtM_qhl_zmaTCJMSj->Oec@K>SFmbN#zM43buBMQXEy#oeVf zhp`(8W5@Ee=V1l>22(DOB)bvUe-Jxj-WN;%rN~f~SIU(a%T&huA**CuA|jG>baV%6 z9IvFLq?#Rm$;~KjZEX#W@X=`E5i^EfUM()m?m(_;A5*;sK9Mea?YHlT5<4}2V;=(_ zE>BUf;ZTEpv>hP?IzS2YyRRaqN8*Y#{6nI|qDNu~Oe9R2+_2%SE@L_nG3KtRD#I}+ z2R|BBujxmHE5^2rOHjK^smSf^{85E3;}$F)_1ZoC-GBAqaDcDX@`=J7N!8IjV70&} z)^0V&LF(!kG*-d@P?Cuq7{{|uJ*%<0uIvY88-a!%P1j>#=z!&O{dW8~9)+_=erQz2 zCp%ZY5f>zCO%)p&MI{vjfvevnQ&YcVcQA76vjN|>WT)rJkT%m`;;g_?Yrq;7=({to zt&Asex>9^~H(&Wi3Q&pWFL1(kQ0WA|$akP{CYOn54O}QmJtPzof0N`FxSNx%G1ysh zhpqDYm$UV>VJwpkn;^}l{fJkkoK{YksSc2(GDeu`kiqOJGe<`&A&Py5x?u|dg3Irv zY3m7v1@sCjB;aAKOuMjP^hqsx|9t@+D6D1LmlLPKeDB^Np@R!1Ba(R!=3{sB{Ii$4 z`3H4^+-o)@)OrECHyn(O$8na!4EC&qel(LN>>4Y0Uh|AtgWGnP85mwgkiJPTs@PF(Hi2^ zx(%am`S?Hs4EvLO>$uwq0pE-f45UlBoz)$F=bkb0+{M|$s)B^QgW;3=r-jE#OQ2T# z@McV;c9~jMYAYJo4o5)_GqxFW;U47*$m5rylIFiNgW}KEDwq=8(X%AmE_;oC^8&7QB;h zdC#(t{PwfDaHhKN5}1=u5hA85qa~YaOq_pAXLH|=fR9X?`tQK3>8LhLc}SE2*>piT zCru7)xh}BCZg{FNDsM&W zjwccoOO)ko*3vB?Xsk-W^AEE7z$S+~qaSoUFA<6&A}mdZH;W_QP@09{J;jC%OMkO8 zX74=$4iuC~3k4j7zG#(BF4?!xJ_6#0Uo$COUWoO-aP;596&Tjs)U;MFVDug2#AhYr zB>Yrpv#*X+|HnI0;eh}Jqe1#X2(3;p>B0wxwmS}*Jd;VXU4OGNf?>hOJrzIsCP~%w z6z*l2%6xLghh+!|MaeyjvUHQKJ&_H+$kw6Sl6lyH1PhMGKdSfAUO!S&2=yEvKJX){ z8;$Bc(ga#>5%&eE_@pHHdOt>=+kv|PsIqhPFc|&A&wP`(aobUh`YfGs6yRzBEflS5@`HaNmJm+}P$h_nkr%<5 zVlOMBfJMxN#p*}(_9<8Vu9C;kPF19*ap?uxDB zrW1B!2S4p_53GZeyu81GUQt!m?`(umGM_VpBUy=8UJYI zdNu%FM%(k4Z`@%Ic*!NIUInmpe4MgXATE$udXxhixzj@Fz*{FJersBN^Zh-RpUtLP zcpu;j9g4OM;x6~3g@qjn@r1c{vt*Z+rt2ZdbZ}uAL`IfD${2__4rh8aoBz-MRY1rO zYnWTz1|>?#u={dfPZ%}BrfQD;x7R%JcEwJ%ZU3?P@e%5D*RV2>4pR*M)tDrIqJC} zd|=Ze0VCD7ca->A#^q1n)9~k(G~Q*XzERr6cbaI6?`!7~@l&H`9gjvEt*69qX;(7>&z93UgqeFl5 z2XD$U78)>Pxhu1V{`MBJsPM>d)jfI3it#_U=LXdy0-vP(&@0!F9QWp=3X>C2=uKk} z=1u$j|2`6c030f>oX_rxhPaIs0Q(t1iu2u3&bzP{3LTTThBrAf&+8nOwA<0O)>u&g z_mpS9a9e8IDI@wPW;Rm827{Th$atdUqh9kY` zitwgBkd@e?es>bU=)a19E!_+Tpo@C}5}2(Lh#_>@9R3#PqXg44AM|~k z2mzwe2NqTLB&FzlAjn6oFw@Cri{r0|p+tLB7!1=p)3xt(=Nf zpX@ZyjjUnL@yG>ZQmB#*MU)A_T#4?`6!nzWgDfnMXZi$I0O;=2MbEGuwq;F8G7xgj zeIdJTy=|GVb<-^y&npYu1ko6EmCRMueL{I9%*E`2%D{@IM>zZ07#ApYKT>&mVCh%P zpF4E4&B}?Y)uvMwxLS&O&TWW)>rJ}8&aSn1zwiF=+bvgO)XV=z*jGSB*@f%Q3`2>u z2$DkxND4^TNFya6C8dBOA}t_2NSAa-N_Tf7ih$BBDIp!wAa(cX|DSu#x%b?=7HhfG zkMG;@#_o5}J`YM$V1(k~ezT=Hs-UZ=c=(1xHRrolMFrWna-|Ia* zEJUJLnt(3ed#Qfn59*$Z92(uo=dD60f`G>7ZUbkryI+21VvKca=d!rah=2$&8hyug z#2v0dia5T!RCirjBOfaDI_OxP-=7mNi&Opm!+cdx@{;6mo1b%i{%ZR8Zp!(52(Ar^ z$qNG>BD0UJq^JL*Qm;ER9D&?J-g2xWfoU1jAyHLP0-2>q2u>X$Vx_5nhtJBm%-6s1 zxvUE5j=k?}fA+=18FkrK=k;(4)dKDZUo@8N0K@n zYvx6K`uBYCZ-?rkuMchPO|Tfave<+XzHRjS+c+n$wD(>ZtYYv9Jp4bG3*!A85pmqa z?dA=vrvK+cb(S<}PKhBdj0q)lAC-k+w{f3kICNB}PvszR1t~PrAQCeBMgvXjeLx!q{1^7uyv$glyx;UD{!SKr-jLl-8Y){-)^%Bm_@ErW*Cv2KTw4K!u-o zLE*1(;EYHK&o81DkNa=9ZU(Vfbnpuf0@@#qE#d?Dt2*x%&n>S7e4=(Lgn-}Yoq6;) zd`p|lK?wMtkxbEN#+D(CfvQ4a#V9ag&sosrJ#bsji@mGifd{ahECBF&zB$cu+TFHQ zT+}rGKKy&)#-35;*LTGw7YJkltJXpOcl0<6MBd7S-v7E)+#z3Clpy=XK4E5RwV(z_ z9e%o*`r#f}3#9Z-1d$Jf;MPMz1O$#kTGE591u9T|z+O1}7P2c1go@5cBL5F2l5mU@ z=fsI{znvfm`If&ap3VAoKH7lh^GM$9x~=i6*J2u5XEm05z=m36yTQuq>_H#x0&Y;AXSG#V|2y;PyKr z9AD(De;Kk@jtA%!kfjJB@1_-i9&s`KUOD1CiUditJh9>vAi%N%$#ZB}5p9SUqQeWO z`wSqhzaIhEH9Z*|oqj!hBz2!&|KN#UtT+;3f*4rGS+c^hbZi>*`ZM;*zhfVI6{M4S z$wq?EdnXGp^jh;Dbl!OLW~muKOJCt|g_bv&HDgG$9tgACMy84^E8RO@CS)!m`;J0M z0uOr5BTayK$P7nD#4A32@kcxn;xI-ULv$fY3!;+*i4ubOnU&*I!Js5Ve1Ndo3FGVk zYw)1DSuB$5C#S!!p?pmg{lj}O->_=Nl$m=L-x8zfgO*`X^aRkdhx~8|+~<%hZ+}K7 zz%ssK8$J+l!*%D^*Ytu0LuTXc3$fS1y1Yk0y2))u#wh=&7pMsMt6r>>&?r$z9uaz} zA@IL1MDV~wU^3@hr;_5g?dt7rNmEAgSs<<*0y_{$X9gzwYflm1{u6d_c@-#l`n^K) z07UEeuo-fx5lDL&tY6LhiH?kboKh$R=F-H}x}SWJ}eh>_K|C zS7IEez8t%DkpdwWfEC_oY){mc1@Ef4Q2Ss(I1^E(ZH58+FT(|YSqgwq;W_t;`#vvf z2^Og>4QB&BmhMt3-(u?0CbPt`@TG{^y3YId;{qnxF8!aN1aH`#2yr=~%?a1;Dqj!J z5tn}tN~dTOkhvb)pwG{Vhf%f`FFQ@ba z*U^}zWmFR(34f@Wien~=x_;D?*|$aY)(Mjqaeuz27}P0TK192F4i(@(Ee52G5J0Q) z2tX(3TLG9K6#5_H^3SVzWj+9i;6HPJ5K|t(4rA)eWVpk0u}_c>F4a0ab^BDKZG4Q7BS0$*R441k%Qp(U^dSmFSuamt}y&F*oitZiqMbd&N$ zf)nDOBglWA2iS}oIAFqD%^Po`M$TOX#rUMEi~pR z*PG9V5QnkVL|>ZBw;rs!95AnNfpn99LEK$Jn6G2Y&Ol|}afuR0>Q!Hc9dvnv0{V|8 z-&HsDNv}JAYlPAR6%yHDv3TCq+udOYmzCU^l2#KG(9>nX7JrG;(w&UHcTSvTV1 zh8GuU;}=f9pk69-_2;JLpu9P%Fg1hszpqy!3V?NH)NH#}To}5n-(Vls9Rk_qk<&4Z zMWU7%pVFl$ty^J&^4K^RSJdXjF>B&Tt$^-?A}~pziX#i*$e%b7&&)4HRZ@mz$y4{a z4@QPP4%Bw^RnyLYDZbw138`K+czx<@agmmmQz>Cu8W}f@1jn^@Pq;Mg#z^g^kKf@Qqh$%h+-bl?VIp=!S;Yh&iu{>LkvEQiSEwH zYVrVJ?(cpUor|q7DXhN*{QZ)>eBY}-gP0&y8;WxF3iUkv#67S%dyCk9{QSrB$EW*R z2R@}6f-9R)`~6ZcrBaEd+g0NSv?6=Iq*s4(8$OYxfd`T?FhTyC-hWuaNdQ&H%WmC` zfy>x`hom3?@3Pe?9haVmYB3CFfV!k>HpRAJdwy`dghHdZXY-2riNJ!`&-sK8iK;e6 z{F?%b`f+Uio6O^IJ@)m~v1DoNs*2#8qS~uB!Jte&3wvBlwRYB%+tBGF_9}kqS<>U* znrh|?F5bc**T)Nbpit2}`_U$vEc zowdOi#pL~}tIN(__2BE4&w8djuNX^Pw8%n0lW=-wUuLB6nXJe-eKBT(i2RX}f)yaV zf8kCf{LOzKzxi@;WH&@j{0mA7DSNF@)}n!Gvr;15)>Vqfc3r;pWv zw^FP0w>ZvBGInjD6=^9%1V1bm^qOIJ0cb9p$nW6ln*wg9!aVt}RMy3YjWzcP@W{DB zFOLrR4oN#UspgWZdmc)leIW!V2FLs3Eau4f@w#_0d3Z0_{{Cy#U6?32S9-c$$cx_v zN-tSgFUQ)6(lQ z;vqkr2v+!#q_;*AObV25GN%pLpzfBGgsYnu(mz#_$0;g%llZ_i`7~*y*57r9mhoJf zZWf}*9W5sPB-_Ty0~Z|o7=!nu=pWvJ`Q8`)nHfJ+m9M$l?x32Uo4TFp7T|nB*GNcBjmTMAd~65h1LF zvQ=VPpuB*|4FoL=Et05{(r~e;BBL!ZIQ&585%cf7#sc(p9WL%O#((O>s4gq+M18mO zauzcD73r*LZjLS9XvM;5WY6Yt9_l<4)Ja2j;n{u`CvW2w7(VQ^@QGz`Ns-j_838P- zKpJ)dL(7q`EP9O9{4S%5leAfXVSx8b-~+QL?RyHzEshyMkv0>kN>Kq7sde))0$QnX zh5pId_ipUo5XC~`@lR956&lCOK>ap;yv0=Z zr--Tcv^vE;xrLRhgBXM@DBk1Q?jr045#W;0P?|W?(zU=Xb=pAS&-4t;ROv0uF10Z`X#w zq5hw^4}g_`^8$VNrTR1M4k86h99zF{*{Ph|lCjS(x37&eL=yb#QoJGFBqxX;6?CA# zNd6ui`j20ejnz6NxeiJ-xlVJyr$Tg34nQ@a(1`9zVSx8)4dm5WeS#uVxWz>F z1G2Z8ucg7@3U8D_=(=;H_A>(rS&)NF(LffbC8LzqdF!Mg5u#;C?swB42x{>MoC~1s zI5LDjVvOj=wRk1a7-BFeBl6d{69HB6=K9}r1N3jtwzds%V4n#@H7J_=5T*<|zw zaQ23yUzMX3%|l=(Bg^O}P;g5=P$TtnQg;Rr zHGlgM3#c;P80QDa;&s6_dUb{Ili0ss;)6_;(U82j-XHeJ3SMYC=|^yhS7sCvMf9w^ zUYV8o@0#DE@orj{iFXB{&5&jQ@@Ft>K;AS&BKfO7a-9)_qX=;}zITV4#HG+{n)vE{ zKl$OFIm4%=b!KP+fIWo$bni~v2M7}rJF}8H`(TZMiw9O{XB;=EK9E; zrhm^4u3#~lMgV37gDD`W0G}H$!O7x>*R}uD=+9y7%LTdH9{1tx$>;y-?*e1n#y7x) zmjF^O(#7R9cV#At=_M7~);7b%*bQ@f@O8W!zr zh*6-u8&K`c=Z1m>IA69NZx9VNVp0^FR&g=-x|gyTr2qt!WF!I`t+X=O;Oph}bi5NT z960ZB$o&3<4tSAZ0O}>3_jHnQBAO->piQhKf9)nOI^6dKqEqx{PTUV%7kA8t?)>BA z1hRKjKU#Bnok_AGeRgb3= zB-LOtw4ZVWk$Vh)8;N|Nrq$@NJZd$NB+Z2-|1}T~S%Om(>K4?u?Li(5Xu@u@0=bHp zQ}yq2BJIhA9BL?CYbn4K&UQTa25ZL$6>{Z34++|YI9#J(XtBYZ;_XGvaL%3 z8qZ9G=p3_d+GsLE0?xGVmjr;Y`w|Nz;F8w6*1+W|84t~h7#FUz#G4kpabHialw|)? ziCCeb8G{FJ0)n!D|6Lcf)4Be5wdpQZ_siC@2}ScaV8W}@XxBO z;t<*G--6?SO7>_EH+o)%K1h?J?Z;mxUdORD*G=uo`}4Vt#g>K5o!{fLo8Yjh~( zt?UZoq*R&;hS$-$5(9dm`JnBs2eaaRi7dVp|H!C3O8Vw?$3sfGExhmdi4gRIGJ1by z6amZz%<$KJ2s}{Yb$sZ&LZ{hFs!1}u!dLF#CcImqPgWvxnA7S7%-52iII#q-kQ@fm z^Pg|6)^ixrqSbO*4o4%F4Cp`ZZEP3_uSt#GN4vYnIMAtOQKlP;xI}%Obd7wA|3+Uv z02~4rnfC#gREUC#V`9*WRtyM;0ZJ$UOfy>;N%@(rAh7b92HfyQ6iEhh`%65}MSTFO zvh)qd4otpDU$!~HAnWkQy#ivq|7{qga3%!i=+i;|i9{s^^FM(SKTy9LNk8<{foD6! z{xLs14iA)C0Lq#04~^+d@de-EfiJ9f4C7_UtB|M!#ZjjDR)cDQS3rnW=jNX^jZsF) z1iS@3*tX8xz2NH5c9L(Ay+>tFrWYQ)qs@r@gC}f(g5n0;e((ozLcEvJ@KU&rJYSpK zr&&3n-Zd7GRx5#i{V5z2Hb8X}`GBm4U{OHGiVjfWl+Y(9C2-3K8`J{sZP4LE-;lat zNOAvZ`#UeNHkscQrq;ph74x9HP=??ix;ubZ3|Fa#OTWtrm=#r3)>{D3tOKW!<;p7? z{s)Z}`y)YXt)ZyCiniWiZ74i&y*kRzvuxK;;Nf2DVrZ-c6ME%APU#OmBL^JynrKV> zYv{+G-wZAQYm>jLKyiR+APEW;j0PJb>5NE{o6mZdD+fahMIQ+p04Oq`A?E@npC$VQ zoi@m-3<0flu{C)=PVb}O0XH!J(SCG9tozn4nD&Z8>VaZXHYj@rVJOSI<839pJj1m_ zU|?xH8>WGz@GPTK|3U1~KX)ulN(*L{KGb}xhEr6GonjE;?<0uhCC0vnk3x?J0YWXH zdFGCzRUKos_gz3DjQ2CE<)w8ANx?O=pNQari5&yu`>0FWFcOdg->L^yW)@kMqON8G z{06dL7G!qO`vwkMcflUtP)4Y{ct@B&9}R-cP$fPs*h<5DjPT3rSKaaa3xkhrCeMt`QD@Ubqr2xy<-a|Z?=g;d1>G?R9? z+zI?phT4zE#IH{y=o?E{m;@eS{1xomKw}jY;jvHoJg$36SQLUrJtBNA3Lb&zv<7Zh zccYcw_LVcxhyU4VY`iaW{^1?1LFUptF&rXd2~`Q7rTZu`$Da6%Z^jMfd=rhRnv27s zRgIMCoBTy7-%eBtaby7>*|F@B1LxJ1??=zX-=B-sb$(XGOWu30+6qdn|7mjPyaABm zTXf4){S{&OAZKfRfU58=-3vhF@Or;=C*9K1mJc1$T1mZhnq0wjc+21P9TU*%8(cR} zXCBLrIr2CHn0}$#)eeu`sv3^_$f%=j_oU%kwW)IvRbFdf6QbYNy~-cMzqAI$pKR<&(sYN%V0knG%9=C z?}eH=4v}?u8TMC)s26E%Iqx8PqCTpvzW}%JbO3|KvM;(YGxO?*uF7th4}GrBRPoSX zbF>lmx!LrBR=m-}{9vxs=sYsHA=ZN*6z0V%4x4A*8ear6=gIFDWCQ-QR3GGPAy7#; zxVJQNvE{2J7KoYCNP*KSdY|ty0%JKj@4)4_t3VcrW><)M{u)d&E5GsqnyPN|c4Qnx zy}1`m=!E0mTE3el?KLTD0hrlvVgE~Ti#90&ls^^8Mu8Hp?7_K258MYR4wrG4gE+zF zxY@%o!GYteeVx}ITfIU&Pkp!t`Yxfa!-^|I;#U{^>xp9JBnsr{_ND}7E9pjsa~*8! zp)e>Y3&>*=fx_9sk>K^bgHTvjLO~x0mYrO4NAHq%1v=^{$FfJI@m;JX5zZdX!>y>- zr5O&=;zaR**9F9hzC3!0h!wY5+-vxOOGrfZ`w^aIj5#2vxXtKh84}L`2N7?aicXnM zr16$GaSC>zGOBEAJzvm(78=D2*EUFCiyQvjB2OvRRtWBp#5k`eJRo)hj{4TP<|r)= zEbEOa1?QeLpz*O^*p(jy5dzs2kE4x)UzuJRbjF7k>vV748J!;QWNx&&O3>7;`gwA4 zyjag5LYUYEP04se?&OiAqn#rhXjoS^F*q~6&C~oPWe`gJkzLmN&lFMU0Afk|ipNKk z%Fs=KhD3cm#wx&N5GM!Sz8v7v_t$;dOIc0?@f9i-=w7i;su8yUT{$yXBB(XdKUo|w zL?G9*!O^N$*}F+r29%cX?S_?+9emBNLu&r`1llKC%5CgFesD08)Q+{Tfgv5`;TKXQoXID-@qwwd!Ou^Bp z-9~Z151Tz-qUT8Hm()jOe+tYQjz_1#}Q{fAK$IE#@tedIR==#}Zwq zw1`(95&(3=3>~j__E@bP6h$~Z-yw7HQr>wlW$wOb@A_lDbCq1sK+ejFG&n%&?M*Nv z0~?n5SD~-qI9Gk)g1b@+8(RWgj2Q)ucKj z8p?tE95_2z*#340)Gg-4cgOdYe^1URv6>`J>l<&zaII(zVh|y&B;8h^&t)B3c8|xl zUS;MXbWJ`c$f%p{sAraUl9+~JhE6=>_~-?H#G(E$GcS-5#4_K`!1YHcOz#DON9Z3I z->ivuTe)&~INt2*>zj7n?wd(*PGwOu+Yz2S?b|t9PJX}Nm)vaxiNwB*L8G#KbKD8a zQ~@aEoP|f)OAo2=kFHmE%IJA2Y1foh_Rol3L)6RmsZ8I5eop1PphxNY5nH6ex^6zF zPNsdS8L751)&BiCE@s55?sB7ak^weU;IF}f310=KxA=k-vz$)n8=3v;!dcX&a$&5G z2yUHaYeMWAKPazAReC0A62E*L^za*743|rznq(0v8D>Q2r=Dv}NEikRf=Of!mGSFy z9aM&9U6G2U)HhuV~U{imbyW8Z7_G5m0Wd8dAUN047s#s&!{nZ@kD{y!#>1! zo3pGaBft>CL!PxE!Ecxji3-HQjF|os=*@-#eM!IYi4vqNT52+SKcMvIVr5+H`cVG@)jv661-b5|1}-Q$2|_k)%lDT1(?FV+UjZPV@mH z1!YQVS}PS<>-l-{6K{$hN`inI!k3C8#tv(`r`nYSJT)NQ{*PT9dEbA#rUi-IkljzM zvusRL{=Fm@1jBjaVR^gx)sRjwOu?EX<%_aQTaC*SSI*Oo232Mo6svdpZ@B<>j^@|h zNz3}mj#DZ!8?IA{R=Txq503GP4vB1wUg_4B9@R2wc)(}eQ71`)^a2lVUfnJRWcEi- zDkPrM$lHgY+^jaJ47z6_7KPtovW{21AynUS5K)@79y~Y5lbr=HBbsFV z07{9hT_&P?*Az{*!vZRDsv>GE$pC z8}Q5MdZ=qVLol51}gMH?wHHn{IL=QDCO^ER5g|p!SV;4UdRz zRFmDU@H%i+8ocxm+Vg`cy!CCGH<{5+1H!jLZb?pyUWaMyw2vwdbe(yJ0Z&7AtR`}6 z$5n5I4@E7!O)slS$8DtMB_^D9y;U>g$~RnkOR)b_1({>rvo9`+7d_ABg|cp z1f0ml#AwExe25CM7vuFkp4++9(TuOm%#HR9+PW3J`u$kJ@tPvUj)dQy7|Eo1MDvgp z#ndlxmY@jDis;k+o#BJhhAthQk^eBJ^O#>B@5yiFVudd4m$r1I=NkCyq}AbmdReI4 zx*~o_a@QJ@2;m)x}K*NyF1R^C{QG9u~N$|AClqL>MIFsIGTh{_wQ}tC`zT{q*H) zE&8)mn>nlnlV>gO2PAMKkVkMc<#GwLxaRE3LSdqtntp|cM%sgl=Hxz)rn2%e6*sDb z8*-~`EEbtiS(7Qq8vA$mICu=5+%P_S?xZRn@SS1>@{jHP_%KPJU(Moq@0FeIv9``a zse2k?q>7}MYWwBvF?j}rVVCXd^?g;CLd^;kGeWtd+D7jh0+%^|7IN$8_dN&dTdVp{ ziq9^~6~}p5QA*_+nkV?=x`LuTIh$5I)qI`U(y!TlC!=)vhQipM%>Dumm&;`B^I|&_2l$Z17 znb(Y?)Ria6JYm}Uuz!rE<4E{cK;K(+fg&}%Li|P#%lXx}iaBaWnGPF_L@#W3FW!ZT z;_j{w&d9!HmylcP*GamHvkz)sa6-Qc)%an$gIlV2`rMMgeaSgxZ+l=fr4@eY4YT^K*_SU`(= zrrWE^_~<#&T2bOiN#kel;!Q-2__6N4r)xQNOWPGsdWf?!(3*DF3O8Va@ZF~A7ZLet z8o~bZTR%;Y6C}2oDh-zWz9r8@?MoB%F1iX_zgGM%l#Ev`pyfPdEzyH3UP!q2wEp1J znkzlI+l7|S`8%5mmUge^%GSi5h7_}L>gMIq>-t?wkC~;1T{vl{-qdbW_ghL+hAO!) zFxK?+&fP1G?|CCo%$8ivqteR%#Q#t%;wnzMw^(E|w}RfvXzMFpS8Dm$S+iN3^-)3GD}x74s$Di;T=f}FI*fY~zIeW23N7HlxmdiE80S>oe@{6s zedRjTG^fD7l5a`Qj!|C|L`XN)D|^`C8eaI7rINcBX z{?e-1xdy9)(lWP>{pNaN&ssytlvCD76L!4Y6!OBPGe(_yG~C)#kNsP9;dKAE28c+a zVW$c^-$wNd=6cKU!eN&I@i?I(V+DO)a>wm^9}V0FJgk0>k@Go)hxfls?swddIghba z)*DwCHI6o{`s~>JnHpOzjBgPXTRXHi)r^b8@|#a@(-$Q-?65RkzUaTtl2h!uh#AM=sO;Fyej>%wU|~XI)`4tUE{I7rQhQQN%le{mX_Je+#ku( z4(>dqThufRaSE?iv>%s9W$PCJ0e-%Z`y)*a##p0#-qK|GBg%{J*A%Uw zmhkB}0v5=qDM@P(e*H-q?MD6GR|dFUSC5(#xu{g{uD4*#Heu*i3eE55xIun?BDrz^ z6m0OOdyKo^!r#F?5B6pB_at`*i#bm{PCJn^I&BjeZs(P?yQdp%D>esrZ+K0=<2OG3 zMeLPb@++$QzO|6#8;0Gh;OqmfSM1B}nwQL;N;FToTiFRT)J!J$zb80lsSu|C)yNQ0N^1sUND&E5Oecj`5n$))0&qK=H-$97>_Zs&V?9l**))!Y(VMY+|r2`r4=okf`l zB8Pl!7Q)vHW8z!BmCqlER~MISoz{4bFBDFY%oPXRjTT}2a&(9kQk=`Wc(>f*xaE{( zoLQ@M!swL!ZYlQgoYeZKH0gzcQ(lX;Dt3lCRHV z1ENURsU6mH`HhRulP7RUgZwCsH$5H-vu=f5ShROK(<#Jg*hO491^ZPOiNrI_nQcbs zUhOzONlI(1wK|mD#B*kmEMBQQOeXUjs(n^ZJ~V{E4?UZ}&T`et9-Q zt?*I@JE_3testoTnNek`PjLEr(t-4whM)N_jZ>1IZ#R7YzTNuOa6_2EOKCK&B6IJH zNL>E!mqo8B`-@ySTMNtkCA156A52C!#Zc(&t1sj&o8QU2+#10?)6MS_elJhn8c*TS zQ3D7mDDwIQ*ESYPb{(6`gY0B`)%d9nY4Ao9N=z)DF*znRl(0{K!SB#LkCS*XXGX0h z@j%?tTA?KPMa{fZkb{cJ3vrv|FFgEQUu~YZ@M8=K{)`r}F`L$QP_5vZ6uCLsN!20U zJ2w<}&@JLTSxTJ6$zLiG7Vc!cxu3*Om!-BoiToKkQhTIsxT4#Mw4~C|?sIYM&9~S2 zf-O8GZWG1x$c4iye}BTYB~%>o@$+Qdp|fzn$hk?H>7z!C*{^fk;U-qi{#AWiV|yT50CW2Z?anOb<|znAiD3S^Zo#0S?JFe-9=H7HrvUm+s1JWGfSEnW{#X5=N; zC+v`^n_PLpzfURbhg)Z7D`cbuCkB*Nvd#6RTC-!gaak0vcxsmX`H0$qNM7_~nf%ALjimcp_9`z3;8*{loT5H@{V5#cZ z%jpqQE;rMvc-5h^!JkGMzjf>~cBUeV$KR?%i(~BQ@gxPKct3kY#~~+1eVpp0G7;C2 zC6Qa`=n3ob)YsH$dA%L|>^XaJ&SO2pWQ z%H*-87(#1HeJ8r&4d()5w&PI)=Hu4Axu{AK=Z)$rlRF-o$a=ingi2AFP#)xPU-1L(_A{;#V*>Z-uw(oA|mh;+bC*&nrnkH za9O<2Eq|#pIS0|JuECGg!hM=qX)nEB40H5N)S;hfy5>I}k)(E?Kk175YP)FD<&#vb zLq#OF?tFEKir2!PncBGKV{5DKVg32)AVJQdJ8Aj-W0xCcHevE*nc1RP+RH~2YcF(O z71aD}74>(*HGU6MR5x1S$vPCR!d4p45cpbNWs<1c`iN^{f4sYlZ6l^rq%mJ;IV4@x zc)0wTcmURev}yMew(yMfdYbY#YW@4-a=N$7qo&qAKffE(Z6@ZtQCjgdE$!NxK@kl} z$GYRzW9jE9xmymt{H1;&iJ!JivmK|^%zH*By{W_MJH+KHOGX`+UbeWCHmY9wy+z7e z+&Bz#wdWppV59LL+hB`rTr86E|Z^W&4mbi9a;9e2#R&QH2=GZ8y z@Z9)NozTAdc@OES{MTxp9#?0v`XV7Oti!S`8H(-4PBqwcSCltwUS3yRp|)=be{>jg;hsWh zol>*+=oxRlgu+crmZ>4Rl9dO{$3ChTV~*nL>XdSujaMHshgYj>qQcLeO)a*JMI6j) z_9OUPN0V3Yh2L(}R@wNx(J3`n4YLrS@w`|y8p>Istu3#oNr`hasJ%9pP{@1aa5pKr zdcU$ZZBwMv_2P+P^y_sW501X)$q%shz0bDWPghj4AR4UQDv}MjFUXMAjmH)ouKOO- z?mvYSB=(J{E9SUzAbV+7o_?mx%AfEEF9@it?>2q-l_qiOdi@Ufr%)xe&I+zC~!yf2yVHWg4f;#;kT-n#hCF~tCV z^-%xqj`qgPgGgOP1ev!jD=IOVp(syHZ2FTA{C5b_?w;>Z2GKg@L7>gWPr<2MC-ARI z?GbJ>{>$&Y=WZQ6K@#Vc1ZGro`rn*gB*?47$1)GlBFk(^$ERuP>=jN9mv}?SCA9PE z8bUZa3p#_27M)RxTeA-+iGCmv|p7Gv+sO#{^VPj<1sypn=zMB zFdz4OzuQWrQ)1MY!!vic+BJ!Se4{5paDmiGyDt)g89@!La2*3t0JE@nWDZP7D3d&@ zD3uJHfAyZ4-o^+2@dBklsz>|*5=ADU4cZ@Jfmng}BL6<%P$UDDp;LN1q=YPl*iY-} zm`sl)&1Y144k|%hj(yZ@zn+e_|1QRFp6QyI+>5n*Xr%qNVrZc%R2`y-M~e3|2z+16 zJNtVK_)M0}XP65E_`cc`3xPY}`^rS6I1eGa!D3U{kap@{!5~go+ErEV zDk~m+JT3`H?MQaPvm3pgJ3ojS(qom?Qah+%z-vmt77(*IKgB_JIW`sUSt|$4nv1Nw zkB5FU_J4WvTkvM?yh;^%B-GdC2YO~kk>-szkO>$@VA>hsVwgl892Sb)AOfLa&f%|Q zJ{`0|-aP#6oB9UfC#&(~a1}wy{BbwJVs*$akwg*}CK0o@4w%s!+0-o!$Wwwh_rZ9{ zN4_&-5-p?R(f^@1H)o{@*>yf|-V_HfKe&ThHC0q{MayoCCEew*lKb9wlY0WyPY&{k zCtMnLGP8sV#vQ`Z9}t2_*rdV&`$^kAZG%@3we%9u3+VKhoX#NF2u-#2Hk`)R@9B>2ImW8m_)5I4ZnVapu;bd z1@drK)XD83zfrYo2tP7HNtaKYW#>1x+Sl1JBie%l(wfpC3%M`IwT;1;L$Lo{nJrk? zf=&El>5hl*Z6%$f-Ggx!I*AvvaCKPM&}gqKqm(661eW*L3f9L{qJv|^YMJ*!B2W@A ze(B({nsS=*y7Ycl&PXIB++QdDNk?Mby$2OIxT}mr*RUSy(aO#=2zba@1i^<8XiFwU z`DHTa=-z`$^b-#sQ_De+nwGf|nN>0{3nB`QoA>qIsI6$q|9wDH-Pf^qYc+J2R#2xP zT;dmYve&FkD4is&!*WmeDD_4(N&xMOSkl~RS}$hAa~v4`wHQeVj_nV2>xb3VjS6~Q zxbg2mKP%Bq2;fFQ{>Psi*MQvkk>LJL#{s)YAhgZ!iuXCj`Q=v!qM(DDl2}wA#3Pj+ z@x53#RE_m|&B;wyulD)73%hlvl7CDLLnMxfsOVD)caa>)`btg&WmraYikcK3`R{m? z!A^Jb)ZpM?D}E*a94QW#PsCMs@;6{xq9HqWXVC&v6(m2zx%NM@!9_z&QF8s)s{YirT25_;ptZ1yj&eslQM0E?n>}BIdZcoF-k0>|{ zO(d~!yg^Ym*>H}^r`5qs?7vS<*tA~!+WW>$7`I(UhvD0%W9;EqSkiFKdB$-ZvYTK{ za1&*S}4*g+W$l$Rbd$F*tAHgfgHGIqnZ<73vD=e51AIXQkhZwIRFm7x3 z^aE-3;m*OxmcN0-dXTlsf@`J*OxDoQRu{MDZpg=3t)tR5 zoN4#{-ifCHG(9`0UugenyW2s&SX9~9E=OfGlGaVW;-jo4*%}?Y1o> zcRIPs?tpy7|L12_1?_pROt}{#F++YGi0jZ(hDGrIk6QX43j9V2{d-d$cz4eT)t*ij z3redv%BB$*iau*P^&p}}Cx8CmKM`tZvoW<}jPmk0@GETP%e_p5DM(~0PW^v=5eZ`k z;(+r$>VLK+|BMnzPt>IcSqtqLn4R^GT3~>~yrot(TTjsHdZ;A&$`>7=|DS%aVBXS% z;y1v?d_>yDO8oXk_QAReZ9Gsxn%3&ne< zulIj&Dgd}Mu4dxHHlwJ{8~9r&f|4M;+NWOU&ETzRTEDkYU#a^JeLwHRE))?Y*Ajaj zKQH_RV!vqP6@QRq46gr1brS=yCEgyjh$TMS1Hx~zw4??3pE!w|e&L-BaZMN>>c+MsNP(nu?`!C&C@ z7uFWCR}onGrc@(wKN?3leX5){wbMy(0$_RhtnIXlCq7qzaK!eY)$3`)qpeST<{w<2EK_D zuhm5g`q_qX18SsFNO=YX}LvH&DlTm;w~@lX(dMeR^$pSpb1uVE>iB!Nq6L8RIZh_3DMhWUG`~#igF?wj8B!zL8$>8P!?=8=|-3+h7 zL2wptCGfAPH=S+=-~>nsy=hI^Ei@&RVImpZu%a#QSj4*i3CVgxxiHoM9wC~Ds$vxh3QD60D#t4YT+O-Jq-pV*Ve)1I0Rsr{yA@zwfwk=Zqa_aTVd0&wyFP}l4 zK{4>{o`i^H?|O-P<4cJP+b+Ds2$O@j-GtIPQU+2%r*&uc8)M?7&jAXQwiGS56AE0j zT%6#bZu=Q~+I=UeJG2_Br1+Z1@+NyRRt>lPrHcE_xl)U}Wn2W*`jqYEw|A`%#`!7g zvKW3)ZW4-ke;cF7yN)?vK_S#E7I+atvJ!TpMQppXuTEQ-B(k@IJ&wLnk#xTkWFU>O^28(}*%SqGY2 zBk~U9>{O)Nu0&AHA>Oz(G}L})<0<08%mU{8ke}&@*%x6+E16411&iEUZFt3P4GG@Q z;kL53%kJNeoQoc#0AotvjU)L)C*z|lIpJWP{ZjDz&e*QpSCta-vu=k6=glTGWtG{} zF^*UgFE9jfjt{=gZf752353IKUk20g&cKPfbN!0jcAt5;gs9mQj8Y*zI8Zks`m(5y zuQP65cFo=@jL`Fns+|e@ZA!!qNMC`iwWWKCckn}q6%R&h364o?N%_~=$sk9p1?ZC` zTOt*IZ#;I_Ns*V;-sw>Sh->!{U_sOc&LIUEmj0Lq6`Ac)z;y0b&W6-|1cei@T z<6ZaX%iD)-r_yihY*naDrP}xjl5gjZ5n{xb@|Srj5}B9k_>vtKTktdP&(C($_w(m3 zYq6M{aooX!msv3#)u8rU~5H?$C+s5N@)7esf;f93!D`y3~y<^%CNlvu)OcBc?|u{B7OO?r%~$ z(p7H3y0YzQwBH+9-~M8Xp(KhS)W|R(e)A%u4{0fe8iJI$sY6=1c2d~wTV^Wy+OlIm zX6?sMNIHjkhw&+!sr_3EAPqH`b0k<3ntR68m`|K{9cl_|tJZ3>3d5odg>dED_EVoF zKjU<<;d@Al^W$_(=qm;kK`^Z`e5Los1`ug?{wVKO+?O5!DTsAZ7*q49;PkGH>Oq9=99NI#`#MDn9sZA&$yt+Hkt-6@O7DdC`QicR-}*H7E+d~~sPJHD z7JOQ6-@Rlv(VdAcv6n~{VOnCX)3rM8w)@mJT1`BHb$!1nx@PP8mhf#J_Y&dREqN|s z7RTbnFq~mguCV(Ju|0%j*oCbcrAm$boh)ndBzI%OgD-xkLuhH2Q%S91fuEmRXL5{D z3gxm5S=uRfOiM6mW1@29g~Ej!IYZJrA~5-Wl%zLzR&Co&W^)F`A5u?O3k4<>o~8PX zxkv9sg$X(u66%%`-wX|WL0Ua+FV!onStxz-^J{`|+}DJH#pxIaLs!X4<}(Mw6uSEq zZ=NLV>!vBT>@W#iP~2@;?j@mk$+cH@GZ0y$E3+; zATcNnt+4tpsf9|}d>3zfI|vmCvq=p;(@NjAB)Ua9Vt4YDqGe6FXG@T!K1b`PKO805 zknAR0m!v-0tn<07WaSb6##iB!0o#=gjExEAXKEaT3u5uuf<2ZB0jKTTAB1x#u{<>> z1;|fR2pS;_H9y}cV;h`TO_ueCOp#&oc%j`Fi-i;HyXK(xWBB+g6F>K?#sy{+PQBV5{?H`CQMu{E?f15nFD>ON& z%B+>PcNH7&cX^{~NNrOa^n>oRw1q*^v!I7cz@(y(cp(ST2)P zq2PG+%NIFd9MIsh<+vZSh@TR@^K!66>`4ON$LMh;8NXSW0)xD#9`VOiS^xSs?4AAW zQgvk_zJ)qY33%h;Zxu7LO}|Okv35t>zpvPI+_#|+N@ob&=R9g8N6?3?+~3EVaGkLE z{IfQrglf4t&N0#BX1-`#pt@#-Xpj+2tRryO}_RwK$6Fxjd(Tl&z*J60pr9*QpI) zV&f(f_bh26A-|$NwMTkHJ~ZKS91+P}4*(h`sl6-sf+As&VS$+xS!7qn#Z`}s_)4CO zsec=lC;U6A;O;vvl{c1$T9;O29h)oZFQvy6xA0n=pfc5t3VIY?;0iLn{eio-R#u-6 zRiczl*0sk($h$SihDws@x@E>+Pid_*^f*{cIkM@`;8hr6sukeOPczy4%BnC2Wkj_1 z6h_LH-|p#$G48p!5b3TmjOb528s}Zi@J{wkd$eDmDOtRTYRa}XRXHMzoamGhPK!;r zW7=L-;A>U*zgT44U3h~aAPq{FG}54SDJ>1s-6FX`x<%>kMoH=JQc_w#y1PNT z;mp3{_uTh6@AG-z=lz_&U~h(R%&b|n)|%_O210rK%hwcJM{`P@X`O z@hYo}e&@zYcwu#~DS!z+=v}vse%G^8yTtyz?WJ^CV^e&QY_9`Lod?`w{sXmw#Q~m! z6+%^O)IRj#@|hmFLV4PHC=|+iErFNH!IqWp_tvvO4&tGhGw>dS|Iz_CeXD*TFYtWx zcQJF7$;abnYJz7wH2>n*xUy`%tb=M!M*Y_kUAK-;_lA7;dOTN=rBz#) zvylIC=G%Kz3fW%Y<(83azW(eztM?6_&&lsH;WV z7F9txiWvYbcc2$Ntt8K=Gu;s?da8NX8UYy@+nB~`z*k#S&=!LyAbg0&i%fBJ?Z%Lv zJBW}oI?y^>D9kAkRe9F(V>$42eRNAgr`lH6Ai5J*6O#IFin84rI@xpI9Q>ep{#hBz z!_#+pmgRgC;>)rGX4*B{kSz{2mPfM;JqEndC=_NkIT~Wss1(X{j~;LqT({iD7DJ3q zjlGQf0h}s~p$7r$lXUvzTrvGmX3Au5ZnT>k+7Io)VL}R>(+LMfSrOojGWVhcNamnE z&0~$7A4c6VEDFbTeNgxLhR%`XouFfKm&v0uncPcrU0M5roz;L*9>cY_Yflx>gcoQs zC&dvh4o;rFOtqM)V9|vW+b-;+nQBuKW1Vo}LvCnBh%6br=OOxLUHx4MKJcap4>O1P znwTOu?L@bE>8ZEFW08hOGlzIP&z}V_D6f4eSuS+7o=%70+0TbUQJ`2-TE~C-T@LgD zCIfo%!upT%C0d_Vd(n+mhg|r;81z%I+|dt7u?cGd{8ro>Q@>TEUcY7=|>>kEwWMQ~gv-5E>Yzz0^W z)dX%+`_!fF)FV^$<~B8tVjZNhj?)EmuEm8zD7hs4A6(Q_9>nyx$0HoRlNqY90r1=M zE84U8_h(ITl&$qFEJ?ydc3QhX#30a+9M2_A_Pif>?w%R3asj2D>^&?U^u+x5pBm1U zhr}T4JI>Zq&Q}E;4r^z_x-IR{gf)~MSp+Q8`_Nvt^%5CMAD&QN;EDJSevOVg>6=D5 zc$gA6Yn_d4acUDj^wJ{gQdLbtr5N!lZ&#Ds>flf%iNUnfIL8*1Q2I*DrWfqEfu;uLypXkASt7H=2S#2)vU>x7de^f~<{!cAG(e z-yT)NV|O-taDg|?vbBCP>JaSf%yPjIniKw@vu*Spe&Q9+nr{^mLu20|=_Kj5YMxuG z#^m4yq6N7}%Hs|=9*Z2wC7#UzCu(TpA`aWyI{MoHt57HcNXr;AvFmjqMu$A<9{Y~R zDHJ>Cg?ncg(Usmo(aT;J$xe8ozyl2l-+PdUAd$Y0ysUkJZcSLrbynz98NQ<2Vz|iN zPPu;9rbm9wV$nS^n9f|bduK(6z8H^<9s28JxmQhBC!4gklj|~aKZc5G-3jiJk6I|d zU!myH%e#a=sHG=b?bx~1E9)ohvk2(!?!hV}NB+K?1yqUD1MV-g(e)_22m zo;De4il`0z7-vlwm+0qK&2CYdZ|u~Ph`G$lbjjllx7_~KMa;4hR;*tz*IM0G{+a#z zWHITK`kixo77u;*?MNjEf0Fqy_YgY|EJUez3Ivd!kXsVglHhT%MgZZ|0I$ktX7={R zRhra3uEgLByWkPzWG#N|S`>oun&La2%cb$~P=?wP`~er)s55!3X?Gn*%XaiS-8w07 z&T+-k`+1rtA`Q>>mGIh9mnijV!>=bgp{LvF=)LaE*2`S#?@iW;d6$?5zjVC*wPhC>AN?)@^FtpKG2k}has$18unN%Fg=-s&6`O$YtJow5K zVqhI(P2~)!E!yhXb-PyAb_0rwF1^T?BZ-tGM{>l;D}%;z1?9YH7p3GFi~K2A8y)>& z6Qsmq<#|PSmV6&Gl0#+(iKj;HgV00RINB{%J90=b+$|R(1p4Z|PRjxbC*B0`3D1@! zu@Dh;=8KLv?;`0}zx+)XlH+LOc&w;5?P=EDacM5t<+bIZTW4#5rH-j^f7MBZU+78L z?#=o91C`Z8kU!jwS==>`otQYXI_4gsvodsHWF*2w>9yl6^m`fo;8$d$dzw9s*+q17a;|arH+Frc4DFfg#IJUn$64Ea#tYjHI~f8V)od}mUJAnTycwXqnV-ruz?IYX^) z(OGcvq%4S>BdKbM!wVQ5CgcW!JzytI#MJ_Uxi~G5roMYm!TX`T_WA7+ORD$&-+P6G zKXktw_=Uo%=-zkNPgoMU_?ek1XyV;usEZ%nYS1S^IKYmgP`Yfoz|@VlvCKke;u{<9 z1Mgxp?AnwNXy;1-zFzk)Z-+{!`^AZB5wTq#-8%1xm+Na@pt-F(v@AsPtl_UAn z>`h%@r^eD)G{acad`9a=elv!rbhvQTGwhxD&9Cr8dg0-kTBL_wbvIiYm++<+kUxum z<}c4aMM?Bclra6i?c`&L1J_hy(KN2`YqYE(o~Uq&$aip#(}9#E!qkBk%Xa6lK38XO z#Lp`yT*ODtM1keX7OL~S3As|eb^{Pp2uEA8V@n{ELS#JD!P-_csB0YK8XK7=uMXp= zg6(9*&5mzbTdlhrF_!C6cUnpDI-@L*@wad6LJri#;g}{Bxu{+r5L~+!;=zgCT&^S< zStYrg)?reA|^TP9rtIvbYD7+p5{Aoh@95bF%@#zqFgOp_o z+6mec!)R!vit*B>(e9<{k)_lNGuunoLJ;4pQ+ZEk6J)i+eH4YOa-_zCkI~K8SHtTf zA3vxMho%IKlE%zkJ>$o1X_00Zve~QOmvS6n+PL;3#>@n6QcQ0gvk3b&DSO)kEPG}Jq9k6<(nuX=a|3p-Dj42)E#MA%cd^elCY zzuh^vI{F^Z6@!a)$c)GNvq$`G?rULOsSUE)3|*qKfjQ3!omA&RO|SuJg@9DL0ycd7 z5apg)`O?hzYUs0`CtFuAmvNy!;IusTN);Hx)2QFK$Y2>V(KZMQ&)Fr6cP-N43bk_Jy-Zj#G)HkK-qgS@;F79O_#MSm`j-aM zN@z+jtL?Wy^Oqwhrk zXHz1#>NoSkgwV&F$+%_(PeXUXR(U~P23#qrxFkQwpfz*8K5-9EV+r!pkS9cMM$A;Z zt)tDQLEFHZ7~Mck?y5ec2Tx-;$RoveCeZMTYQepNypA$U z22aCg!tC;hinMVSo{{u5Qw%0N_=Wt91t%%&7t+^TaZ7j_TTr9?JGw=8IBL8QDzb=` zf|QLfm7M+-_~{=M=|38p{`t zfLo>OgwtU>2sm$FayuqsV`B`#HGT@bI0}TkrW=)0TEu8 z*_ZT`6F_C!3;9r&)#a+=0Ekda1{HfjvpR@ahg4<+a{yQ1wZ@m5P32=ngt55$^rdXU zPP0gb3>2%i6vN~M`~9Kj+3ua;02yMxU z$l9Lv;a-kvpKM$7?NM#6rx5Ed+(%v|c_HY|+q!&z+4PH@2ILj?mv;ddX80l%*zlpeM(`~v288M0vawq4pWbFcqOD^! zS=GT_pFPcwt0}N+7tLJXa!UUf`szXtl62p#&gMDp+5A<{^)R33=(AvS^f-f$)#Ha` z2?N=vyJe^p`RM}vW1iJ-DHJSf-wS%uavvn9eX`3o)nCz>kyc&UT7Qv{H##?6$zt>4 z)p7ekP>xFB&o6jWi!M*wzW);77M1?_H{>t%(ZY7@(UV{?x|kE32?|R45Z$! z>wkQB`Z2T0d@p1aKH(VN(FpEjc1(8xj~$If8L#VC?|jEBegLj*;%pgLImOnm5=ZtQ zy^h^)A(f5kMzV33diOS-4?3*bIg%imcpvr@0<^9{T_=-`EsGC9lc$V)>Jf#S@UP6T zCG0eD5PKtWtc|!3jkm6^ew}rtd6o~IqGL_b=JN#`%PgDCFHB8V<~0YtI}{nxTM14_ zo>g#c)?JKMu;C>`f$YW8L1SRGiRErw7KOaLlp!@Wjyuo!spIkR6!J6Zt6oIxO|Kcr z!^k};y-hbuv72(?$97h($oRZX)$t_|qqX9zrN;`Ib^^JSp)yw1Q;3nInQ%8HJ1Az2 zrQ@HJuU+2?y6@WB)S*y_`hDvynaFx`YqD(Ga44$=usQ5#vIUQpE=XF#OrD5TJb~YZ z|M683a%`Wt0F1Wh)9vf_x|(M%Uti8?L)h(9tO*)(CcnJV?fY>-i}~~`5*$aEYJuxm zPr4&XB)-r-C^V%sfD+Blizwa6ujq)sGX;7K_>0y)p1*`u-jZ7L_F@j@X??6nFc!-V zn{S$*5){2 zuElYNqVOWpVm^<`XIGu5<3$ZO@t#Bc>C;p&xdMf18wE(B^AGZS&v8W19;jGm@nnBx zYjps->8j5!-CICv*n_V*EeDcAsb{aY?&aaAJ=K_|S`j>0eM~~M10a+NZ%DVx7E_89 z8g`OUOVb`oNWe!IhTYzse3 zP5&@7UQ?aUWFzqFF?Yu2*iU9VZON)Xc?y_5$^=lSi^S4ZtXW(VQpsTL2QG~~A@xLv zr0Q!+kRRNB>l!sxiW`xed=XPMC(@FT^5fX1 zd(kXI8$TL_fx!X{qx&c9Uv+s*lo-b-<2pJRx=oeVPmUm~VesWtX!z9FN^j8O$hX$j zD>^w}%m@Cwh%rrDcV^rzuNtpq!FlG5sXuRc6eW7KR5h7B8M4T1J5?`OoE{D_+DMay zKxgC&fPJCqC_m{Mj#ktSa7>M_eM45w6blMJM-ty(g-jaPj#^LJ3;s+C@%Od3EfXM3@8te3po=shBQ2R_eyu69$6&*C~nK?3m zpa$ffEBfm6nKbN0s0b?$6v{jP;wjU{wo{R_!5r7<7IPh4`C~uMTw+9dNUe8O%=hj)PE=OWbF*6FfZw zljm@>p<1JYU8gyU_U@}S?zvX3#HyH0$hX7Qz;sLNoy&NuyKTXFn)wgca=Ll0q#1p9 z^}ttq#Oj()bam=GV~@CnF*(FLy7NiGbx>ZJMDy3js=`ZEa68+VmsYYMVx>K|V8n&t zM!s}b@PUHcuw=|%+baNA$K<+B>66+rE#f)*ExWgD<%4ZJi$&>K$_pro3RxQ+DU?J9 z=l$%CmU))Sj`6zODF7Z^%6+r7wuRrcVoWNYizntOc<%E+#$cb&Ln^%m^YC>c+$DX! z8{hkbwTH=Q2JMl)FQBeR{65<6{N_Rw?H$f_nU)mf#2*h>v+Jl&ptwSQ$2&rQWbVhQ zekrPHkm^)3;xJSt;e40spf;~Zh`+ZLGP?X7(QOHlWaI0_@osS6nPA=-N) zXy9if?_{+j@r^`E0CeK;mtylNrhM6-@5?{}N-yIrQuPZZL53~u#LmK+HlM$E)acZq6<@3hgqX;b$TVJ=p5Oj{^3dNOZ8p&;!-X5p1fWW6V+_3x#5`?9 zs-Ft!Hqn}SHD<;-e0NUT|~Z?A&d*E?v_mBc=Am>OsG zNel5!DM(#mJ(kTgG-$WO+VeNG8Oog>nYPeG!$x59b|H9&n*N42w(nrPezT1aoAz|z zydvnS=Yerh5)jy@p+m(CcpedRNLUj_K`H!;gZ*6I zWf>KHwUsNBdW4(&Hx@v1t1|rHV-6^Ir$#|PcOsumM>8c^PNDAkY4ZH*vxsgdhEJJ6r4064y`x@A}tZ zHp;*h+s6&0?!|$|Vi3=DRQJn_;?NbOD1&otN%=Fd#@#V4C+eomJBGT>so{&t2n1SZ zZO+3xB$SlXJ%(^$d>PWFwr?5u8nF_4^f`;bgj8E0%Jrq#JPTA&x7(Z;Kc8-b%E5F5 z9f86&x`~4lAxXV;2f>DTTZndggQ*ZxWgGqYOQ3fZVJ_Pfw&iv1jA-4R)e)rHhKZsF zcXMP4SL^aZ(*s?!F!h7-a11bs-z#Q^S;1B(|6~V%;`$R_{#c}9H7NuVZ5mS~0Y8Tj z3mKW7Klh915QD#@jtqxH51m=ev?2gUe~)80bnPd?^H@YqTxl9!%KM^&>*nP*7N3i( ziCxpDVE0uSS?PBk=3|i?!t+;~FTm!K(%*nDur$h~gF7K~zXL}(K!!g=NmNjPFHzqX zWqtzNP|O4t)S@sqgV41+4Qt>Z?au*YH;5WAl>iJcmNmTv{htluvw8l3Q_DidTN-7J z=W!zl`dEJKw9w7MZxtrRQ|lRYO8H}u2r+WEt~{O$T=~Q#){ON z)m;I+p6A~N0q}*M;prbo!}*cB$?Nr5Sr0r<5c~Bn9;Lf4@(CR7?$lZA8@sG*X`h^B zX8?}FmieMpI6Sh$XA01J41sJHBPfq3TF@Fd(g1G871?74vH&@>-V{6l<2EF^sEq_b zj$9|{&Z+Q$Em&Zv0aOvdX`cCzIFH8#b}zfUAN-}KC*QK{)O2WGt-kk-`!>7PeO!~~6VR_j%Hf!I$HKG6KOA^A zeo;Z!r2~w*29AFZ3JZ0SA2e#&DqKy0k@b2wxb6lZifteN!FB0}V+EaX_);VZ(9t<39i*pon96E__B=l5%Uu%8EH@iPT?rf)@K&^6)0pxgYb(LH%*W|K~17 z#9Hv5KMn^J69I%4N3bhlD|+DC4Xg+i?(cWqgAc5m7#i7?{xPcgIf9EsV0bn?Rb9m&D@?( zl0`{r*kTG)NWgVa{kDn+M*d9&jH^KB!A=)=f4-Y^M?l{&-}GEy12*pY$mJpE`9D5_ z@yPQrhX7*}g-x!%I9Cm4DFV#mBh>y`S>H!Ye9FFz#zA}X2v%y9Glm8%a16vIKF@u1*j;vMPcRL-Y z`5?DuCJ_LqeZ)pDWFG_{81X^ZKsN`XYyfu{#Sb94k9Xm>fi4dGBmW^CKoP3+!B=!< z@OiAr=CKZ7z!`{5J`FN(V)|@ae&3l}Srg~o%yWD->VXMkjF3m$U1JCb^*kQi^ zCkFUyBe)?wfsn%|z<7e!qnHCX{5J+T5+3Cv<{TJ}_RsiI2{7|S_}e@I=y;XUru#T# z9(r0PEc~IRz=pZ^wTz-NiCjoxEGsMHOQ@3D8iP;vr?^i?Vj#6j|2AUv8jOZArID`y zn26DIWzSP$f%l{h{1=@Iwnz7;-}U7E)2;u(e>>XXzVo$h(O%kKf=cd&WWE)%#k3m7 z^KK+D*W*CdXVtX1vtNDbzIcQxFVS)K(n(crUaS5Tun&5i8GlZX`=-?{JW|(p^Jnm< z<_D@IFG8QE! z@Z;M^pi8dcI8yAu^7%37uQlM@84S%|uD(O&>dqzwKCpG=!1RFOZ+6=-zW3h?0H_!j zP87A%-D`(Jg(pcE)k|NB8iy1HXnWZ{fA!__JefvOvGvSWt zmRX6D+9W~sGMrMhr_0)XaqVCvzrY91+};`X13DjHJ=FnK8nAzg$3Qd~2bNwPlnSpJ z7C z%;8qYYK6XaFmNx`BbBtH*9w0Sw{1DtHf(8yJGxX~SpKQP(q5=A`_ZskHJALD%o_z& z&jUANC~bdpqKNkxdfq;?q~6MdWz0?NXKCw-<*X+>b#q{XRQqitC9o=<5Ij)Qp^=3r z?12F9F9~LAgsk!7qTqqZ!mFZrVGTHq(FI`*mZTVyVB{lS&hejrHZTIS;g2!?3y>ys zx4ToqEwVj4`D=H32`^>+96j<}_y&zGRq%n@7t^~ob!hi3YT0HvG3o8qj<8UhxcY23 zxlJ{LSpSq`Kr!@otrhS;G@UO2_vbvH-(g+$*tU3&y&3z<3mhpw5$eYx{cKnfc}j`m zQX*8oZ+Qa4HAwuw480Ywp&&rpzj0Jj^%d>tVakxu}689%(hSqFGB$R$tTn^O{l-wMIiihs)vBUQ;PFCXuC*JS)Pu< zWZCcyPNe(npauz4zMj`F-F<^3)!|H&K-f!Qy+0|YQjiEHWCq|F%Dj{_vf`A66A_Vl z1sOdD+vt%K=}m;9md^$X0IESr+icEZg=P{uQyz)=HA8UC%)@p?De=W#(SGjz<&gIo z)HubuhW)I~lKvJa zBCYh}u}HG^?fGZ&Ze?2qwEFJ2Yi*(5%hn_}lMS;gTwJwT-!hyDvA(!2wlvz^)#Czo zSK!;rK55{@+7jm5JR_O|8*S>4RpZv`mck_u10>VAgXWzEsCU7de)M``i_YB9>q82vP4Qf>_t2c z7~ORiJ_JUJu<>03F&zU!9U>l#6)_9n$9QCwpl!eoXc6EaPNINF*q>p(79tilE{tN^ z&_}xnBIdZ=Gx2N0%H+f<(Jn@!UGQ{x9w;^OvlPS2JYa8;6Eo0;bKG(6&d@-LC^B zZNWc0d5ccdW0)tGi7$EX&3lvAXgK{TFLB1MSa;&1E=F45J^#HJiStFv`T?L-are95 znBJTp+xB}Ov~Ha7Y*bN|&zB`(cA$jLGk#=dTqsw9QoArb#yLG1s8h?BdnCY#~P zI`4G=xDp%IvT)QSkCwi2=2AXJJL`kp2uS(q3rxwIfdMz^3duPIo)tzAGL-;tXx5~m zg$ZoOjc4TbI;_E9=!+9D44DB`#U}Eg!Fs=j=${ROK|u5$D{n4&QuCq(?oWb_5;)Qi zn`QP6P?u&W(VT`r_Hc%bZ+8DDmwFL!sfESr*{-GFve{OakxD_>^|bfXlq9&^@~eM@ zZC0kFLYG$THTT1K>*w4pdKI&?j|!`@k-NznFkc5}{ojgo&1MBKOYcwhUCidI13Qf- z4<=ES)E5lgJYaE1Z-~O!PICaDfx94Q$f>}H>Y$tc5pB|eXw&6GTG$^Pb}8_ufZv|; z&p|Lp=MyjoqFqc_sQwo*{zo}(u5qbu?e|gzKC~fLH>8--I#RGA+5}T<=zB5FdzsZ- z%0+&+18h|^C6YQ%kQqGSc6u=90J1B=4-Y0ltN{Bw1^dkF_F%@j1&*U^g*&o255f_d z#a-qJe*X12ll4CUJs^dEMBj2#&lP^JGt_yUE44%BTc6)+zR$^MmAz~a75s(%FB9ME35z;1Ne zyVG)>wI<8536`1U89mQ(7X}R8EpC_fJIk`e&C}EWqMpGRWda}+=}@_8u>l!sY5RfZ z1_+Y;=g-kW9`yen;velJWh}-Xm+qY@qL5Xt_jk7|u(qY3+Pr*DG(7Vl0+8qqkp)uz zkVt^VstSkK4N#CSW3-y5fwYUzZGl@BuH&3xkr48TBK^y`Cm<4gWWcAx0mH|Hi4XiW zfPr;qQwcJ^m+1738p&z`F4u9n7qM zTpR^sI#{Dvnt)I#LsQ~KC!lkC1-)N71vTTA#D63zRkhBGHP?8Hd#(3K z=yC&|0-h(~`CsW-$NsB_Ucibbl>Zvt|4GrrrqvtHrg?*5x3>GtSZAD7^Ti7+tKju(PEAOjxydEH_N21o&J2m-Pk zwB`e1P}aD9{2L8cr`h~F^9A`)cp4iie>ianCzw+FBs_3K!Y*l-q>*-r#3dFVT&*H*LU~jYxlGdjpn+cXCzJ>%s2KZ*esR_}l&1=731fJ8kZ zQ0;O#Ek0*=Iu84N?05Dp&~VJHS;5F!bxtcbF5cv1_!O*h01e+2_+k@i>5Q z>NLLUPW5+EN(9^Gw!1{6qr!2zzqqory~mvx@cP;q-jq*iTLeo*P4LObNB-N~|3~Hz3V)Ut_J_)&qd-0-Xa!>df9BTCp*g)#1D3MVvod}U zl^Oc>4^lY3nf%ciSwq(q)I+EnPxcb;7zT_s&j-^|Rnz1)(ZM`U=W0{;+rLI1CK z1xUyI4+LHU1IZ~xew6QEXj9>!h$1}X75m6@R_1x)W?NbFzbVWfPy9n+)^nN*?SW+a znYPto^KhM0??tEwfE!@5;El_Ielh#}Jb?>%MT;z>mjhtv-adToU;*nmJX$hn70zxg7!>d~KSIj$lw$pWC4Rc2=W;O@CMUT`LMCI69JxUUUwtQOMPtdAJx))e@*vV|Ns22#xLinC(KzYJ=NSWL!=uo1Aa4z4lN{vqM= z>N~^;+UzANFri1%eXrmqe9hT_}*tj%l6z9 zj*r0SjMrK5rIGp3D~d^)+%8X-jHeTI9P7uw{eij*I9OP1jp&(=%dF3QqmFlU^GY}` z&&F;g2rM~o5a%pGemK_Z4S^{zfc)^Qdfr$HVX1%@u0N(+Q&LofX!Y@Q47c%HxtuAn z3T}~D$Whm5?dRNrHm3Vkhtic~ZL+q7^u{@lqs~2$2VMqJSm(<4XdC3n1h2iv1>ZCT zjp#LiWKgXkTSJ}>WQRF1wAQAtKoiqfA*PNvpb4MFh#D=d32l{z+8<3KXhEUl@BB*O zuHQ1zt(}~0sY6szI}M9sHIkcC&;2@s=RP#6-#a1xF|437F@p<{Ux3sfbzPSmjS+R* z`g}dYTsYIdu`865^IpF{d?K6SNPgG6i5W?UHH-0xV!B<@j}VsU!7<^D!ImGj)aUVV zU?vfMGg7jKO)*hvQ9>BP=P4WB1T3!QihUjni%baNjiG-w0J{o*2l0cV#DdYyiz!ClYIT@-i*MN~n>WqakYc4r@ zla$c^T;H*AE4Z?}z=o8iVcDrjICK2Qxxx=#ifh=AR2MwdCZ#lg66~QE*yAT)Wkii8X1;Kat^<%wH$7Px(E|FUoE zn_VCVNB!jKUAh7+$COT}i2?4f?dGon=5?d)BZ|B5)&vml|8I5mrtE`*8nASP2>%tU z`Zgg`0CoK21^6V7_3}xVlPfnt7A#mi3B)2CfmnpX1AWLG5Q~7k{GE>qLQo=?h(=JS zUja@8h&ueA`w=T(KVldk1h9V^15n2THCuQjGH-UWhP~PgrHSs&(}ulfuoE`l{cVU0 zEcOm3&3pWaShknf^^PDQ4R3J<>B%ywduuHSwGRjvb?-rd-#vf84B{a7hc2+>=4$fq zZ5lARG(%Phkp?pSz4NyOa{Qs=6&<)p6{d9RB zl~ah#8sv1Zy{jgC_6WY1RKuY^z4=b>_`)(!HTJXhiCyfIfS+Xp>w(OAzCWA`f7bLo z{OYwWR~1ScmYY`7`y^3ok9H8u+eTJ)4NNXfW<($Dt~MEc{3C3)+AqZeg*N679T`*41`a#j9Ec zMeo)9l5#0^NE8p6>z-#v?`tLJ8wIy&=0lRBHhsB_Y02|d#n(uUk9ZCPnY6Byo;GXYaW>qC=EUx^G1=w9Jj9i{+ zSz;>^bV=AZi(boRD|Y>@5EuZD{JvwjrBkX%aIrg_g^#@oe|E8P?W?7gLn`h^=dnuL zFNfXQ4ePO?!Z>~Frl`3>~fJ)EWY%miySBAN|(V_M2%FV1)<;GMoTJY=lv~T zmSux%7dC_T-FoYFf4K!ey2vuNX8m~6AT}2;gDl5N^oHY~Hhuj$_;>zSR8BI5NwOOi zRiU&D)Ei;RNPC_AyxT+fkT$sYXob){(bF68w{!2Psv?N|e*|Au9qFwr*Uw7<`N#Qt zoNdg#`m?Cxf)joH&z`>&IThZcP~hZ=XcGqu>xGUu3yV|W#9AP324*eg%{*088s8ym z-_jaDaacn=NOp*y{OMTCvLW4>c`oY|9l)U$?{V^k$axkAD2ori%+q>s{xHN;(||IP{-0saMAdXoqDPQ{;%oRRy-8wZ)JWyg{5!*e8pKRWCy1c1@1G8T!SznaDxes*D*yTUYa7 zIsjW|=IwlBk-+&6rsn<q-Zm#trTDxLnMq#)=RDU_FM#I7eOaJx}0;$4Cqw@u&K)_*1CJLmlt zn8c-?;T5PkcypaLbW&wZ5Ewz~H$EVl`F?4J4gM*@YB&R#q`4f8nye75bw&llTbAcS zheYrLdm4gw=D8?62L;`FoW~6o6Xc(r_A8M~wfq`XFxnzF<|S4e#{v`Zo=(n=Gv=*6 zEI(^WfKY{xnNwd`3Y)zAd^L}cEdpUfqcBJe*=A(rA)@j+XM-=^n{zC@Yi&M;L}Y4R zUo@tqW4$7h+cjzo?yc6T!zHa4jdbcaiw+TmgI~fLf-F~Fh`KYb< zhW1Z);-F`rlOETemz7m}3%QIGYIL0Ml0Z=sA`KMdBSlIwW1@#+;|Oayr``H99MT3z zntg(|&4#~V3^2+0wEsx_{Y1$kDKKR3+@(??_V!RVnAf98`3lZ4bId~q7uVu|zqn)Q zMJ{t*V!P{W{?GSe8>Rivg~HF8X2t`M6evczncqxH2pUYaw`AApUgs}9S`hM`$=Fp` z$4YxPUd>=r`R**^)qWH1hlBiS!pDv0fo1sB%w?OAf-doIWlpz6#sljg-*1rhHN-Yp zQRT2)y=0KFCXb)P^D$Y{>L1*k)B}E^LQWaptmSbvU;6h2h3^Ue?IXW{mIhYrad+ zHGO~dfs?^-Mt<}z>Vd3z;jh@7=L&J^79W^_xjai;TCN+^4X=ep8}i~Se%#@>h0IHpcAgLpdY{sMMuV;!J)~sK4}8@cv3>o-#mQ z{fTz^Ch9oowZdg+1V@*rcu>my2_Y_&?49@XPxP&9pDRrHdr8toO@mOX4yprgi|XUf z8(Kqe2{W|UUfbH_+)8Y_1CN%Ft)7*I`5Yw(T{}nhS2eqUbEVC7aofoC+-pdbCn8J9 z5bd!fSpeP5Rf0OXTH!f$FmLpZ@v+)gKao(vvh$7c)SUxQ1v$-6_IM?&NeK?&6vp*m z@&VRy_ir!f0HWMkma4kdA?`A5>V|KGKok;Gg%g%~^HB`4#4qB8Mj*o~a0uClEQSBx zL62>?KDf#(Cq~qh!il!J%PMgKfkO{9w<>N=EiJy!*Gv;2pmq80!6VfKy zG?_`}Sai)3VxZF~A@wHcNz&y3IdjDJ)4exXB9p!Y4@|u<1cyU$YIc8LIWLc=#U9Nm zRNSk%vYNJYz1FGKMf;uoDymNL9fy*Q@3YJ3mGd_er;(2+1bBZC)Fv8*uMYQAZX3( zYqcxRFKU>52oC9;X=Q4@3>4aJmRt+Kxrf-VupUi2+Qw`YF1hO= z?$r4mQmc9jA^r}P&nEkufX=~^WIwa0!pOAY7SC7JPlT0DFD-MpM%E~c7GJvq*=TIx`qDlMQJ~$qplWSMG~=v&87=6{j}>}{&^ji z#zkn19~DA6-A0mqS0!tj@G6v~w!>Iq&HB}pMG^q>@PDd&I7EGpl7Am#E#s7Wp^|WG zAz6o!J*b~`5^#40H3~hp2p{o&wkzN^_zM_Lts;cDU30#u)>2 z2P1<^^u+m=E{0Lz8I>UMqOeTng;q`p{R%5?V*<$nC;j@{bmZx;-Z9fe>9|r(E_JFZ z1wzg_&$~|860TDW5V0Ju3!b~%b8ldatnx~0+Ec1#R4NzXva|ccOI=d>+k3gSRi)W0 zx5m79C)9a=Ra=k-ghP<%@`9YjSM?pDG^9FKtoVqGBNSe+uyC=+<(&rG4j|^+kG|1QqVmmaV**VUV87xyA1Zavay$=4C@*#>e`+6 zSjRtKR_1hS!1cF_r5^LhXGT}OGoH$=6Rmo_q|a~J4jx&4_&_JNj)ih5Z1;=0 z=pvOQi^uMpiRwrUZ3>}u`25OmUZE~J-p*%yR zRTZ;jm92k-xtL^5V)a>uKp~QjgrBKtXLfEVJhn*o*f&lZchxammZoOg+RWrzS{cUQ zs-`yTkl~f`^S$vmjT=1WS_|5B^tQDpwD%mS?D>~=A0!E)7~}KO@Nx_BM1RPHju%e! zGdcF~m5Yja^&?;n3wv+`EMt%y2FdJMt&}}0AXl6zTrEntjK6Pd33aEeugO`@^GDR5EOi`e89eO=8R4^; zoYl$8ITerj(}mX%L;idr%TEc#_Qa~kSv^J@SvQmUeMcBL{Ck0ugq`y2VRAFfm`~Zx zQshfiqE*CQ-*{AkX&-Oo(w|x3K&7qBZ&SVZY3}*eaXJD2??GNN1vj#K47cKr=Vfqr z4zBLs?w{#LQU&ChmkKQ>`$D2`d#uW1gwp6rz)Ov9pwi#f&Ix&{u^BrK+nywgl*Cy1t(_`s@6#k%kTu45MSb$&6YPp& zZ2cL+a3B$nA0gEifr-#PlV<-^lpw+M7As`1izWL)*fo4J#dd1&7wXqvmo)|W!RpoLWW zTS7)K!2w`ge}pKjzJ}lWiDRb&;njR2dmLYst6y_3{)tXrxtVY3{dJi7=$50U#A8oJ zI585*-&+Duv@n-9VdVEJ{B^x#d@0LL2j_<;(@9K7sA`%tIfT^wQ?A50N@%-6=`_5q z@0ZWb7fG3r_Rf0`rG@65x8%TOgq%d29v7%rFhCg?4^L=4`QSe!Tr6G7(L4G4m=PF@ zc@TA9r(s`SDSsm>`2D0Pc>>Dy+VT5}$B11V5@K|WkzT#1$cpT_Q;9o&#hakRn>^O6 z0-?9RFiK3chh=If_Ng6j%asyxo-{Rabh_Jh9bN)wBT2p0Q5aj#BhjIaTtfw0Zc9b4 zO#3AZX>KZHYIS*k<>tSC<6m>fuyyVj|HHa`o;qMObJt1v1+@fxAWub51R*x#aMc!f z_{bV>RO$lk@UUkCW187F1yQOFW zuK{2ET84wTMzUzw{N68??6j2C?wG=nhVOEVLyit5Bs?`_ zy}t1He^>8`BT?urXMKJ8Q^Aq~m(D_+VJ5jMS^aj>8ugTRL2d72y7gG%Eh$aud}beC zVj8pBY3BMj!jb)lO9Ds5`ljXOZ~j+%Ul|qWlC=wj1PH+c1cJK+2!Y`465QQ_TX1VM z5G>FT+}+(>65NBkHSTVW-IqCM?maViotb<8e_6d&=>68}s;=7d>}OYX#l99lT-z6! z+*1ky9LvocJO;gr6>Z8TJFcN_M?-|Z^c~2I&_&jCIO3||@w*Xb9p4!Gd3J8Kmewir z4r5pmj2)h)mnBw`d-W=HxT?lDy+=RlbLUpqko@OgEiIC$8lGlFiQ6PywmcwCdU^Xz z5cM8Z4mZuY$Fq5(MhQ6kys0S@bDOrDu7L}Z@II0> z+$xDOx;Ql|s=gSjOSQ1hT-imYbvs~cHF{&65bS+6y|jTP;ZbNBC)9gw$k%lQN%4U0 z0B7sQm^~c&x*+-GZ$#CD&R>}bUU6|pMrHdLuOr58-w?J#fvU48#HDn zW-3zL;z4&7pNPupnY;@dfg@UZCUF(~YYyDj@v5$)wUO>kB@?S$#vQ8WPKE>q*nv=& z5|~WHLCP^Ze=#Rc&&`)onggLfC!BP=d5k|kM1nt5kK4E&vC)qNs}MNHo8gM|E^}bi zrd($o5VF8_4#$6+kJj|ea}RGmwe=!2FDCU7(F_)o^&-F)xZW-j=e|f^gj~PKT+bGv zTQQ;!%Gaxtov7|p!4Mw)1hWduS@tI8@ZGWX-5Wn1pBSp>@lH?NIl(-4%-1i!h=p4_ zX=m)~-(Xf+fM6-hG}%`^o30$NzCBAO8e%Linl=i-5DH(0h+7j8|(FrT$G$ zpE<0Ew|#nr<%PQPjcrz6(MfhJ!fC&P{^{r6y%~(}p@*!;nz`2cZ!)TP^sNZLWSjI^oB>bTNr)lXpF+_sxXufSA`40L(Af7ccYQ{ zPF-i()M%5i9V~jf{A#Q}eBc-T2rjB{TF=T`-X7!K)3DSvxpOGOy?rqvsrE1yw=v{# zCJQ(gW7G#Hp<(YgT`1SV#=;nDpQKwb@|(OFd%BOLwTx1%2492Fc68Q>_F=^P)p(ru z{YLcN0hmZZr|q#uN$y4)RJTRLe{j3o82xcyI%K)ei0Etmf=!wZsqRgIcVfMWdfDT2 z_g-0*u&r7_+kMmMdQwM45>bI%inyIO@$aF$#V`BONl?NYzGrsp0g)t3#0<1tP9u-z z1U`^5E^&P~q~EP!em1uj%5fLY5xs&I^B65D3SM!0d1G#yx}H9Q+}%LY4h4nA>F1T0 z&bR4O8igftdk{fgvRDiG*&Tyg%hfneaYpn;E15q{(+r1w3LP8M@|(IXv)5~OO}dZy zL6%%>ka9W%s(X}W?6oqOU#Oag?4HD&dUv6X%hN{=6L5$}{=;vETrA&IA$=}p zbk??p>f|v@XZL*}$d7V%;%5wx`f&Ix*~}&THqXBEUdhA=(%_?8 zOdIkXQ63O{=@BDqOKmURuz>d!FY0gZZ27^02_O%lUuhx;b7%*w1p2}LjM-1~q{Cq% z{n9ea(GvWD^=+UzSg7i4U`pkCOzaI?;h&4Ljb!(Pys(|Jp2m!{{C863EUnC<>mqGf zjK(mq6xvdB(6OC-m{aGY5%ZtZmgd_COp0GaM{@kHIiN<Wna z!HE4Pz@@S2c&Wi@6-tUk+67Fkd2@Vf9?Zg2E?W=AmWG5@L0dVCK$gg>pX?z6_hmpD-mWdl8=hK{iVv z;Ut~pD_ATtC0v!yGfl-SHA3b^-<=qZHP;)D*F|hSjH<(Eb@&pdpB@r1ZwR!LYDu@W z_RH~7jW`qDYetr|J`>@*3}JdRnRIVIcRgx{dXhE-k1kAf8e$P@U;7T(i9@xvo4(F6 z7mHXWQ-{_J2Rvn0Krljfh&5I`$ZC!tJd2h;&J^CV%RJ?($ujtidpQvT4el z`0|SW6rIZ;^Q9k0&6Ot=ZCH78M;?c3NafzRaKC;t#d!EvOI9Zl+5J4)a%c%ZQw%g_ zCwLpwtQ#5L0_~ch8aRShlbp1hwz~dsW`u*S`RxgG+MExg_Hya=z&z#z5af+q1&RBtp8lO>wc73p` z&N?|!eh8lwoxl0XL1q`+2weBsk|C^aOOPIC`n3X~XIrF6$#a+vLg-_1Pt=oh$U?y! z57uTaa+x|4=hf;b`Va+iKC@xx?^zKX>;Q-mIi&fUL!9M2I%E=1+^19MveS48Hn2ZG zO>5G@C_@o57`%L+cG^0fZIxVZP*gp2_|bPk{Kj>^9s0KD_`*vKnPj6C&M1j*sTjjf zr@An3xBfd+l2je6XYnRBv0*g)3nx)g>&*AC>3bP2rWaVwB*vHw%iBmKsuwDJm8B-j zeXl(v_%dbE)I}#|3l&w-1q!7kNeDIJ!e5fG^G+lrE{+B1x)%nh@yvTIi=y$Ipvn*} z#V|Ik><7_2FCs6uSTD|AKf2CGxZf{CQ2Ry7X;`{mKFX8f3_>!!Kj!Sj72D&a6<+*l za%yalY}(2Z6`_3WTNnDSwsI=ozQoKyPhrn_cn?R$`;>dl|!D3&zC6_1Xsv{ zg`E2Yw@S2R{?E^|`tO<0UPfd0Wb)Ow5bovDZz_vx1+i{dy{wTzF#4*C`btK?eJ55G z#hacJXQQ^;Clczh^ALK%XA0?8fL1;0+%tQ{&thBitn+(dP=7iX!T#^>m14tJjaHf| z)sRHI*L5Qf6yad>4F0|!^MNOfsO7}4_V&eKaU_BwpBp27@^QqrLi)dy_Br>iy z93;zplDDP%zl#@>jxPGnmi%*e9@ojs&+%fpv$M%59J0wvS<$YLC^aT&oldxPzE~;c zATcW&b=NI{!sbx37A1%96?T6e4S;Wyx^hdTKO)FdUNMiHNG2+$Tu;xA84sRz&2wEe zssignF2Z~>%DxXA{!3VE%k)q41fM|S_p1X8<2rg+IteM~deY9z$9XNctrqzv)4mj2 zhF-meygEXX&e2DVh8mWRVyM5vG)5gc;jHb?xBgHxAckysK8Mj#1>H!V zXP8d>YU=6?S2(9gI35LVKW!!NN~&7I;CJ`)qJc-}q;!viKeG)$8P4e(YRc9jc_C|R zlk^g}@Vw#Cr>(MXH*qiUG8LDTclSZ2uKB#1BNhA%pfFrxE>-AHJt~d!P|d;ZbZv6d zZQidOi&J^^zp*|>jGGAi{213uOqH_X+x#uPF8^Gg8ONz`aWw@VZ>{Zv4o7+ku{ldy z&g<4XnQCdMk@3<{e6@4cbPC*E<0OW<6n7?f-EXioCysIt$9{B)!n{h%bM)cD(NR(N z@Appz#6qqhYC|r%%x%TiMYM7ooBS3_JxBWJ>N}D&%}E|V-Jo1LFC4w)Ih=W3ao=5} z3tDKCKTn*099rJF^-^)#>mG&6G%1^uHKLk>Z?lIm+@2L0Zb2yzX(Q7*{+L!XzB7WX zAR|ZkSQXEh*@^2PVE0AM9j98lXl(e1Liv{xUx{GFpGVxzwTZ^*fQXzt8cNi(E!nNI zoKyI})4}?~2Au`$?R|l}$_} z#n0in23A^}!KZ?a$C9$ukx1^sHtwIFW{=!H44me8@O|a2$x=y8kHbO?fccfNhjJIX zXA(@v!wjLJ95S*`{v9c9Gp3`HMWlQh(m0WCkBlQaJtHc!%j>1wvaM2UcSIm=G@mfWXz^mDkb08%5?Yh1#%J^Vtx>8ouTAkjkA z0*gOfpk$NFIjZK^>vpZ%ZNCfQ?Yt6j<-cokMCb<-<>mLNekaIIth&9}b+Q>R%AZr) zYgScB((y~Jbf?c5x{(c8{498)lpT*3mi#8v*_DF)8xB+RXJv}D;*vXN2t7vXZ`J!p9W)DsEhoALyC zf*0G9Irvp-Qde4Lu6;W(B0##}!7-RTU_ar@wclCVJ&K%d#K~}KFyWjtqAn=eoFsH{ zokTPW{-h~|1PZoCUwxA^x_$IZa?t~>!L6<+f34Not=!0=pNK6`!a3Efi#vso#2z$O zDyPTY*R=DpFxR}NWVe#0s3O$5hFpk-fGboR*u*5~cek@PW?Gh>{c&ld&>B1ummXR* z(^hUO4RMVyAE2?@W6UuVqV@Sgv0!^TT4;z+wiUTYvdnB0!rVd?21t{+~J z))MKauTm`f7G=m8&#v-;Bjow>IU`#sEJI2K#Tj4fDzEPjch*LoLK(nhc=*5SrkHyl z@a2O+uqi@@?RP8F97#Jq?yn{A=n4-YtJ!$b#wM)L;X)bh*tu4LLE(*oZ6~NUJ=HG_ zZVTV(Oy5FApD(HB1W6|UC?YVACuy0__f{uQj@^rbw5vBcsJ(CXi_YWkZ5*T1`0v9O zuP+z{aa~IA_D|&<&knO*u+BRlM&}_+(gDbOk8|s2*-n3 zPsa%s8+1gcX8Rf05lLcn;DVNee6rvq+E$getAfw`VeBt9a23L;EvgTD^vtj0nRe1V z5zKe0VPE6E#lpxj07$#x663G;|J)0Z9q$S#(BayREL6dYvi!^B%rT_FY;Ak>@p4A+xc@&AJ4`x8rtM92sSAG~m}eOci;Lw*;Y)s&($1 z95V)Q>UwT}b=%v1eI2r&Tzc`q!9)#qmM0;IzrT)0ZS7U4k_vZ83mQ1iPCK=+kf4>G zrax?n+M2??dP5_NuF{|qEu)41tqU1s^$I!PrWW~aQH@(UrHsYKp!<>3`~Et|*0QVF zLtjLaxvt-21bKHHz@@o0+xZv*;upSpSZxwG56TRyaSdGWT$;8Y}-tY|$-zjyG@jFTZH}5}9B^V^Ci3 z9Bqy{TK03qC|=w#snz^(G6HmZH(vp_x4CMbIg81hsWI(}eiJ(?B9xPz+SWzC8hE;^ z%=`c+C7$;|F{YI~J~*o0)(U2sz1!tQ!d6GV`Hx|Dz1->|-`v2iwp|C+7lh$$*2QsA znkse1O|ONzx6XLPdtIX?EV;W0-f zr*+^ck+6UzWK`t~Q3jtcx;Z-DSS`t;CU%8t8iATHtLJvSgKwH7vX!(DqS)>QccS8? zM01UvNj=o_zOR4Q+k04p%9Zs{B70S#Yp|u~f|mno>ML4ARE1duZI^z!oWuTUD;cJ+ zbb&%+KJFZ{S{pr@AKtDw&0>%Q)cW3qHlT)24%`~bn3jfQZ6`N67K&BcTSZRmgxu#! z7#WXL9ZfzebjNoo&eI<4j=iIKS$+S(!o}agYLh+s`V2Kq?fY)v3?927QP=hUXWFB$ z)w1jW({0r=drz(O$tH4o!EYS$v264^Qx~uP{1uI7A^+L?(Ql`}@GC4cEPx!P#&YAD z<871G6EwY0nQMpvWryFTP?#}L(OvL;7&d=fE0tI60rHFM-LUmG!bW&3rS>^q4k*)a zSGLFX*bGQ*uO_Iziv2>Y3X-)h!=m2L)mjkD)a=#o)&}Ti8-m(+Gn@<#yeDE~10Xg; zO!QUsV(dBtv2sM!H*`wK#hJcIYY4y~#r+6rb>yP+d7Vm=iMvE3vh1mMNTZ*P_fgSY z|7xpXHRpo-TRHGk+QVOfLl1Czrkibw>R~4m@*)u^srm&7q z*ILOiXV`0phAc~vk~@Fx;gWB>o`N!1_O7XQtN!JVR>l2nRcHvcm0R6i)7=}E$^M6s zT61q}nful`UjypJ{)7rm!1;J~1w5d0Si&Y&EC}d3@Jw zc%M0q@ZI?AD=8$;gHMBgHh05quQEH)n@po>g@d~mx z4X&WS51meUQ7v{w=uTW)=W>mcK+A{aV#e5`&Cd!08&ONwDXHA9Ja`k|C`D3Qqq?5& z54u0nKPrisP$v`a8u{&4)6Vr5@DY88KS#V>&B_W1p?4IbNuJ;=;+g#+VpyUh6<1ms zhmQ;O+Fu!%2p;LpzoXVH}3EiB4w@M;6Nf)+KGpV(?6fOA1Xz@~vV51QvSdsbGms+v+ zd2|@DJ(X_k+F}iLcUt@1n>w?`70lIn9^AqZbBAe(qA^}DzpQ;sikue|6rwSjM`&O6M1)jN{m$c;D zn;_E6v20h;CG+t-B2x#ASyZW8p7_YLbb(@O1d)r&!$FiFG zhhJf#jy0Qvm~CzFee$Hp<=@$~)7nJbA!4E5-0f0$=rjn7a>oc6H<%CR$6u--2aZ)0 zK?}b}t*7MSFUzu)`@>+O5uY74PwRB^f@|tdGi2T);uK%cuvg?$CSR(g=+;DrFnCEZWB+rWuDK8#q3u$> z(AsA2%nkbEybT@K7OQyf(jW33hN*+2B;8-n+)&Hg@ z;_`l(Tvy>#D#b#2dVH15g@&No+z`R!bgpE5m?67z9UkZ`yWbjfAzy0cFloziBO^gxP^K5JpVG}}V2 zEN?7ZB&3faI|?_&U?<2zSRn;;4N$>siY`-2r$U=pD^f|FW6_Dv(*pWXQeBM zv@mlaP&+`3)Z0a12+MN4tFg$zvJx?l(zi#k-rwmWlG_efU9wvCXoKW-(lP&y z4q!u7)|H;PRaQ#>$>N6XLXQbpyTUsUiJnYTSpOcVv7P+t=1=!J%UX#Uk%4A`ax=;((=H397EF zkJxmXWQ#6;r8&-dvRnVeA4MZ-x|d3m>xBGh2@G0bq$`O1bgOH-a~8fpbgaHV!y86x zJxtf%vLPkiWQw5k;LXH*u-rMEWEZ+qUf4E-e@WSO#3w?{#HBMMX$X2nN!|I|K(~vy zv*VzMW6bs(WWSY)?uOGZR1o^|ZK^o+NP+ZolpIluCgR-U|V7nYMWYc zw5@lp@BzKcz9DtVuFIYA{>b$L9fP|A{Q)~qIIRN~V5X!MUkYn5ia3&?DY#h5T83o@ zSM0L%05mqz69o3}bX{xn>P>a4G+l|%g@r0X-@9S-w6fp5ee6ZXL#=Ba`q8j2&I#4W z@~*PE;mb?gns9fTIyGw6muxQuHrCp4o{jdXo;mc@RYmthAkBB!vB5}ZxFkOQZm?os zPKC*QMBXz|S^^k-wEekT@f$e2f)nL0mHx8Fkp`{;>2OFh*aCF#C4=as5GRH{WqPBY z;Ozl&2x4b3Bb(mc~c495hk5L*~mVt6?H$uRKf>JloHEBP?LxcP7xwWR5%?nIg%mbRj{MxW{CS?izEP35%!Xa>k|xIP=^3UG6NjCfR({7X;Kn^UWb>* z$o?Bao$LA|?74Wf;8ohWKG`(u5ydb}eOO&J##53DZAAq*wBdh z#Ay2@Nkh@#Bm!QOlQ9Dy4xg)_0Z-zijN{gc3=7XDkN5QEg;QrA@P9ihT__BEL_ZnW zmDH#G#nT(~tzKamyKqV&`&b}P>~*^06R%r#{n&CNL~p9JBW~7wmc3?qZ?#mX0pBr|CT77f=_S3vyvF@`o`DMr87j06IYbCHgz}sXu`~`y*aF z5rPRmJS`hs5QZuE1RW)0hmY81eC!|O1%{JNyl4juqV$f`hoc9RlvBE00XBQm;YjIg z=x~Nw>dBFz8FkgfYD_C6z9hAbU((}>I1@*%Mf%9mMrO#?(&~+jh6Y~C3l)ajQLN2Cb|y{99F?Q;5l6=4_sC z5%|lL4BpV^FCWuJvs?;GNz2%=<**5H$0o^zCAnnU5w}UIX)Ef1Mjckv=b9ehqa5D& z86bkJrkg2?3T8{f%pb-+0_$GhO&=o-oG9Bk1#iv(RY->&HJc?;A7#czvoJz9iRxI; z#@1WlahzavF3{}X-Um5QqQQ1@#v=A0@?4!Wqt+$|(c(e3!@tla#=DV*jn3b49 z?Xnm?Fp$@h{%cHt=00F{-2QI?+LPe-uO?Ycpaq4D|Hj`4J^*QV(Tx#aBI9>-59a15-QGsr zn$M?Av^p?Bn;$J5cLGeuqnX;Kum!rq3HQ#d_ohm^mLK@kSFD0bSkcP`0gFPBaHXUG z6wDu<99Mq$TVS1#WWe-QcJX&s!G0?QiK_=Av&qJxiR{r0$Rb1ALH1DFetKZy zqJUgogZOO82a~}!#JkpW)poTM==g{}Fn{~5FD8LirJuvV>75rS=24^e##0QOMM zR_z<;D8WIm;RRs+_Eks*ES*Y)awfM7pf3Yz)|qk3xBfVvwq+7_Cg}s-g}$FG%8?(L zPD^jOMN|K1`J^618FYY+(#{9?F*oA5^x*dEleL2U{GhoS zOEtG(fk6eybkmX4iF!Mu#*^;1SsxyI9XBwxXDY~BPW$N{4;!|gK8Xdbc8#v_1!<3fD*1*MMPyCsV)CV33 zJq-bfKoafS#|9CA75s|;{Ye0emi9svXd!=nZ1=YUKY{qCXyjHfkKRAPlr4ALOh7e@ z#t8UXzqP=!XMkBzd~v@1zyVCtzX-kn0yxt^rmy5c3l6VquD=xsl4v6WEBNZ(kZnl! zn1LaAhFbd+?CAIRX7z`~iI6-M621n4M+w2LV)u=_!qYnABye`5(j+i&|M|5l0EC(K zjVr#48|mpcn;sjaU{e3SvIiG;CDes->YJAv?VlJcS7= zU$q(IM%Y2GbfoMtftY`Lr>dzbc8f-s0l2C8lUb?Px-YrmtQ-(f3A4WA7u1THS6vSG z*B0-y?Zc4$gvH_jwv++Sa)2!^2Hwu8`g0%8$DI+^2+840YE36ge_raV`C^vuDwS9b z4B9-C!D>a;gRA7tp`cW>sQEnp9e%u2W7hf_Q>35X&nM>KISWp4&^dW{p>TToF+4VI zoV=!!2la@4xRz5tDlM$9JQlEvO{2BQkNWqO>OsV1XdT~b}6)dK4T z!^x`Y&hcO@R+H5hBByv_agOmho;5+)0h_YE> zx)x2F8iGjpQJ8r3&Qm^)74CdP|I}n+T*nsmeVXh$47WPb(OBS1x#Vnf@}-Z1DG3J} zHJ0Tqh%AXDRSqsm>}I#a-pxWg6PLQ~xd$zcq)8VAsKQzc~`C z%yJ|+!BllQI&;|k|px2+zn7H%1los<< zow+tPvB$Vmw3N=~@yGoWr1Q7hE2?c)^P=Ndnm#OwaTQI_lT#1o6gb3=&iu3uiMf<( zTS^<|%R+VXuJMeKqQ+FJL8=Dja^Ke*0}O5qOy%m<@^*!(#~9H1cMfi<@K?ShL5H~F z%rdGg^169ZLfswdNyQ)eTYGY2OZS1mD30hZ%8o@abi9|(&aG~5w?}VnGmPok$B=E& zas#k#<$;ZkDsM3rw>W$YI0v@R8$a$;hK^u~Omi zrEbB$PuDp7QS9 zuOZFjlK59iz@>(N=sjJIYmrsqz0s< z?M=+CvP5gnO1H5tzn!MF#oTTJ3=tZZu>PSGq7n^kdK zk>i{DbXWOhR@1#;ULJb0r_k7g8Q}RX(l-Kq#``!Qon9TW0#kqwpDm#Fp*2eE(o-}$ zpsnTPCvL#AK$mb9A!~ zhQz!MtQm^r61v$n`ik@I5ii2_*+bb5)m(AQt;q#Ax7OICPOQl8S0I5R{wrSyM9Fbn zIAy2d@@lUXkta5ZSQ%IiuK2OwL0h-0`M+S}Z*W0>YItvTnt($W93s>Em6Qfm@TBX| zU~Tvoc6@Dus@>XEFIjuuYo4o3fkgIF+!T$nSmRAU^XcMlzu3sNfFP>(7Gt19Ru9@C z!mEr!jKTOdF~<`%vrX3unmQL=J#V4Tfu>;uZ@#awvIk&Jn}Aq&vS+@9Pg%x#qeoiS zFd-4!uSZtOQ2mr@IthNH_oyZP)nY;+23$v!@}b>xiKpp#91 zvN5asDTo>A2XX4_6eoAW-LZ;*#cW6mB85Dt&_A&jlyKPC5ShUcU*m!t=V@yJXyQN* zIV6}54g^2C6}35jI+;Yn%@VfceJ@$zA#-cBeBvU1fDhf-u41SnVA6be=5+M6XoXD=TJ5c5 zWaU~@Nl`W;p5uRr%-wj0%MJEgKB?Qbb*n1_IhMwXy+25tRDa*tOI~LI*POl*i=&g@ zV|h?u9(AhoW!L3>Prwj|sQymf-cCc^i_xL!kJ-0}_2JN0DIy2Ntx-f)&R=a_$FFgT z60Q0OT>k@202nwrK{v&{g) zSlqbzW>sSD@>aGmAx4(CdDM4zV(^%hj5ruwqG_r|`tA9+f|b!+@niLYoW*iO+{}ja zpZN+Kwm`AfNU=`SS+1qNM>#JO9LOb!yIaQCSY$tWwP`LF3{q2rXMS4-#0(EK0yaYA zO!dsr_A^_wOg*nh>3zP!m>9-x3m%gJyfa^pT8-PM=o|JtE0o8+h^pNMl~J!IG8eqh z7;ZJ?@yBeh9JL_q^u^u&zS&BaUG{urp`_{@&3`BxcQd_B75K_osx*Otis+B~1d+Oy z?*y1y&zO1bmxroN?o}Bt6;hy}55b2m_nOAsny#d$G7Q|QZkCJI?Ao+mov0CC zm`3}h+koQdbL7_RyRa={CCs8l*h)~hK!3jkR+|xm#72yHeJ79O`8)g%?l>~|Qz{(K z!-xP3VlkPPuxN-NQLip#Hr9s)rq zWL0b`3GpsWeTB=-K;2VK*1|ZrK|A_dZ8FZ4CTB3s|@}L(?wzOW5$R>D| z1z5jbY#P`mIK(tCbl_6w+&nE#R9V%`WtKb`uIxFU+?Xb8b{Drqjd-$EGO#p-`LCgO%)BZT8Cxc14S$%a z5pS56NTF%*cynhy{aa2gn5+~tc%|=XYT232e74&7DQt7sxF55*@B3=ea?*~{r>OoB z0t-bd)MiEU30dbv`dxh9Tojnp=C~jPH4YV53PhAg0DgYAj^81MmIww0>r_%iQ29}j z@e%Nm{6nc3vImDbwG1{_!7TC4Ll*De{CGw7n@%oWYkBm1fY^JqGs8A17u#WhPA}RZ zvi;5v%kd(G@CoGYxbv9 z@b{PEy4Y6^$Htp>70hG^`{}E}dr3?@RE%tK;C20^rt?e(vz13vT-*&uamA^{ID$`wq!wqshKw(M|NNMV)t_(1~bJZ5}fS? z^po~W_F^?$uC2jSBXkSnywFKzEEC3zS>)E75oinDp~-v8qhhOpew&nDv|os5Z~%5V z->K(>d|GmMvJ6Ryl5^Z4$HC;8ENtlYpSlFX*>AbPKpkZNmSu@N$*F*9<5Ex>Hgu=mEA<@RpMZnY|NLS zkDVvNYI=4VYC_CCC5;<6hqPiy{g=!B(5oOlNnU!rU!p8rguMsb4EO_mA;Ur<%3vs z75{`N@v*p%?dMcG&cTp|9NRGygA*k?x zbTTj6zg|J&&;v2@+qTSvXfEwFJztV-Jdt(9TKSn_MZKF`j_6|2q6v9r*Q%C#HBZ5z>m2x!})A}Bf#!NrgzdetrW%80}o>%j7WtQ3tObqcZ)vXHvQUWaw)9W9OUV~6& z`uR!=mal!tttk9(SyV%LtsPYKNLy=E8dl>~Eq`GB5k8>=NL(Wd=~4_^!$yTQADaW0^Cpi`!wOu@vH_V#%OB&wH+ZhXq{uSG@-yF zfk3X(ZPH7s@+y+(j@QrCC!WJ=yYvVVkDQ9cIonC{;4&^-~rg}G#TnU} zvuw(0c-Kn1?Ox{o{(Mqr`F?Q1!SnIbj5JhhH!-1YkOI}RUXKfPzV(kY6O%vOHfAyT zHBY(G4FIbuR&r!ZK9xE2B6zZ;cr9J#**6yuB>f4u--5!?g*Y$(kJFx!Ww=Cg^kM7# z?d+3s#w>orV$c5Q2>-qZg;2}?9mYyScYzXRv?^~Ga&Y8CC>{b$2|5C z5XJO4P@%By%%S>id;R)kBreqg_C1Mw2K@Ei$=2Mm9FW2m3$2NMCV`p%ilY1i76=$$ zxgek6%6VsC0oo4>phi}+R7zVRWD5bX^KiZ-h{vU5x+PsMek-uPAr$TNlWtwF{Odxp z!|UT=tk9h0HQ+CadFY&FEnK{nRo&5T&(UWtuDrNPoN>B3>$9lGd(C5jzKSrr(4B(Y z3D|c-n)^S$sZ}!$fkT4zmHJ05V!pq$0Yc_}(uY9*Q7MSvzp@UEPXyVg_y+&h_(}oo zO=>+0{6*JDkN-$>03?WSKM8s@%m+gd>V5SATI3}Jf(bRbptAUK(h!}Juo;zxw!AIS zC)pauq9)djLH)NR=pSs2kH9)6q9)7@pyp7!PzoP)UScOte7GQNiaXT*!q$+Wv-+k# zM{lin9AM(!UPc+ttFNC)$MT2ylUDhAHdKH_9ZnFLWX~HKrpY@U6+7}qLIbb0NB4P> z00`~B^$G)2i2(YWiMjc|HkIE1D7=DGQGfXV%357Zw==_L11tnBE%OrVL!GXb^-Xvi zUi0nf3brVHUFC39tmdAh}BnAo+g%Z@k*| z6RA#IeoXgYSJV}#rC<_m_$&YSZ!Jh-2K)KQw}bVnX!5+*vu?%DfxmrC7rdApN83Pxid z?J0EO;r@LwSA~EMDYQR?{40+L*!v80Ue^7%uar;0*}{W~cl>fGJ*v`lnY3}kTW5Px zmZ4xsSjK$lTgg*RB9Xt9J;hE_hVm|nX!jHDB!ASm=10Tdc4RPr8Tdc=LPTnS@BCFz z9ijS{C%)yRB*-Lbmu?C8dN)j5j_VvK51!#+g396HQV5{r3x(hL`3*F;On$((3_5;{O)ltyfhIC7Ay5L_i%~ z9+~8+ZWy`wCji??V7rpfbG{n=+0m1K6%kx*v1r0&R~c{9c=^(OV<(W7o?NE64Ir8D zIqdNPk}1Ic?B$N1gIwO@q9^&swi4zP4h<0iwFmNU>xRGRZVH86#63zRml(L#^IP$#laHh@DCJFEtq zn53njv(<22!dR{CKh}V9o6vz#-zwHBrZ!ZGuz<5H%vsA z*9D#aM2`@P_;-s%#|Lykr~^CWujU}a39A9Kb9OoI*hRTDddQ0az|fs)fJZZ1s@JVP zxY9XStRrPT|2pg_oHYPn0&ruBdF(IbA6?RNlFFVEvgy*h9~1-Ju*0Ctb2SzJy-!1J4I=Fosxpb8#I z#a}xG{vHLYEE0}!{PutKu;^rPl`yAMp(XjNIa^94#g2uMsxrZ0;23;>#GPWoCuL;b z3Ou^Fb{R*VsJK{!%oHh6QnFe;)EQoN?OtdV0Q@xXNw3aCLx(Ud5-^$xEP?J3^-o7= z_-L>cBDH?{g8v#YgoJ@XnAMXh|J8D7sMCRj2p@@<dZ%!J={0}JV!4dA z$r|@u)oADPf|#$#4ggI zrqfE9ip0Lg)Ut>q3O4nYDL<9lEJMJzB$s!!=dFhZZ6MC=|sT&xzF zYVAVYpv{PXck>D`K4ON1IdDIK$Tr50Myn1E^Pb$}De}t#AQw|s)Ra=c zkV!;EyBxc$<;JqEmW9yREQNrKWa4-XsvDQC)zv3%CkRu(#pWOVXQ=*Xgn$$5PGli^hR&LcCRA7o8kJGk@yIx10`%s)vkcfe=#|H*rlC{X>y;5 zVOd;m!3i{Cr<%tV47)&y=B-k6mKPw~Uce2~(36K58W}q3)r7E&y&>oSch!^xzPn>A zw>`?ghn9b9i1DPuBDhQ+5dKTU(f|3x|1?AYGmrlo`up9eZT(&j{b9R literal 0 HcmV?d00001 diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/amplicon.bed b/primerschemes/norovirus-gii/800/v1.0.0/work/amplicon.bed new file mode 100644 index 0000000..83a9c8f --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/amplicon.bed @@ -0,0 +1,9 @@ +NC_044932.1 60 931 17a7cb79_0 1 +NC_044932.1 845 1757 17a7cb79_1 2 +NC_044932.1 1345 2248 17a7cb79_2 1 +NC_044932.1 2157 3056 17a7cb79_3 2 +NC_044932.1 2929 3837 17a7cb79_4 1 +NC_044932.1 3737 4595 17a7cb79_5 2 +NC_044932.1 4330 5096 17a7cb79_6 1 +NC_044932.1 4936 5833 17a7cb79_7 2 +NC_044932.1 5688 6584 17a7cb79_8 1 \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/config.json b/primerschemes/norovirus-gii/800/v1.0.0/work/config.json new file mode 100644 index 0000000..ba6a541 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/config.json @@ -0,0 +1,47 @@ +{ + "algorithmversion": "primaldigest:1.2.2", + "amplicon.bed.md5": "32910955bb20d5604618a71444098f45", + "amplicon_size_max": 880, + "amplicon_size_min": 720, + "backtrack": false, + "bedfile": false, + "circular": false, + "dimerscore": -26, + "disable_progress_bar": false, + "dna_conc": 15.0, + "dntp_conc": 0.8, + "dv_conc": 2.0, + "editdist_end3p": 6, + "editdist_max": 1, + "force": false, + "mapping": "first", + "min_overlap": 20, + "minbasefreq": 0.02, + "mismatch_fuzzy": true, + "mismatch_kmersize": 20, + "mismatch_product_size": 880, + "msa_data": { + "0": { + "msa_checksum": "4cfb9990d0560405c1e3b7eed45dce0a", + "msa_chromname": "NC_044932.1", + "msa_name": "gii.align.mod", + "msa_path": "work/gii.align.mod.fasta", + "msa_uuid": "17a7cb79" + } + }, + "mv_conc": 100.0, + "n_cores": 8, + "npools": 2, + "plot": true, + "primer.bed.md5": "3191ec8a80f14a5688d561fe2cf77e34", + "primer_gc_max": 55, + "primer_gc_min": 30, + "primer_hairpin_th_max": 47.0, + "primer_homopolymer_max": 5, + "primer_size_max": 36, + "primer_size_min": 18, + "primer_tm_max": 62.5, + "primer_tm_min": 59.5, + "reducekmers": false, + "reference.fasta.md5": "88cba0415494cd9837e2523051cb636f" +} \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/file.log b/primerschemes/norovirus-gii/800/v1.0.0/work/file.log new file mode 100644 index 0000000..7030667 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/file.log @@ -0,0 +1,16 @@ +2023-11-03 at 09:50:40 | INFO | Creating the Mismatch Database +2023-11-03 at 09:51:38 | INFO | Created: /Users/kentcg/schemes/Norovirus/gii/gii-800-0.02-v2/work/mismatch.db +2023-11-03 at 09:51:40 | WARNING | WARNING: Having a '/' in the chromname NC_044932.1/1-7525 will cause issues with figure generation bedfile output. Parsing chromname NC_044932.1/1-7525 -> NC_044932.1 +2023-11-03 at 09:51:40 | INFO | Read in MSA: gii.align.mod seqs:2832 cols:8522 +2023-11-03 at 10:04:07 | INFO | gii.align.mod: digested to 632 FKmers and 558 RKmers +2023-11-03 at 10:04:08 | INFO | gii.align.mod: Generated 6587 possible amplicons +2023-11-03 at 10:04:08 | INFO | Added first amplicon for gii.align.mod: 60 931 1 +2023-11-03 at 10:04:08 | INFO | Added overlapping amplicon for gii.align.mod: 845 1757 2 +2023-11-03 at 10:04:08 | INFO | Added overlapping amplicon for gii.align.mod: 1345 2248 1 +2023-11-03 at 10:04:08 | INFO | Added overlapping amplicon for gii.align.mod: 2157 3056 2 +2023-11-03 at 10:04:08 | INFO | Added overlapping amplicon for gii.align.mod: 2929 3837 1 +2023-11-03 at 10:04:09 | INFO | Added overlapping amplicon for gii.align.mod: 3737 4595 2 +2023-11-03 at 10:04:09 | INFO | Added overlapping amplicon for gii.align.mod: 4330 5096 1 +2023-11-03 at 10:04:09 | INFO | Added overlapping amplicon for gii.align.mod: 4936 5833 2 +2023-11-03 at 10:04:09 | INFO | Added overlapping amplicon for gii.align.mod: 5688 6584 1 +2023-11-03 at 10:04:09 | INFO | Writting output files diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod.fasta b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod.fasta new file mode 100644 index 0000000..8be43a1 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod.fasta @@ -0,0 +1,345504 @@ +>NC_044932.1/1-7525 |Norovirus GII GII.NA2[PNA2], complete sequence +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcacaaccagctcaaacagt +gaaattcac----aacaaagatgttagtaacacacaaaac------------------atctttgccaacat +gactgttggcataaagaggg----ctctgggggcgaggccaaaacaacctccccccaagcccccttccacaa +agaaggaggacaaa-----------------------------------------------accacccttcc +tccaatacccc--------------------ccccaccccccaatgg------tgaggacattgtcatcacg +tacaacaagc----------aaga---tgacaaggtcagtggagttcccatcgtttccactgttgagacatc +ccctctgcatgacaccgcatacagtgtccctcccctggatcaaagggaaaaggttgatgcaaaggagcccct +aacaggttcaatactcgagatgtgggatggtgagatctaccactacggcctctatgtggagaagggtttggt +cctcggcgtgcacaagccaccatccgccttgagcctggcacgcatagagttaacccccctctctctctactg +gaggacagtctatacaccac---cctacctagtggctccagacaccctcaagaaactccacggggaatcatt +cccctacacggcttttgacaacaactgctacaccttttgctgttgggtcttagacctaaacgactcatggct +taa---taggaaatgtgtatcaaggactactggcttctacagaccctaccaggattggaatagaaaacccct +accaaccatggatgagagtaaactcaaaaaggtggccaatgtgtttctgtgtggtctatccagcttattcac +caggcctattaaggacctcgtaggtagactcaaaccattgaacatcctcaacattgtcaccaactgtgattg +gactttccccggtgttgtagaagctctcatcctactggcagaactcttt---ggcattttctggaccccacc +ggacatatccgctttcgtagcctccctgttgggcgactacgagatgcaagggcctgaggacattgcaaccga +gatcgtgccagttgttctcggtggtattggcatggtccttggtttcaccaaagagaggattggccgactact +gagttcagctgcatcatcactcagggcatgcaaggagattggcaactacgggatagaggtggtcaaattggt +gatgaaatggttctttcccaccaaaaatgaagtgaatgaaatggagatggttagggcgatagaagatgcggt +acttgacttcgaggcaatagaaaacaaccatatgacagccctgctcaaagacaagaacagcctagccacttt +cctcagagcactagacatggaggaggagaaagcgcggaaattgtcaaccaaatccgcgtcaccagacataat +cggtaccataaacgcccttctagccaggctcgccgccgctagatccctagtccacagggccaaggaagagat +gtcatccaggatgcgtcctgttgtcattatgatttctggccgacccggaatagggaagacacaccttgcacg +cgacctggctaagaagatggcagcaaccctctcaggtgaccagagagtgggccttgtaccaagaaacggtgt +cgatcactgggatgcatacaaaggagagagaatcgtgctctgggatgattatggcatgagcaaccccgtgtc +tgatgccctacggctccaagaacttgccgacacatgccccctaacacttaattgtgacaggatagagaacaa +agggaaagtctttgatagtgataccataatcataacaaccaatctgtcaaacccagctccacttgattatgt +aaactttgaagcttg-ctcccgccgcattgacttcctcgtctatgcggattcccctgcagttgacaaagcaa +agagggatttccctggtcaaccagacatgtggaaggatgcattcaaatcagacttctcccacataaaattac +aattggcaccacaaggaggtttcgacaaaaatggcaacaccccacatggtaaaggagtcatgaagaccctaa +ccacacactctctcatagccagggctactggtttgttgcatgagagactggatgaatttgatctacaaggtc +cagaattgcccatatacaattttgaccagaacaaggtggcttcctttaggaagctggctgcagacaacaagt +atggtctcatggaaaccataaaagcaggtaacaagttgaaggaagtcaagacactggatcaattcaaagagg +ccgtgagggacatacgcataaagccttgcagaataatctacaattccacagcttatgacctggagtctaacg +gctcagggaaggtcactgtcaagaaagtaggagaccaaaaagtccaagccaacaatgagctctactctgccc +tcaacaacctgcgtagagccaggattagatactatgtcaagtgtttccaagaaatgatctactcactcctcc +aaatagccggtgcggcttttgtcacatcgagaatgacacaaaggatga------atgttggcaagctgtgga +ccaagccgga------------gagaac--------tatgaaggcccccacggagccccctgctcctcca-- +--------attgatg---attggaccataaacccagttgacacaattccggaaggtaagaaaggcaagaaca +aaagtggtagagggaagaaacacactgccttctccagcaaaggtctcagtgatgaggagtacgatgaataca +agaggatcagagaggaacgtcaaggaaggtactccatagaagaatacttgcaggacagagaccgctat---t +atgaagaattggctatagccaaagcaacagaggaaaatttctgtgaagaggaagaagtcaaaataaggcaaa +ggatcttcaggccaaccaagaaacaacgcagggaagaaagagccaccctgggactggtcacaggcagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaagggaaagctgtgggctgatgatgaccgtagcgttaact +acaatgaaaggatagattttgaagccccccctagtctatggtctagaatagttaattttggttcaggttggg +gtttctgggtctctt-ccaacctcttcatcacctccacacatgttgttccaccaggcatgacggaggctttt +ggagtcccaacaagccaaatccaaattcacaggagtggggaattttgcaagatgagattccccaaagccatc +agacctgatgtctctggaatgattcttgaggaaggcgcacccgaagggacggtggtgaccatactgatcaag +agaaccactggagagctcatgccactggcagcccgtatgggcacccatgccaccatgaagatacaggggagg +atgattgggggccaaatggggatgcttctcacagggtccaatgccaaaaatatggaccttggtaccgtcccc +ggagattgtggctgtccttatgtctacaaaaggggtaatgattgggttgtcattggggtgcacaccgccgct +gcaaggggtggcaacacggtgatatgtgcaactcagggaccagatggagaagccacacttgagggaggagac +aatcacggtacttactgtggcgcaccaatcatgggaccaggaaatgccccaaaactcagcaccaaaaccaaa +ttctggagatcttccaatgccccacttccccctggcacatatgaacctgcctatcttggtggtagagacccc +agggttaaaggtggcccatcactacaacaagtcatgagagaccaactcaaacccttcaccgctccccgtggg +aagccgccaaggccggcagttctagaggccgctaaggagaccatctgtagcgtacttgagcaaaccatagaa +ccaccccaaaagtggtcctatgcgcaagcctgtgcttccctggacaagacaacatcaagtggctacccccac +cacaagaagaagaatgataactggaatggagagtctttcactggcgtcctggctgaccaggcatcaaaagca +aatctcatgtttgagcaagggaaacacatgcagcctgtgtatacagctgcacttaaggatgaacttgtcaag +accagtaagatctatgaaaccatcaagaaaaggctcttgtggggttctgacctgggcacgatgattcgttgt +gcaagatcatttgggggtctcatggatgagatgaaggctaactgtgtgagattgcccatcagggtcgggatg +aacatgaatgaagatggacctataatctttgagaaacatgcaaaatatagatatcattatgatgctgattat +t-ccaggtgggactcaacccaacagagacacatactgggtgttgcacttgacatcatgg-ttaaattctcag +ctgaaccagaact-atcacaagtggtgtctgaggatcttctgtcacccagtgtcgtggatgttggtgacttt +aagatcacaataaacgagggccttccctcaggtgtcccatgcacatctcaatggaactcaattgctcattgg +cttctaacactgtgtgccatgtcggaagtctctggactctcccccgacgtggtacaatcaaattcatgtttc +tccttctatggggatgatgagatagtcagcacagacataaagttggacccacaaaaactgacagacaaactg +agagagtatgggctcattccaacccgacctgataaaacagaggggccactcataattagagagagcttagag +ggtctgacgttcctcaggagagatatatgtagggacccagtcggctggtatggtaagcttgaccagtcctca +atcatgagacaactgtattggaccaaaggacccaaccatgaggatcccaatgaaacaatgattccacattct +caaagaccaatacaattaatgtcccttctcggtgaggctgccctgcatggaccaacattttacaagaaagtt +agcaaattggtaatcactgaactcaaagaaggtggaatggatttttacgtgcccagacaagaaccaatgtac +aggtggatgagattctccgacttgagcacgtgggagggtgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgccaacctcgttccagaggccaactcaga +ggcattggcattggaaccggtggcaggtggggctattgccgcacctctcactggtcaaacaaatataattga +cccctggattatgaaaaactttgtgcaggcacctaatggtgaattcacaatatccccaagaaattcccctgg +agaaattttgttaaaccttgagttaggaccagaaattaatccttttcttgcccacttatctaggatgtataa +tgggtttgctgggggagtggaggtacaggtgctcatggctggcaatgcattcactgc---aggaaaggtcat +atttgcggctgtgccgcctcatttcccagtagaaaacattagtcccccacagataactatgttcccccacat +aatagttgatgttaggactcttgaaccaatttttatccctgtcccagatgtgagaaataatttctttcatta +caatcaaatgaatgat---ccaaagatgaggttaattgctatgctgtacacccccttaagatcaaatggttc +ttctgatgatgttttcactgtgtcttgtagagttctcaccagacccacccctgattttgagttcaattattt +ggtaccacccactgtcgagtcaaggacaaaacccttcagtgtgcccatcctaacaattggagagatgacaaa +ttctagg---ttcccattacctattgacatgctgtacaccagcccgactgacagtttggtcgtccaacctca +aaatggcaggtgcacaattgaaggtgaattgcaaggtacaactcaattggtgactccaaacatttgttccct +tcgag-----------------------------------------gcgcaatcaccg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgaca----------------------------------accacaaa----------------- +----------tggcacatgacagtcacgagccctaatggtgccgcctttgacccaacagaggatgtgcctgc +ccccctgggcactccagatttcatagctgacatatatggggttctctcccaga---gaaatagatc---cat +cgaatct-----ggccagagtggtcctgcaaat--------aga-----------tctcatgaggctgttgt +ctccacacggagtcctaaatttacccctaaattaggttcagtaatgattgcca---------cttggaacac +caatgatat---tga---acttgagcccacca---------------------------aattcacaccta- +--------taggt------cttgagaatcccg------------gcccctttcaacaatggcggctaccaaa +ttactcaggagcc-ctaaca------ctcaacatgggacttgcatcatctgtattcccaacataccctggtg +aacaaattcttttcttccgttcatacattcccc------tcaaaggtggctt------tggaa--------- +--acacagccatagattgccttgtaccacaggaatgggtccagcacttctatcaggaatcagcccctgcaca +atcagatgtggcactacttaggtatgtgaaccctgagacaggacgtgtcctgtttgaggccaaactgcacag +acaaggtttccttacagttgctagatcaggtgaaagtcccatcaatgttcctgccaacggttatttcagatt +tgactcttgggttaaccaattctactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcttagcaggattggctggtgacatagtcacaaatagtgta +ggttctttagttaatgcagg---agctagtgcaatcaaccagaaaattgattttgaaaataataaatac--- +------------------------------cttcaaggagaatcttttaaacatgataaagaaatgctgaat +gcacaaattgaggctacaaagaaattgcagatggatatgataaacatcaaacaaggagttctttcagctggg +gggttctcacccactgatgcggctcgtggagccatcaacgctcctatgacaaaggttctggattggaatggg +actagatactgggcacccaatgctcctgtaacaacatcactgtctggtggcttcactggg------------ +ca-----------ggccgtacacaggcccacaccaaat---------------------------------t +ttggcag----------------caatcaaatcccaaagacaatg--------------------------- +-------------------------------------------------tcc---------------agtag +gggaacat-----------ctgtg------------agatcaaattcaactcaattgaccagt--------- +----------ctgggt-------tcccaatc------ttctggttcctcccgaagcagtgtgactaccgtga +gtagctcat------tgc--------------------------------ctt------------------c +aaccaa---------------------------------------caggactagagagtgggtgaaccaaca +aaatctcaatttggaacctcacctac---ctggatcactgaggacagcctttgtcactccaccatcgagcac +cgcttcc---agct------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattattta---- +atta-g-aac-taat------------------------------------ttcaatt------tggactaa +t------------tcgg---aaaatctttt------------------------------------------ +------------------------------------------------------------------------ +- +>NC_044045.1/1-7551 |Norovirus GII/Hu/JP/2007/GII.P15_GII.15/Sapporo/HK299, complete genome +----gtgaatgaggat---ggcgtcgagt-gacgtcgctactgcctttggcagccag---aaagctaccaat +g------ac----agctataacacaccccctcccaacaaggaggaggc------tagtgtgctcaccaacgt +taaagttggttttaagaaga----tcctcggggccgttcccaaggcttcg-------------agacagcat +ggcaacac----------------acaaaaaccgtcgaccgttgagatcgatggtgtggccatgcgtgtgcc +ctc-----------------------------tccccccccaaacgg------cgaggac------gcggtt +cactttgtga----------aggaaacggagaccatcaagggattgccagatttgtccaccgt---ggaaaa +cgaatctgaacactccccatacacagtcccaccactgagtgagagggaacacaggccagcaacagaacccct +gcctggcactatacttgaaatgtgggatggtgagttctaccactactccatatatgtggacaatggcaaggc +ccttggtgtgcacaaaccaccagcagcaatcagccttgcaacgatagatttaacacctatatcgttgtattg +gagaccggtgtatacaccgc---cgtaccttgtccacccagagacactcaaagggctggctggtgaaaagtt +tccctatacagctttcaacaacaactgctacaacttctgttgctgggttctggacctcaatgattcatggtt +gaa---tcggaggtccataaacaggacaactggatttttcaaaccctaccaagcctggaacaggaagcccct +cccaactgtggatgatggtaagatcaagaaggttgcgaatgcagttctgtgcgccctaggatcacttttctc +aaaacccatcaaggacctccttgggaagctaaaaccccttaacctcctaaatctgctcgcatcatgtgactg +gacctttgctggtgtagtagaaacagttattcttgcagcagagctcttc---aatgtcttttggaccccccc +tgatgtctctaacttcattgcctccataattggtgactttgagatgcaaggaccagaaaacctcgctgtgga +gcttgtccccgttatcatgggaggcattggcatggtgttaggattcacagctgagaagatagggcgcatgtt +gtcatctgcagcatccactcttagagcttgtaaggatcttggtaattacgccctggacattctaaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaactctaagagccattgaggatgccgt +ccttgacatggaggcaattggcaacaaccatctcacaacattgctcaaagacaaggacagcctaaacgccta +catgaagaccttagacatggaggaggaaaaggccaggaaactctcaaccaaatcatcatcacccgacattgt +tggcaccatcaacgcaatccttgcccgcatcgccgcagcaagatcactcctgcataaagccaaagaggagat +gttcagtcgggcgaggcctgttgtcgtaatggtctccgggagaccagggatcgggaagacttacctggctag +acaacttgctaagtcaatagcaagcagcatgagtggtgatcagagggtaggacttgtcccccgcaatggtgt +tgaccattgggacgcctataggggtgagagagtcgtcctgtgggatgactatggtatgggaaacacaattaa +agacgccctgactctacaggagttggcagacacctgcccagtcaccctcaattgtgacaggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacaaccaatcttgtcaaccccgcccccctcgattacgt +caactttgaggcttg-ctgtagacgaattgacttccttgtctatgccgaggcaccagacattgagaaagtca +aaaaggatttccctgggcaaccagacatgtggcgtgaccatttcaaagctgattcgtcacatataaagttgt +cattagccccacagggtggtttcgacaaaaacggaaacacccctcatgggaagggcaccatgaaaaccctca +cgctgcattcactcactgcacgtgtgatgggcttagtgtgtgagagaaaggacgagttccaattgcaggggg +atgaactgcaggtttacaactttgacacaaacaaagtctctgcatttagaaaattggcagctgacaacaagt +atagttttgtggagacaatgaaagttggtgcggtcctcaagaatgtgcgaaccctggaggacctaaaatctg +ccctcaaaggagtcaagttcaaggagtgtgaaataatctacaaaggggctaagtacagggtcgcctcggatg +gctgtggcagtgtctcggtctccaagatcaaggatgttgcatcacagacagccaatgaagtgcatacagcgc +tcctgagactgaggcaggcccgggccagatattacatcagctgcttccaagatcttatctatacactgatcc +aggttgctggagcctcatttgtggtgc---------------acagga------tctcaaagagattctcct +gggaccgttggattaaacccagtgagag----------ccctcaagaggaagaacaacctag-----cagtg +aggaggccacaggaa---gatgggaaattgagccaaaggacacagaccctgaaggtaagaagggtaaaaaca +agaagggaagggggaggaaacacacagccttctctagcaagggtcttagtgatgaagagtacgatgagttca +agagaatcagagaggagaagaacggcaagtactctatagaagaatacctccaggaccgtgatagattt---t +atgaggaagtggcagtcgcaagggccacggaagaagacttctgtgaagaagaggtggcaaaaattagacaga +gaattttcagacccacaaagaaacagaggaaggaggaacggggcgtccttggactagtcaccggttcggaaa +tcaggaagagaagaccagatgacttccaacccaaaggtaatttgtgggctgatgacaccaggagcgtggact +acaacgagaagctggaatttgaagcccctccaagtgtgtggtcacgcatcgtaccccttggtactggttggg +gtttctgggtctcct-ccaacctcctcatctctctggaacgagtcctgccaaaaggagtgagtgagctgttc +ggagttgacatcaaacaaattcagatacacaagtcaggtgagttttgcaggttcaggtttccaagacctatc +agaccagatgtcacaggcctcatccttgaagaaggagcccctgaaggcacggtgtgttctatcctcgtcaaa +agaccgactggagagatgataccactcgcagtgaggatgggcacccacgcttccatgaaaattcagggcaga +acagttggtggtcaaatgggcatgttgctcacaggggcaaatgccaaaaacatggacctgggcacgaaccct +ggtgactgtggctgcccgtacatttttaaaaggggcaatgacattgtggtagctggggttcacaccgcagct +gcaaggggtggcaacactgtgatctgtgccacgcagggggctgacggagaggccgttcttgaaggaggagag +gacaaaggaacatactgtggtgccccaatacttggacttgggaaggcccctaagctctgcactaaaacaaag +ttctggcgttcctcacctgatgcactacccccgggaacgtatgaaccagcctatctaggtggaaaagaccca +agagttgagaagggcccatcactccagcaggttatgagagaacaacttaaacccttcaccgaacccagagga +aaaccgccaaagcccagcgttctcgatgaggcaaagaaaactgtgatgaatgtgttggagcaaaccataaac +cctgccaaaccctggtcatactcacaagcatgtgcctcacttgacaaaacgacttcaagtggtagcccacac +cacctaaggaagaatgatcactggaatggtgagtctttcaccggccctttagccgaccaagcttcaaaggca +aacttaatgtatgaacaggcaaaacacgtgagccccgtttacaccgcagccctcaaagatgaactagtcaag +actgacaagatttataataagataaagaagaggttgctatggggttctgacctgggtaccatggtcaggtgt +gccagagcctttggtgggttaatggacagcatgaaagagagttgtgtgatgttgccctgcagagttggaatg +aatatgaatgaggatgggccaatcatttttgacaaacatgcaaaatataaataccactatgatgcagactac +t-ccagatgggactccacgcagcaaagatgcatcttgtctgctgccatggaggttatgg-tgaaattctcag +ctgaaccggaatt-ggcacaggtggtggctgaagacctactcgccccgagccaactcgacgtgggcgatttt +gtggtgtcagttcaggaaggccttccttcaggtgtcccatgtacctcccagtggaactctatagcacactgg +atcattacccttagtgcaatgtcagaagtctctggtctctccccagatgtgatccaagcccactcatgcttc +tctttttatggtgatgatgagatagttagcacagatattaatctggacccagcaaaattaaccttgaaactt +agggaatatggattggtccccaccagaccagacaaaactgagggcccactagtcattacagagaacctccac +gggttgaccttcctacgcaggcacatcacacgagaccctgctggatggtttggtaagttagaccaggattca +attttgagacagctctattggaccagaggacccaaccatgagaatccctatgagagcatggttccgcactca +cagcgcgcgacccagctaatggcgttgttgggtgaggcatcgctacacggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagatcaaaagtggtggtctggaattttacgtgcccagacaggaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatctggctcccgacggtgtgaatgag +gatggcgtcgagtgacgcgcccgtttctggcaccgatggtgcggcaggactcgttccagagagtcaacaaga +agtcttgcctttagagcccgtcgcgggagtccagctggctgctcccgttgcagggcaaagtaacataattga +cccctggattagaatgaattttgtgcaagccccggccggtgagttcactgtgtcccctcggaacgcaccggg +tgaggtacttattgatttagaattaggaccagaattaaacccctatctcaaccaccttgcaagaatgtataa +tgggtatgtaggaggaatggaggtggaagttgttcttgccgggaatgcgttcacggc---aggtaagatctt +gtttgcagctgtgccccccagcttcccaacccatggtatctctgcagcacaggctactatgctaccccatgt +gattgtggatgtcaggcagttggagcctgttcggctccccctccctgacgtcaggaatgtgatgtttcactt +ctgtcaagagaacaaggagccgcgtatgagaattgtggcaatattgtacacccctctccgtgccaacggagc +tggtgatgatgttttcaccgtctcatgtcgtgtgctaacaagaccctcaccagattttgattttattttctt +ggtccccccctctgtagagagtaagttgaaacagtttaccctcccaaacctgcagccaaatgagatgaccaa +ttcaaga---tttcccacaggtatcacacagctttataccagtccaaacaccaatttggttgtccagttcca +aaatggcaggtgcctacttgatggtacacttcttggtactacccctgtcagagctgctgacatctgcagttt +tagag-----------------------------------------gggtcacatcaactgaa--------- +----------------------------gt----------------------------agatgcaactg--- +--acagccccagg--------gtggcagggt----------------cacataga----------------- +----------attatggtacagcttagggagccagatggagaggagttttcacccacaggtcccaaccctgc +ccctgttggcaccccagactttcaagcagccatatttggcaccctcagtcaaa---gaaacactggtgga-- +------------gctggg---cagaattctaac--------aga-----------gcccacttcgcatattt +ctacacaagaaaccccacctttgcaccaggcatagggactgttgtatt---tt---------cttttgacac +cactgattt---tcaaaatcgtcaacctacca---------------------------aattttcccctt- +--------ctggtgtgtttgatgatgattctt---------ctgaacctttcaatcagttttccctgccata +ttataatggatca-ctcggtgcagtggacgctggaaaactggctccacctgtggcacccaattatccaggtg +agcagattctttatttcagagggagtgtacctt------tcaaaggtggtta------tggag--------- +--aaggtgagattgacagtttgcttccccaggaatggattacccatttctatgcagagcaggcccccacaca +aggtgacgcagccctgctgcgctactacaaccctgacactggtagagtcctctttgagtgcaaactccatcg +tgaaggattcatcacaatcaactacacgggatccaatgctcttgctgtgccggtcaatggagtcttcaggtt +tgagggctgggttaacaaattctacacactgacccccatgggaaatggcaatggccgcaggggtagaagaag +ggagt---------tataatggctggagctttctttgcaggtcttgcttctgatgttcttggcagcggttta +tcttctcttattggtgccgg---tgccaatgctataaaccagaaagttgaatatgattacaataggcat--- +------------------------------ttgcaatcagcttctttccaacatgataaggacatgctcagt +tcacaggtggaagccacaaaacacctgcagagggaaatgatggccatcaaggaaggcatgctgctcaagggc +gggttttcccccactgatgcagcaaggggggctgtcaacgctcctatgacacaaatcttggactggaatggc +accagatattgggccccaggtgcaatgaaaaccacggcctactcaggtcgttttgtcagccaatccactcac +ag-----------gcccattcccaatgttg------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------tgcacaagagtgagggatcc------------------------------------- +--------------------------acaca---ccaaactgggtcatcca-------ccgg--------at +ctatctc----t---tctcttt----------ccacatcatccacccgtgttc---------catcatccac +atcctc-------------------atcta-----gtagtacttctagaacaagagactgggtgtctgaaca +a---caaagactcagccctttcatga---gaggttctcttcaaactgcttatgtaactcctccctcaagctc +tgcctct---tcag------------------------------taagct---ctgtttctacagtcccaca +ttatgttttaga-ttcatggaccccttctt------------ttaacactaagcatttacccctgtttgccc +acgttaagaaaaggggacaatctca--------agtttaa--tctaccactcatggttttattg-------- +-------att-tgttttg--taattagtgaaat-gttgattc------tt-ttctaatt---c--------- +--------------------ggcattt--------------------------------------------- +------------------------------------------------------------------------ +- +>NC_044046.1/1-7543 |Norovirus GII/Hu/JP/2011/GII/Yuzawa/Gira2HS, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctattgttgccgttgcaggc------------aaaaac +c------ac----aacgacaatgaaaatcaaaacaaagacg---------------gcatattgtcaaacat +ggccgtcacttttaaaaagg----ctttgggggcgagacctaaaaggcccccccctaatacaca-------- +-----------------------gccactgagaccaaccaccccagagctcgtg-------gcacagatacc +gcc-----------------------------tccaccgcccaacgg------agaggatgaaactactgtt +aagtatgagg----------tgga---caaagggatcactgggctgccagagctgacaacagtaacacagcc +agcagagaataacacggcatttagtgtcccccccctcagtcagagggagaaaaacgatgccaaagaacccct +tcctggtaccatactagagatgtgggatggggaaatataccattatgggttgtatgttgagaaagggttggt +ccttggagttcacaaaccgcccgcagcaataagtatggccaaggtcgagctgaccccattgtctctgtattg +gaggccggtctacactccgc---agtacttggtgtcacctgaaacactgcggaagctgagtggagagtcatt +cccatatatagcttttgacaacaattgctacaccttttgctgttgggtgcttgatctaaatgactcgtggct +gag---cagaaggatgatacaacgaactactgggtttttcagaccgtatcaggactggaacaggaaaccttt +gcccacaatggatgactcaaaaataaagaaagtggccaacatgtttttgtgtagcttatcaaccctgttcac +ccgtcctataaaagatatattagggaaggtaaagccactcaacatcttgaacatacttgcaacctgtgattg +gacattccctggcatagtagaatccctgatacttcttgctgaactcttt---ggtctttactggacaccccc +agatgtgtctgcaatgatcgctcccttgcttggtgaatacgagctacagggcccagaagacatcgctgtaga +gctcgtccccgtggtgatgggagggatcggattggtgttaggtttcaccagagagaaaatagggaaaatgct +ttcatcagcagcatcaacattgagggcttgcaaagatcttggggcatatggcttggaaatcctgaaattagt +gatgaagtggttctttccaaagaaggatgaagctaatgagctggccatggtcagggcgatagaggatgcagt +gctagacctggaagcaattgagaataatcacatgacagccctcttgaaggataaggatagcctttccactta +catgagaaccctggacttagaggaagaaaaggctcgcaagttgtcaactaaatcagcctccccagatatagt +tggcaccatcaacgcgctgctggcacgcatagcagccgcacgttcgttggtgcaccgagccaaggaggagct +gtcaagtcgacccagaccagttgtgctcatgatttcaggcagaccaggcataggcaagactcacgtggcaag +ggagattgcaaagagggtggcctcatccctgacaggagaccagaggataggactcgtgcctaggaatggcgt +tgaccactgggacgcctataagggcgagagagtggttctttgggatgactatggaatgagcaacaccataca +ggatgccctgaggctgcaggaactggcggacacgtgcccgctaaccctcaactgtgacaggatagagaataa +gggaaaactttttgacagtgatgtcataatcattaccaccaacctggctaaccctgcccccctcgattatgt +caattttgaggcctg-ttccaggagaatagatttccttgtgtatgccgacgcgccagaggttgaaaaggcaa +aacgcgactttcctggccaacctgacatgtggaaggacgctttcagacaagacttctcccatatcaagctcc +aactggcaccccaaggtgggtttgataaaaatggcaacacaccccatggtaagggcttaatgaagactttaa +ccctgagctcgctcgttgcaagggcctctggcttactacatgagaggctagacgagtttgagctgcagggcc +catcaatcacaaccttcaacttcgatagaaacaaagtcttggctttcagacaacttgccgcggaaaacaaat +atgggttggtggaaaccatgagagttggcaaccatctaaagggtgtgaaaacgatggaggagttaaagcaag +ccatcaagggcgtcaccattaaaaggtgtcaaatcatatatggtggttccacatacaccttggagtctgatg +gtcagggaagagtcttagtggacaaagtcatcagcaccactgtccaaactaacaacgagttggctggcgtcc +tatcacacctcagaaatgcaaggattagatattatgtaaaatgtgtgcaggaaactctgtactcgatcctgc +aaatcgctggggccgcatttgtcaccactcgcattgccaagcgaatga------acatcagcaatctctggt +caaaaccactcagggaggaggatgtgca--------agaggaggtcagaaaa------ccagaacccaaa-- +-----tgcgatgagg---aattcatcgttgtgtccgaagaaataaaaacagagggcaagaagggcaaaaaca +agactgggcgtggcaagaaacacaccgccttctccagtaagggcctcagcgatgaggagtacgaggagtaca +agcggatcagggaagagagaaacggaaaatactcaatagaagagtaccttcaggacagagacaaatac---t +atgaggaactggctattgccagggccactgaggaagacttctgtgaagaagaggaaatcaaaatccgacaga +gaattttccgtccaaccaggaaacagaggaaagaggaaagggcaaaccttggccttgtgaccggctctgaaa +tcaggaaaagaaacccagatgattttaaaccaaaaggagacctttgggcggatgacaccaggagtgtgaact +ataatgaaaagatagactttgaagcccccccaagcatttggtccagaatagtcaattttgggtctggatggg +gcttctgggtctccc-ctagtctattcatcacatcaacccatgtgataccaccaggcataacagaggctttc +ggtgtacccatcaagcaaatccagatacataagtctggagagttctgccgcctcagattcccaaagccaatt +agaactgatgtgactggtatgatactcgaggagggagcgcctgaaggaaccgtggcctcccttctcatcaag +agaccaacaggtgaactcatgccacttgcagccagaatgggcactcacgccacaatgaggatccagggacgc +atggtagggggacaaatggggatgctcttgacaggatccaatgctaaaggtatggaccttggcacgaccccg +ggcgactgtgggtgtccctacatttacaaaaggggtaatgattatgtggttattggagtacacacagctgcc +gcacgtggtggcaacacggtcatctgtgccacccaaggcgttgaaggtgaagcaacactcgagggtggtgac +ggcctgggcacatactgtggagcaccaatactaggacctggtaatgcacctaaactaagtacaaagaccaaa +ttttggcgatcatccaacgccccactgccaccaggaacgtatgagcctgcgtaccttgggggtcgtgatcca +agagttaagggtggaccatcactccaacaagtcatgagggaacagctcaaaccattcactgaaccacgtgga +aagccaccaaaacccagtgtcctggaagcagccaaaaacaccataataaatgttctggagcagacaatagac +ccaccaccaaaatggtcatacgcacaggcttgtgcatcactagacaagacaacctccagcggttacccacac +cacgtgaaaaagaacgattactggaatggtgaatctttcacaggaaagctggcagatcagggctcaaaggcc +aaccttatgtatgaagaaggaaaacacatgcaacctgtgtacacagcagcactcaaagatgagctggttaaa +acagaaaagatttatgacaagatcaaaaagagactactctggggttctgacctgtcaacaatgatacggtgt +gctagggcttttggtggcctcatggatgagatgaaggcacactgcacaaccctaccagtcagagtgggcatg +aatatgaatgaggatggaccagtgatcttcgaaaaacactccaggtataagtgccattatgatgcagactat +t-cgagatgggattccactcaacaaagggcggtgttggccgcggccttggaaatcatgg-tcaaattctctg +cagaaccacaatt-ggcacaaatagtggcggaagacctcctcgcccctagtgttgttgatgttggcgacttc +aaagtgtcgatcaacgaaggtctaccatctggagtgccttgcacctcccagtggaactcaattagtcactgg +ttgctaacactgtgtgccctttctgaagtgacaaacctatcacctgatgtagtgcaagccaactcaatgttc +tcattctatggtgatgatgaaatagtgagcacagatataaaagttgaccctgctaaattaacagcaaagctg +aaggagtatggtctgaggccgacacgcccagacaaaactgagggacccttagttttgagtgagaacctggct +ggactgacgtttctacgaaggtcaatcacccgagacccagcggggtggttcggaaagttagaccagagctcc +attttaagacaaatgtactggaccaaaggacccaaccacgatgaccctaatgaaaccatggtcccgcactcc +caacgaccagtacaactgatggcacttttgggtgaggcagcactgcacggtccttccttctacagtaaaatc +agcaaattggtaataacagagcttaaagaggggggaatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggagatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaaggacgcatcgccatctac---ggatggtacagccaacctcgttccagagagtcaacagga +ggttttggctttgcaaccagttgctggcgcacaaatagctgcacctgtagctgggcaattcaatgtaattga +cccctggatatatcaaaattttgtgcaggcgcctgagggagagttcaccgtgtcaccccgtaactccacagg +tgaaatcctaatgaatttggaattaggtccacagttgaatccttatttggcccacttggcacgcatgtacaa +tgcttatgctggcggttttgaagtgcaagtgctgctggccggcaatgctttcaccgc---gggtaagataat +tgtgtgtgccgtgcctccaaacttccctctgcaaaatatatcagctgcacaggccacacaacttccccatgt +tgtggttgatgtgagacaattggaacccgtggtcctacctctcccagacgtgcgtgcgggcttctaccatta +caatcaggttgaagag---tcccgtatgcgtttggtggccattttgtacactccattgaggactaattctgc +aggtgacgatgcatttacagtctcctgccgcatcctcaccagaccagcacctgattttagcttctttttctt +aataccccccacaatagaatctaaaacaacacctttcactctgcccaggttgccaatatctgagatgacaaa +ctctaga---ttccctcttgtgataaagggtatggtcgtggatcctaatcttccattgcaagctaacttcca +aaatggtaggatcacactggatggggagctccagggtacaacactacccacttcaaccagcattggcaggat +ctctggca--------------------------------------cccacatgtccagca----------- +-----------ccccaag------------------------------------------------tag--- +--g----attata---------cagcatgaggactccggtg------attccacc-cagccc--agagtctt +caatccagtgtgg---atggatttaactgagaacaactggactgaattccagccattcaatgaccaacccgc +cccacttgggtgcccagacttcaaagccaaaatattgggcacattgattc---------------------- +-------------------------------------------------------gccagcctaataatggt +tcctatt----------attttgatgcatatctagataccagacaacatggcacttttgcaccatacaccgg +gcacgccgctgtccactctgaccaacaggcaggccatttagcccaaggctacaaaattcaattctccccaac +agg---cattgagagtgaccaaaacactgacttgaacca------------------------gcttcccga +ctatggaggggcc-atgact------gtcagcaaggggctggctccagcggccgcgcccgatttccccggtg +agatgatcctttactttgtctctgacatgccagtccgtaacccaaatggggaa------------aggag-- +ggacactgagatcttgtgtttgctgccgcaggagatggtcacccacttctacgaacagcaagccccctccca +gggtgatgtcgcgcttgtgcgttacatcaatgccgagactggtagagtcatgttcgagggaaagctgcatag +aaatggattcttcacagtttctgccactgcaagaactttaattgt------acctgatggatatttcagatt +tgactcttgggttaataggttttacacattaagccccatgggaacaggcaatggccgcaga---------ag +ggctcgcatgcttgagtaatggctggagcgttctttgcaggtttgggtgctgaccttttaacaacaggtgtc +agctctttagtttctgctgg---agccacagcaatcaaccagagggcagaatttgagtataacaaggca--- +------------------------------ctacaacagagctcattccaacatgataaagaaatgctgcaa +gcccagatagctgccactgccaacttgcaaaaacagatgatagatatcaaaagggagatcctcacacaaggt +ggcttttcccccacggacgctgctagaggttctgtgggtgcaaacatgacccagatacttgattggagtggg +acgcgatactatgcaccaggggctatgagaacaacaccctactctggaaactttctgaggcagagtgtcccc +cacac------------------------------------------------------------------c +acaccaa----------------aggctaactacagacaggcaggccaa----------------------- +------------------------------gaccctagcaccgagtcattgtactcagg----gtcatggag +tgggtcat-----------ataagag------tggttcgaccaataccactgctgtct-------------- +----------ctgcatc--------------------aacagcatcgag----------------------- +------------------------------------------------------------------------ +---------------------------------------------cagaacctcagattgggt---gtcaca +acactcaaacttggcccctttccatg---aaaacgctctcaggacagcatatgtgtcacccccttcaacagt +ttcttca---cat---------------------------------------agtgtttccacagttagagg +cagtttattgga-ctcttggacccctgcat------------tcaacacccataggcagccagcttttgccc +atctgagaaagagagggatttctga--------agcttga---------------aaataatcactaa--tg +attaaa-attctaatttt-gtaatcagtgaa---atgtaa--------at-tcatgat----tctttcttta +t------------ttgc---attt------------------------------------------------ +------------------------------------------------------------------------ +- +>NC_040876.1/1-7521 |Norovirus GII.P7_GII.6, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgcgcacttgggtcactattttc +aaaaccaatcaaggacctattgggtaaacttaaaccgttgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattacaggggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggtatggttctcggcttcactgctgagaagataggccgcatgtt +gtcgtccgccgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccttaagggcgatcgaggacgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcctt +catgaagactctggatttagaagaggagaaagcaaggaaactgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaggaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctagtcccacgcaatggggt +cgaccactgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaaaccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcggacaacaagt +atgggatcatggagacaatgagagtgggtacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaagggctctgtctctgttgacaaagttgaggaccaagcgtcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagccaggtactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgctggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagcgaacccga-----aaagg +aagtggcccaaggta---gatgggaggttgaacccaaggacatagagacagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgatgagttca +aaagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctctt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagtcgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagcggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacacgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggcacaatgatcagatgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-caaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtacaggagggtctgccatcaggggtcccatgtacatcacagtggaattcaatagcacactgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgacgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agagaatatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctgagtcacctgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaatattagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttcttccatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggttttgacccgacctgcccctgattttgaatttactttcct +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccagg---ttcccagccccaatagatatgttgtacactgacccaaatgagggaatcgtagtccaaccaca +aaatggcagatgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactggggtccattctcat---gt---------actcagagtc +ggaagactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcaggaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaataaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgtaga---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgttggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgatttcaataaacag--- +------------------------------cttcaaatggcatcgtttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattttggactggaatggc +accagatattgggcacctaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttct---cacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +cgattctg-----------ctagtgtatatagctttccttcctctgcttcctcac----------------- +---------------------aatcaaccca---ttcaacagtactgtcag-------cagg--------aa +ccgggtc----t---tctag-------------------gtccacctccacat---------ctacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------tcaacacacataggcagcctctcttcgccc +atctacgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>NC_039475.1/1-7556 |Norovirus GII.17, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaagtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgtcc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>NC_039476.1/1-7536 |Norovirus GII.2 strain Env/CHN/2016/GII.P16-GII.2/BJSMQ, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgtccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggtagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaagacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtatggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggctc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggtagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----accacaagcctcccccaatcaacggtctc------aacag------------------c +tacatc---------------------------------------taggactggtgagtggataaaagatca +aaataaaaatttggaaccctacatgg---atggcgccttaaagacagcctttgtcaccccaccttccaggag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccggaagcagccgctttttgcac +acctccgtaagagggaggagtcaca--------agcttaa--t-----------gaagaggtga-------- +---a-t-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>NC_039477.1/1-7567 |Norovirus GII, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gcctcgagagacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaacgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaggatttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaagatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggaaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>LC769681.1/1-7563 |Norovirus GII Hu/IN/2018/GII.4[P31]/NICED-BCH-10206, nearly complete genome +-------------gat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacatcgaaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagagttggtc-------aaaaagatccc +acc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---aggcggcgtttccggattgcctgagctcaccaccgtcagccaacc +agaagaaaacaacacggcgttcagtgttcccccgctcaatcaaagggagaacagggacgctaaggaaccact +aactggaacaatcattgagatgtgggatggagaaatctatcattacggcctgtacgtagaacgaggccttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaagttgagctagcaccactctctttgttctg +gagacctgtgtatacccccc---agtacctcatctctccagacactcttaagagactacatggagagtcatt +cccctacaccgcatttgacaacaactgctacgccttttgctgttgggtgttagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcaggccataccaagaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacatcctcaatattctggccacatgtgattg +gaccttcccaggcatagtggaatccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaagatgct +gtcgtccgctgcatccaccttgagagcttgcaaagaccttggtgcatacggactggaaattttgaaactagt +catgaagtggttctttccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatccgcttcacctgatattgt +gggcacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaggagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaaaaagatcgcagcctccctcacaggggaccagcgtgtgggtttgatcccacgcaacggcgt +cgaccactgggatgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagtaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacactaaattgtgataggattgagaacaa +aggaaaagtctttgatagcgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ttcgaggcgcattgacttcctcgtgtacgcggaagctcctggggtggagaaggcaa +aacacgacttcccaggccaacctgacatgtggaagaacgctttcagctctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctctctcatcgcccgagcatcagggttactccacgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagctcgctgctgaaaacaagt +atggtctaatggacacaatgagagttggaaaacagctcaaggatgtcaaaactatgccagaccttaaacaag +cactcaagaatgtctcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaagccgacg +gcaagggtagtgtgaaagttgacaaggtgcaaagtgccaccgtgcaaaccaacaatgaactagccggcgccc +tgcaccacctaaggtgcgccagaatcaggtattatgttaagtgtgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcgtttgtcaccacgcgcatcgccaagcgcatga------atatacaaaatctctggt +ccaagccacagatggaagacacagaaga--------gacaaccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaagagtacgatgagtaca +agagaattagagaagagaggaatggtaagtactccatagaggagtacctccaggacagagataagtac---t +atgaggaagtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgtaaagaagagagggcctctctaggcttggtcacaggctcagaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaagctcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gtttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccgactgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagccagaatgggaacccatgcaaccatgaggattcaggggcgc +acggttggaggacaaatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacgcca +ggcgactgtggctgtccctacatctacaaaagagggaatgactacgtggttataggagtccatacagccgct +gcccgtggaggaaacactgtcatctgcgccacccagggtagtgaaggagaagccacacttgaaggaggtgac +aataaaggaacgtactgtggtgcaccaattttgggcccagggagtgctccgaaactcagtactaaaactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactaaaaccattcacagaacccagaggc +aaaccgccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcgttcgcgcaagcttgcgcatctcttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcgcttaaagatgaattagtgaag +actgacaagatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggctttcggaggccttatggatgaactcaaggcacattgtgtcacccttcctgtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatataaatatcattatgatgctgattac +t-ccaggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttc +cagatatcaataagtgaaggactcccctccggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtgagtacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttcg +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctaaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattcttgcggggaatgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagcccaagccaggtcactatgttcccccatat +aatagtagatgttagacaactggagcctgtgttgatccccttacccgatgttaggaataatttctatcacta +taaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagtcctcacgagaccatcccctgattttgatttcatattctt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacaggtcccagcagtacctttgttgttcaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggtaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggagtgtcacccaaac---------- +---------agcgacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaacagttatgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtagggaagattcaaggtatgctcacccaga------------------- +-----cc-----acaagaggagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcaacgattttactccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +ccacgattt---tgagactaaccaaaacacaa---------------------------agttcactccgg- +--------tcggcgtcatccagaacggagacactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aatact------cataatgtgcatctggcccccgctgtagctcccacttttccgggcg +agcagctcctcttcttcagatctaccttgcctg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctactcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgaagtggctctgttgaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagctccacaa +atcgggctatgtcacagtggcccacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaacgctgg---ggctggggccatcaatcaaaagattgaatttgaaaataacagaaaattg +caacaagcttcattccaatttagtagcaacctacaacaggcttcctttcaacacgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggt +acaaggtattgggcacccgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaacctcaggaatgc------------------------------ +------------------------------tgcccccgctcggggttcctct------------------ag +cacacctt-----------ccaat------------tcctctattgctactt-------------------- +----------ctgtgt-----actcaaacca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctgggaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatctgtcgcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t------tt--------tcttt- +-------a-------gt---gtctcttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC769682.1/1-7564 |Norovirus GII Hu/IN/2019/GII.3[P16]/NICED-BCH-10486, nearly complete genome +-----------aagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggagaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaaggccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtccctcaacc +ggacgtggccaacacggcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacccataaaagacctcataggaaaaattagaccattaaacatattgaatatcctagcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcatcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaaggaacggcgt +ggaccattgggatgcatacaaaggcgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattagctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggtaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagagaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagagtcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacagtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactatggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaaggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggctacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcttgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctatctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcaccgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagatcaagcatcaaaggca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggagactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggtgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggctatgcaggtggatttgaagtggaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaacttaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctgtacacacctcttagggcgaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaacttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgagatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagccctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagtcaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagaaccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccttagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggttcattagagatatcca---------ct---gagtc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggctaagctacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaacgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacgacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagaccc---------acaccaaactttaaaacgaaccag--- +gctccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------atctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gttcaatttg-c--a---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>LC769683.1/1-7558 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-10847, nearly complete genome +---------------t---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgggggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttcgaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccagtttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC769684.1/1-7538 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-10861, nearly complete genome +---------------------cgtccaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttc--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC769685.1/1-7565 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-10863, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------ttct---tttcttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC769688.1/1-7565 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-10957, nearly complete genome +---------------g---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcatttagtgttccgccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaagcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgctagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccgtggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagaccttataggaaaaatcaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +aattgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctacggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +attagatctagaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaagggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacttctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggctacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattggggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggggtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggtgaactcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtatacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagacggcccaataatatttgagaaacattccagatacagataccactatgatgcggactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagatttt +aaaattacaataaatgaggggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactgtggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaactttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttcttacgagaccatctcccgattttgattttatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgcaccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +gtctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaattaatgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgt---------------- +------------------------------tgtccctgctcggggaccttcc------------------ac +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----tctcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttcttttt-----c-tt-------------tcctt- +-------------tagt---gtcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>LC769689.1/1-7542 |Norovirus GII Hu/IN/2019/GII.3[P16]/NICED-BCH-11123, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaaggccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacggcatttagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacccataaaagacctcataggaaaaattagaccattaaacatattgaacatcctagcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtagtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcatcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaaggaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactacggcatgagtaaccccattca +tgatgctcttcgcatacaagaattagctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggcaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagagtcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactatggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaaggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggctacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gtttctgggtatcac-caagcttgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctatctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagatcaagcgtcaaaggca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaattgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggatactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccgattttgtgaatgaa +gatggcgtcgagtgacgccgttccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggctatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgtctaattgcaatgctgtacacacctcttagggcgaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaacttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgagatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagccctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagaaccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccttagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccatatctggccgcttcaccccaaagctaggttcattagagatatcca---------ct---gagtc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggctaagctacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgcttacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaagagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacgacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagaccc---------acaccaaattttaaaacgaaccag--- +gctccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------atctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcggtc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaacttggaaccacacatgc---ctggatcccttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tatttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC769691.1/1-7558 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11170, nearly complete genome +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggaattttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataatagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaacccct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgcggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattattaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcggtattagcagcagccttggaaatcatgg-tcagattctccg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caaccagtcaaacgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttattcacaggccccagcagtgcgtttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcggata------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatataatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggagccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctg- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>LC769692.1/1-7547 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11255, nearly complete genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaaggaccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaaactac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtggcaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaagtcatgg-tcagattctctg +cagaaccacattt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaactttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ctaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtcccgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>LC769693.1/1-7543 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11305, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgggg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttaagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttggt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +acccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggtttttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaactctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacaggattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aaagggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccaccttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaagtac---t +atgaggagctcgccattgccaaggccacggaagaggatttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaagattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggcgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggat +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggagatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcattagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +agaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtacaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccacatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagctgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattctt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccactcaactttctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttct-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC769694.1/1-7565 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11602, complete genome +----atgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggtgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccact +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacgaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataaggccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggtatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggatttccctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgacaggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgatcttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaaccaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagagccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaatagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaacccct +ggtgactgtggctgcccttacatctataaaaggggcaacgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaagcaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcggactac +t-cgcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaagactggaccaaagttca +atcttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactacttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaagttggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacaatatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caaccagtcaaatgac---tccactattaagttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcggata------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacgaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------ttct---tttcttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC769695.1/1-7548 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11612, nearly complete genome +------------agat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccgctgagcttaagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaatggagaggcgtt +tccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +acccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagcacttgcaaagatcttggtgcccatgccttagagatactcaaattggt +catgaagtggtttttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actggatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccccgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgccctccgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aaagggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccaccttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgctggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaagattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtattttggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggat +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggagattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcttctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +agaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtacaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccacaattaaactgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattctt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggtagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC769696.1/1-7559 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11668, nearly complete genome +--------------------gcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggtgtagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccact +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacgaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataaggccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggtatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggatttccctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgacaggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgatcttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagagccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaacccct +ggtgactgtggctgcccttacatctataaaaggggcaacgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgtcaggggtgggccctccttacagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagcgttttggaagcagccaagcaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-cgcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccgacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaagactggaccaaagttca +atcttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactacttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaagttggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caaccagtcaaatgac---tccactattaagttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagctcccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcggata------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacgaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>LC769697.1/1-7575 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11710, complete genome +----ttgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +acctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacactccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtataaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggctcagaaa +tcagaagaagaaaccctgatgacttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcccgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccgagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtaagagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttagaaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcgta----------------------------------attacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagagatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccctacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgcaagcttcacaa +atcaggctacgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcataagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC769698.1/1-7547 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11725, nearly complete genome +------------agat---ggcgtctaac-gacgctaccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttaagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaatggagaggcgtt +tccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +acccaccatggatgactccaaaataaagaaggtagcaaatatactcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggtttttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actggatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccccgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcta +aaagggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggtctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagtgtgaccatcaagaggtgtcggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccaccttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgctggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaagattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggagatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +agaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtacaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggagcctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccacaattaaactgatagcaatgttgtacacaccacttagggctaacaatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattctt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggtagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaactcgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC769699.1/1-7522 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-BCH-11726, nearly complete genome +---------------------------------------------gttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttaagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaatggagaggcgtt +tccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +acccaccatggatgactccaaaataaagaaggtagcaaatatactcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggtttttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actggatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccccgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcta +aaagggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggtctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagtgtgaccatcaagaggtgtcggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccaccttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgctggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaagattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggagatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +agaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtacaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggagcctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccacaattaaactgatagcaatgttgtacacaccacttagggctaacaatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattctt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggtagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaactcgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttttt-----c-tt-------------ttctt- +-------------tagt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>LC769700.1/1-7577 |Norovirus GII Hu/IN/2019/GII.17[Puntypeable]/NICED-BCH-11889, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaaaaccagctcaaacagt +gaaattcac----aatcaagatgtaaaccctacatccaac------------------ctcttcgccaacat +gactgttggcctgaagaggg----ccctgggggcgcggccaaaacagtccgcccctagggcaccttctccta +gcaaagagaggaagctcgaaaccacccctaaagcttcccctcccgagaaggaaagaag--acccaacatccc +caaaataccac--------------------ccccaccacctaatgg------tgaggacatagtcatcaaa +tacaccaagc----------atga---tgacttgattgagggggtgcctaccatctctaccgtagatgtatc +ccctgtacacaacaccgcatacagcgtccctccattggaccagagggagaaagttgatgcgaaggagccctt +gacgggttcaatactcgaaatgtgggacggggagatctaccactacgggctctatgtggagaagggccaagt +ccttggcgtgcataagcctccagccgctataagctttgcacgcatagagctcacccccctctctctctactg +gagggtggtctacaccccac---cttacctagtggctccagaaaccctcaagaagctccatggtgaatcatt +tccgtacacagcctttgacaacaactgttactccttctgctgttgggccttggacctgaatgattcttggct +caa---taggaagtttgtgtcaagaaccacgggtttctacaggccctatcaggattggaacagaaaaccctt +gccaaccatggatgaaggaaaacttaagaaagtggctaacgttttcctgtgtgctctctctgggcttttcac +caggcctatcaaagatcttatagggaagttgagaccgttaaacttactcaacatcatcaccaactgtgactg +gactttccctggagtcgtggaagcagtcatactgctcgcggaactcttt---ggagttttctggacaccacc +agacatctctgccttcatagcatccctcttgggtgactatgagatgcagggtcctgaagacattgcagttga +gatcgtgccagttgtcctcggcggcataggcatggtgcttgggttcaccaaagagaggatcggccgattgct +gagctccgccgcgtcatcgcttagagcttgcagagaaattggcaattatggaatagaggtggtgaaactggt +gatgaagtggttcttccccactaagaatgagacaaacgaaatggaaatggtgagggcaatagaggatgctgt +gcttgactttgaggccatagagaacaaccacctgaccacactgttgaaggacaaaaacagcctagccacctt +ccttagagaattggatttggaagaggaaaaggcgaggaagttgtcaacaaagtctgcatccccagacattgt +tggcactataaatgctctactggccagaatcgctgcagttagatccctagtccacagggccaaggaagaaat +gtcatctaggattcgtcccgttgtcatcatgatttctggccggcctggaatagggaagacacacctagcccg +tgacctggccaaaaagatggcggcaactctttcaggtgaccagagagtgggactcgtgccaaggaatggcgt +cgaccactgggacgcatacaagggtgagaggattgtgctttgggatgattatggtatgagtaaccctgtgac +tgatgcactgcgacttcaagagctcgctgacacatgccctctgaccctcaattgtgacaggatagaaaacaa +ggggaaagtatttgacagtgacaccataataataaccaccaacctggctaaccctgcccccttggactatgt +caattttgaggcttg-ctcccgccgcatcgacttccttgtctacgcggactcccctggagttgacaaagtga +agagagatttccccggccagccagacatgtggaaggatgctttcagaccagatttctcacacataaaactcc +aactggcaccacaggggggttttgacaagaacggaaacactccccatggcaagggcgttatgaaaacattaa +ctatacactcccttgttgcccgtgccacgggcctcctccacgagagattggatgaatttgatctgcaaggac +ccgagttgcccgtgtacaattttgaccaaaacagggtagctgcctttaggaaacttgcagctgaaaacaaat +atggtcttatggaaaccattaaggttggcaacaggctgaagggcgtgagtagtttagaacaactcaaggacg +ccctgaaagacataagcatcagaccatgtaggataatctacagttctacagcatatgatcttgagtcaaatg +gatcgggaagagtcaacatcaagaaggttgtggaccacaaggtccaaactaataatgaaatcaattccgcgc +tcaacaacttgcgtggtgccagggtgaggtattatgtcaagtgtgttcaggagatgacttactccatccttc +aaattgccggagcggcttttgtcacctcaaggatggtgcaaagactaa------acgtcaatagtttctggg +ccaagccaga------------gaagca--------aacggaggccgttgaagggcccccagtcccccca-- +--------gctgaag---aatggactatagtcccatcaaacacaacacaggaaggtaagaagggtaagaaca +agagtggcaggggtaagaagcacaccgccttttctagtaagggccttagtgatgaagagtatgaagaataca +agaggattagggaggaaagacaaggaaaatactccatagaagaatacttacaggacagggacagatac---t +atgaagaattggccatagccaaggcaacagaggaagacttttgtgaggaagaggaaatcaagatcagacaaa +ggatcttccgcccaaccagaaaacaacgaaaagaagagagggcaaccttgggcctggtcacggggagtgaga +tcagaaagaggaatccggatgatttcaaaccaagagggaagctgtgggccgatgacgaccgcagtgtgaact +acaatgagaagatagactttgaagcccctcctagcctttggtcccgtatagtaaactttggatcaggctggg +gcttttgggtttcct-ctaatctgtttatcacatcaacgcatgtcatccccccaaacatgactgaagctttc +ggtgtgccaataagccaaatacaaatccataggagtggtgagttctgtaggatgagatttcctaaagccata +agacctgatgtttcaggtatgacccttgaagaaggggcccctgaaggcacagtggtgactgtcctaatcaaa +agaacaactggtgaacttatgccgctggcagcccgaatgggcacccatgccaccatgaaaatacagggtaga +atgattggaggccagatgggcatgttgctcacaggttcaaatgccaaaaatatggaccttggcaccgtccct +ggagactgtggctgcccctacgtgtacaagagaggcaatgattgggtcgtcataggtgtgcacactgcagct +gctaggggaggcaacacggtgatatgcgccacccagggacctgatggagaggctacacttgaaggaggggac +aatcatggaacttactgtggagcaccaatacttggaccagggagtgcaccaaaactcagcaccaaaacaaaa +ttctggagatcatccactgctccgcttccacctggcacttatgaacccgcctatcttggtggaaaagaccca +agggttaagggaggcccatcactacagcaagtcatgagagaccaactcaaacctttcaccgctccccgagga +aagccaccccgtccggcagttcttgaagcggctaaagagaccatatgtaatgtgcttgagcagaccattgac +ccacctcagaagtggtcttatgcacaggcctgtgcctcactggacaaaacaacatcgagcggccacccccac +cacaggaaaaagaatgacaattggaatggagagtctttcaccggtgtgctcgctgatcaagcttctaaagcg +aacctcatgtacgagcaggggaagaatatgcaacctgtatatacagctgccctcaaagatgagttagtcaaa +acaagcaagatctatgaaaccatcaagaaaagactactgtggggctcagacctaggcacgatggtccgatgt +gccagatcctttggtggcctcatggatgaaatgaaagcaaattgtgtgaacttaccaattagagttggcatg +aacatgaatgaggatggacctgtcatttttgaaaaacattcaaagtataggtaccactatgatgctgattat +t-ccagatgggactcaacccaacaaagacatatattgggagctgccctagagataatgg-tcagattctctg +ctgaacctgagtt-ggcgcaaattgtggctgaagaccttctagcccctagtgttgtggatgtcggcgatttc +caaatcgccataaatgagggcttaccctctggggtaccgtgcacatcacaatggaattcaatctcccactgg +ctcataacattatgtgccatgtcagaggtgtcggggctatcaccagatgtggtgcaagcaacttcctgcttc +tcattctatggggatgatgagatagtcagcactgatattaaattggaccctatggaactaaccaacaaattg +aaggaatatggactgataccaacaagaccagataaaacagaaggaccactcataataaaggagagtctcgag +ggtctaacttttctgagaagagttgtgtgccgggatccagctggttggtacgggaaactcgaccaatcttca +atcatgaggcagctatactggaccaaaggaaccaatcatgatgaccccagcgagacaatgatcccacactct +cagagacccatacaactgatgtcattactaggggaagcagcattacatgggccaaccttttacaagaaggtt +agtaaattggtcatcactgagctcaaggaaggtggaatggatttttatgtgccaagacatgaacccatgttc +agatggatgagattctctgatctcagcacttgggagggcgatcgcaatctggctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcagctctcgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggagagttcactgtttcacctaggaactccccagg +agagatcctcctaaatttagaattaggtcctgatttaaatccttatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcttagcagggaatgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccaccaaatttcccagttgaatttttaagtcctgcccaaatcaccatgctcccgcattt +gatagttgatgttaggacccttgagccaattatgatacccctccccgacgtgagaaataccttcttccacta +taataataggccttcc---gagcgcatgcgtttggtggccatgctgtacacacctctgagatccaacggttc +aggtgatgatgtcttcacagtctcatgcagagtgctaactagacctactccagattttgaattcacctattt +agttccaccctcagtagaatctaaaacaaaacctttctctcttcccatcttgaccattgccgaattgactaa +ctcaagg---tttccagcacccattgattcattgttcactgcccaaaataataatctcaatgtccaatgtca +gaatggacggtgcacactagatggtgagttgcagggaactacccagttgctcccaactggcatatgtgcctt +cagag-----------------------------------------ggaagataacag-------------- +------------cagatgtgga--------------------------------------------aa---- +----acagtcacc----------------------------------gagacagg----------------- +----------tggcacatgcagttgacaaacctcaatggtaccccatttgacccaacagatgatgttccggc +tccgcttggcactcctgacttcacgggtctgctgtttggagttgcaagtcaaa---gaaatgctga------ +-----------------------caacactacc--------agg-----------gcccatgaggcagtgat +agcaacaactagcacacaatttgtaccaaaattaggctctgtcaactttggga------------gtagaag +tggtgatct---tcaagtgggtcaaccaacca---------------------------aattcacaccag- +--------ttggaatc---tcaactgatgacg---------agcatcctttcaaacaatgggacctacctca +ctattctggagta-ctgact------cttaatatgaatcttgcccctcctgttgccccaaacttcccgggtg +agcagctgcttttctttagatcaaatgtcccct------gtgctggtggtat------cagtg--------- +--atggcatcattgactgcctaatgcctcaagagtggatacaacacttctaccaggagtccgctccatccca +atcagacgtggcactgatcaggtacgtcaaccctgacacgggccgcactctctttgaggcaaagctccacag +aactggctacatcaccgttgctcacactggtgactatcctcttgttgttccttctaatggttacttcagatt +tgattcttgggtaaatcagttttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +aatgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcacctccactgta +ggctcattggcgaatgccgg---agcaaatgccataacacagaaaattgactttgaaaacaacaaacaa--- +------------------------------cttcaaacagcctcttttcaacatgacaaagatatgctccgc +gcacaagtggatgcaaccaagcagctgcaggcagaaatgattgccattaagcaggggatcttgaccgctggc +ggcttctcccctgctgatgcagcaagaggggctgtaggagcacccttgaccaaggtgcttgactggtctggc +acacgttattgggcaccaaattccaccaaaacaacaagctactccgggcagttcacatca------------ +ac-----------gcctgtgcaca------caccaaat---------------------------------t +ttaacaa----------------caa------acccagacctcctgcta----------------------- +--------------------------aaacccaaccttcttcttcctcttct---------------ggtag +tg-----t-----------ctata-----------gcctttcaactcaatcaacttccctccc--------- +----------tagaccctcttcttcgggttc------atctgtctcttctgcttcaacacaatcaacaaaat +tgagttcag-----------------------------------------ttt------------------c +ttctatgag------------------------------------tagaatagaaaattgggttaatcaaca +aag---aagcctcagcccttatatga---gcggggccctcaacatttctcatgtgtcacccccatcaagcag +agcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaaga--------att +aatt-a-att-ttaa------------------------------------ttaggct------aaatttta +a------------ttgg---atcttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>LC769701.1/1-7567 |Norovirus GII Hu/IN/2021/GII.4[P31]/NICED-BCH-12621, nearly complete genome +------------------------ctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccaagaccacccacaccagagttggtc-------aaaaagatccc +acc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---aggcggcgtttccggattgcctgagctcaccaccgtcagccaacc +agaagaaaacaacacggcgttcagtgttcccccgctcaatcaaagggagaacagggatgctaaggaaccact +aactggaacaatcattgagatgtgggatggagaaatctatcattacggcctgtacgtagaacgaggccttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaagttgagctagcaccactctctttgttctg +gagacctgtgtatacccccc---agtacctcatctctccagacactcttaagagactacatggagagtcatt +cccctacaccgcatttgacaacaactgctacgccttttgctgttgggtgttagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcaggccgtaccaagaatggaacagaaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataataggaaaattgaaacctctcaacatcctcaatattctggccacatgtgattg +gaccttcccaggtatagtggaatccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgattatgaactgcaagggcctgaggaccttgcagtaga +actggtcccagtggtaatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaagatgct +gtcgtccgctgcatccaccttgagagcttgcaaagaccttggtgcatacggactggaaattttgaaactagt +catgaagtggttctttccaaagaaagaggaagcaagtgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccatttgaccaccctgctcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaagagaaagccagaaaactctcaaccaaatccgcttcacctgatattgt +gggcacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaggagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaaaaagatcgcagcctccctcacaggggaccagcgtgtgggtttgatcccacgcaacggcgt +cgaccactgggatgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagtaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacactaaattgtgataggattgagaacaa +aggaaaagtctttgatagcgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caattttgaagcgtg-ttcgaggcgcattgacttcctcgtgtacgcggaagctcctggggtggagaaggcaa +aacacgacttcccaggccagcctgacatgtggaagaacgctttcagctctgacttctcacacataaaactgg +cattggctccacagggcggttttgacaagaacggtaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctctctcatcgcccgagcatcagggttactccacgagaggctagatgaatatgaattacaaggcc +ctgccctcaccactttcaactttgaccgcaacaaggtgcttgcttttagacagctcgctgctgaaaacaagt +atggtctaatggacacaatgagagttggaaaacagctcaaggatgtcaaaactatgccagaccttaaacaag +cactcaagaatgtctcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaagccgacg +gcaagggtagtgtgaaaattgacaaggtgcaaagtgccaccgtgcaaaccaacaatgaactagccggcgccc +tgcaccacctaaggtgcgccagaatcaggtattatgttaagtgtgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcgtttgtcaccacgcgcatcgccaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacaaccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaagagtacgatgagtaca +agagaattagagaagagaggaatggtaagtactccattgaggagtacctccaggacagagacaagtac---t +atgaggaagtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgtaaagaagagagggcctctctaggcttggtcacaggctcagaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaagctcaactttgaggctccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gtttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccaaggtgcaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagccagaatgggaacccatgcaaccatgaggattcaggggcgc +acggttggaggacaaatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacgcca +ggcgactgtggctgtccctacatctacaaaagagggaatgactacgtggttataggagtccatacagccgct +gcccgtggagggaacactgtcatctgcgccacccagggtagtgaaggagaagccacacttgaaggaggtgac +aataaaggaacgtactgtggtgcaccaattttgggcccagggagtgctccgaaactcagtactaaaaccaag +ttttggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggacccc +agaatcaaaggtggcccttcattgcaacaagttatgagggaccaactaaaaccattcacagaacccagaggc +aaaccgccaagaccaaacgtgttagaagctgccaagaaaaccatcattaatgtccttgagcagacaattgac +ccaccccaaaaatggtcgttcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgctggaatggggaatcctttacaggaaaattggcagatcaggcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcgcttaaagatgaattagtgaag +actgacaagatctatggcaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggctttcggaggccttatggatgaactcaaggcacattgtgtcaccctccctgtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatataaatatcattatgatgctgattac +t-ccaggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttc +cagatatcaataagtgaaggactcccctccggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttcg +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcgctccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgccccagg +tgaaatactatggagtgcacccttaggcccagatctaaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattcttgcggggaatgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagcccaagccaggtcactatgttcccccatat +aatagtagatgttagacaactggagcctgtgttgatccccttacccgatgttaggaataatttctatcacta +taaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgtcttcacggtttcttgccgagtcctcactagaccatcccctgattttgattttatattctt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacaggtcccagcagtacctttgttgttcaaccaca +gaatggtaggtgtacgactgatggcgtgctcctaggtaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggagcgtcacccaaac---------- +---------agcgacagg------------------------------------------------ca---- +-------ctcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaacagttatgatccaacagaagacatcccagc +ccctctaggaactccagatttcgtagggaagattcaaggtgtgctcacccaga------------------- +-----cc-----acaagaggagatggctcaaca--------cgc-----------ggccacaaagccacatt +gtatactgggagcaacgatttcactccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +ccacgattt---tgagactaaccaaaacacaa---------------------------agttcactccgg- +--------tcggcgtcatccagaacggagacactgcccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggcaga-aatact------cataatgtgcatctggcccccgctgtagctcccacttttccgggcg +agcagctcctcttcttcagatctaccttgcctg------ggtgcagcgggta------tccca--------- +--acatggatttggattgtctactcccccaggagtgggtacagtacttctatcaagaggcagccccagcaca +atctgaagtggctctgttaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagctccacaa +atcgggctatgtcacagtggcccacactggccaacatgatttggttattccccccaatggttatttcagatt +tgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaacgctgg---ggctggggccatcaatcaaaaggttgaatttgaaaataacagaaaattg +caacaagcttcattccaatttagtagcaacctacaacaggcttcctttcaacacgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggt +acaaggtattgggcacccgatgctaggactacaacatacaatgcaggccgcttctctaccccc--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaacctcaggaatgc------------------------------ +------------------------------tgcccccgctcgaggctcctct------------------ag +cacacttt-----------ccaac------------tcctctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatctgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggtgctt------------ttaacacgcacaagcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t------tt--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaa---------- +------------------------------------------------------------------------ +- +>LC769702.1/1-7521 |Norovirus GII Hu/IN/2021/GII.16[P16]/NICED-BCH-12629, nearly complete genome +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagcgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcgttcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggggagatataccactatggcctatacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattatactg +gcgtgtggtgtacactcctc---aatacctcatctcccctgacactctcaggaggctcagcggagaggcttt +cccttacaccgcctttgacaacaactgctatgccttttgttgttgggtgttagacctcaatgattcatggct +tag---caggagaatggtgcagagaacaacgggcttcttcagaccttaccaagagtggaacaggaaacccct +gcctaccatggacgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatattctggcaacgtgtgactg +gacgtttgccgggatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactagacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcttccactctcacaggggaccagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggcgagagagtcgtgctgtgggacgactatggcatgagcaatcccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +aggaaaagtttttgacagtgaagtcataataatcacgacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgactttctggtgtacgctgaggcaccagaagtagagaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctgc +aactcgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgatcgcccgtgcatcaggcctactgcatgagagaatggatgaattcgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacaggatcacagcattcagacaactggctgcagaaaacaagt +atggattagtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaggtcaagaacacctctgtacagaccaacaacgagttggccggggcct +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtga--------gtcagagactaaggaagaggccctcaagtcagag-- +-gac-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtata +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacgggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtgatccccccaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccctacatctataaaagaggcaacgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctgggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgatccg +cgtgtcaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcgctcgacaaaaccacctccagcgggaacccccat +cacgtccgaaagaacgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaaaaggctgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaagtaccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagagccacaact-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgttccatgcacttctcaatggaactccatcgcacactgg +ttactaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactagaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttggac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggtaaactggaccagagctcc +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaataacga +gacaatggcacttgaaccagttgcgggagcttcaatcgccgcccccttaactggtcaaaacaatgtaataga +cccctggattagattaaattttgtacaagccccaaatggtgagttcacagtctccccccgaaactcacctgg +tgaaattttgctaaatttagagttaggacctgaattaaatccatatttggctcatttggcaagaatgtataa +tggttatgcaggtggggtcgaggtgcaggtactgcttgctggaaatgcgtttacagc---aggcaaattagt +atttgcagcagtccctcctcatttcccagtagacaatttgagtcccggccaaattaccatgttcccccatgt +gattattgatgttagaacccttgaacctgttttgttaccactgcctgatgtaaggaataatttctttcatta +taatcaacagagtgaa---cctcgtatgagacttattgctatgctttatacccctcttagatctaatggttc +aggtgatgatgtttttactgtgtcttgcagggtcttaaccagaccatcccctgattttgatttcaattattt +ggtccccccaacagttgaatctaaaactaaacctttctcagtaccagtgctgactctcaatgaactgaccaa +ttcccgt---ttccctgtcccaattgatgccttgtataccagccccaatgatacaattgtggtccaacctca +aaatgggagagcaaccatcgacggtgagttgcttggcacgactcagctccttcccaatggtatctgctcatt +cagag-----------------------------------------gaagaattacagcac----------- +-----------atctgca------------------------------------------------ag---- +-------aggaca----------------------------------atcac-------------------- +-------ttgtggcacgtccaagtcaccaacttgaatggtaccccttttgacccaacagatgatgtgcccgc +tccgttgggcatgccagacttttctgggcagatatttggggtggttagccaaa---gggatttaggt----- +---------------agcaacaaccccgcaaat--------agg-----------tcccatgatgctgtagt +tccaacctatagtgccaaattcacccctaaactcggctcagtccaaattggaa---------catgggatac +caatgatct---ac---aactccagcctgtca---------------------------aattcacgcctgt +tggtctcaatgaagtt---------ggagatggcaaacat---------tttgaccaatgggtgttgccaaa +ttactctggtgcc-ctgggg------ctcaacatgcacctggcccctgctgtgtccccactcttccctggag +agagattgcttttctttagatcatatataccc------ttaaaaggtggctt------tggaa--------- +--acccatacattgattgccttgtgccacaagaatggatacaacatttctatcaagaatcagccccagcaca +atcctcggtggctctactgaggtatgtgaacccagacacagggcgcaccctgtttgaggccaaattgcatag +ggaaggattcattactgttgctagcacggaaaacagacctgtgactgtccccccaaatggttattttagatt +tgattcttgggtaaaccagttttactcactcgcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgctggtgacattgtcaccaatagtgtt +ggctcacttgtgaacgctgg---agctaatgccataaaccaaaaagttgattttgagaacaacaaacagttg +caacagg---------------------------------cttcttttaatcatgataaagagatgctgcaa +gcccaaatccaagccaccaagcaactgcaggctgacatgatctcaatcagacaaggggttttgaccgcgggc +ggcttctcccctactgatgctgcaagaggtgcagtcaacgcaccaatgacccaggtgttggactggaatgga +actagatactgggcccctggggcatcaaggaccaccagcttttctggtgggttcaccaacact--------- +ac---------------------ccgtgccagaacagttgaatcacccaagagttccccccctgcttatagt +gctttag----------------cttctgcttctagac--------------ccag---------------- +------------------------------ttctactgtctcatcttcctct------------------ac +tcggtcga-----------cagta------------gtcactaattcttctgctgcct-------------- +----cttctactaggt-----cttctgtaac------tagaaattcatc-----------cc--------gt +-------------------aatattcctcaatctgtttctt---------ctg------------------t +ctcttc---------------------------------------tcgcactagtgattgggtacaaaacca +aaatagaatgctggagccatatctga---agggatctctgcaaacagcttttgtgtcaccgccctccagtaa +ggcttct---agta------------------------------atggca---ctgtctcaaccgtgccaaa +agaaattttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgctcttcgcac +atctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagactt-------- +---t-g-att-ttcc-----tt------------tttcttt------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC769703.1/1-7470 |Norovirus GII Hu/IN/2018/GII.13[P16]/NICED-IDH-11808, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaagatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccact +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggggaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccctaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcgtcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcacctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcttggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaggatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctctacgtatgaccttgaatccgatg +gcaagggcaaggttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagccaaaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaggagcttgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggctacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgactttaaacccaaaggaaatctgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttccggctggg +gcttctgggtgtcac-caagcctgttcataacgtcaactcatgtaatccccgcaggtataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcatcggggtgcacactgcggca +gcccgtggtggaaacaccgtcatctgtgccacacaagggaatgagggtgaggcaactcttgagggtggggat +gataaaggaacatactgtggagcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagactttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacacgtaccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggaatcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggtgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagaatttacagtgtcacccagaaattcccctgg +agagatcctattaaatttagagttgggaccggatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggcgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatccctcccaactttcctgtagatatgattagtccagctcaaattactatgcttccccattt +gattgtagatgtcaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctacaccccattgagatctaatggttc +aggagatgatgttttcactgtgtcttgtagagtgttgactaggccaactcctgattttgaattcatctacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattgaccatctctgaactgaccaa +ctcccgg---ttccccatcccaatcgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaacttgctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagattttagtgggatattgtatggggtgttaactcaag---ataatgtgagtgaggg +aaca--------ggggaggccaaaaatgccaag--------gga-----------gtgtac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggactgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcactcccg- +--------ttggggtcgccc---agaacgaaaacaccccc---------ttccaacaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattgctgtttttcaggtcccgtgttccatgt--gttcaaggtctgcag------gggcgg-------- +-gatgcttttatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagatgtcgccctcatcaggtatgttaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggttttattactgtgtcacacactggcacctaccctcttgtggtccccccgaatggtcattttaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagctggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattataataagcaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagccgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactatgctccaaattctgcgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------cccag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacagcctcc----------------t------------------c +tagttc---------------------------------------aagaacagcagattgggtgcaacagca +aa---gggctcttagcccgtacatgc---agggagctctgcaaacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcatag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctttta +a-aatgtgattttat--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC769704.1/1-7520 |Norovirus GII Hu/IN/2017/GII.3[P16]/NICED-RV-100, nearly complete genome +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacccaatggcgaggaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccgccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtatacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaagaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgagtagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccacactcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcatg-ttccagaagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagactctta +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagcttcaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacagttggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttagtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagaggcccccaaatcagat-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaatagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaag +cgccccaccggagagctcatgcctcttgcggccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaataccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtggaccctctttgcagcaggtaatgagagaccagttgaaaccattcactgagcccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccttagac +cctccacaaaaatggacatacgcacaggcatgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagcg +aacctaatgtttgaggaagggaaacacatgtcaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcgacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggtcagcaaaacataataga +tccctggattatgaacaactttgtgcaagcacctggtggtgaatttacagtgtcacctaggaactcccctgg +tgaagtgcttctaaatttagaattaggcccagaaataaacccctatctggctcatcttgctaggatgtacaa +tggttatgcaggtggttttgaggtgcaggtggtcctggctggaaatgcgtttacagc---ggggaaagtgat +ctttgcagctataccccccaatttcccaaccgacaatttgagtgcagcacaaatcacaatgtgtccccatgt +aattgtggatgtcaggcagctggagccaatcaatctcccgatgcctgatgtccgcaacaatttcttccatta +taatcaaggttctgat---tcgaggttgcgcttaattgcaatgttgtatacacccctcagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagtcctgatttctccttcaatttcct +cgtcccgcccactgtggaatcaaagacaaaactcttcaccctccctatcttgactatctccgagatgtctaa +ttctaga---tttccagtgccaattgattctctgcacaccagcccaactgacaacattgttgtccaatgcca +aaacgggcgtgtcacccttgacggtgagctaatgggcaccactcagctcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgaccaagctgacgcagcaacccct----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacagctagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctcttgggacgccagactttcggggcaaagtctttggcgtggccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gataatgaggcagat---------tttcaacaatggactttacctga +ctattctggtcag-ttcact------cacaacatgaatctggccccagctgtcgcccccaattttcctggtg +agcagcttctcttcttccgctcacatttgcca------tcctctggtgggcg------gtcca--------- +--atggtatcctagactgcctggtcccccaggaatgggtccagcatttctatcaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttgtttgaggctaagctgcataa +gctgggttacatgaccatagctaagagtggtgattctccaataactgtgcccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacactcgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagtcagtgcagg---ggctggtgctattaatcaaaaagttgatttcgaaaataataaatattta +caaaatg---------------------------------catccttcaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaagctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccccactgatgcagcccgtggggctattaacgcccccatgacaaaagttctggattggagtggg +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggacaa--------- +gc---------------------tgtgcacagagct---------acaccaaaccttaaaaccaaccaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttgcc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tggaca---cagtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctttttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC769705.1/1-7566 |Norovirus GII Hu/IN/2017/GII.4 Sydney[P16]/NICED-RV-135, nearly complete genome +-------------gat---ggcgtctaac-gacgctaccgtcgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcca-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacggcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcttggcaacgtgtgactg +gacgttcgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaataggtaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataataacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcgagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaagcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttcgaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaagcaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagttattggggtgcacactgcagca +gcccgtggtggtaatactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggaatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttatccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcatttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------acgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagccggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttcttttt-----c-ct-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC769706.1/1-7525 |Norovirus GII Hu/IN/2017/GII.3[P16]/NICED-RV-281, nearly complete genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgcctctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctatgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactatgagttgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgccgt +gttagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactagacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccaaggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaatcccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccggaagtagaaaaggcga +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagagaatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgctcgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcatttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggcgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgttaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaaattg +aaggagtacggtctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactcgaccaaagctca +atcttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctatagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgtccgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctatacacaccccttagggcaaacaattc +tggggatgatgttttcactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagagccagtgaccaggccgatacagcaaccccc----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcacatgaggcaaagat +agataccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcagcaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcctaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--atgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagaatcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgctgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacaggtcc---------acaccaaactttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtctacaatgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------tagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccagca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC769707.1/1-7553 |Norovirus GII Hu/IN/2018/GII.4 Sydney[P16]/NICED-RV-515, nearly complete genome +-------------------ggcgtctaac-gacgctaccgttgccgttgcctgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggacacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcactccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtggtgtatactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttggatctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggtttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatgtattcctatgttcattgtccgcattattcac +tagacccataaaagacctcataggaaaaatcaaaccgttaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatactgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccgaagaaggaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcctagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggttgagaccagtggttgttatgatatctggcaaaccaggaataggaaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagggtcgtgctgtgggacgactacggcatgagtaaccccattca +tgatgcccttcgcatacaagagttggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccagggtc +ccacaatcaccaccttcaacttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatttacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactttggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatctccaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaacgaaaggaagagagggccacattagggctagtaacgggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggatcgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttaggaacgactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagcgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggagtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcttcgaacacaccccttccaccaggaacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcatccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagactttcactagtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggatgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctagcccccagtgtagtagacgtgggggacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgtacttctcaatggaactccatcgcacattgg +ctgctaacactatgtgccttgtctgaagtcaccaaactgtctcctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactagaccctgaacagctgaccgctaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +gggctcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaagtc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattctt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actatacg----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagtcaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagctcccacttttccgggtg +aacagcttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatctggactgtttgctcccccaggaatgggtgcagtacttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctcttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaacaacaggaaattg +caacaagcttccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgaaggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcatt---------------------------------g +ccaggaa----------------gaattaatcttaggg--------------atgc---------------- +------------------------------tgttcctgctcggggacccccc------------------ag +taagtctt-----------ctaac------------tcttctactgccgcctctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctgggaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---gaggggcccacaacatatcatttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactagcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaaggc-------- +---a-a-aat-tgat-----ta-----t------ttttcttttt-----c-tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC769708.1/1-7571 |Norovirus GII Hu/IN/2018/GII.4 Sydney[P16]/NICED-RV-567, complete genome +----atgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcctccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacggtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gtcgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaggagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaagacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttccttgtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaagcaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacagtt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacccccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaagtggacatacgcacaggcgtgtgcctcactcgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaaaagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcaggtccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccagtatagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaattttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttt--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---gggggacccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>LC769709.1/1-7543 |Norovirus GII Hu/IN/2018/GII.3[P16]/NICED-RV-629, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagtttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgcctctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcacctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaatatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctatgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactatgagttgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgccgt +gttagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactagacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccaaggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaatcccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccggaagtagaaaaggcga +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagagaatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgctcgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcatttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtga--------atcagagactaaggaagaggcccccaagtcggga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaactatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggcgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagttaag +actgagaaaatctacggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgttaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaaattg +aaggagtacggtctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactcgaccaaagctca +atcttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctatagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgtccgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctatacacaccccttagggcaaacaattc +tggggatgatgttttcactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagagccagtgaccaggccgatacagcaaccccc----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaacggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcacatgaggcaaagat +agataccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcagcaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcctaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--atgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagaatcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccctttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgctgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacaggtcc---------acaccaaactttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtctacaatgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------tagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------cagaactagggactgggtcaaccagca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaag--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--t---atcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>LC769712.1/1-7536 |Norovirus GII Hu/IN/2018/GII.3[P16]/NICED-RV-987, nearly complete genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaaggccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacggcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattatttac +cagacccataaaagacctcataggaaaaattagaccattaaacatattgaatatcctagcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcatcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaaggaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattagctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggtaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagagtcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagtgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactatggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaaggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggctacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcttgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctatctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagatcaagcatcaaaggca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgatcagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggagactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggctatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctgtacacacctcttagggcgaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcgttcaacttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgagatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagccctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagaaccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccctatgatcctgcagaagacataccagg +ccccttagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggttcattagagatatcca---------ct---gagtc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgcccccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggctaagctacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacgacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagaccc---------acaccaaactttaaaacgaaccag--- +gctccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------atctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---a--------------------------------------------------- +------------------------------------------------------------------------ +- +>LC769713.1/1-7552 |Norovirus GII Hu/IN/2018/GII.3[P16]/NICED-RV-988, nearly complete genome +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaaggccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacggcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattatttac +cagacccataaaagacctcataggaaaaattagaccattaaacatattgaatatcctagcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcatcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaaggaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattagctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggtaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagagtcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagtgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactatggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaaggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggctacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcttgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctatctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagatcaagcatcaaaggca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgatcagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggagactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggctatggcgctggagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggctatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctgtacacacctcttagggcgaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcgttcaacttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgagatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagccctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccagatcaacaagcagaaccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccctatgatcctgcagaagacataccagg +ccccttagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggttcattagagatatcca---------ct---gagtc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgcccccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggctaagctacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacgacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagaccc---------acaccaaactttaaaacgaaccag--- +gctccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------atctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>LC769714.1/1-7532 |Norovirus GII Hu/IN/2019/GII.4 Sydney[P16]/NICED-RV-1218, nearly complete genome +-------------------ggcgtccaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------taaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagcaggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttcttt------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC769715.1/1-7531 |Norovirus GII Hu/IN/2019/GII.3[P16]/NICED-RV-1373, nearly complete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaagcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaaggccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagtagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacggcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtactagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacccataaaagacctcataggaaaaattagaccattaaacatattgaatatcctagcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcactcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcatcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaaggaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattagctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggtaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagagtcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggagaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgttcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactatggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaaggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaagaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggctacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcttgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggagtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctatctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtccttgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagatcaagcatcaaaggca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaagcagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggagactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccaccttgctagaatgtataa +tggctatgcaggtggatttgaagtacaggtgatcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctgtacacacctcttagggcgaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgagatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagccctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcctt +caggggcgttctcaccagatcaacaagcagaaccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccttagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------tcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggttcattagagatatcca---------ct---gagtc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggctaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcaaacaattgattttgaaaacaataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctctgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacgacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagaccc---------acaccaaactttaaaacgaaccag--- +gctccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------atctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcgactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>OR069404.1/1-7543 |Norovirus GII isolate GII/Hu/US/2015/GII.3[P21]/NIH38.3 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaaacttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggacaaaccacca +aaa---------------------cccccaagaccgcccacaccagagctggtt-------aagacaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccagtcatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctccacagtaacccaacc +ggtggagaactctacggcattcagtgtcccccctctcagtcagagggagaacagagatgcaaaggaaccctt +gactggaaccattctggaaatgtgggacggggagatctaccactatggcttgtatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcggccatcagccttgctaaggttgagctgacccctctgtccttgtattg +gaggccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcacggggagacgtt +cccttacatagcctttgacagcaactgctacaccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagagaacaacaggcttcttccgaccctaccaagactggaacaggaaacccct +ccccacgatggatgactccaaagtgaagaaggtggccaatattgtcctctgcgctttcgcctcagtgttcac +tagaccaattaaggatattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatcactgatcctcttggctgaactattt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgaactacaggggcccgaggacctcgttgtgga +actcgtacccgtggtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggtaaaatgct +ttcatctgctgcttcaaccctgagagcgtgtaaagatcttggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgaggcaaacgaattggctatggtgagatccatcgaggatgcagt +actagacctcgaggccattgagaacaaccatatgacaactctactcaaggacaaggacacccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaagctgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaactccctactggcaaggattgcagccgcccggtctctagtacacagggctaaggaggaatt +gtcaagcagaccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccacctagctag +agacctggcaaagaagatcgcctcctcactcgcgggtgaccagagggtgggtctcatcccacgcaacggagt +tgaccactgggacgcgtacaaaggtgaaagagtcgtcctctgggacgactacgggatgagcaaccccatcca +cgacgctctcagactccaggagctcgctgacacctgccccctcacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaacttagccaacccagcgccactggattatgt +caattttgaagcttg-ctcaagacgtatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagatatgtggaaagacaccttcagacctgacttctcacacataaaactgt +cactagccccacaaggaggttttgacaagaatggcaacacccctcatggaaagggtgtcatgaagaccctca +ctgctggttctctcgttgcccgagcatcagggctcctccatgagagactagacgagtatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttagacaactcgctgctgagaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaacgtgcacgtcgagaaggtgaagaacgccaatgtgcaaactaacaacgagctctccggggctc +tgcaccacctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgtaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagacctggagga--------ggctggcaatgaggagggttgcccaaaacctaga-- +-aat----gatgagg---aatttgtcatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +aagctggccgtggcaagaagcacacagccttttccagcaaaggtctcagtgatgaggagtacgatgagttta +agagaattagggaagagagaaacggcaagtactccatagaggaatacctacatgacagggacaagtac---t +atgaggaagtggccatagccagagcaaccgaggaagacttctgtgaagaagaggaggctaaaatccggcaaa +ggatttttagaccaacaaggaaacaacgcaaagaggaaaggtgctctctcggtttggtcacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acgctgagaaactcagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gtttttgggtctcgc-ccagtctctttataacatctacccatgtcatcccccaaggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcataaatcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagacgtttcgggcatgatcttggaggaaggtgctccagaaggcactgttgccacaattctcatcaag +agaccaaccggggaactcatgcccttggcggccagaatgggcactcacgcgactatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgccaagaacatggatttgggcacgactcct +ggcgactgtgggtgtccctacatatacaagagagggaacgactacgtggtcattggagtccacaccgccgcc +gctcgtggagggaacaccgtcatctgtgcaacccagggaagcgagggtgaggccacgctagaaggtggtgac +aacaaaggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggagatcttccaccacccccctaccacccggaacctatgaaccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaagcctttcactgagcccagaggc +aagccacccaaaccgggtgtactagaagctgccaagaagaccataatcaatgtgcttgaacagacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcattggacaaaacaacttccagcggtcaccctcac +cacatgcggaagaatgagtgctggaacggggaaactttcacagggaaactggcagaccaagcatcaaaggct +aacctaatgtatgaagaaggaaagaacatgaccccagtatacacaggagctttgaaggatgagctagtcaag +actgataagatctacgggaaaatcaaaaagaggctcctgtgggggtcagacctatcgaccatgatacggtgt +gcacgagcctttggtgggctgatggacgagctcaaggcccactgcgtctcactaccggtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccaggtacaaataccactatgatgcagactac +t-cccgctgggactcaacgcaacagagggcagtgctggctgcagctttggaaataatgg-tcaaattttcac +cagaaccccagct-agcccaagtagttgcagaagacctcttgtcccccagtgtgatggacgtgggtgacttc +aagatatcaatcaacgaggggttgccctctggtgtgccttgtacctcacaatggaactccattgcccactgg +ctcctaacactgtgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagaaaaattgacatcaaaactg +aaggaatacgggctaaaaccaacccgccctgataaaacagaaggacccctaattatatctgaagacttgaat +ggcctaaccttcttgcggagaacggtaacccgtgatccggctgggtggtttggcaaactggatcaaagttca +atactcagacagatgtactggaccagaggaccaaaccatgaggacccttctgagacaatgataccacactcc +cagagacccatacaactgatgtcactactaggtgaagctgcactgcatggcccatcattctacagcaaaatc +agcaaactggtcatctcagaattgaaagagggtggaatggacttttacgtgcccaggcaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttatgtgaatgaa +gatggcgtcgaatgacgctgctccatctag---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacctctcactggccagcataatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtgctccttaaattggaattgggtccagaaataaacccctatttggcccatcttgccagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtgatccttgctggaaatgcgtttacagc---agggaaaataat +ctttgcagctgtacccccaaactttccaattgacaatttgagcccagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccaatcaaccttccaatgcctgatgttcgcaacaccttctttcatta +caatcaaggagctgat---tcgagattgtgcttagttgcaatgttatacacacctcttagggcaaataattc +tggtgatgatgtctttactgtgtcttgtagagtgctgactaggcctagccctgatttctcattcaactttct +tgtgccacccactgtagagtcaaagatgaaaccctttactatccccattctgactatctctgaaatgtctaa +ctctagg---ttcccagtgccgattgactcactgcacaccagcccaactgagaatatcgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccagcttctgcccagtcaaatctgtgcttt +cagag-----------------------------------------gcgtgctcactggat----------- +-----------caacaagcagg------gccagtgaccaaaccgacacagcaacccccaggcagttca---- +-------atcacc----------------------------------gttggcac----------------- +----------------atacaattggataatctaaatggaaccccctatgaccctgcagaggacgtcccagg +ccccctaggaacaccagactttcggggcaagatcttcggcgtggccagccaga---ggaa------------ +-----cc------------ctgacagcacaact--------aga-----------gcacatgaagcaaaggt +gaacacagcagctggtcgtttcaccccaaaattaggttcactagagatgtcc------------actgaatc +agatgactt---tgaccaaaatcagccaacaa---------------------------gattcaccccag- +--------tcggcattggggttgacaa------------tgaaatggactttcaacagtggtctttacctaa +ctattctggtcag-ctcacc------cacaacatgaacctggcaccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacagttaccat------cctctggtgggcgg-----tcca---------- +--gcgggatcctagattgcctggtcccccaagagtgggttcaacatttctaccaggagtcggcccccgctca +aacccaagtggccctggttagatatgtcaaccctgacactggtagagtgctgtttgaggccaagttacacaa +actaggcttcttgaccatagctaagaatggtgattctccaataactgtccctccaaatggttactttaggtt +tgagtcttgggtgaacccattttacacacttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcagggttagctggtgacatgttaacaaatactgta +gggtctctggttaatgcagg---ggctaatgccatcaatcaaacagttgaatttgaaaataacaaatac--- +------------------------------ttacaaaatgcttcctttaatcatgataaagaaatgttgata +gcacaagttgaggcaacaaagaaactacaggctgatatgatggccatcaagcagggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggctctgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-catca--------- +gg-------------cagtgcgcaggaccacgccagac---------------------------------t +tcaaaat----------------gaaccaggctcccaaatccacacctagcagtgggtcttcagtgaggtca +aacacaacccaagtgac--tagtctgagctcacactcatccgggtcgtcccgatcca--------------g +tgggtcta--------------------------------cagtagtcagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +atctaa---------------------------------------caggactagagattgggttaaccaaca +gaacttcaatttggaaccacacatgc---ctgggtctctcaggacggcttttgtcactccaccatctagcac +agcttct---agtt------------------------------caggta---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattg-------- +-------ctt-taa--------------------attt-g--------at-tt-aaattaaatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OR051787.1/1-7551 |Norovirus GII isolate GII/Hu/US/2011/GII.4NewOrleans[P4]/NIH11.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacggccacctactccagaactggtt-------aaaagtattcc +tcc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctaggattgagctagcaccactctccttatactg +gagacctgtgtacactcctc---agtacctcatctccccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactacggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataagacctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaggttgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctggagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgagatctatcgaggatgcagt +cttggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgatatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtacaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaaattag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagccctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcaaaaccatgccagagctcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tacaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggatgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggccttagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctccctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggaatgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcgaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgccttagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggccacgctactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggtatgcttctgacaggttccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaagcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattaacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggatcctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgtcgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttctctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgg---tacccaccaaaatgaaccccaacaatgggagctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatgaacttggattgtctgctcccccaggagtgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggatacaggtagggttttgtttgagtgtaagcttcatag +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctatctttgctggattggcatctgacgtccttagctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaacaattgaatttgaaaataacagaaaactg +caacaagcttccttccagtttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccat +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctctttgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-c-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>OR051903.1/1-7522 |Norovirus GII isolate GII/Hu/US/2013/GII.6[P7]/NIH29.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgcctttggcaaccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttccaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------tgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggtacaatactggagatgtgggatggtgaattctaccattactccgtatacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccaa---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgctcgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagattaaaaaggtggccaacgcgattctttgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggcgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcatccgctgcatcaacactgcgagcatgtaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgatcgaggatgctgt +cctggatatggaagctataggaaacaaccatctcacaaccctccttaaggacaaggacagcctcacggcttt +catgaagactctggacctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagatatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggccaaagaagaaat +gtttagcaggattagacctgtggttgttatgatctctggtagacctggcatcggaaaaacccacatggcaag +gcacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaaccctaaactgcgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacttagtcaacccagcgcccctcgattatgt +gaacttcgaggcatg-ctccagaagggtcgactttctggtctacgcagagtcaccagagattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagtcagacttttcccacataaaactga +ctctagccccacagggcggatttgacaagaatggcaacaccccccatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggaa +ccgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagacattagaagatctgaaagtcg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaaattgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +ttcttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacactctgatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaagccaactgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaatggaaaatactccattgaggagtacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaagggaattaaagaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggtttaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagagggcactgtctgctccatactcgtgaag +agacccacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacgggggcaaatgcgaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaatactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgaa +agccttggcacttactgtggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccagaggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacggttatgaatgttctggaacaaaccattgac +cctgctaagccatggacctattcccaagcatgcgcctctctggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgatcactggaatggggaatctttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcaacccgtgtacacggccgcactcaaagatgagctagtcaaa +actgataagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcatcctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacctagccagctagatgttggcgacttt +gtcatcttagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacattgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaacctcgatcccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgataaaactgagggccccctcgtgataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +caacgggccacacagctcatggcccttctcggcgaggcttccctgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggctatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggtcatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacagaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaactaggcccagaacttaacccctatctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagagaacatcagtgcagctcaaataactatgtgtccccatgt +aattgttgatgtgagacagcttgaaccagtacttctgcccctccctgacataaggaataggttctttcatta +caatcaggagaacacc---tcccggatgagacttgtggccatgctttatacccccctgagggc---caactc +tggtgaagatgtgtttactgtttcctgtagggtcttgacccgtcctgcccctgattttgagtttactttctt +ggtaccaccgactgttgaatcgaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggctagtcaga---gagatgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcccga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcagtagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagactgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaacaaccccatcgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcattcaaacatgataaagagatgttgcaa +tcgcaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtctcctgccccttctttgcacactgcttc---------------------------a +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgtctcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtcag-------tagg--------aa +ccggttc----t---tccag-------------------gtccatccccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcag +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atccacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-agga--------------------tttctcc------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR051927.1/1-7509 |Norovirus GII isolate GII/Hu/US/2014/GII.4DenHaag[P4]/NIH37.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctgatc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggagggtgaagtagtggtt +tcttacagtg----------ccaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccgctcaaccagagggaaagcagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgtactg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaagaggttaagcggagaaacatt +tccctatacagcctttgacaacaactgctatgctttttgttgctgggtcctggatctaaacgactcatggct +gag---taggagaatgatccatagaacaactggcttcttcagaccctaccaagattggaatagaaaacccct +ccccactatggatgattccaaattgaagaaggcagctgacatattcctgtgtgccctgtcttcgctgttcac +tagacccataaaagacataataggaaagttaaagcctctcaatatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagagctcttt---ggaggtttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +actcgtccccgtagtgatgggggggattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgcagcatccaccttgagagcttgtaaagaccttggtgcatatgggttagagatcctaaagttagt +catgaaatggttcttcccgaagaaagaggaagtggatgaactggctatggtgagatctattgaggatgcaat +attggaccttgaggcgattgagaacaaccatatgaccaccttgctcaaagacaaagacagccttgcaacata +catgaaaacccttgacatcgaggaagaaaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgttccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacccgtggtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaaatagccaagagaatcgcaacctccctcacaggagaccagcgcgtgggcctcatcccacgcaacggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggcatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcataactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcattgacttcctcgtgtatgcagaggcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttcagatttctcccacataaaactga +cactagctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccatgggctccctcactgcccgggcatcagggctgctccatgagagactggatgagtttgaactacaaggcc +caactctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagtcgggaagcggctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacacctcaatcaagaaatgccaaattgtgtacagtggttgcacctacacactcgagtctgatg +gcaatggtaatgtgaaaattgacaaagttcagagcacctccgtccagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagagtcaggtactatgtcaagtgtgttcaggaagccctctattctatcctcc +agattgctggggctgcatttgttaccgcgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaggcccaaa-- +-gac----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaata +aaactggtcgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccgaccaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagatttcaagcccagggggaaactatgggctgacgatgacaggagtgtggact +ataatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacgtcatcccacgtcataccccagggtgcaaaggagttcttt +ggagtcccaataaaacaaatccaggtgcacaagtcgggcgaattctgtcacttgagattcccaaaaccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacaatactcatcaaa +agatccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaaggacgc +accgttggaggccaaatgggcatgcttctaacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctatgtctacaagagaggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgcaacccaagggagtgagggggaagccacacttgaaggtggtgac +agtaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaag +ttctggagatcatccacagcaccgctcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgctgcagcaagttatgagggaccagttaaaaccatttacagagcctaggggt +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaacagggaaagaacatgaccccaatctacactggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggcactatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgc +gctcgagcatttgggggcttgatggatgaactcaaagcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaagatggccccatcatcttcgagaagcactccaggtacaaataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagggccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtggcagaagatcttctctcccctagcgtgatggatgtaggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcaccctctgtgcaatctccgagaccacaaatttgtccccagacatcgtgcaggctaactctcaattc +tccttctatggtgatgatgaaattgtcagtacagatataaaattggacccagaaaagttaacagcaaagctc +aaggaatatgggctgaaaccaacccgccctgacaaaactgaaggacctctcgtcatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccacgaagacccatctgaatcaatgatcccacactct +caaaggcccgtacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattacagagctcaaagaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtcgccggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggtcctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggttactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttaattcccttacctgatgttaggaacaatttctaccatta +taatcagtcaaaagat---tccaccatcaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcctgtcgagttctcacgagaccatcccctgattttgactttatattctt +ggtaccacccacagttgagtcaagaactaaacctttcactgtcccaatcctgactgttgaagaaatgaccaa +ttcaaga---ttccccatttctctggacgggttgtttacgggtcccagcaatgcccttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgcttttgggcaccacccaactgtctcctgttaacatctgtacttt +caaag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcaca----------------------------------atttcaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttgggaactccagatttcgtgggcaagatccatggtatgctcactcaaa------------------- +-----ct-----acaagaggagatggctcgacc--------cgg-----------ggccacaaggccacagt +atacactggaagtgctgacttcactccaaagctgggcagtgttcaatttaaca---------ctgatacaga +aaatgattt---tgaccctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtaacaccacccaccgaaatgaaccccaacaatgggagctcccaag +ttattcaggtaga-ggtgcc------caaaatgtacacctagcccctgctgtggcccccactttcccgggtg +aacaacttcttttcttcagatccactctccccg------gatgcagcgggta------tccca--------- +--acatggatttagattgcctactcccccaagagtgggtgcagcacttctaccaggaagcagctccagcaca +atctgatgtggctctattaagatttgtgaatccagacacgggtagggtcctgtttgaatgcaaacttcataa +atcaggctatatcacagtggctcacaccggccagcataattttgtcatcccccccaatggctacttcaggtt +tgactcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgctc---------tataatggcaggagctctctttgctggaatggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgatcttgaaaataacaaagaattg +cagcaagcttccttccagtatagcagtaacctgcagcaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaagccactaaaaggttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggattggaacgga +acgaggtactgggcccctaatgctaataccacaacatacaatacaggccacttttccactccg--------- +ca---------------------atcttcgggggcgct---------------------------------g +tcaggaa----------------gatttaatcccaggattcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------aa +tacatctt-----------ctaat------------gcttctgctaccactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaagcagcctctcttcgccc +aacttcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR065073.1/1-7553 |Norovirus GII isolate GII/Hu/US/2011/GII.2[Puntypeable]/NIH10.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggcaaaaccagcacaaacagt +gtaattcac----aaccaagatgtaaatcctacatccaac------------------ctctttgccaacat +gactgttggcctaaagaagg----ccctgggggcgaggccaaaacagcccgcccccaggatttcctccccca +gcagggagggaaaacctgaaaacaatcccaaaactcctccccaaaacaagggaggaaa--gaccaacatccc +cccaataccgc--------------------ctccaccgcccaacgg------ggaagacatagtcatcaaa +tacactaaac----------agga---tgatgtagttgaaggggtgcccaccgttgccacggtggatgtttc +ccctgcacacaacaccgcctatagtgtcccccccttggaccagagggagaaggttgaagccaaagaaccctt +gacaggatcaatactcgaaatgtgggatggtgagatctatcattatgggctctatgtggaaaagggtttggt +tcttggcgtgcacaagcctccagctgctataagccttgcacgcatagaactcactcccctctccctgtactg +gaggacagtctacaccccac---cttatctagtagcaccagaaacactcaggagactccacggggagtcgtt +cccatacacagcttttgacaacaattgctactccttctgctgttgggccctggacctgaatgattcttggct +cag---tagaaaatttgtatcaaggaccacaggcttcttcaggccctatcaagattggaacaggaaaccttt +accaaccatggatgagggaaagctcaagaaagtggccaatgtgtttttgtgtgccctctctgggctcttcac +caggcccattaaagacctcatagggaagctgaggccactcaacatacttaatattgttaccaattgtgactg +gaccttccccggagttgtggaggcactcatactgcttgcagaactcttc---ggagttttctggaccccacc +agacatttccgctttcgtagcgtcacttttaggtgattatgaaatgcagggccctgaggacatcgcggttga +aatcgtgccggtagtcctcggtggcataggtatggtgcttgggttcaccaaggagaaaatcggccgactgtt +gagctccgccgcttcctcacttagagcatgtagggagattggcaactacgggatagaagtggtgaaattagt +tatgaaatggttcttccccaccaagagtgaaacaaacgagatggacatggtgagggcaattgaggatgctgt +gctcgacttcgaagccatacaaaacaaccacatgacagcactgctcaaagacaaaaacagtctggcaacctt +ccttagggaactagacatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagacattat +cggcaccataaacgcccttctagccagaatcgccgccgctaggtccctagttcatagggccaaggaagagat +gtcatctaggatgcgtcctgttgtaatcatgatctctggccgacctggtataggcaaaacgcatctagcccg +tgacctggctaagaaaatggcggcgacactctcaggtgaccagcgagtggggctagtgccgaggaatggcgt +tgaccattgggacgcatataaaggagagaggatcgtgctttgggatgactatggaatgagcaaccccgtgtc +tgatgctctgcggctccaggagcttgccgacacatgtcccttaacacttaactgtgataggatagaaaacaa +ggggaaagtgtttgacagtgacactataattatcaccaccaatttggccaaccctgcccccttagactatgt +caactttgaagcttg-ctcccgccgaattgatttccttgtctatgcagactctccctcggtggacaaggcga +agagggacttccctggtcaaccagacatgtggaaggatgcattcaagtcagatttctcacacataaaacttc +agttggctccacagggaggctttgataaaaatggaaacaccccccatgggaaaggtgtcatgaagacattga +ccacacactcactcatcgcccgcgccacgggccttctgcatgagagattggatgagtttgatctgcaggggc +ccgagctacccgtgtacaattttgaccacaacagggtagctgccttcaggagactggcggctgacaacaagt +acgggcttatggaaaccttgaaggtgggcaacaaattgaaaggcgtcaagaccctagaacagcttaaggatg +ccctaaaggacataagaatcataccctgtagaatagtctacaactcgatggcttacgacctcgattcggatg +gatcagggagagtcaacgtcaaaaaggttgcagacaacaaaattcaaaccaacaacgagctcaattccgcgc +tcaacaatctgcgcggtgccagagtgagatattatattaaatgtgtccaagagatgatatattccctcctcc +agattgctggcgcggccttcgtcacatcaaggatgacacggagactga------atgtcagtagtatttggg +ccagaccaga------------aaaaca--------agcggaggccgctgaagagcccccagtcccccca-- +--------actgagg---actggaccatagctccagcaaatgctgcccaggagggtaaaaagggtaaaaaca +agagtggcaggggcaagaaacacactgccttctctagcaaaggcctaagtgatgaagagtatgatgagtaca +aaagaatcaaagatgagaggcaagggaaatactccatagaagaatacctccatgacagggaccgatac---t +atgaagaattggccatagccaaagcaacagaagagaacttctgtgaagaggaggaggtgaaaatcagacaga +ggatcttccgcccgtccaagaaacagcgcagggaagagagggcgactctagggttagtcacaggcagtgaga +taaggaagaggaacccagacgacttcaaaccaaaaggaaaactgtgggctgatgatgaccgcagtgtaaact +ataatgagaaaatagattttgaagcgccccccagcctttggtcccggatagtcaactttggatcaggctggg +gcttctgggtgtcct-ccaacctattcattacttcaacacatgtcatccccccgaacatgactgaggctttc +ggtgtaccaataaaccagatacaaatacacaggagtggtgagttctgcaaaatgaggttcccaaaagctata +agaactgatgtctcaggcatgatccttgaagaaggagctcccgagggaacagtagtgaccatactaatcaaa +aggcccaccggtgagctcatgccattggccgcccgaatgggtactcatgccaccatgaaaatacagggaaag +atgcttgggggccagatgggtatgctcctcacagggtccaatgccaaaaacatggacctaggcaccattcct +ggagactgtggttgcccctatgtgtacaagagaggcaatgactgggtggtcataggagtgcacaccgcagcc +gctagaggtggcaacaccataatctgcgccacccaggggccagatggtgaggccacacttgaggggggagac +aaccgtgggacttactgtggtgcaccaatactcgggccaggaagcgcgccaaagctcagcaccaaaacaaag +ttttggaggtcatccaacgtcccactcccacctggcacctatgaacctgcttatctgggtggaaaagaccca +agggtcaagggaggaccatcactgcaacaggtgatgagagaccaactcaagcctttcaccgcccctcgaggg +aagccaccaagaccggcgatcctggaggctgccaaagagaccatctgtaatgtgcttgagcagaccattgac +ccaccccaaaaatggtcttatgctcaggcttgtgcctcactggataagacgacatctagcggtcacccccac +catatgaaaaagaatgacaagtggaatggggagtctttcactggtgtgttagctgatcaggcctccaaagca +aacctcatgtttgagcaagggaaacacatgcaacctgtgtacactgctgcactcaaggatgaactcgttaaa +accagcaagatctatgaaaatgtcaagaaaagactcctatggggttcagatctgggcacaatggtccgctgt +gccagggctttcggtggtcttatggatgagatgaaagctaattgtgtgaatttaccagtcagggttggcatg +aacatgaatgaagatgggcccatcatttttgagaaacattcaaagtacaagtaccattatgatgctgattat +t-ctaggtgggactcaacccaacagagacacattctgggagctgcccttgagataatgg-ttagattctcag +ctgagcctgaact-ggcgcagattgtatctgaagatctcctagcccccagcgtagtggacgttggtgacttt +aaaattaccataaatgaaggcctgccctctggagtaccatgcacatcacagtggaactcaatttctcattgg +ttaataacattatgtgccatatcagaagtttcagggctgtcgccagatgtggtgcaatcaaactcctgcttc +tctttctatggggatgatgagatagtcagcactgatattaagttagaccccatgaaactaaccaacaaattg +aaagactacggactgatcccaacaagaccagacaaaacagaagggccactcatagtcagagagagcctcgag +ggtttgactttcctgagaagggacgtgtgtcgagacccagctggttggtacggaaaacttgaccaatcctca +atcatgagacaattgtactggaccaagggacccaatcatgaagatcccaatgaaacaatgatcccacactcc +cagagacccatacagctaatgtcattactgggggaggcagcactacatggaccaaccttctacaagaaagtc +agcaagttggtcattactgagctcaaagagggtggaatggatttttacgtgccaaggcaggaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggctatggctcttgaacccgtggctggtgttgctatagcagccccggttactggtcaaacaaacattataga +cccttggattagaacaaattttgtccaggcccccaatggtgaattcaccgtttcccctcgaaatgcccctgg +tgaaattttagtaaatctagaattgggtccagaattgaatccttatctggcacatttggcgaggatgtacaa +tggttatgctggtggtatggaggtgcaggtcatgctggctggaaacgcgtttacagc---tgggaaactgat +ctttgctgccgtgccaccccattgcccagttgaaaatcttagcccacaacaaattaccatgttcccccatgt +gattatagatgttaggaccttggaacccgttctgctaccactccctgatgtcaggaacagcttcttccacta +caaccagaaagatgac---cctaaaatgaggattgtagctatgctttacaccccccttagatcaaatggttc +tggtgaagatgtgttcacagtttcatgcaggattctaaccaggccctcccctgattttgactttacatatct +ggtgccaccaacaatggaatctaaatcgaaaccattcaccataccaatcctcacacttggtgagttgtccaa +ttccaga---tttcctgtgcccatagatcagatgttcaccagccccaatgaggttatatcagtgcagtgtca +aaacggaaggtgcactttagatggggagctccagggaacaacacagctccaggttagtggcatttgtgcatt +caagg-----------------------------------------ggaaggtgaccg-------------- +------------ctcacataca--------------------------------------------tg---- +----acaatg-------------------------------------accacctc----------------- +----------tacaacatcactgtcacaaatctgaatgggtccccttttgatcccactgacgatgtccctgc +cccgttaggtgtaccagattttcagggaagaattttcggtgtcatcagccaaa---gagacaacta---tac +ccacaat-----gggcatgatcaacctgcaaat--------agg-----------ggtcacgacgccgtggt +ccccacccacacagcaaaattcactccaaaattgggtcagatccaaattggca---------cctggcagac +tgacgacctatcagt---caatcagcctgtta---------------------------aattcactccag- +--------ttggc------ctcaatgatgtgg------------aacattacaaccagtgggcagtccccgg +gtatgctggtgcc-ctgagc------ctgaacacaaaccttgccccttccgttgcaccgatgtttccggggg +agcggatactcttcttcagatcttaccttcccc------ttaaaggtggtta------tggca--------- +--acccagtcatagactgcctgctacctcaggaatgggtgcaacacttctaccaggaggccgccccctcact +aagtgatgtggctctcattaggtacatcaatccagacactggtcggactttgtttgaggccaagctccacag +agctggtttcataacagtctcaagcaacaccagcgccccagtggtagtgcccgccaacgggtatttcagatt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------agtaatggcaggagcttttattgcaggattggctggtgatatgttaacaaattctgta +gggtctttagttaatgcagg---tgctaatgtaattaatcagaaagttgattttgagaataataaatat--- +------------------------------ttacaaaatgcatcattctcccatgacaaagagatgctggct +gcacaagttgaggcaacaaagaaactccaggctgacatgatcggcattaggcagggggtcttgaccgctggc +ggcttttcccccgctgacgccgcgagaggggcaatcaacgcacccatgaccaaggttttggattggaacggc +acgcggtactgggcaccgggcgccaccgccacaacttcaatgtctggtggcttcaccggc------------ +ca-----------ggttatgcacagatccacaccaaat---------------------------------t +ttaaaac----------------ctcccaggctcctagacccgct--------------------------- +-------------------------------------------------ccc---------------agcag +tggatcgt-----------ctgtg------------agatcagattcaacccaggttaccaac--------- +----------ctgagc-------tctcattc------ctcagggtcttcacgatccactgggtccacagttg +ttagctctc------tgt--------------------------------cat------------------c +ttccaa---------------------------------------caggactagagattgggtcaaccaaca +gaacctgaacttggagccccatttgc---ctgggtccctcaggacagcctttgtcactccaccatctagcag +tgcttct---agca------------------------------caggca---cagtctcaaccgtgccgaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaagcagccgctgtttgctc +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattatttgatta +gatt-t-gtt-tgat------------------------------------tggaaa---------atcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OR065090.1/1-7559 |Norovirus GII isolate GII/Hu/US/2016/GII.4Sydney[P31]/NIH29.10 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaatctaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtatgtggatcgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggttgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaagattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgttaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactctaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctttggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaatcacatgaccgccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagat +ctccagcaggccgagacctgtcgttatgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtaggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcacacataaaactga +cattggctccacaaggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +agatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaattcggcaga +gaattttcagaccaacaaagaaacaacgcaaagaagagagggcctctctcggcttagtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtgaccacactgctcatcaag +agaccaactggagaactcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacgtactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacccggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgtac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaatttagctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggcccgatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctctcccctagcgtgatggacgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctaacattcctccggagaactgtgacccgtgatccagctggttggtttggaaaattggaacaaagctca +atcctcaggcaaatgtactggaccaggggtcccaaccatggagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccagcccatctga---tgggcccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaatgcttgagccccagccaggtcactatgttcccccatat +aataacagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgaa---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccgttctctgtcccagttttaactgttggggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcggtgcctttgatgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctctcaaaattggagcgtttatgacccagcagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcaaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcgccgaatttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaaa +tcatgattt---tgaagataaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtaacaccaccccccaaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-agtact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------aataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctggaacagatgcggcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcgaggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tttc-tt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OR069405.1/1-7546 |Norovirus GII isolate GII/Hu/US/2015/GII.6[P7]/NIH53.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctggtaaagaagaggt------tggtacattttccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtggtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------caaagtcgggaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaatacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccccgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---attatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccttacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagcttaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcgcttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttactgcacttgctcgcatcgtgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggagcttttt---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgggatggaaaccctgagggcaattgaggatgccgt +cctagacatggaagctataggaaacaatcacctcacaacccttctcaaggacaaggacagcctcgcggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagattttcccggccaacctgacatgtggaaggaccactttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgataagaatggcaacaccccccatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgtttatgagaggagagacgagtttcagctccagggga +acgatcttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctcaaagttg +cactgagggacgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcctccaatg +gtaagggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccgaagggtaacctgtgggcggacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagcgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgaggggaatgag +aaccttggcacttactgcggcgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaagaggacagtgatgaatgttctggaacaaaccattgat +cctgctaagccgtggacctactcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaagaatgatcattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggcctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgcttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcggcctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttgggaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattaatgagatcaaaagcggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggcgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttactgtgtcttgcagagttctgacccgccctgcccccgactttgagtttacgttttt +ggtgccaccaactgtagagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcagccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +tagag-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaagggactgtatttggggtcggtagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacaacccatcc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttact------ctcaatatgaatttggcccccgcagttgcccctgctttccctggtg +aacgcgttctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggccacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaagcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtggagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttacag +tcacaagtactggccactaaacagctccagcaagaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacgaccttgactg-------cggg--------gt +ctagttc----a---tctag-------------------gacaacctcctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggctcagcccgttcatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +ggcttct---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtacgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OR069406.1/1-7525 |Norovirus GII isolate GII/Hu/US/2019/GII.14[P7]/NIH129.1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aaacctgtcaat +g------ac----agtaataatgccaccccttctgacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggtact-------------aaggcaccc +agcagtga----------------tcagcattgtcccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------atcgta +caatttgatg----------caaagtcagaaactgtaattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccccccattaagtgagagggagcacagaccagctaccgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccataaaccaccggcggctataagtctcgcgacgatagaactcacccccatatcactctactg +gagacccgtctacactccca---actacttggtctccccagacacattaaagggcctcgccggtgagaagtt +cccctacacggccttcagcaacaactgttataacttctgctgttgggtgcttgagctcaacgacacatggct +taa---cagaagatgcatatccagaactaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +gagaccaatcaaagatctattaggtaaactcaagccattgaatctactacacttgcttgcatcctgtgattg +gacgtttgcgggtatagtagagacagtcatcttaatggcggagcttttc---aatgtattctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgagttgcaaggtcctgaagacttggctgtgga +gctcgttcccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +tatgaaaaccctggatctagaagaggagaaagcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatattagctagaatagctgctgctagatccctactacataaggccaaagaggagat +gtttagcaggattagaccagtagttgtcatgatctcaggcagacctggcattggaaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgatcagagggtcggactcgtcccgcgcaatggtgt +cgatcactgggacgcctacagaggagagagagtggtcttgtgggacgactacggtatggggagccctgtcaa +agacgccctgacactgcaagaattggccgacacatgtccagtcaccttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgttatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccccggccagcctgacatgtggaaagaccattttaagtcagacttttcccacattaagctga +ctctagccccccagggtggatttgacaagaatggcaacaccccacatggcaagggcaccatgcggtccctaa +cccaggggtccctaaccgcgagagttgcaggccttgtccatgagaggaaggacgagttccagctccaaggaa +atgaccttcaaacatacaattttgacaccaacagagtctccgcatttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcgcagcgctcaagagtgtgaagaccttggaagatcttaaatttg +cattgagggatgtaaaattcaatgaatgtgaaataatttacaagagttctaagtaccgagtctcttccaacg +gtaaaggttcagtctctgttgacaaagttgaagacaatgcttcccagactgttaacgaggtgcattcagcac +tcctcagactcaggcaggcgagggctagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtca---------------gtagga------tctctagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagcccga-----aaagg +aagtggcccaaggca---ggtgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacatacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggattagggaagaaagaaatgggaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagttgctcgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaggaaacaaaggaaggaggaaaggggtgtgctcggcttggtcaccggctcagaca +tcaggaagagaagaccagacgattttcaaccaaaaggcaatccatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccactaggcaccggttggg +ggttttgggtttcat-ccaaccttctgattacaacaacacacgtcctacctaaagggattaaggagctcttt +ggagttgaaatcaaacaaatccaaattcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggagggcgccccagagggcactgtttgctctgtgctcgtgaaa +agacccacgggtgaaatgatcccccttgcagtgaggatgggtacacatgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgctcctcacaggggcaaacgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgcccctacatctacaagcgtggcaacgacatcgttgttgcgggtgtccacaccgcagca +gcccggggaggcaacactgtaatatgtgctacccaggggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggtgccccaattctgggccctggcaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcatcaagtcatgagagaccagttgaggcccttcacagaacccagaggc +aaaccgcctagacctgcaattttggaggaagccaaaaagacagtaatgaatgtcctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaaccacttcaagtggtagtccccac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagaccaggcttctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggctgcgcttaaagatgagcttgttaag +actgacaaaatctacaagaagataaagaagaggcttctatgggggtcagatcttggcacaatgatcagatgc +gccagggcttttggtggtctcatggatagtatgaaggcaagttgcatagctcttccttgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcatcctctctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagtcagcttgatgttggcgacttt +gtcatctcagtccaggaaggcctgccatcaggagtcccatgcacatcgcaatggaattcaatagcacactgg +atactcactttgagcgcgatggcagaagtatcaggcctctcaccagatgttatccaagctcactcttgtttt +tccttttatggggacgatgagatcgtcagcactgacatcaaccttgaccctatgaaattgacacaaaaactt +agggagtatggcctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgaaagcatggttcctcattct +cagcgggccacacaactcatggcccttctcggtgaagcctcattgcatggtcctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggaattttacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgttgctggggcctccattgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaagtcctacttgatttggaattgggtcctgaacttaacccctatcttgcacacttggccagaatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgccgccatcccacctagcttcccttatgaaaatttgtcacctgcccaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtacacttgccaatgccagatataagaaatgttttctatcatta +taatcaggataatagt---tccagacttaggcttgtagctatgctttatactcctctgagggccaataattc +aggtgatgatgtgttcacggtgtcttgtcgcgtcctaacgcgcccttctccagatttccagttcactttcct +ggtcccacctacagttgagtctaaaactaagaacttcaccctccccgttctcagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcagatgcacaactgatggtgagctgcttggtaccactatcttacaatctgtgtctatttgcaattt +caaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acaa----------- +------------------------------------------------------------------------ +----------taccaattacaactcaccaacttggatgggtcacccatagatctaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----taatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgatt---ta---------aatcaagctc +cagtgattt---tgatctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcacccctttagacagtggtccctgccaag +ctacggtggtcac-cttgcc------ctgaataaccatttagccccagctgtgacaccgctctttcctggcg +agcagatcttgttctttaggtcatacattccaa------gtgccggaggcca------tacag--------- +--acggtgctatggactgtttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagaccaccccattgtgatgcccactaatggttactttaggtt +tgaagcttgggttaatcctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gatcc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcactcgtgggtgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacaacaggtctccaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgacgctgcaagaggcgcagtcaaagcacctatgacgcagatccttgattggaatggt +tctagatattgggctcctaactccatgaagacaactggctactcaggtacattttcttctcaaggcatta-g +aa-----------gttcccctcacctgtc-------------ta---------------------------a +tcaaaccc--------------caagtgttgttaaatc---------------------------------- +-------------------------------------tactagatctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagttctccttctactgccccctcgc----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----c---tccag-------------------acctgacactgtgt---------ccacaaagac +ttccac-------------------att--------------gtcgaggacaagtgattgggtcagaggtca +aaatgagatgcttgacccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcaa +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttacgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC777250.1/1-7570 |Norovirus GII GII/Hu/JP/2023/GII.4[GII.P16]/EF23-1 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttgatc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaggaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgtt +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctaacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgattcatggct +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggttgcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtaagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggatcattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgcccccttactttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctatacagaccaacaacgagttggtcggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaatcgccggcgctgcgtttgtcaccacgcgtattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagtccaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacgctagggctggtgacaggttcagaaa +tcagaagaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccctgtaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaacccct +ggtgactgtggctgcccttacatctataaaagaggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgaccca +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aagcctccaagaccaagtgttttggaggcagccaaacaaactattatcaatgtccttgaacaaaccctggat +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggagtggtgagaccttcactggtaaattggctgaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacctgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaaacattccagatacaaatatcactatgatgcagattac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctaccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccctgaacagttgaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttggac +ggacttactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccccagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatctggccaggatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgatccccttgcccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtctcgtgtcgagttctcacgaggccatcccccgattttgatttcatattctt +agtaccacccacagttgagtcaagaaccaaaccattctccgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggtttctcaaaattggaacaactacgacccgacagaagaaatcccagc +tcccctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttagcccccgctgtagcccccacctttccgggtg +agcaacttctcttctttagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaggcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacagtgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgctcggggaccctcc------------------ac +cagacctt-----------ctaac------------tcttctactgccacctcta----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta------------ttttcttttt-----c-tt-------------ttctt- +-------------tagt---gtctttaaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>OQ940068.1/1-7560 |Norovirus GII isolate SH18-36, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactccagagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +attagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaagacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccggtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgccccctcaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---aggtcaaagtga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactggggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactccc +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacaacaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaactattatcaatgtcctcgaacaaaccctggat +cctccacaaaagtggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgttaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcggata------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940069.1/1-7560 |Norovirus GII isolate SH20-212, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccactttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgaag----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaagagtggagttggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggtgactacgagttacaagggccagaagacctcgccattga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccccgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtggttgtaatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactacggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caacttcgaggcctg-ttctaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacagg +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaggccacaatt---agatcaaaatga--------atcagagactagggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaagaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagattcacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaggcagccaaacagaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgtacctt +caggg-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaagattgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tgcagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--a-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940070.1/1-7560 |Norovirus GII isolate SH20-247, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacatttttcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctatgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagagccaaggaagagct +gtctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgatcgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaataagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagccattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggagtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggagatcatgg-tcagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaacc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtgccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcacccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaagattggaacaactatgatccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgatagagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaagatactgggctccagatgctagaattacaacatacaattcaggccacttttccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tctcctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940071.1/1-7560 |Norovirus GII isolate SH21-2, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctttgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +acttgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgactaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcgggctcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaatcccattca +tgatgctctccgcttacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacatctatacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacggaaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcggccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccggaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactagcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacgcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggtcatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttgcccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgtccaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttggaa---------ctgacacaaa +caatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaactcctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacgaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940072.1/1-7560 |Norovirus GII isolate SH21-8, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacctataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggaccaaagagtcggacttataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttgcagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgaggggcccctgatcattagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctgtcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagtcaggtcactatgttcccccacat +aatagtagacgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtttttacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaaaccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccactatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----acttaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940073.1/1-7560 |Norovirus GII isolate SH21-23, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtttcccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttaggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcatatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccgcaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaataccttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctacaaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaagaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaacgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagcgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaaccatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccactcagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaaccaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +tcatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccagtggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcgggggccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940074.1/1-7560 |Norovirus GII isolate SH21-56, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagaact +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctacgcatacaagaattggctgatacgtgtccccttaccttaaattgtgatagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctaattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagcggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtatacaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttttgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagttcatatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccactggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccagaggc +aaacctccgagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaaaagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaaggactcccatctggtgtgccgtgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacctctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgctgcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagagctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaataccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +accaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcaacaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcagtgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggattggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcgggggccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940075.1/1-7560 |Norovirus GII isolate SH21-289, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacacatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940076.1/1-7560 |Norovirus GII isolate SH21-367, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactttcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagatcgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940077.1/1-7560 |Norovirus GII isolate SH21-562, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggagggtggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcaggagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccctacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaataatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940078.1/1-7560 |Norovirus GII isolate SH21-592, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggagggtggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcaggagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940079.1/1-7560 |Norovirus GII isolate SH21-611, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaaacttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagaaatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcaggagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacggaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacaccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatagcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtaactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaacaatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattggggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940080.1/1-7560 |Norovirus GII isolate SH21-668, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctacggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcgatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataagggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatggaaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacactt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aagctggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcataaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccggcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggagccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagcaaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940081.1/1-7560 |Norovirus GII isolate SH21-682, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagaaatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcaggagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacggaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacaccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtgatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatagcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtaactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaacctaatagcaatgttgtacacaccacttagggctaacaatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggaaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattggggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OQ940082.1/1-7560 |Norovirus GII isolate SH21-703, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaaaaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tccttcacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcgcaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +acctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaaggaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtactcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagtaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggagcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----aa-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC744867.1/1-7560 |Norovirus GII.4 LM14-2 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744868.1/1-7560 |Norovirus GII.4 LM14-6 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744869.1/1-7560 |Norovirus GII.4 LM14-7 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744870.1/1-7560 |Norovirus GII.4 LM14-8 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744871.1/1-7560 |Norovirus GII.4 LM14-9 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744872.1/1-7560 |Norovirus GII.4 LM14-13 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744873.1/1-7560 |Norovirus GII.4 LM14-15 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744874.1/1-7560 |Norovirus GII.4 LM14-17 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtggagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744875.1/1-7560 |Norovirus GII.4 LM14-19 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744876.1/1-7560 |Norovirus GII.4 LM14-22 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactacagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744877.1/1-7560 |Norovirus GII.4 LM14-25 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgatttcgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744878.1/1-7560 |Norovirus GII.4 LM14-26 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaggaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccattttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744879.1/1-7560 |Norovirus GII.4 LM14-27 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaaacttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccacct +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtaatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccagaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgacgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgcacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacgattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtccatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctctcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744880.1/1-7560 |Norovirus GII.4 TDK012716 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccacactgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagacgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttgaacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgatgagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcagggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC744881.1/1-7560 |Norovirus GII.4 TDK020116 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccacactgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagacgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttgaacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgatgagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcagggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC771966.1/1-7564 |Norovirus GII.4 Hu/Japan/KaoGII4/2019 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccgcaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttaggtgtgcacaagccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcagaaggctcaatggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatgttgaacattctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgccga +actcgtaccagtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcacctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgacgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcgcacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagataggtac---t +atgaagagctcgccattgccaaggctacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttccggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaagttcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcactgtggcaaccgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtggtccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +agacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacagaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaggggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaggtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgagcagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatctgaac +ggactcactttcctccgaaggacggtggctcgtgacccagctggctggtttggaaagctggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggagcctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggcccagacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgtttccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcactgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaactatgacccaacagaagaaatcccagc +tcctctaggaaccccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtggcccccacctttccgggtg +agcagcttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +cgactcctgggtaaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctc---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactg +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaagcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +acaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgctcggggttcctcc------------------ag +caagtatt-----------ctaac------------tcttccactgctacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ctttcttttc-------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC771967.1/1-7550 |Norovirus GII.P7/GII.6 Hu/Japan/KaoGII6/2019 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctagtaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagagaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------ccggcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggagactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccaccgaaccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccgaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcgctgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtctccagtttcatagcttccctgataggtgattttcaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacattacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggacgccgt +cctggacatggaagctataggaaataaccatcttacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggccaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggccaagagtatcgccaacaccatgagcggcgaccagagggtggggctcgtcccacgcaacggggt +tgatcattgggacgcctataggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgcactaacactgcaagagctggccgacacctgcccagtaactttaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaatttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggatcattttaaaccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagtttcagcttcagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttagaaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttatagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctccgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttatactctaatac +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccgg-----aaagg +aagtggctcaaggca---gatgggagattgagcccaaggacacagaaccggaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctctagtaagggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggagtacctgcaagaccgggatcgctac---t +atgaggaagtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaagaagaaaggggggtgcttggtttggtttctggctcagaca +tcaggaagagaagaccagacgattttcaaccgaaaggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaacttttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggtttagattcccaagaccaatt +aggccagatgttacagggctcgtgctggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacccacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccaccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccactggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcgcttaaagatgaactagtcaga +actgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggacagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggcctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcgatggcagaagtgtcgggtctctcaccagatgttgttcaagcccattcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agggagtatggcctggtccccacccgacctgacaaaactgagggtccccttgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaatcgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaacagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggcgaggatgtgtttacggtgtcttgcagagttctgacccgccccgcccctgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagatatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcacattagatggaacactccaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacactacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacagcctactc---------------------------gcttcaccccca- +--------tcggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------ctcaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggtta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaatataaggcaaggggtcttgaccgctggc +ggcttttcccccacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaatattggattggaatggg +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaactaaggttaat----------------------------------- +----------------------------------------------------------------------gg +tgattctg-----------ctagtgtgtatagttctgcatctattgctccttcac----------------- +---------------------aatcaactcg---ctcaatggctttgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgattgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacgccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP205527.1/1-7506 |Norovirus GII isolate RIVM-NOV-2016-0039_R01-01 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttctggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctttgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcgttgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggatacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggccttagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagagctaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcactacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acacgggcagatggctcaaca--------cgc-----------ggccacaaagctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt--------------ac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagcaggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205528.1/1-7465 |Norovirus GII isolate RIVM-NOV-2016-0195_R01-02 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------gat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcacc +g------ac----agtaataacgccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtgccaaagagcacc-------------aaagcaccc +agcagtgg----------------ccaaagttgccccacagtcaagatcgggcctaaaacactaacaatccc +ccc-----------------------------cgagcccccaaatgg------tgaggac------acggtg +caatttgacg----------caaagtcagaaactgtaattgggctaccggacttgacaacggt---gcaaaa +cgaacacgagaacaccccatacaccgtccctccattaagtgagagggagcatagaccggccactgaaccact +tcctggtacaatattggaaatgtgggacggtgagttctaccactactctgtgtacgtcagcgacggcaaagc +tctgggagtccacaaaccaccggcagctataagcctcgcgactatagagctcacccccatatcactttactg +gaggcctgtttataccccca---actacttggtctccccggacacattgaagggcctcgctggtgagaagtt +tccctacacggccttcagtaacaattgctataacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---caggagatgcatttccagaaccaccggcttctttaaaccataccagtcttggaacaggaaaccact +cccaaccgtcgatgatggaaagatcaaaaaggtggccaatgcgatcctctgcgcactcggctcgctgttttc +aagaccaatcaaagatctgttaggcaaactcaagccattgaacctgctgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggaaacagtcatcttaatggcggaacttttc---aatgtcttctggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtaga +gctcgttcccgtggttatgggcggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +atcgtccgctgcatcgacactgcgggcgtgcaaagacctagggaactatgcccttgacatacttaagttggt +catgaagtggttcttcccaaagaagcaggagaaggctgagatggagaccttgagggcaattgaagatgccgt +cctggacatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagccttacggcttt +tatgaagaccctggatctggaagaggagaaggctaggaaactgtccaccaaatcatcttcaccggacatagt +tggcaccattaatgccatactagctaggatagctgccgctagatcccttctacataaagccaaagaagagat +gttcagcaggatcaggccagtggtcgtcatgatctcaggcagacctggcataggaaaaacccatatggcgag +gcatctggctaagagcatcgccaacaccatgagtggcgaccagagagtcggactcgttccgcgcaacggtgt +tgaccactgggacgcctatagaggagagagagtggtcttgtgggatgactacggtatgggcagccctgtcaa +agatgccctgacactacaggaattggctgacacatgtccagtcactttaaattgtgataggattgagaataa +agggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcaccccttgactatgt +gaactttgaggcgtg-ctctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagatcatttcaagccagacttttcccacatcaagctga +ctctagccccccagggtggatttgacaagaatggcaacaccccacatggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaggctggccgcagataacaagt +atggaatcatggagacgatgagagtgggtgcggcactcaagaatgtgaggaccttggaggatcttaaaattg +cattgagggatgtgaaattcaatgaatgtgaaataatttacaagaactctaagtatcgagtttcttccaatg +gtaaaggctcagtttctattgataaaattggagacaatgcatcccagactgcaaacgaggtacactcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgctttcaagacctcgtctacactctcatgc +aagttgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggtcaaaccgaccgagat-------------ccaggatgtgaatgagtccga-----aaagg +aagtggctcaagaca---aatgggaaattgagcccaaggacacagaaccagaaggtaagaaaggcaagaaca +agaaaggaaggggcaagaaacacacagctttctctagtaaaggcctgagtgatgaagagtatgacgagttta +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaattttccgcccgacaaagaaacaaagaaaggaggaaaggggtgtgctcggcttggtcaccggttcagaca +tcaggaagaggaaaccagacgattttcaaccaaaaggcaaattatgggcagatgacaccagaagtgtggact +acaatgagaggctcgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggtaccggttggg +gattctgggtttcgt-ccaaccttctgatcacggcaacacacgttctgcccaaaggagttaaggagctcttt +ggagtcgaaatcaaacaaatccaagtccacaagtctggagagttctgcaggtttagattcccaagaccaatc +aggccagatgtcacaggactcgtgctagaggaaggcgccccagagggcactgtttgttctgtactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacaaggcagg +accgttggtggccagatggggatgctcctcacaggagcaaacgccaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaagatggggaagcggtccttgagggaaatgag +aatcttggcacctattgtggcgccccgattcttggccctggtaaagcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttaccacctggcacatatgaacctgcctacctaggtggcaaagacccc +agggtcgaaaaaggcccctccctgcaacaagtcatgagagatcagttgaaacccttcacagaacccaggggc +aaaccacctagacctgcaatcttggaggaagccaaaaagacagtgatgaatgttctagaacagaccattgac +cccgccaagccgtggtcctattctcaggcatgtgcctcacttgacaagaccacatctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggcccacttgcagatcaggcatctaaagct +aacctcatgtatgagcaggccaagcacgtacagcccgtgtatacggccgcgcttaaagatgagcttgttaag +actgacaagatctataagaagataaagaagagactcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggaaagttgcatagccctcccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaacccaacagaggagcattctttctaccgctatggaagtgatgg-tgcggttttctg +ctgaaccggaatt-ggcacaagtggttgcagaggaccttttggctcctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccgtgcacatcacagtggaattcaatagcacactgg +atcctgactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttc +tcattctatggggatgatgagatcgtcagcactgacatcaaccttgaccctatgaagttgacacaaaagctc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattccttcgtaggtcgattgctcgggacccagctggttggtttggaaaattggaccaagactca +attctcaggcagttatactggacaagggggcctaaccacgagaatccgtacgagagcatggttcctcattcc +cagcgggccacacagctcatggcccttcttggtgaggcctcactccatggtccccagttttacaagagagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagtcgtcgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagcccctgcaggtgagtttacagtttcccctaggaattcccccgg +tgaaatcttgcttgatttggagttgggaccagaattgaacccctatctcgctcacctggcccgcatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgagaatttgtcaccttcacaaattacaatgtgcccccatgt +tataattgatgttaggcaattagaaccagtcctattacctatgccagatattaggaacaatttctttcatta +caaccagggcaatgat---ccaaaattgagattggtagctatgctctacacccccttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacccgattttgaattcacattttt +agttccccccacggttgaatccaagaccaaacagttcacattgcccatcctcaaaatatcagagatgactaa +ctcaaga---ttcccagtaccagtggaaatgatgtatacagctaggaatgagaaccaagttgtccaaccaca +gaacggtagggtcacacttgatggtgagctattaggcaccacacccttgttggctgtcaacatctgcaagtt +caagg-----------------------------------------gagaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaatactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggctcacctgacttccaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccaca--------aga-----------gcccatgaagccaacat +caacactggtggagaccaatatgcccctaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtacgccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggtg---acactt---------cccatcctttcagacagtgggccctgcctcg +gtacggtggacat-ctcacc------aacaatacccacttggctccagcagtggcccctttgttcccaggtg +agcagattctattctttaggtcacagataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaggagtgggtccagcacttctaccaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaatccagacactggtagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgacaacccgattgtcatgccaccaaatgggtattttagatt +tgaagcctgggttaatcagttttactctctcgcccccgtgggaactgggaatgggcgtaga---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcagggggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaagttgagtttgactataacaagcaa--- +------------------------------cttcaaaatgcatccttctcccatgacaaggaaatgctccaa +gcccaaattgaagccactaaacatctgcaacaagagatgattaatataaaacaaggggtgctgacagctgcg +gggttctctcccacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggtgccatgaggacaacaggctattcagggactttcactcacctgccccctatg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacagcttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctc----------------- +---------------------ttaaaacaca---atcaactgctctctcagg-cacttcaag--------gg +taggcac----c---ttatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagtac-------------------a--------------------aggacatctgattgggtacgtagcca +gaatgaaaggttgagccccttcatga---atggagcgttgcaaacagcatatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacacccacaggcagccactcttcgccc +atctgcgcaggcgaggggagtcaca--------gatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205532.1/1-7484 |Norovirus GII isolate RIVM-NOV-2015-0108_R02-06 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtcgaat-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaagaccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaaggta +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactacgggctgtatgttgagcgggggtatgt +actcggagtgcacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaatttgagtggagagacttt +tccatatacggcctttgacaacaattgttatgccttctgttgttgggtcctagaacttaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactctttac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgattacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacgtgaccatccttctcaaggataaagatagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcaggcagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccacctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacccagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtacgcagacgcacctgacatcgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagaccagactttacacacatcaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctaccaaccttcaattttgaccgcaacaaagttgccgcctttagacaattagcagctgtaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagacactggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggcacaaaatgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggtaagaaca +agtctggccggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agaggatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggaaatcaaaatccgccaaa +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcctccgagtgtttggtctaggatagtcaactttggcacaggctggg +ggttctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggctttt +ggagtgcccataaaccagatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggcacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatccctgcaacaagttatgagagaccaactaaaaccttttacagagcctagaggg +aagccaccaaacccaaacgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacttccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaactgtattacactccctattagagttggtatg +aacatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccgcagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaacgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttgctcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaactggacccagagaaattgactacaaagctc +agagaatatggtcttaaacccactcggcccgacaaaaccgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +attctcaggcagttgtactggacaagaggacccaaccatggagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtacaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggggtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcccactcctgattttgagtttacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggagagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttggggtagcaagtcaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcgacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccagtttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgactt---ccaatt---gcagcctacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacaatgggaactaccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaggaatggatccaacacttctatcaggaatcagcgccctccca +atcagacgtggccctgatcaggtatgttaaccccgacacggggcgcacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaatgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacaacagacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggagttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcgcccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcctctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------caggacggcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +gggagttttgga-ctcctggacgcctgcgt------------ttaatacgcacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205533.1/1-7490 |Norovirus GII isolate RIVM-NOV-2015-0257_R02-08 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatgcc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgaatggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggcggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggacacccgcac +cacgtccggaagaatgactactggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-taagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagagtaatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205534.1/1-7490 |Norovirus GII isolate RIVM-NOV-2015-0259_R02-10 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatgcc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgaatggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggcggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggacacccgcac +cacgtccggaagaatgactactggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-taagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagagtaatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205535.1/1-7490 |Norovirus GII isolate RIVM-NOV-2015-0336_R02-11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggatatcattggaaagcttcgaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggacgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactaaggctccaagaattggctgacacctgtcctctgaccctaaattgtgatagaattgaaaacaa +agggaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggtcaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggatttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagcatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaggtac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagttcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaacagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacttatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaggttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaaatggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggacacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcgtcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcacattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-taagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggtctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggtcttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgttaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaaatgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagagtggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacattttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccgaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205536.1/1-7490 |Norovirus GII isolate RIVM-NOV-2015-0346_R02-12 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggatatcattggaaagcttcgaccactgaacattcttaatacactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggacgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactaaggctccaagaattggctgacacctgtcctctgaccctaaattgtgatagaattgaaaacaa +agggaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggtcaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggatttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagcatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaggtac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagttcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaacagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacttatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaggttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaaatggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggacacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcgtcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcacattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-taagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggtctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggtcttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgttaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaaatgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagagtggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacattttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggt +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccgaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205537.1/1-7490 |Norovirus GII isolate RIVM-NOV-2016-0128_R02-13_major nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagagcttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gactttcgcaggcatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacattgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcaggccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacccgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgtcaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgcccatacatatacaaaaggggcaatgaccttgtggtcatcggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaaatggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagcg +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttgagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgatccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcacctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgacg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcaggtctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccagctaatggacactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggtcttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ttc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gttta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205538.1/1-7508 |Norovirus GII isolate RIVM-NOV-2016-0128_R02-13_minor nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +agg---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggttgcctgagctcaccactgtcagacaacc +ggaggaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +taggcccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttgaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaattctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggccccacagggtggtttcgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgattaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaaggaaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactccatagaagagtacctccaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +ttaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ctagtctatttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaaaactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgaattggtgaaa +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcactccagatacagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcttgacattccttcggagaactgtgactcgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggtgaggctgcgctccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagcctatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgtctttacggtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacgga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtacttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggtgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205539.1/1-7508 |Norovirus GII isolate RIVM-NOV-2016-0188_R02-14 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaagaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgccaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagacaaagacagtctggcagccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaactaaatctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctagtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +tgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcaaggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggatacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccaggactcaaacaag +cactcaagaatgtctcaatcaagaggtgtcaaatagtgtatagtggttgcacctacatgctcgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcaccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagttcccatcaaacagatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcgctcccacctggcacttatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcattgcagcaagtcatgagggaacagttgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccattatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcaaatggctcaaca--------cgc-----------ggccacaaagctacggt +gtacactgggagcgccgattttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205541.1/1-7488 |Norovirus GII isolate RIVM-NOV-2017-0180_R02-19 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gtttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagttatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtattccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttaggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgagtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaaactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtggcaaatatattactatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgagaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacaaaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtcttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcagccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgattcg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaacactctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaatcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcggtcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcctatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatattattctggaaaattcacatcaacc--------- +gt---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205542.1/1-7487 |Norovirus GII isolate RIVM-NOV-2018-0049_R02-21 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacgac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgaattggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaatacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgcagt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaagaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +aggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagtcggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaagggatggacttaggaacaactcct +ggtgattgtggctgtccttacatctacaaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcaacagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggcttccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaat +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaataaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctctgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaagttcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaagaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcgaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205543.1/1-7460 |Norovirus GII isolate RIVM-NOV-2018-0059_R02-22 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------ttgccgttgcttgc------------aacgac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaggaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgaattggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaatacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgcagt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaagaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +aggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagtcggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaagggatggacttaggaacaactcct +ggtgattgtggctgtccttacatctacaaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcaacagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggcttccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaat +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaataaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctctgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaagttcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaagaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcgaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205544.1/1-7470 |Norovirus GII isolate RIVM-NOV-2018-0327_R02-23 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +gag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcataaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagaactcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacctct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagatctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtagagtctatgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgtgttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccagatcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaatggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgatagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaatcgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgattttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacatctctgtacaaaccaacaacgagttggttggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccactggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagcaaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagacctttactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgcagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaacactctgtgccttgtctgaagtcaccaaactgtcccctgatattgtacaggcaaactccatgttc +tcattttacggcgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaatccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccaattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttcaagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtacctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgttgtggt +ccccacttacacagcacagtacactccaaagctggggcaaattcaaattggca---------catggcagac +tgacgacct---tacagttaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacgttccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggactggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacatcca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------ac +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaagtttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +gggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205545.1/1-7487 |Norovirus GII isolate RIVM-NOV-2018-0306_R02-24 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------cc----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatgtattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgttatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagtccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaactatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggttt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaagtttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205547.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0168_R03-02 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgcttccgttgccgctgttgcc------------aacagc +a------ac----gacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccctgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaagccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgctaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacacccttaggagattgcacggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggactggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcgctattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaagcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtccctatagtgatgggggggataggtttggtgttaggatttaccaaagagaagattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccctctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcatg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacactccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccacgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaggtgccagatagtgtacaatggtggcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------aatgaccaataaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggagttggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaacttcggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctgtcaagcaaatccaggtacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgacgtgacgggcatgattctagaagagggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcagggacgc +acagttggagggcaaatgggtatgctcttaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacgtactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggcggcccctcattgcaacaggttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccattatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggtaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaggaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactctagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtggttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctagat +ggcctaacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacagagttca +attcttagacaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggatcagaaacaattttgtacaagcccctggtggagagttcacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtggtagatgttaggcaactagaacctgtactgattcccttacccgatgttaggaataatttttaccatta +caatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggtgatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaaga---tttcccattcctttggaaaagctgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtcccctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaagtcccagc +ccctctagggactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtagtaccacccaccggaatgaacctcagcagtgggtgctcccaag +ttactcaggcagg-aacact------cacaatgtgcatctggctcccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatatccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagtcaagcaggcaatgctcctagagggt +gggttctctgagacggatgcggcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctaggatcacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggagcact---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taattctc-----------ctaac------------tcttctgtcgctactt-------------------- +----------ctgttt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggggtttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205549.1/1-7496 |Norovirus GII isolate RIVM-NOV-2018-0317_R03-04 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------ctaac-gacgctaccgttgccgttgctcgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagagccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattaaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacccgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagtt +atctagcaggatgagaccagtagttgttatgatatctggtaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgagtttgagctccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggatactatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaggggcaaagttttggtggaaaaggtcaagaatacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggaggcccctaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagcttgccattgccaaggccacggaagaagacttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattaggactggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +aggccagacgtggcaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aagcctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctccgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaggatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtggatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcagagaaggcgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgactt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcagcttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggttatgttacagtggctcacactggccagcatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---tgctggggccatcaaccaaaaagttgagtttgaaaacaatagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctattgcgacctctg----------------- +-------------tgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205550.1/1-7459 |Norovirus GII isolate RIVM-NOV-2018-0335_R03-05 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaagatacc +ccc-----------------------------tcctccacctaatggtgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgttgctgggtgttagacctcaacgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgtcatgatatctggcaaaccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggggatcaaagagtcggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctgctgcacgagaggatggatgaatttgagctccaaggtc +ccacaatcaccaccttcaacttcgaccggaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagtcggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcactacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agtttatcatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagctacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaacgaaaggaagagagggccacactagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggcgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacccccaagaccgagtgtattagaagcagccaagcaaaccatcatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactagtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactacgatgcagactac +t-ctcgttgggattcaacgcaacagagggcagtactagcagcagccttggaagtcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccccagtgtggtagatgtgggagacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgtacttctcaatggaactccatcgcacattgg +ctgctaactctatgtgccttgtctgaggtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagctaaccgctaaatta +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgagaccatcccccgactttgatttcatattctt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgaccgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacaggccccagcagtgcctttgtcgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacacaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacacg----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacacctggcccccgctgtagctcccacctttccgggtg +aacaacttctcttctttagatccaccatgccc------ggatgcagcggata------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagttcggaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaggttaagcaggcaatgctcctagaggga +gggttctctgaaacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttaggg--------------atgc---------------- +------------------------------tgttcctgctcggggacccctc------------------ag +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205551.1/1-7503 |Norovirus GII isolate RIVM-NOV-2018-0361_R03-06 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------tccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggggagatataccactatggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaagccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcggatagcagcagccaggtcactagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcgtccactctcacaggggatcaaagagtcggacttataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgatcggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagtcttggtagaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tacaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattggggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggtaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaag +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggtcgtgatccg +cgcgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcacaggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcgctcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaagatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagtcaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgcagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcgggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205552.1/1-7508 |Norovirus GII isolate RIVM-NOV-2018-0367_R03-07 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccatatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagtcggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttagtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggcct +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agcggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggtgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +atacactgggagcgccgactttgctccaaaactgggtagggttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatctggcccctgctatagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccacttttccacccct--------- +ca---------------------actatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggtccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgc-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205553.1/1-7492 |Norovirus GII isolate RIVM-NOV-2018-0376_R03-08 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------c-gacgctactgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctagacccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccgccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcttgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgtaga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +tatgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccagatcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcgtccacactcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcgccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacagttggctgcagaaaataagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaagctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagctttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcgactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatctgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggatctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccattatgatgcagactac +t-ctcgttgggattcaacgcaacagagggcagtactagcagcagccttggaaatcatgg-taagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaggcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccccggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaagataat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaaccgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaactcctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagagtcttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaattcgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accaccgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------gc +ttggtcc--------tacagctggttctgggaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205554.1/1-7422 |Norovirus GII isolate RIVM-NOV-2018-0381_R03-09 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagataaaccacaa +aag---------------------cccccaaggccaccaactcccgagttgatc-------aagaggatacc +ctc-----------------------------tcctccacctaatggtgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaacatattcctatgttcattgtccacatttttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggctatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccctataca +tgatgcccttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgagaacaa +gggaaaggtttttgacagtgaggtcataataattacgacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagggttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaaacagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacttcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagcgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttccggctggg +gcttctgggtgtcac-caagcctttttataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacgtatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgaaatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-cgcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtggatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggaatcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgagacagatgtactggactagaggaccaaatcatgaagaccctaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcggggcaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagaatttacagtatcacccagaaattcccctgg +agagatcctattaaatttagagttgggaccagatttgaatccttatttggcccatctatcaaggatgtataa +tggatatgctggaggtgttgaggtgcaagtacttcttgctgggaacgcgttcacagc---gggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagtccagctcaaattactatgcttcctcattt +aattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctaccattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgttttcactgtgtcttgtagagtgttgaccaggccaacccctgattttgaattcatttacct +ggtgcctccctctgtagagtccaaaactaaaccattcacactaccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgaaaataatgttgtgcagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactatggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagttgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +accattgggcacccaagatttcagtgggatattgtatggggtgttaactcaag---ataatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtgtac---------at +atccaccactagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaacaccccc---------tttcaacaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaacaccaatttggcacctgctgttgccccgactttccctggcg +agcaattgctgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagactgtctcctacctcaagagtgggtgaaccacttttatcaagaggctgctccctccca +agcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcatag +gtcaggtttcattactgtatcacacactggcacctaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtttagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaacgccatcaatcagaaactgaattttgattataataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgctccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaagttctgtgcaaactaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------cccag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------gtcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacagcctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagattgggtgcaacaaca +aa---gggctcttagcccgtacatgc---atggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttct---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacacaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205555.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0382_R03-10 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aaa---------------------cccccgagaccatcaacccccgagttggtc-------aagagggtacc +ccc-----------------------------tcccccacctaatggtgaagaggaagaagaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagagccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagttggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactacggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtatgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttcactgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcagaaaacaagt +atggattgatggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaggggcaaagttttagtggaaaaggtcaagaatacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------ggcg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagggaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaagttcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaatccaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggtcgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aagcctccaagaccaagtgtattggaggcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacgccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctttggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttatggtgatgatgagattgtcagcaccgacataaaattggaccctgaacagttaaccgctaaattg +aaggagtatggcctgaaaccaactcgcccagacaagaccgaaggacccctgatcatcagtgaagatttgaat +gggctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccatctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcagcaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtggcgggtcaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggattaagtcccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgcagagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgtacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagaacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---cgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtacc------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcaatacttctaccaagaggcagccccagcgca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctacgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtagagtttgaaaataacagaaaatta +caacaggcatccttccaatttagcagcaatctgcaacaagcatcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaccgggtgcact---------------------------------g +tcaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctgggaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaatacgcacaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205556.1/1-7472 |Norovirus GII isolate RIVM-NOV-2018-0395_R03-11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------acgctaccgttgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggcttaacggagaggcatt +cccttacaccgcttttgataacaactgctatgccttttgttgctgggtgttagacctcaacgactcatggct +cag---caggaggatggtgcagagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattatttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagagcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcactagtccacagggctaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttac +agcttgcaccccagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggactggtggataccatgaaaattggcaatcaattaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtaaccatcaagaggtgccggatcatctacggtggttccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacatctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcatttgtcaccacgcgcatcgcacgccgcatga------acatacaagagctctggt +cgaagccacagtt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gatg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcgttctccagtaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccctaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagcgttgatt +ataatgagaaactgaactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacacct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggcggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccagaggc +aaacctccaaaaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggtacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtactggcatcagccttggaaattatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactttcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcattgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgccccatctaa---tgatggtgccgccggcctcgttccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaactttgtgcaagcacctggtggtgagtttacagtgtccccaagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagagataaacccctacttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccctaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +aatcgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcgttcaatttcct +tgtgcctcccactgtggagtcaaagacaaaacccttttccctccccatcttgactatctctgaaatgtccaa +ctctagg---ttcccagcaccaatagattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcccagccaaatctgtgcttt +caggggcgttcttaccagatcaacaagcagagccagtgaccaggccgatacagcaaccccc----------- +-----------agattat------------------------------------------------t----- +-----------ta----------------------------------attac-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------acaccacgact--------aga-----------gcacatgaagcaaagat +agacaccacatccggccgtttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgatgaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +aacagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcta--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gactcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagagtggtgattccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttggtgcagg---agctaatgctatcaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaaccatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacaccaa--------- +ac---------------------tgtgcacagatcc---------acaccaaattttaaaacgaatcag--- +gccccca----------------aatccacacctagta--------------gtgg---------------- +------------------------------ttcttcagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaag--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205557.1/1-7473 |Norovirus GII isolate RIVM-NOV-2018-0405_R03-12 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggcttaacggagaggcatt +cccttacaccgcttttgataacaactgctatgccttttgttgctgggtgttagacctcaacgactcatggct +cag---caggaggatggtgcagagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattatttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagagcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcactagtccacagggctaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacacaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttac +agcttgcaccccagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggactggtggataccatgaaaattggcaatcaattaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtaaccatcaagaggtgccggatcatctacggtggttccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacatctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcatttgtcaccacgcgcatcgcacgccgcatga------acatacaagagctctggt +cgaagccacagtt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gatg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcgttctccagtaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccctaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagcgttgatt +ataatgagaaactgaactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacacct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggcggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccagaggc +aaacctccaaaaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggtacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtactggcatcagccttggaaattatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactttcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcattgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgccccatctaa---tgatggtgccgccggcctcgttccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaactttgtgcaagcacctggtggtgagtttacagtgtccccaagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagagataaacccctacttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccctaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +aatcgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcgttcaatttcct +tgtgcctcccactgtggagtcaaagacaaaacccttttccctccccatcttgactatctctgaaatgtccaa +ctctagg---ttcccagcaccaatagattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcccagccaaatctgtgcttt +caggggcgttcttaccagatcaacaagcagagccagtgaccaggccgatacagcaaccccc----------- +-----------agattat------------------------------------------------t----- +-----------ta----------------------------------attac-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------acaccacgact--------aga-----------gcacatgaagcaaagat +agacaccacatccggccgtttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgatgaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +aacagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcta--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gactcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagagtggtgattccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttggtgcagg---agctaatgctatcaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaaccatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacaccaa--------- +ac---------------------tgtgcacagatcc---------acaccaaattttaaaacgaatcag--- +gccccca----------------aatccacacctagta--------------gtgg---------------- +------------------------------ttcttcagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaag--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205558.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0407_R03-13 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtaatt +aggtatgagg----------tcaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatgttgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagtaggatgagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccactaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctagggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagggaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtagcaaccgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatcca +cgcgtcaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgataaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcacaggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaagcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaaacattccagatacaaataccattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagatttt +aaaatcacaataaatgaagggctcccatctggcgtgccgtgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacctgatgttaggaataatttctatcatta +caatcagtcaaatgat---cccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +aggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgcagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaactcctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggcccacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccattaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcgtccttccaatttagcagcaatctgcaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccatttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205559.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0444_R03-14 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaaggaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +cgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggtctactgcatgaaaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggactgtgaccatcaagaggtgccggatcatctacggtggctccacttatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggcgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtactggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactagacaaaaccacctccagcgggcatccccat +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcgtatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacgtaaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcacttttctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacgggccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatattatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggctatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagttccaccgaattttccaactgaaggcttaagtcctagccaggtcactatgtttccccatat +aatagtagatgttaggcaattagaacctgtgctgattcccttacccgacgttaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttattcacaggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +atacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtagctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagtagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctagtctcaggg--------------atgc---------------- +------------------------------tgtcccttctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---gaggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgagcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205560.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0445_R03-15 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaatcacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaggaaggaccagccatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgttccaccactgagcttgagagaaaacaaggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtatactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaggacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccgggatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggtaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caattttgaggcctg-ttcccggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggccagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcaaggcggctttgacaagaatggtaacaccccacatgggaaaggggtaatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaattcgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttagtgaataccatgaaggttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaagctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggcgtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactgggtcgaatgctaagggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacagaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +gggctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcatggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacagtga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagctgtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgttaggaacaatttctaccatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactctctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctctcagaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacacaaa------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcactacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaacggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggtcacttttccatccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcctagtg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatcct-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggggcttgtcacctttcatga---gaggggcccataacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205561.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0454_R03-16_major nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagtcgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +cct-----------------------------tcctccacctaatggcgaagaagaacaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgcggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaagaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagtattctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggtaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaggccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacatgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------ggcg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaaccggccgtggcaagaaacacactgcattctccagcaagggcttgaacgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggacttcgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgcgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaactattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgaccatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +agtagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgc-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205563.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0461_R03-17 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagagaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgctgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagtcggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaagatcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggcgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctctttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttttcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtctgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccagctgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagttaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205564.1/1-7495 |Norovirus GII isolate RIVM-NOV-2018-0473_R03-18 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------taac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgctgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagtcggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggcgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctctttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttttcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttacccaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205565.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0482_R03-20 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgctgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagtcggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggcgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctctttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttttcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatctgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaactatgacccgacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205566.1/1-7509 |Norovirus GII isolate RIVM-NOV-2018-0506_R03-21 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaaggaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +cgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaaatagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgaaaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggactgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaagtgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagagactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggcgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggcggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtactggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactagacaaaaccacctccagcgggcatccccat +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcgtatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactagaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacggaccctctttttatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggctatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagttccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgtttccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagctgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttattcacaggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +atacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtagctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggccggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagtagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctagtcttgggg--------------atgc---------------- +------------------------------tgtcccttctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctgggaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---gaggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205568.1/1-7508 |Norovirus GII isolate RIVM-NOV-2018-0514_R03-23 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacctct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgctgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaacatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggcgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctctttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttttcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagttca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaactatgacccgacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccatttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205569.1/1-7467 |Norovirus GII isolate RIVM-NOV-2018-0521_R03-24 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------tccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggcagtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +agaagagaactccacagcattcagcgttccccccctcagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggaaatctaccactatggcttatacgtagaacgagggctggt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacaaaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctatgtgctctcgcatcattattcac +aagaccaattaaggacattatagggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggtatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatacgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaccgaattggcaatggtgagatccatcgaggacgcagt +gttagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggaaaccgggtataggaaaaacccacctagctag +agagttggcaaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgccgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatctagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatggaaaaggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagctcgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgctggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaggtctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgacgagtata +agagaatcagggaagagagaaatggcaagtattccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagctagggcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagtatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccattaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagcatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccacgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcctccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtaagaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcatcctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtgtacacaggagctctgaaagatgaactagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagatttatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagagacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtctcctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatttctgaagatttgaat +ggcctaaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaataatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcggcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccttacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaactttccagttgataatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagttaacctcccgatgcctgacgttcgcaataacttctttcacta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaattttct +tgtgccacccactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtgccaattgattctctgcataccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggtaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccttggggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaggctaaggt +agacaccacatctggccgcttcaccccaaagttaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccg------------tgaggcagactttcaacaatggaccctacccga +ttacgctggtcag-ctcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacataa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggccggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctaccgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggttcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgaccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagagactgggtcaaccaaca +aaatttcaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcgactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205570.1/1-7473 |Norovirus GII isolate RIVM-NOV-2018-0352_R04-01 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagcgggatctctggtctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggcttaacggagaggcatt +cccttacaccgcttttgataacaactgctatgccttttgttgctgggtgttagacctcaacgactcatggct +cag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattatttac +cagacccataaaagaccttataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggtaaaatgtt +gtcctcagcagcatcaacactcagagcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcactagtccacagggctaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcaccccagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgctcgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaaattggcaatcaattaaaaggagttaaaaccatggaagaacttaaacaag +caatcaggaatgtaaccatcaagaggtgtcggatcatctacggtggttccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacatctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgtatcgcacgccgcatga------acatacaagagctctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gatg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcgttctccagtaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccctaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagcgttgatt +ataatgagaagctgaactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacacct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggcggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccgttcactgaacccagaggc +aaacctccaaaaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggtacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgctgggattcaacacaacagagggcagtactggcatcagccttggaaattatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactttcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcattgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaactttgtgcaagcacctggtggtgagtttacagtgtccccaagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagagataaacccctacttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccctaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +aatcgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataccttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcgttcaatttcct +tgtgcctcccactgtggagtcaaagacaaaacccttttccctccccatcttgactatctctgaaatgtccaa +ctctagg---ttcccagcaccaatagattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcccagccaaatctgtgcttt +caggggcgttcttaccagatcaacaagcagagccagtgaccaggccgatacagcaacccct----------- +-----------agattat------------------------------------------------t----- +-----------ta----------------------------------attac-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------ataccacgact--------aga-----------gcacatgaagcaaagat +agacaccacatccggccgtttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgatgaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cataacatgaacttggccccagctgttgctcccaatttccctggtg +aacagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atctg--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gactcaagtggccctggttaggtatgttaatcctgacactggcagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagagtggtgattccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttggtgcagg---agctaatgttatcaatcaaacaattgattttgaaaataataaatatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacaccaa--------- +ac---------------------tgtgcacagatcc---------acaccaaattttaaaacgaaccag--- +gccccca----------------aatccacacctagta--------------gtgg---------------- +------------------------------ttcttcagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205571.1/1-7481 |Norovirus GII isolate RIVM-NOV-2018-0495_R04-02 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------ttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagagaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccactgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgctgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagtcggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggtatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggcgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctctttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttttcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatcctcac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatctgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaactatgacccgacagaagaaatcccagc +ccctctagggactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagcaacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagttttggattggagcggg +acaaggtactgggctccagatgctagggttacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggatttgtctcctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205572.1/1-7487 |Norovirus GII isolate RIVM-NOV-2018-0440_R04-03 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aataac +a------ac----agcgacaacgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaaccgcct-cccccgagggaaataccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagctaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcctgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcgtacaagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaattaagagttgtcagatagtgtacggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacactatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctatggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcctaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggccaaatgggcatgctcctaactggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagatcaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccggaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaactgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagcgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctggttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttctttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttca---aggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcgttac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205573.1/1-7478 |Norovirus GII isolate RIVM-NOV-2019-0027_R04-04 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcaagc------------aacggc +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggctaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggggagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagctaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaagccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggctatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcggatagcagcagccaggtcactagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaagactcatctggccag +ggaggtggcgagaaaggtagcgtccactctcacaggggatcaaagagtcggacttataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaacccggccccacttgattatgt +caactttgaggcctg-ttctaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gtaagggcaaagtcttggtagaaaaggtcaagaatacctctgtacagaccaacaacgagttggccggggccc +tacaccatctcaaacacgcccgaatcaggtactatgtcaaatgcgtgcaagaagcaatctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatccaaatga--------atcagaggctaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattggggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggtaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagatttccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaag +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattagaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcacaggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacctgatgttaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgcagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctc-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205574.1/1-7498 |Norovirus GII isolate RIVM-NOV-2018-0343_R04-05 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------tccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggggagatataccactatggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaagccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcggatagcagcagccaggtcactagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcgtccactctcacaggggatcaaagagtcggacttataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgatcggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagtcttggtagaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tacaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattggggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggtaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaag +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggtcgtgatccg +cgcgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcacaggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcgctcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaagatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgcagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcgggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205576.1/1-7466 |Norovirus GII isolate RIVM-NOV-2018-0416_R04-07 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------acgcttccgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagaattggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaatcatt +tcttacaacg----------tcaa---agagggtgtttctggtttacctgaactctcaactgttacccaact +ggaagagagctctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaactatcctggagatgtgggacggggagatttaccattatggcttatacgtggaacgagggttggt +actaggtgtacacaaaccaccagcagccatcagccttgccaaggttgagttgacccccttgtctttgtattg +gaggccagtgtacaccccac---agtacctcatttcccccgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgctatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggtatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggaccttgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaaattggt +catgaaatggtttttcccaaagaaagaagagaaaaatgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagcctcgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccgttctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +ggagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgatcactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcaggctccaggaactcgccgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggcaaagtcttcgacagtgacgccataataataaccaccaatttggccaacccagcgccactggactacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgaaaaggcta +aacgggacttcccaggccagccagacatgtggaaagacacctttaaacctgacttctcacacataaaactga +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggcgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcaggactcctccacgagagactagacgagtatgagctgcagggac +cagctcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgtcgacacaatgagggtcgggtcacagctcaagaatgtcaaaaccatgacagaactcaagcaag +ccctcaaaaacatctcagtaaaaaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tacaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggccgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctttggt +ccaaaccacaagcagaagacctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-gat----gaagagg---agtttgttatctcctctgatgacatcaaaactgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttaggccaacaaggaaacaacgcaaagaggaaagagcctctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaaggaaaattatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcggggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcacaagtcgggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcttggaagaaggtgctccagaaggcactgttgctacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggacttgggtacaacccct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtagtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcctccaccacccccctgccacccggaacttatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcctagaggc +aagccacctaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtgtacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaattaagaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgtgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagttctagctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaattaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacattaaactggacccagagaaattaacagcaaaattg +aaggagtacgggctaaaaccaacccgccctgacaaaacggaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgacccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatatactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattactgggtgaagctgcgttgcatggtccatcattttacagtagaatc +agcaaactagttatttcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagcctgtggcgggtgcagcgatagcggctcccctcaccggtcagcaaaatataattga +tccctggattatgaataattttgtacaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gatcgtggacgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgttaactagacctagtcctgatttctcattcaattttct +tgtgccacctactgtggagtcaaagataaaacccttttccctccctattctgactatctctgaaatgtccaa +ctcgagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgtccagtgtca +gaatgggcgcgtcacccttgatggtgagttgatgggcactacccaactcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcatcagat----------- +-----------caacaagtagg------gccagtgatcaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaggatataccagg +ccccttggggacaccagattttaggggcaaagtctttggcgtagccagccaga---gaaa------------ +-----tc------------ctgatgctacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcaccccaaagttgggctcattagagatttcc------------actgaatc +tgatgattt---tgaccaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggtcgacca------------tgaagcagattttcaacaatggaccctccccga +ctactctggccag-ttcacc------cacaacatgaacttggctccagctgttgcccccaacttccctggtg +agcaactccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctagtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatatcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attgggtttcataactatagccaagaatggtgactctccaataactgtccctccaaatggatactttagatt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggggcttttatagcaggattggctggtgacatgttcacaaacactgtg +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaatagattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggaaatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgccatcaaacaaggggttttgaccgctggc +ggcttctcccctgctgatgcagcccgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +aa-------------ctgtgcacaggtccacaccaaat---------------------------------t +ttaaaac----------------gaatcaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcgcactcgtccgagtcgtctcgatcca--------------g +cgggtcta--------------------------------------tcagatcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttctaa---------------------------------------caggactagggactgggtcattcaaca +aaattttaatttggaaccacatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaaccgtgcctaa +aaatgttttgga-ctcctggtcatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205577.1/1-7495 |Norovirus GII isolate RIVM-NOV-2018-0419_R04-08 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaaggccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattacggcttatacgtagaacgagggttagt +gcttggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttaaacgattcatggct +gaa---cagaaggatggtacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattgat +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcttacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgacgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ccgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaaaaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcatcatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaggctctctactccatattgc +aaattgccggggccgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------ggctaacaacgaggaaggttgtccaaaacctaaa-- +-aat----gatgaag---aattcgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatatctacaggacagggacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggcaccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctacttacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtgggggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaacaaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccaggggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagat +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgactgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtgtacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagagttggtatg +aacatgaatgaggatggacccataatatttgagaaacactctagatataaataccactatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagacctcttgtctcccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttctatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactaacatcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaac +ggcctaaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtattggactaaggggccaaaccatgaagacccttttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttattaatttggaactgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgataatttaagtgcagcacaaatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataccttctttcacta +taaccaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctgtcctgactatctctgaaatgtctaa +ttctaga---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaacttttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgaccctgcagaagatataccagg +tcccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagttgggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaaaccaaccaacaa---------------------------ggttcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatgggccctacctga +ttacgctggtcag-ttcaca------cacaacatgaacttagctccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgatactggtagagtgttatttgaggctaagttacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaagcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgactgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaggtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcatagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacctacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------aa------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccgcacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205578.1/1-7491 |Norovirus GII isolate RIVM-NOV-2018-0420_R04-09 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaaggccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattacggcttatacgtagaacgagggttagt +gcttggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttaaacgattcatggct +gaa---cagaaggatggtacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattgat +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcttacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgacgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ccgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaaaaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcatcatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaggctctctactccatattgc +aaattgccggggccgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------ggctaacaacgaggaaggttgtccaaaacctaaa-- +-aat----gatgaag---aattcgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatatctacaggacagggacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggcaccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctacttacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtgggggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaacaaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccaggggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagat +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgactgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtgtacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagagttggtatg +aacatgaatgaggatggacccataatatttgagaaacactctagatataaataccactatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagacctcttgtctcccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttctatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactaacatcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaac +ggcctaaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtattggactaaggggccaaaccatgaagacccttttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctggagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgataatttaagtgcagcacaaatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataccttctttcacta +taaccaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctgtcctgactatctctgagatgtctaa +ttctaga---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaacttttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgaccctgcagaagatataccagg +tcccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagttgggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaaaccaaccaacaa---------------------------ggttcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatgggccctacctga +ttacgctggtcag-ttcaca------cacaacatgaacttagctccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgatactggtagagtgttatttgaggctaagttacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaagcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgactgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaggtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcatagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacctacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------aa------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccgcacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205579.1/1-7509 |Norovirus GII isolate RIVM-NOV-2018-0493_R04-11 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcccaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagattcc +tcc-----------------------------tcccccacccaacgg------ggaggatggactagtggtt +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccagagggagagcagggacgccaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +actcggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactgttcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacgtgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtacatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctta +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaattttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaggtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgacgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattggtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaacgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacacacaatgcaggccgcttttccatcccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtcttgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205580.1/1-7513 |Norovirus GII isolate RIVM-NOV-2018-0511_R04-12 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcaaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +agacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgagactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattgtttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaggacctcgccgttga +actcgtacctgtggtaatgggagggattggcctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgtcggatcatttacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacccgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagaaagggccacattagggttagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagtctgttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +aggccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacaaggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaactaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcttaccttggtggtcgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggt +aaacctccaagaccaagtgtactggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaagatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagttagtcaag +actgagaaaatctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaagctg +aaggagtacggcctgaaaccaacccgaccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgcgacccagctggctggtttgggaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtctcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccgca +aaatggcagatgcacaactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccaccttcccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaacccagatacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcatgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacttgcaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggccaccaaaagactacaacaggaaatgatgaaagttaagcaggcagtgctcttagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatacaggccgcttctccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagataacctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactgtctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcaagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacccttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205582.1/1-7513 |Norovirus GII isolate RIVM-NOV-2018-0537_R04-14 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaatcacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaggaaggaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgttccaccactgagcttgagggaaaacaaggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtatactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaggacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccgggatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggtaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caattttgaggcctg-ttcccggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggccagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcaaggcggctttgacaagaatggtaacaccccacatgggaaaggggtaatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaattcgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttagtgaataccatgaaggttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaagctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggcgtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactgggtcgaatgctaagggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccatcttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacagaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +gggctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcatggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacagtga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagctgtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgttaggaacaatttctaccatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactctctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctctcagaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacacaaa------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcactacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggtaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggtcacttttccatccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcctagtg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatcct-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagggacttgtcacctttcatga---gaggggcccataacatatcatttgttaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205583.1/1-7445 |Norovirus GII isolate RIVM-NOV-2018-0391_R04-17 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------------------------------------gc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgttatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatggtacaaaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattattcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacctttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctgggcaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatacgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctgctcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +atcaagcaggccccgaccggttgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgatgtcataataataaccaccaatttagccaacccagcaccactggattacgt +caactttgaagcttg-ttcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacactttcaaacccgacttctcacatataaaattgg +cattggccccgcagggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaacttaagcagg +ccctcaagaacatctcagtcaagaaatgtcagctcgtgtacggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatattac +aaattgccggggctgcattcataactacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaagcctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtattccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagagcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttcccttggtttggttacaggctctgaaa +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggattgttgact +acaatgagaaacttagtttcgaggctccaccaagtatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaactcatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgagaattcagggtcgc +actgttggtggacagatgggcatgctactcacaggatctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgcccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctggaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtgtacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccaggtacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggcgatttt +aggatttcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcgtccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaagttagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatggagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaagatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaggtccttcttaatttagaattgggcccagaaataaacccttacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccagttgacaatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcacta +taaccaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgacttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcatgtttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttttatcaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttagtgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgatatgattgctatcaagcaaggggtcttgactgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgacgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccagtctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgaccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagagactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205584.1/1-7505 |Norovirus GII isolate RIVM-NOV-2018-0479_R04-18 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagagccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---agtacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattaaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +cgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctcctgcatgagaggatggatgagtttgagctccagggcc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggatactatgaaaattggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaggaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaataccttcaagacagagacaggtac---t +atgaggagcttgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattaggactggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcat-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtggcagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggtcgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttggggacaacccct +ggtgactgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +catgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtggatgtgggagacttt +aaaatcacaataaatgaggggctcccatctggtgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggcgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacttatcccatttggccagaatgtacaa +tggctatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagttccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaacaaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccacccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgactt---tgaagctaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcagcttctcttcttcagatccaccataccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagagttttgtttgagtgcaagcttcacaa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaatcagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcagtgctgg---tgctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctgcagcaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaagccaccaaaaagctacagcaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgctcggggaccctcc------------------aa +caaatctt-----------ctaat------------tcttctattgccacctctg----------------- +-------------tgt-----attcaaacca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacat---atttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctag +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP205585.1/1-7490 |Norovirus GII isolate RIVM-NOV-2018-0522_R04-22 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggcagtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +agaagagaactccacagcattcagcgttccccccctcagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggaaatctaccactatggcttatacgtagaacgagggctggt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacaaaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattattcac +aagaccaattaaggacattatagggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggtatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatacgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaccgaattggcaatggtgagatccatcgaggacgcagt +gttagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggaaaccgggtataggaaaaacccacctagctag +agagttggcaaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgccgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatctagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatggaaaaggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagctcgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgctggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaggtctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgacgagtata +agagaatcagggaagagagaaatggcaagtattccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagctagggcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagtatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccattaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagcatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccacgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcctccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtaagaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcatcctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtgtacacaggagctctgaaagatgaactagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagatttatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagagacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtctcctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatttctgaagatttgaat +ggcctaaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaataatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcggcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccttacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaactttccagttgataatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagttaacctcccgatgcctgacgttcgcaataacttctttcacta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaattttct +tgtgccacccactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtgccaattgattctctgcataccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggtaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccttggggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaggctaaggt +agacaccacatctggccgcttcaccccaaagttaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccg------------tgaggcagactttcaacaatggaccctacccga +ttacgctggtcag-ctcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacataa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggccggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctaccgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggttcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgaccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagagactgggtcaaccaaca +aaatttcaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcgactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084256.1/1-7502 |Norovirus GII isolate 2018-827 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaataggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------attagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaaaagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacataatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcaggttcaggcaaccaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtcct-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtg--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084257.1/1-7516 |Norovirus GII isolate 2018-875 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aaccggtacaatcattgaaatgtgggacggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagagaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgattttctcgtgtacgctgaagcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgttggctccacaggggggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaataatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagggaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaagtcaggtgaattctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattttagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccacacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtagcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaacgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctccgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccgtacaattgatgtctttgctgggcgaggctgcactccacggcccagcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttt--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084258.1/1-7516 |Norovirus GII isolate 2018-1000 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaggatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaatcaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccgccagcagccattagcctcgccaaggtcgagctggcaccactctctttgttctg +gagacctgtatatacccccc---agtacctaatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacttgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatcaatcgaggatgcagt +actagacctcgaggcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatctggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccaacgtgtgggccttattccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacatgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +aacgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacatataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgagctagctggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcagtgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaagtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcgtccgacgacatcaaaactgagggcaagaaagggaagaaca +agaccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagctcttc +ggagttcctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaaaagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaagggggtgac +agtaaagggacatactgtggtgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggaaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggattcaacacaacaaagggacgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagatctcctctcccctagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +cttctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcatacaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatctggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtggatgttagacaactagatcctgtattgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcttgccgagttctcacgagaccatcccctgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacaactgatggtgtactcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaaccccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttggaa---------ctgacacaga +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactccttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctactaaaaggttacagcaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcctagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084259.1/1-7516 |Norovirus GII isolate 2018-877 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggaaccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtaccttatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgctccctagtacatcgggcgaaagaagagct +ctccagcaggctgagacctgttgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggctaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtcgaagacacagaaga--------gatggccaataaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctggaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggtgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgcgtcacactccctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactatctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggttcggaaaattggaacaaagttca +atccttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagaattcacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatctaaatccctacttatatcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgctgcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaacgac---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccgca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacacaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaaattgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacacgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacctacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgtt---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcatct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084260.1/1-7513 |Norovirus GII isolate 2017-758 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +agg---------------------cccccgcgaccacccacaccagaattggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggatgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtaccttatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtacatcgggcgaaagaagagct +ctccagcaggctgagacctgttgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctccccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaataaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggtgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgcgtcacactccctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactatctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +atccttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggttattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcctgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaacctttttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacacaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtagctcccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacctacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgttactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagctccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084261.1/1-7516 |Norovirus GII isolate 2017-732 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtattttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactacctgaactcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctcaccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactagaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaactaaatctgcttcacccgatattgt +gggcacaatcaactcccttctggcaagaatcgctgctgcacgctccctagtacatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctgagatgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaactcatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccaaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgagccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctgaagccattcacagaacccaggggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgttcgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatacagatatcactatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacttgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctccgtcccagttttaaccgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cccaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgc-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084262.1/1-7517 |Norovirus GII isolate 2017-44 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacccgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaggaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatcctcaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggttagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaatccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgatgtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatgggaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagctctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagacggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgaggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattacagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcactcaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttcttttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcgggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaaattaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtacctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084263.1/1-7516 |Norovirus GII isolate 2017-756 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR084264.1/1-7517 |Norovirus GII isolate 2017-759 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OR062612.1/1-7561 |Norovirus GII isolate Hu/NI/2017/GII.17[P17]/NIC4691, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtccgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaataaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcactaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctagaatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctaaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaataccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaatttgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggtaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtgggggcgc +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acgtatcaaacctctggt +cgaagccacccatcgaggagagtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----ggagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaggatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacttatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttggggcctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggcacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggtccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaagatttacggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaactgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgacttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaactctattgcccactgg +ttacttactttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaggaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacttgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattctattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattctttcatta +tagtaatcagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcccgactttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------accacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcaggtctttcgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgacacgggacgcacactgtttgaagcaaaattgcacag +atctggttatattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaaga---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------caggacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgc---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>OR039448.1/1-7420 |Norovirus GII isolate stool nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------ctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcaccgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagtgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-ctcggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattctatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaactggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttggaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcgggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ633109.1/1-6759 |MAG: Norovirus GII.2 isolate MH10con1 nonstructural polyprotein gene, partial cds; and VP1 protein gene, complete cds +---------------------------------------gttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +tcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgattg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaagaact +atctagtaggataaggccagtagtcgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcgcggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcactacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgaggggcccctgattatcagtgaagatttgaac +ggtcttactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgattccccattcc +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctacttaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +ctttgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaacctgcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgct--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ633110.1/1-6525 |MAG: Norovirus GII.3 isolate MH17con4 nonstructural polyprotein gene, partial cds; and VP1 protein gene, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------gg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctagcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgtcgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatgggatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggccaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcttcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggactgctggacacaatgagagttggaaaacagctcaagggtgttaagaccatgtcagagctcaaacagg +cactcaaaaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccacagtgcagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgttaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgccccaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacagatat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +ataatgagaaactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaagtcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactgggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgct +gcccgtggaggaaacactatcatttgtgccacccaagggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggcccaggaaatgccccaaaactcagcaccaagactaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctggaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagattaaaaagaggcttctctggggttcggatctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcactatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaatctgtcccctgatattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgataaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcgctccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggagttgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaacaatttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggagatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaatttcct +tgtaccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtaccgattgattctctgcacaccagcccaactgagaatattgttgtccaatgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattttagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +gttaggttttatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagca--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ702253.1/1-7507 |Norovirus GII isolate 22GZ10387_GII.6-GII.P7 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agttttaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactactccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaattagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccggacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttaggcaaacttaaaccattgaacttgttgcacttgctcgcgtcatgtgattg +gacgtttgcgggcatagtggagacagttatcctaatggcagaacttttc---aacatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaggaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatctcacaaccctcctcaaagataaggatagcctcacggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggtactatcaatgccatactggccagaatagctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccagcctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggaatcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctgttgacaaagttgagggccaaacgtcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactctaatgc +aggttgccggagcgtcattcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagaggtgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcacaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaagaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagaggagaccagatgatttccaaccaaagggcaaactgtgggcagacgataccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtgtggagagttttgcaggttcagattcccaagaccaatc +aggccagatgccacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccaaatgggaatgctcctcacaggggctaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgcccttatatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaataccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgtcaag +actgacaaaatctacaaaaagataaagaagaggctcttatgggggtcggatcttggtacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgcagggtaggaatg +aacatgaacgaagatggtcccatcatatttgacaagcactctaagtacaggtatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaggtggttgcagaggaccttctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtgtcaggtctctcaccagatgtagttcaagcccactcctgtttc +tcattttacggtgacgatgagatcgtcagcactgacataaaccttgatcccatgaagttgacacagaaactc +agggaatatggtctggcccccacccggcctgataaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattggaccaggactca +atcctcaggcagttatattggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaagcctcactacatggcccccagttctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgactgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaacttaacccttacctaagtcatttgtcccgcatgtacaa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgaggcaacttgaaccagtacttttgcccctccctgacataaggaacaggttcttccatta +caatcaggaagacacc---ccccggatgaggcttgtggcaatgctttatactcccctgagggc---taattc +tggtgaagatgtgtttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgagggggttgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcaaactaattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattagagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +aacccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----cc---aagtgggg---------gcaacc--------cga-----------gcccatgaggtgcacat +taacacgaccgatcccaggtatacaccaaaactggggtccatcctcat---gt---------actcagagtc +gctagactt---tgagactggacagccggtcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgattggcaccagtgggagctgcctga +ctactctggacgc-ctgacc------ctgaacatgaatcttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------tgggt--------- +--ctggacagatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaagctgcatag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtatttcaggtt +tgaagcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtttcagcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------gatcctctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctctccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ctagatc----a---tccag-------------------gcccactaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---acggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggca---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ702254.1/1-7516 |Norovirus GII isolate 23GZ03005_GII.6-GII.P7 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agttttaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactactccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaattagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccggacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctattaggcaaacttaaaccattgaacttgttgcacttgctcgcgtcatgtgattg +gacgtttgcgggcatagtggagacagttatcctaatggcagaacttttc---aacatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatctcacaaccctcctcaaagataaggatagcctcacggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggtactatcaatgccatactggccagaatagctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccagcctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggaatcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctgttgacaaagttgagggccaaacgtcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactctaatgc +aggttgccggagcgtcattcgttgtca---------------gcagga------tttctaagaggttctgtt +gggagagatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcacaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaagaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagaggagaccagatgatttccaaccaaagggcaaactgtgggcagacgataccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggggtcgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccaaatgggaatgctcctcacaggggctaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgcccttatatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaataccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggtacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagctctcccatgcagggtaggaatg +aacatgaacgaagatggtcccatcatatttgacaagcactctaagtacaggtatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaggtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtatcaggtctctcaccagatgtagttcaagcccactcctgtttc +tcattttacggtgacgacgagatcgtcagcactgacataaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggcccccacccggcctgataaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattggaccaggactca +atcctcaggcagttatattggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaagcctcactgcatggcccccagttctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgactgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattagatcttgaattaggcccagaacttaacccttacctaagtcatttgtcccgcatgtacaa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgaggcaacttgaaccagtacttttgcccctccctgacataaggaacaggttcttccatta +caatcaggaagacacc---ccccggatgaggcttgtggcaatgctttatactcccctgagggc---taattc +tggtgaagatgtgtttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgagggggttgtggtccagccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcaaactaattggccag--------- +----------acatcaaggtctccagactc----------------------------aaactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattagagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +aacccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----cc---aagtgggg---------gcaacc--------cga-----------gcccatgaggtgcacat +taacacgaccgatcctaggtatacaccaaaactggggtccatcctcat---gt---------actcagagtc +gctagactt---tgagactggacagccggtcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgattggcaccagtgggagctgcctga +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------tgggt--------- +--ctggacagatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaagctgcatag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtatttcaggtt +tgaagcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtttcagcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctctccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ctagatc----a---tccag-------------------gcccactaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---acggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ682536.1/1-7461 |Norovirus GII isolate 23GZ03002.GII.20[P7] nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtccaac-gacgctaccactgcccttggcagtcaa---aaatctgtcaat +g------ac----agtaataatgccacccctcctgacaaggaggagat------tggcacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgttcccaaaggtacc-------------aaagcaccc +agcagtga----------------tcagcatcgccccacagttaagatcggacccaaaacattaataatccc +ccc-----------------------------cgaacccccaaacgg------tgaggac------accgta +caatttgacg----------caaagtcagaaactataattggactaccggacttgacaacggt---gcaaaa +tgaacacgaaaatactccatacactgtccccccattaagtgagagggagcacaggccggccactgaaccact +tcctggtacaatattggagatgtgggatggtgagttctaccattactccgtgtacgtcagcgatggcaaagc +tctgggggttcacaaaccaccagcggctataagtctcgcgacgatagagctcacccccatatcactctactg +gagacccgtttataccccca---actatttggtctccccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttataacttctgttgttgggtgcttgagctcaacgacacttggct +taa---cagaagatgcatctccagaaccaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactgtcgatgatggaaagattaaaaaggtggccaacgcgatcctctgtgcactcggttcgctgttctc +aaaaccaatcaaagatctgttaggcaaactcaagccattgaatctgctgcacttgctcgcatcttgtgattg +gacatttgcgggcatagtggagacagtcatcctaatggcagagcttttc---aatgtcttctggactccacc +agacgtgtccaattttatagcctccttgataggtgattttgaattacaagggcctgaagatctggctgtgga +gctcgttcctgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +cgtgaaatggttcttcccaaagaaggaggagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccacctcacaaccctcctcaaggacaaagacagcctcacagcttt +catgaaaaccctggatttagaagaggagaaggcaaggaaactgtccactaaatcatcttcgccggacatagt +cggcaccattaacgccatactagctaggatagccgctgctaggtccctactacacaaggccaaagaggagat +gttcagcagaatcagaccagtagtcgtcatgatctcaggcagacctggcattggaaaaacccatatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccacgcaatggtgt +cgatcactgggacgcttacaggggagagagagtggtcttgtgggatgactacggtatggggagccccattaa +agacgccctgacactgcaagaattggccgacacgtgtccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgatagtgacgttattataatcacaaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcatg-ttccaggagagttgacttcctagtctatgcagagtcaccagaaattgagaaggtca +agagagatttccctggccagcctgacatgtggaaagatcatttcaagccagacttttcccacattaagctga +ctctagccccccagggtggtttcgacaagaatggcaacaccccacacggcaagggcactatgcggtccttga +cccaggggtccttaactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgaccttcaaacatacaattttgacaccaacaaagtctccgcatttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcacagcactcaaaagtgtgaaaaccttggaagatctcaaagttg +cattgagagatgtaaaattcaatgagtgtgaaataatctacaagagctccaagtaccgagtctcttccaacg +gtaaaggctcagtctctgttgacaaagttgaagacaacacttcccagactgtgaatgaagtacactcagcac +tcctcagactcagacaggcgagggccagatactacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtca---------------gtagga------tctccagaaggttctgct +gggaaaggtgggttaaacctaccgagac-------------ccaggaggtgagtgagcccga-----aaagg +aaacggcccaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaagggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgacgaagagtacgacgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgggaccgctat---t +atgaagaagtagcagttgctcgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +ggatcttccgcccgacaaggaaacagaggaaggaggagagaggcgtgctcggcttggtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcggatgacaccagaagtgtggact +acaacgaaaggcttgattttgaggcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttttgatcacaacaacacacgtcctgcccaaggggatcacagaacttttt +ggggttgaaattaaacagatccaagttcacaagtctggagagttctgcagattcagattcccaagaccaatc +aggccagatgtcactggactcgtgttagaggaaggtgctccagaaggcactgtttgctccatactcgtaaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtccc +ggtgactgcggatgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gctcggggaggcaacactgttatatgtgccacccaagggcaggatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttggggccaggcaaggcgcccaaactcagcacaaagaccaaa +ttctggcgttcatcaccagatgctttgccgccaggcacttatgagcccgcctatctgggaggcaaggatcct +agagtggaaaagggaccatccctgcaacaagttatgagggaccagctaaaacctttcacagaacccagagga +aagccacctaggccagcagtcttagaagaagccaagaagacagtgatgaatgtcctagaacagaccatcgat +cctgctaaaccgtggacctattctcaagcatgtgcctcactggataagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccactggaatggagagtccttcaccggccccctcgcagaccaggcgtccaaagct +aacctcatgtatgagcaagctaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaaaaggctcttgtgggggtcagatcttggcacgatgatcaggtgc +gctagggcatttggtggtctcatggatagcatgaaggcaagttgtatagccctcccatgtagggtgggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactccaagtacaggtaccactatgatgctgattat +t-ccaggtgggattcaacccagcaaaggagcatcctctcagccgctatggaggtgatgg-tgcggttttctg +ccgagccggaact-ggcacaagtggttgcagaggacctcctggcacccagccagctagacgttggtgatttt +gtcatctcagtccaagagggtctgccatcaggggtcccatgcacatcacagtggaactcaatagcacattgg +atcctaaccctgagtgcgatggcagaagtgtcaggtctctcaccagatgtcgtccaagcccactcctgcttc +tcattttatggcgacgatgaaatcgtcagcactgatatcaatcttgaccccatgaaattgacacagaaactc +agggagtatggcctagtccccacccgacccgataagactgaaggcccccttgtaataactgaagacctcact +ggcttaacgttcctgcgcaggtcgattgcgcgagacccggccgggtggtttggaaaattggaccaagactca +atcctcagacagctatattggacaagaggccccaatcacgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttcttggcgaggcttcactgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgaaatcaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctaatccgtccag---tgacggatcagccaacctcgtcccagagatcagtaatga +ggttatggcccttgaaccagtagctggtgctgctattgctgccccggttgctggacaacaaaacataataga +tccctggattagacaaaattttgtacaggcccctggtggtgagttcactgtttcaccaagaaacgccccggg +ggaagtacttctaaatttgcccttgagccctgacatcaatccatatttggcccatttgtccagaatgtacaa +cggttatgctggaggcgtggaggtggaggtggtcctcgccgggaatgcgttcacggc---gggaaaaatcat +cttcgctgcagtgccaccaaatttccctcctgaaaaccttagcccaagccaaataacaatgttgccccacat +catagttgatgtcagacaattggagccagtgcgcatacctttaccagatgtgcgcaacaatttctatcacta +ttctagagaaaatgat---tccacattgagattgattgcaatgttgtacactcccctcagggccaacaatgc +tggtgatgatgtgttcactgtctcttgtagagtgttgacaaggccatctcccgactttgacttcatatttct +ggtgccacccacagttgaatctaagtctaaacccttcaccattccaatgctcaccattgaggagatgactaa +ttctagg---tttcctgcaccattagagctgatgactacagggccgagtcacgacattgttgtgcagccaca +gaacggacgctgcaccatcgatggtgtgctactcggcaccacacagctgtccccagtcaacatttgctcctt +gagag-----------------------------------------gcatccccaccaagcgaa-------- +---------ccaatggaaatga-----------------------------------caactgttttg---- +------------------------------------------------------------------------ +-----------------tgcaacttgaaaaccctaacggttcagcttatgatccaacagaagacatacctgc +tgttctagggtcacctgattttgtgggagagctctacgggacgatcactcaga---ggagctc--------- +---------------gga-----taactcaact--------agg-----------gcccaccctttcaccct +caacactggaagccctaggtacactcccaaaattggctcagtggacattcgcg---------tcacagacgt +tagtgacct---tcaggaccatgacccagtga---------------------------aacttactccag- +--------ttggcctctctgggg---acagt------------ggttcagtccatcagtggcaacttccaaa +ttattcaggggtg-gcaacc------cacaacatgcatctggccccatccgttgctccattgtttcccggtg +aacagatccttttcttccggtccacagtccccg------ggtgtggtggtta------tccaa--------- +--actcaaacatcgattgcttgatacctcaagaatgggtccaacatttctatcaggagggtgctccagcccg +tacggatgtggccttgcttagattcgtaaaccctgacacgggcagagtgctctttgagtgcaaattacacaa +acatggctttatcactgtggcttactctggaaatcatgatttggttatgcccccaaatggttactttagatt +tgaatcttgggtgaatcaatttcacactcttgcccccatgggaacaggctcgggcagaagg---------ag +ggtcc---------agtaatggcaggagcttttctagcaaatttggccggtggcgtagcatcgaacgggatt +agttcgctaatcaacgcagg---tgctaacgctatcaatcaaaaagttgagtatgattttaataaacaa--- +------------------------------ctccagagcgcatcattcgctcacgacaaagagatgctccag +gcacaaatccaggcaacaacccagcttcaacgtgacatgatggccatcaagcaagagatgttgaccgctggc +ggcttctctcaagctgatgcagccaggggctcagttggagcaccaatgacaaagctgatagactggagtgga +acaagatattgggcaccaaattccatgagaacaacaggttattctgggaccttcaccagccaagccccctca +ca-----------gtttaccccttactcta----------aagg---------------------------a +tcaggcaa--------------gcagccacttt--------------------------------------- +---------------------------------------ctaaagcagtgccgcct--------------tc +agtttcct-----------ctgg---------------ttcttctgtgagctctc----------------- +---------------------tgagaacgca---atcaacttctttgccatc-taatcgaac--------tg +tg-----------------------------------------ataacacaat---------catcagactc +ctcctc-------------------accc--------tctcggtctagaacatcagattgggtgcgcagcca +aaatgaaatgatgagcccattcatgg---acggggcactccacacagctttcgtgtcccctccgtcgagtag +ggcttct---agtt------------------------------ctggca---cagtctcaaccgtgccaaa +gggagttttgga-ctcctggactcctatgt------------ttaacacgcataggcagccactcttcgccc +atctacgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-t------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP805360.1/1-7497 |Norovirus GII isolate 187601 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtccaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggacggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctatctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgctatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accgaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgagaactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgctttattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagactcatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacatcaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaacgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgtatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagagaaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatctttcgacccactaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtctctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaagatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccctattttgggacctggcaatgcaccaaaattgagtacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggcgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacacttcctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgagcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctctctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgccaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgtatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccattgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccggc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccatccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP805361.1/1-7497 |Norovirus GII isolate 187865 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtccaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggacggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctatctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgctatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accgaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgagaactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgctttattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagactcatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacatcaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaacgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgtatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagagaaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatctttcgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtctctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaagatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccctattttgggacctggcaatgcaccaaaattgagtacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggcgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacacttcctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgagcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctctctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgccaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgtatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccattgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccggc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccatccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtctcagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP805362.1/1-7451 |Norovirus GII isolate 446222 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------gacgcttccgtcgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggtctaaacagccg-cccccgggagaaacaaaacaa +acacaaag---------------accaccaaggccaccgacaccggaattggtg-------aagaagatacc +ccc-----------------------------acccccccccaatgg------tgaggatgaaccaaagata +gcgtataagg----------tggg---agaaggtgtgtctgggctgcccgacttgacaaccgtggcacaacc +tgacgcacagaacacagcctacagtgtccccccacttagccagagagaggccggcgaagctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actgggagtgcacaagccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtttacactcccc---aatatttgatagctccagagacccttaagaatttaaatggagaggcttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggttttagacctcaacgactcctggct +tag---cagaagaatgatccaaagaacaactggattcttcagaccgtatcaggactggaacagaaaaccctt +gccaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +taggcccatcaaagacgtcattggaaagctcaaaccactgaacattatgaacatactggcaacttgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgagctcttt---ggggtgttctggacgccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacactcagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgagttagccatggtgagggccattgaggatgcagt +tctggatttggaggcaatagaaaacaaccacatgaccactctccttaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaaggaaactgtcatccaaatcggcgtcacctgacatcgt +gggcacagtaaacgcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagaggcctgttgttgtaatgatatcaggtaggccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagcgggtggttctgtgggatgactatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataattataacaaccaacctcgcaaacccagcaccactggattatgt +caactttgaggcttg-ttctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagatcagacttctcacacattaaacttc +agctggcaccacagggaggctttgataagaatggcaacaccccacatggcaaaggtgtggttaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccatgagagaatggatgaatttgagctccaaggct +ctgatttaccaaccttcaatttcgaccgtaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaagcagg +ctataaagaacatcaccatcaagaagtgccagatagtgtacaatggatgcacctacaccgtggaatctgatg +ggaggaacaaggttgtggttgaaaaggttcaaaatgcaacagtccaaaccaacaatgaacttacaggagcac +tccaccacctgagatctgcaaggataaggtattatgttaaatgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcaccacacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgatga--------gcctgaagacaaagaggggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaagacattaaagcagaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggaggagaggaatggcaaatactcaattgaagaatacctccaggacagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccggcccaccaggaagcaacggagagaggaaagagccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaagccaaaaggaaaactttgggctgatgacaacagaagtgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggtacaggatggg +gattctgggtctccc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggctttt +ggagttcccattaaccaaattcaaattcacaaatctggagagttttgccgcttgcggtttccaaaaccaatc +aggccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggaactgatgcctctcgcagttagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcaaatgggcatgcttctcactggctcaaacgctaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggcgaagccaccctcgaaggaggtgac +aacaagggcacctattgtggggcccccatcttgggacctggcaacgcaccaaaattaagcacaaaaacaaaa +ttctggagatcttccaacgcgccgcttcctccaggtacctatgaaccagcataccttggtggaaaagacccg +cgtgtgaagggaggcccatctctacaacaggttatgagagaccaacttaaaccttttacagagccaagaggg +aagccaccaaaaccaagtgtcctagaatcagcaaagaagaccatcattaatgttctggagcaaaccattgac +ccccctgaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aaccttatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggctctgacctatctaccatgattcgatgc +gccagggcatttggtggcctcatggatgagctcaaagcaaattgtatcacactccctgtcagagttggtatg +aacatgaatgaagatggtcccataatatttgagaagcactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagtt-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaattgttatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtaacaggactaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaaattgactgcaaaactc +aaagaatatggtcttaaacccacccggcctgacaagactgaggggccactggtaattagtgaggacctgaat +gggttgactttcctccgccgaacaatcacccgcgatccagcgggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaaggggacccaaccatgaagaccccagtgagactatgataccacacgca +cagagacctgtgcagctcatggcactgctaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtacgctggtggagttgaagtccaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacatat +aatagtagatgttagaactcttgaaccaattatgatcccattacctgatgttaggaacacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgttttcactgtttcttgcagggttttgactagacctactcctgattttgagttcacttactt +agtgccaccctctgttgaatctaagactaagcccttttccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccggtccccattgattcgcttttcaccgcccagaacaatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgacggtgagctacaaggcacaacccagttgctcccatctggcatctgtgcgtt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgata------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacgtatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttgggatggcaagccaaa---gaaatgtgggt----- +------------aacgatgcgcccggctcaacc--------agg-----------gctcatgaggcggtgat +ttcaacctacagccccagatttgttcccaaattaggctctgtcaattttaaa------------agtaatga +caatgattt---ccaatt---gcagccaacaa---------------------------gattcacaccag- +--------tgggcatca---atgatgatggcg---------accacccgttcagacaatgggaactgccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattactcttcagatcttccgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctaccaggaatcagcaccttctca +gtcagacgtggccctgatcaggtacgtcaaccccgacacgggtcgcacactgtttgaggcaaaattgcacag +atctggctatatcactgtggctcactctggagactatcctctcgttgttccggctaatggatactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcgggtgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcaacatgataaagagatgctccaa +gcgcaggtaaatgcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggggccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcgatattgggctcccaattccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatgcccagcccgagt---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagtccag--------------------------- +------------------------------atctctaggttcttcttcttcttctagt------------ag +t--gttta-----------tagta------------tg-------tctacccaatcaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcttctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcgaaa---------------------------------------caggacagcagagtgggtgaaccaaca +gag---aagtctcagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccttcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgagggg-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP805363.1/1-7451 |Norovirus GII isolate 446223 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------gacgcttccgtcgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggtctaaacagccg-cccccgggagaaacaaaacaa +acacaaag---------------accaccaaggccaccgacaccggaattggtg-------aagaagatacc +ccc-----------------------------acccccccccaatgg------tgaggatgaaccaaagata +gcgtataagg----------tggg---agaaggtgtgtctgggctgcccgacttgacaaccgtggcacaacc +tgacgcacagaacacagcctacagtgtccccccacttagccagagagaggccggcgaagctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actgggagtgcacaagccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtttacactcccc---aatatttgatagctccagagacccttaagaatttaaatggagaggcttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggttttagacctcaacgactcctggct +tag---cagaagaatgatccaaagaacaactggattcttcagaccgtatcaggactggaacagaaaaccctt +gccaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +taggcccatcaaagacgtcattggaaagctcaaaccactgaacattatgaacatactggcaacttgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgagctcttt---ggggtgttctggacgccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacactcagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgagttagccatggtgagggccattgaggatgcagt +tctggatttggaggcaatagaaaacaaccacatgaccactctccttaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaaggaaactgtcatccaaatcggcgtcacctgacatcgt +gggcacagtaaacgcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagaggcctgttgttgtaatgatatcaggtaggccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagcgggtggttctgtgggatgactatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataattataacaaccaacctcgcaaacccagcaccactggattatgt +caactttgaggcttg-ttctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagatcagacttctcacacattaaacttc +agctggcaccacagggaggctttgataagaatggcaacaccccacatggcaaaggtgtggttaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccatgagagaatggatgaatttgagctccaaggct +ctgatttaccaaccttcaatttcgaccgtaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaagcagg +ctataaagaacatcaccatcaagaagtgccagatagtgtacaatggatgcacctacaccgtggaatctgatg +ggaggaacaaggttgtggttgaaaaggttcaaaatgcaacagtccaaaccaacaatgaacttacaggagcac +tccaccacctgagatctgcaaggataaggtattatgttaaatgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcaccacacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgatga--------gcctgaagacaaagaggggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaagacattaaagcagaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggaggagaggaatggcaaatactcaattgaagaatacctccaggacagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccggcccaccaggaagcaacggagagaggaaagagccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaagccaaaaggaaaactttgggctgatgacaacagaagtgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggtacaggatggg +gattctgggtctccc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggctttt +ggagttcccattaaccaaattcaaattcacaaatctggagagttttgccgcttgcggtttccaaaaccaatc +aggccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggaactgatgcctctcgcagttagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcaaatgggcatgcttctcactggctcaaacgctaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggcgaagccaccctcgaaggaggtgac +aacaagggcacctattgtggggcccccatcttgggacctggcaacgcaccaaaattaagcacaaaaacaaaa +ttctggagatcttccaacgcgccgcttcctccaggtacctatgaaccagcataccttggtggaaaagacccg +cgtgtgaagggaggcccatctctacaacaggttatgagagaccaacttaaaccttttacagagccaagaggg +aagccaccaaaaccaagtgtcctagaatcagcaaagaagaccatcattaatgttctggagcaaaccattgac +ccccctgaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aaccttatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggctctgacctatctaccatgattcgatgc +gccagggcatttggtggcctcatggatgagctcaaagcaaattgtatcacactccctgtcagagttggtatg +aacatgaatgaagatggtcccataatatttgagaagcactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagtt-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaattgttatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtaacaggactaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaaattgactgcaaaactc +aaagaatatggtcttaaacccacccggcctgacaagactgaggggccactggtaattagtgaggacctgaat +gggttgactttcctccgccgaacaatcacccgcgatccagcgggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaaggggacccaaccatgaagaccccagtgagactatgataccacacgca +cagagacctgtgcagctcatggcactgctaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtacgctggtggagttgaagtccaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacatat +aatagtagatgttagaactcttgaaccaattatgatcccattacctgatgttaggaacacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgttttcactgtttcttgcagggttttgactagacctactcctgattttgagttcacttactt +agtgccaccctctgttgaatctaagactaagcccttttccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccggtccccattgattcgcttttcaccgcccagaacaatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgacggtgagctacaaggcacaacccagttgctcccatctggcatctgtgcgtt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgata------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacgtatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttgggatggcaagccaaa---gaaatgtgggt----- +------------aacgatgcgcccggctcaacc--------agg-----------gctcatgaggcggtgat +ttcaacctacagccccagatttgttcccaaattaggctctgtcaattttaaa------------agtaatga +caatgattt---ccaatt---gcagccaacaa---------------------------gattcacaccag- +--------tgggcatca---atgatgatggcg---------accacccgttcagacaatgggaactgccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattactcttcagatcttccgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctaccaggaatcagcaccttctca +gtcagacgtggccctgatcaggtacgtcaaccccgacacgggtcgcacactgtttgaggcaaaattgcacag +atctggctatatcactgtggctcactctggagactatcctctcgttgttccggctaatggatactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcgggtgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcaacatgataaagagatgctccaa +gcgcaggtaaatgcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggggccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcgatattgggctcccaattccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatgcccagcccgagt---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagtccag--------------------------- +------------------------------atctctaggttcttcttcttcttctagt------------ag +t--gttta-----------tagta------------tg-------tctacccaatcaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcttctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcgaaa---------------------------------------caggacagcagagtgggtgaaccaaca +gag---aagtctcagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccttcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgagggg-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP805364.1/1-7451 |Norovirus GII isolate 446225 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------gacgcttccgtcgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggtctaaacagccg-cccccgggagaaacaaaacaa +acacaaag---------------accaccaaggccaccgacaccggaattggtg-------aagaagatacc +ccc-----------------------------acccccccccaatgg------tgaggatgaaccaaagata +gcgtataagg----------tggg---agaaggtgtgtctgggctgcccgacttgacaaccgtggcacaacc +tgacgcacagaacacagcctacagtgtccccccacttagccagagagaggccggcgaagctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actgggagtgcacaagccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtttacactcccc---aatatttgatagctccagagacccttaagaatttaaatggagaggcttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggttttagacctcaacgactcctggct +tag---cagaagaatgatccaaagaacaactggattcttcagaccgtatcaggactggaacagaaaaccctt +gccaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +taggcccatcaaagacgtcattggaaagctcaaaccactgaacattatgaacatactggcaacttgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgagctcttt---ggggtgttctggacgccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacactcagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgagttagccatggtgagggccattgaggatgcagt +tctggatttggaggcaatagaaaacaaccacatgaccactctccttaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaaggaaactgtcatccaaatcggcgtcacctgacatcgt +gggcacagtaaacgcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagaggcctgttgttgtaatgatatcaggtaggccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagcgggtggttctgtgggatgactatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataattataacaaccaacctcgcaaacccagcaccactggattatgt +caactttgaggcttg-ttctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagatcagacttctcacacattaaacttc +agctggcaccacagggaggctttgataagaatggcaacaccccacatggcaaaggtgtggttaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccatgagagaatggatgaatttgagctccaaggct +ctgatttaccaaccttcaatttcgaccgtaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaagcagg +ctataaagaacatcaccatcaagaagtgccagatagtgtacaatggatgcacctacaccgtggaatctgatg +ggaggaacaaggttgtggttgaaaaggttcaaaatgcaacagtccaaaccaacaatgaacttacaggagcac +tccaccacctgagatctgcaaggataaggtattatgttaaatgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcaccacacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgatga--------gcctgaagacaaagaggggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaagacattaaagcagaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggaggagaggaatggcaaatactcaattgaagaatacctccaggacagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccggcccaccaggaagcaacggagagaggaaagagccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaagccaaaaggaaaactttgggctgatgacaacagaagtgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggtacaggatggg +gattctgggtctccc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggctttt +ggagttcccattaaccaaattcaaattcacaaatctggagagttttgccgcttgcggtttccaaaaccaatc +aggccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggaactgatgcctctcgcagttagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcaaatgggcatgcttctcactggctcaaacgctaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggcgaagccaccctcgaaggaggtgac +aacaagggcacctattgtggggcccccatcttgggacctggcaacgcaccaaaattaagcacaaaaacaaaa +ttctggagatcttccaacgcgccgcttcctccaggtacctatgaaccagcataccttggtggaaaagacccg +cgtgtgaagggaggcccatctctacaacaggttatgagagaccaacttaaaccttttacagagccaagaggg +aagccaccaaaaccaagtgtcctagaatcagcaaagaagaccatcattaatgttctggagcaaaccattgac +ccccctgaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aaccttatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggctctgacctatctaccatgattcgatgc +gccagggcatttggtggcctcatggatgagctcaaagcaaattgtatcacactccctgtcagagttggtatg +aacatgaatgaagatggtcccataatatttgagaagcactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagtt-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaattgttatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtaacaggactaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaaattgactgcaaaactc +aaagaatatggtcttaaacccacccggcctgacaagactgaggggccactggtaattagtgaggacctgaat +gggttgactttcctccgccgaacaatcacccgcgatccagcgggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaaggggacccaaccatgaagaccccagtgagactatgataccacacgca +cagagacctgtgcagctcatggcactgctaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtacgctggtggagttgaagtccaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacatat +aatagtagatgttagaactcttgaaccaattatgatcccattacctgatgttaggaacacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgttttcactgtttcttgcagggttttgactagacctactcctgattttgagttcacttactt +agtgccaccctctgttgaatctaagactaagcccttttccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccggtccccattgattcgcttttcaccgcccagaacaatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgacggtgagctacaaggcacaacccagttgctcccatctggcatctgtgcgtt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgata------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacgtatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttgggatggcaagccaaa---gaaatgtgggt----- +------------aacgatgcgcccggctcaacc--------agg-----------gctcatgaggcggtgat +ttcaacctacagccccagatttgttcccaaattaggctctgtcaattttaaa------------agtaatga +caatgattt---ccaatt---gcagccaacaa---------------------------gattcacaccag- +--------tgggcatca---atgatgatggcg---------accacccgttcagacaatgggaactgccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattactcttcagatcttccgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctaccaggaatcagcaccttctca +gtcagacgtggccctgatcaggtacgtcaaccccgacacgggtcgcacactgtttgaggcaaaattgcacag +atctggctatatcactgtggctcactctggagactatcctctcgttgttccggctaatggatactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcgggtgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcaacatgataaagagatgctccaa +gcgcaggtaaatgcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggggccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcgatattgggctcccaattccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatgcccagcccgagt---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagtccag--------------------------- +------------------------------atctctaggttcttcttcttcttctagt------------ag +t--gttta-----------tagta------------tg-------tctacccaatcaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcttctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcgaaa---------------------------------------caggacagcagagtgggtgaaccaaca +gag---aagtctcagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccttcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgagggg-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451906.1/1-6861 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ1007 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------tggggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaacgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------cttta- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451907.1/1-6886 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ1016 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacagggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagtcggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgtaaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccggaggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagatagtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtatgggctaaaaccaacccgccccgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtctgacattcctccgaagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaataccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggccaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtacagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcttaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tttgc- +-------a-------gc---aat------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451908.1/1-6863 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ7033 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaagttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggagaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaggggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggctcctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgggtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctgggttggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaaaccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagccaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------c-t-----t--------tctta- +-------a-------ga---tg-------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451909.1/1-6823 |Norovirus GII isolate Hu/CHN/2022/GII.P31-GII.4/SJZ7309 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggaaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gctcgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacatg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaaa------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451910.1/1-6859 |Norovirus GII isolate Hu/CHN/2022/GII.P31-GII.4/SJZ7311 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------gggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaacgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------cttta- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451911.1/1-6879 |Norovirus GII isolate Hu/CHN/2022/GII.P31-GII.4/SJZ7405 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacaggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgtaaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +aaaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtatgggctaaaaccaacccgccccgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaataccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtacagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacagagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagctccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tttt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451912.1/1-6859 |Norovirus GII isolate Hu/CHN/2022/GII.P31-GII.4/SJZ7488 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagatacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgtaaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtatgggctaaaaccaacccgccccgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaataccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtacagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacagagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagctccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------cttta- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451913.1/1-6886 |Norovirus GII isolate Hu/CHN/2022/GII.P31-GII.4/SJZ7620 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacagggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagtcggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgtaaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccggaggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagatagtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtatgggctaaaaccaacccgccccgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtctgacattcctccgaagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaataccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggccaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtacagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcttaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tttgc- +-------a-------gc---aat------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451914.1/1-6844 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ7933 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------aagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggaaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gctcgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacatg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451915.1/1-6857 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8021 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgcgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaagggcccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggagatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaaacggtacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggcgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagctttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaacctcaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggctcccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcaacccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------aa +aaagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcccctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------tctt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451916.1/1-6881 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8032 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacaggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgcgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaagggcccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggagatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgaggcctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattattactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatcggtacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggcgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccacgggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +atatggatgagattctcagatctgaccacgtgggagggcgatcgcaatcttgctgccagctttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaacctcaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggctcccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttccccatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagataagcaggcaatgctcctagagggt +gggttctctgagacagatgcaacccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggc +acaaggtactgggctcctgatgctacgactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------aa +aaagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcccctttcatta---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------ctttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451917.1/1-6881 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8123 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacaggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgcgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaagggcccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggagatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgaggcctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattattactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatcggtacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggcgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccacgggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +atatggatgagattctcagatctgaccacgtgggagggcgatcgcaatcttgctgccagctttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaacctcaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggctcccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttccccatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagataagcaggcaatgctcctagagggt +gggttctctgagacagatgcaacccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggc +acaaggtactgggctcctgatgctacgactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------aa +aaagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcccctttcatta---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------ctttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451918.1/1-6879 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8237 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacaggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgcgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaagggcccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggagatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgaggcctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattattactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacgggtacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccggcggcagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggcgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacgggaaaattggccgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgcgtcacactccctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagtgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagctttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaacctcaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggctcccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtccccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------ctta-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451919.1/1-6881 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8380 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacaggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgcgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaagggcccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggagatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgaggcctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattattactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatcggtacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggcgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccacgggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +atatggatgagattctcagatctgaccacgtgggagggcgatcgcaatcttgctgccagctttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaacctcaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggctcccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttccccatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagataagcaggcaatgctcctagagggt +gggttctctgagacagatgcaacccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggc +acaaggtactgggctcctgatgctacgactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------aa +aaagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcccctttcatta---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------ctttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451920.1/1-6844 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8458 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------aagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggaaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gctcgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacatg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451921.1/1-6863 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8534 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggcttcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaagttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggagaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaggggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggctcctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgggtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctgggttggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaaaccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagccaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------c-t-----t--------tctta- +-------a-------ga---tg-------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451922.1/1-6844 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8608 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------aagaatgattcatagaacaacaggcttctttgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaaaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggaaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtcgtcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactccccactgag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gctcgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggaccagggagcgctccgaagctcagcactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctccgagtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgttcgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaacgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OQ451923.1/1-6859 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8700 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------gggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtgggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtata +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ccgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacgggaaacgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgtt---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------cttta- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OQ451924.1/1-6886 |Norovirus GII isolate Hu/CHN/2021/GII.P31-GII.4/SJZ8784 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------gagaatgattcagagaacaacagggctcttcgggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagagacggcacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagtcggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgtaaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccggaggcagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgtgctctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagatagtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtatgggctaaaaccaacccgccccgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtctgacattcctccgaagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaataccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggccaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtacagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcttaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tttgc- +-------a-------gc---aat------------------------------------------------- +------------------------------------------------------------------------ +- +>OP901692.1/1-7587 |Norovirus GII isolate GII/Hu/RU/2022/GII.6[P7]/Nizhny_Novgorod496, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtaacaacaccgccccttctagtaaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcagtga----------------tcagcactgcccctcagtcaagatcggggccaagacattaacagttcc +ccc-----------------------------tgaacccccaaacgg------tgaagac------accgtg +cagtttgatg----------cgaagtcagaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacatgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactcgagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +cctaggggtccacaagccccctgcagcgataagcctcgcgacaatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctatacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctctaggaccaccggtttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcgcttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaacttgctacacttgctcgcatcatgtgactg +gacgtttgcaggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttctggacaccgcc +agatgtttccagcttcatagcctctctgataggtgattttgaactgcaaggacctgaggaccttgctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaggctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaagaagaaat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggtattggcaagacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagggtgggacttgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttctgtgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactgcaagagttggccgacacctgcccagtgactctaaactgtgataggattgagaacaa +agggaagatgtttgacagtgatgtcatcataattacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagaatcaccagaaatcgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagcaagacttttcccacataaagctga +ctctagccccacagggtggatttgacaagaacggcaacactccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggccttgttcatgagaggagagacgagttccagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcgtttaggaagctggccgcagacaacaagt +acgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttagaagacctgaaagttg +cactgagggatgtgaagttcaatgaatgtgagataatttacagaagctccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagttgaggaccaaacatcccaaactgcaaacgaagtgggcgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aggtggcccaaggca---gatgggagattgagccaaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacatacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagagaaggccagacgattttcaaccgaggggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgattttgaggctcccccaagtgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-caaaccttctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcaaattcacaagtccggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacggggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaagatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcaaagaacatggaccttggcactggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatctgtgccactcaagggatagatggggaagcagtccttgagggaaatgaa +agccatggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagtacgaagaccaag +ttctggcgctcatcaccagatgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacccagacctgcagtcttggaagaagctaaaaagacagtaatgaatgttttagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacctccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgagctagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagcccttccatgcagggtaggaatg +aacatgaatgaggatggacccatcatatttgacaaacattctaagtataggtatcactatgatgctgactac +t-ccaggtgggactcaacccaacaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcgcaagtggttgcagaggacctcctggcacccagccaattagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtatcgggtctttcaccagatgttgttcaagcccactcctgtttt +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtccccttgtaataactgaagacctcacc +ggcctaacgttcctgcgcaggtcgattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcaggcagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacaactcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggaaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagttctactgcccctccctgacataaggaatagattcttccacta +caatcaggaaaatacc---ccccggatgagacttgtagctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtattcacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgtttct +ggtgccaccaactgtggagtcaaagactaagccctttacacttcccattctgactcttggggagctgtccaa +ctccaga---ttccccgctccgatagacatgctgtatactgaccctaatgaggcaattgtggtgcaaccaca +aaatggtaggtgcactctagatggaacacttcagggcaccacccaactggtacccacccaaattagctcctt +caggg-----------------------------------------gcacgctgattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgatccaacagatgaggtgccggc +agttttgggtgccatagatttcaagggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccccagatacaccccaaagctaggctctgtgttgat---gt---------attctgaatc +tgctgattt---cgatgatggacaacctaccc---------------------------gcttcaccccca- +--------ttggaatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttact------cttaacatgaacttggctcccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtaccat------ccgctggtggcta------tggat--------- +--caggtcacatagattgcctcattccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttattaggtatgtcaaccctgacactggaagaaacatttttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgccccctaatggttacttcaggtt +cgaggcctgggttaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agtcc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataagcag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtgttggccaccaaacagctccagcaagagatggtgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcaagaggtgctgtaaatgcaccgatgacaaaaattttggattggaatggg +actaggtactttgctccaaacagtatgaagacaaccagttactcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactctaacc---cgttctgaatc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcaactactattccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggaccagcgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccatagacagcctctcttcgctc +atattcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---c---tccttt +t------------cttt-----cttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaa---------------------------------------------------------- +- +>OP901693.1/1-7586 |Norovirus GII isolate GII/Hu/RU/2022/GII.3[P12]/Nizhny_Novgorod589, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttataacg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggatgccaaggagccgct +gaccggaacaattctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattggcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagatataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgctcttctggcgagaatcgccgctgcacgttcactggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccaacgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagtgcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatctcaggtgcgccagaatcaggtattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaagtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagattcgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactgggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactatcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agtaaggggacctactgcggcgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtaggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtactggactagaggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcagcctcccgatgcctgacgttcgcaataacttctttcacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttactctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagcttttacccagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcgttagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggcg +agcagctcctcttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctagtgctatcaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctattaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaggtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------taaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcgttac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccgcacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attgaatttga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>OP901694.1/1-7599 |Norovirus GII isolate GII/Hu/RU/2022/GII.4_Sydney[P16]/Nizhny_Novgorod789, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaattaacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaggagtggaatagaaaaccctt +gcctaccatggacgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtaagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaatacctctatacaaaccaacaacgagttggtcggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttaagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaaccgtgctcatcaaa +cgccccaccggagagctcatgccacttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgcggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacctctcagtggaactccatcacacactgg +ctgctaaccctctgtgccttatctgaagtcaccaaactgtcccctgacattatacaagcaaactctatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggcgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagagggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcaccagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaagtcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccagcagtgggtactcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccaccccc--------- +ca---------------------accgtcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaat------------tcttctgctgccacctcta----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----tttt--ctttttc-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>OP037976.1/1-7560 |Norovirus GII isolate SH21-429, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037977.1/1-7560 |Norovirus GII isolate SH21-484, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacaggggagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagagtc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgt---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037978.1/1-7560 |Norovirus GII isolate SH21-529, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaaaaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tccttcacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +acctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtactcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagtaccacccatctaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataatagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggagcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037979.1/1-7560 |Norovirus GII isolate SH21-574, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctagacccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaggacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctctttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgttaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaactttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacacagggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagtaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggacccttc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037980.1/1-7560 |Norovirus GII isolate SH21-599, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggagaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatagtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagccattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggagtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgagcaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgactgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctagggactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctccagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgccaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037981.1/1-7560 |Norovirus GII isolate SH21-632, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggctaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatggaaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcgtac +aaatcgccggtgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagcctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aagctggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatcccttcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagctaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----acttaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037982.1/1-7560 |Norovirus GII isolate SH21-698, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaagcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatggaaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aagctggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggtcgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaggggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacagcagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccactgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcgggacaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP037983.1/1-7560 |Norovirus GII isolate SH21-720, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaagatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgagccacaa +aag---------------------cccccaaaaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tccttcacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +acctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgtttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atgggctggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctatacaaaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaggagagggccacattagggctggtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtactcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtctaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaggttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggtcccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagtaccacccatctaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggagcaattaacgcccccatgacaaaggttttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP727605.1/1-7514 |Norovirus GII isolate OBS1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactgatt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtg +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagactcacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgttggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccaccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaagacccaag-- +-gat----gatgagg---agtttgtcatttcgtccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggtatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagttaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatccgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcccctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727606.1/1-7543 |Norovirus GII isolate OBS2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactgatt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtg +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagactcacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgttggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccaccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaagacccaag-- +-gat----gatgagg---agtttgtcatttcgtccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggtatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagttaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatccgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcccctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----c--------tc---- +--------tt---tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>OP727607.1/1-7519 |Norovirus GII isolate OBS3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactgatt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtg +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagactcacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgttggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccaccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaagacccaag-- +-gat----gatgagg---agtttgtcatttcgtccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggtatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagttaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatccgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcccctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727609.1/1-7498 |Norovirus GII isolate OCS2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagagaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttttg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtatgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaacggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaagggccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggatcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcaccaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727610.1/1-7529 |Norovirus GII isolate OCS4 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagagaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttttg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtatgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaacggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaagggccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggatcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcaccaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>OP727611.1/1-7507 |Norovirus GII isolate ODS3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtctccggactgcctgagctcaccactgtcagacaacc +ggaagaaacaaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtctcat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttagaagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaaaaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgactatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaataaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggaaaaagccagaaaactctcaaccaaatctgcctcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcacctcgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgtaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcggaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaatgcttttagtcctgacttctcacacataaaactgt +cattggccccacagggtggttttgacaagaacggcaacactccgcatggaaaaggggtcatgaagaccctca +ccaccggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgagctgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaataccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaattcggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgtcgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctataagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtcattcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccagatagttgcagaagatctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccatctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgactcgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggaccggcattctatagcaagatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttattggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctaggaacgctccagg +tgaaatactatggagcgcgcccttgggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgagggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttgcccgatgtcaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtacttttgttgtccaaccaca +aaacggtaggtgcacaactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacacc------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tatccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggctc--------tacagctggctctggtaccagtgtctctagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaagatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcttct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727612.1/1-7514 |Norovirus GII isolate OES1 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +-tctgtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccattagccttgctagggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgccttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaaggtacttgcttttagacaacttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcgggctggg +gcttctgggtctccc-ccaatctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgactggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagagcccagaggc +aaaccaccaagaccaagtgtgctggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattac +t-cccggtgggactcaacacagcaaagggatgtgctagcaacagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaaatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctatcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccctgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcttgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattagaacaaagttca +attctcaggcaaatgtactggaccaggggtcctaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggagggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgagccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagctcgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaagaa----------------gagctaatctcagggatac------------------------------ +------------------------------tgtccctactcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727613.1/1-7513 |Norovirus GII isolate OES3 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--ttgtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccattagccttgctagggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgccttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaaggtacttgcttttagacaacttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcgggctggg +gcttctgggtctccc-ccaatctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgactggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagagcccagaggc +aaaccaccaagaccaagtgtgctggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattac +t-cccggtgggactcaacacagcaaagggatgtgctagcaacagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaaatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctatcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccctgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcttgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattagaacaaagttca +attctcaggcaaatgtactggaccaggggtcctaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggagggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgagccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagctcgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaagaa----------------gagctaatctcagggatac------------------------------ +------------------------------tgtccctactcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP727614.1/1-7512 |Norovirus GII isolate OES4 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +---cgtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccattagccttgctagggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgccttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaaggtacttgcttttagacaacttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcgggctggg +gcttctgggtctccc-ccaatctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgactggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagagcccagaggc +aaaccaccaagaccaagtgtgctggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattac +t-cccggtgggactcaacacagcaaagggatgtgctagcaacagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaaatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctatcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccctgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcttgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattagaacaaagttca +attctcaggcaaatgtactggaccaggggtcctaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggagggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgagccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagctcgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaagaa----------------gagctaatctcagggatac------------------------------ +------------------------------tgtccctactcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP729310.1/1-7245 |Norovirus GII isolate OAS1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------cccccccccaaatgg------tgaggac------gtggtt +tattacaaca----------gtaaaaatgacaccgttgatggcttgcctgacctgaccacagt---ccagga +tgagcatgaacattctccttacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattactccatatatgtcagcaacggcaaggc +gcttggcgtgcataaaccacccgctgctataagcgtcgccaccattgatttgactcccatatcattatactg +gaggccagtgtacactccac---catacctagtgcaccctgacactctcaagggccttgctggagagaaatt +tccatacacggcatttagcaacaattgttacaatttctgttgctgggttctggacttgaatgactcgtggct +gag---taggaaatccatatccagaacaactggtttctataaaccataccaatcatggaacaggaaacccct +ccccacagttgatgatgggaagatcaagaaggtggccaacgcagtgttgtgtgccctaggatcactgttctc +aaaacctatcaaagacttgcttggaaagttgaaacccctgaacttgcttaacctattggcatcatgtgattg +gacattcgccgggatagtggaaacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaattttatagcctctctgattggggactttgaaatgcaagggccggaagatctcgccgtgga +gcttgtgcccgtagtgatgggggggattggaatggttctgggcttcaccgcagaaaagatagggcgcatgct +ttcttcggccgcctccactttaagggcttgtaaagacctgggaaactacgccctggacatactcaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagccatagaagatgcggt +tcttgatatggaggcaataggcaataaccacctgactacactgctcaaagacaaagacagtctaaccgccta +catgaaaaccctggatttggaagaagaaaaggcacgaaagctttcaacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcacttctccacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctcaggaagacccggtatagggaaaacccatatggcgag +gcaattggccaaaacaatcgccggcacgatgactggagaccagagagtcggacttgttcctcgcaatggggt +tgatcattgggatgcctacaggggggagagagtggttctttgggacgattacggtatggggaatacaatcaa +ggatgccctcaccctgcaagaactggcggatacatgccccgtcacccttaactgtgacaggattgagaacaa +agggaaaatgtttgacagcgatgtcatcataataaccaccaatctagtcaacccagcacccctcgactacgt +caacttcgaggcctg-ctgcagaagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggatatgtggcgcgaccacttcaaaccagattcatcccatatcagactgt +ccctggcccctcaaggtgggtttgacaagaatggaaacaccccacatggaaaaggaacgatgaagaccctca +cccagggctccctcactgctcgagtagccggcttggtgcatgagaggagggacgagtttcagttccaagggg +atgaggtgcatctttacaactttgatgccaacagagtgtctgcatttaggaagttagcagctgacaataagt +acagcctcatggaaactatgaaggttggttccgccctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggactgtaaaattcaaagagtgcgaaatattatacagagggtcaaagtaccgtgtctcatccgatg +gctgtgggaatgtctcagttactaaagtaaaagacatgatgtcacagaccaccaatgaggttcactcagcct +tgatcagattgagacaagcccgggctaggtactacattagttgcttccaagacctaatttacaccctcatcc +aggttgccggcgcttccttcgttgtgc---------------acagaa------tatcaaggaggttctcat +gggagcggtggatcaaaccctctgaggcc---------cttcccgaggatggccaagtcggc-----ctaac +ggataacactgag-a---ggtgggaggttgagccgaaagatgccgatccagagggcaagaaaggtaaaaaca +agaaaggcagaggcagaaaacacacagccttctctagcaagggcctcagtgatgaagagtatgatgaattca +agagagtgagggaagaaaggggtggaaagtacaccatcgaggaatacctccaagacagagaccgcttt---t +atgaagaggtagcggtagctcgtgccactgaagaggacttctgtgaggaagaaattgctaagatcagacagc +gggtctttaggcctaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcagaaaaaggaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaaggagtgtagact +acaatgagagattagactttgaggccccacctagcgtttggtcacgtatagtccccctgggtactggctggg +gattctgggtttcat-caaatctgctcataactaccactcatgtgctaccaaaaggtgttagggaactattt +ggtgttgacataaaacaagttcaaatacataaatcaggtgaattttgcagattcagatttccccgaccaatt +aggccagatgtgaccgggttaatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtgagg +agacccacaggggaaatgatccctcttgctgttaggatggggacacatgcctccatgaagatacaaggtaga +acagttggtgggcagatgggcatgcttctgaccggagcgaatgccaagaacatggacttgggcaccatacca +ggagactgtggctgtccatacatttacaagaggggtaatgacattgtagtagccggagttcacactgctgct +gcaagaggaggaaacactgtcatctgtgccacacaagggcctgacggagaggccgttttggaaggaggggac +gacaagggaacgtactgtggcgcgccgatacttagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaagcattgccaccaggaacgtacgaacctgcctacctgggtggcaaagacccc +agggttgaaaaaggaccttcgctccatcaggtcatgagagatcaattgaaacctttcaccgcgcccagggga +aaaccgccgaatcccactgtccttgaagaagccaagaagaccgttatgaatgtcctcgagcaaaccatagac +cctgcaaaaccttggacctatgctcaagcctgcgcttctcttgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaacggagaatctttcacgggacccttagctgaccaagcctctaaagcc +aacctaatgtatgaacaggcgaaacacgtcagtcctgtttatacagcagccctcaaggatgagttagtcaaa +actgacaagatctacaaaaagattaagaagaggttgttgtgggggtctgatctgggcactatgatcaggtgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggccttaccttgtagagtaggtatg +aacatgaatgaagatggccccatcatatttgacaagcactcaaaatacagattccattatgatgcagattac +t-ctaggtgggactcaacacagcaaaggtgcatcttggccgcagcaatggaggtcatgg-tgaagttctcag +ctgaacccgagct-ggcccaaatagttgcagaagacctgctagcccctagccaacttgatgttggggacttt +gtgatctccgtgcaggagggtcttccttctggtgtcccttgcacttcacaatggaactcaatagcacattgg +atcatcaccctaagtgctatggcagaagtgtctggtctctccccagaagttatacaggccaactcatgcttc +tctttttacggggatgatgagatagtgagcactgatattaacttggacccagccaaattgactcagaaattg +agggaatatggattagtgcccaccagaccagataagacagaaggccccttagttatcactgaaaacttgcat +ggactgacatttctgcgaagaactgtcactcgtgacccagcaggttggtttggaaaactggatcaagactca +attctaagacagctttactggacaagaggcccaaatcatgagaacccctacgaaagcatggtcccccactca +caacgtgccactcaactcatggcccttttgggggaagcctctctccatggaccccaattctacaagaaagtc +agcaagatggtcattaatgagataaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttt +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatcttgctcccgatggtgtgaatgaa +gatggcgtcgaatgacgcgagtccgtctag---tgacgggtcagccaacctcgtcccagagatcaacaatga +ggtgatggctcttgaaccagtagcaggtgctgctattgccgcaccagttgctggacaacaaaatataataga +tccctggattagaaataattttgtgcaggcccctggtggtgaatttacagtttccccaagaaatgcaccagg +ggaagtgctcctaaatttgcctttaagccctgatatcaacccatatttggcccatttgtcccgaatgtacaa +tggctatgcaggaggcgtggaggtagaggtggtcctcgctgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaatttccctcctgaaaaccttagcccaagccaaataactatgctcccccatat +tatagttgatgttaggcaattggaaccagtgcgcatacccttgccggatgtgcgcaacaatttctaccatta +ttcaagagaaaatgat---tccacattgaggttgattgcaatgctgtatactccccttagagctaataatgc +tggtgatgatgtcttcactgtctcctgcagggtgttaacaagaccctctcccgacttcgatttcatatttct +ggtgcctcctactgttgaatctaagtctaagccctttactatcccaatcttgactattgaggagatgactaa +ctccaga---tttcccgccccattggaaatgatgactactggcccgagccacgagattgtggtgcaaccgca +gaatgggcgctgcactatcgatggagtgctgctcggcaccacacaattgtctcctgttaacatctgctctat +gaggg-----------------------------------------gtgtcccgacaaagaggg-------- +----------ataatggaaaca------acaac--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcatcttgagaacatcaatggaaccccctatgatcctactgaagacatccctgc +cgtgctgggagcgcctgattttgtgggagtgttgtatgggacaatcagccaaa---ggagccccga------ +-----------------------caactcaacc--------agg-----------gcccaccccttcaccct +caacactggagatgacaggtacacccctaagttaggttccatagacatacaca---------ttgatgatgt +cgatgacat---gcaaaacaaccaaactgtga---------------------------aaatgaccccag- +--------tgggtttagctggattggaaagag---------gatcaaccacccaccagtggcaactaccaag +gtactccggggtg-gccacc------cacaacatgcacttggccccatctgtctcccctcttttccctggag +agcaaattcttttcttccggtcgacagtccccg------gctgtgggggtta------cccgg--------- +--acacaaaaattgactgcttaatcccccaggaatgggtccagcatttctaccaagagagcgccccagcgcg +cactgatgtggccctgctgagattcatcaacccggatactggcagggttctatttgagtgcaaattacataa +acaagggtacatcactgtggcctattcaggagttcatgatttggttatgccccctaatggatacttcagatt +tgagtcttgggtgaatcagtttcacactcttgcccccatgggaacaggttcgggcagaagg---------cg +catcc---------aataatggcaggagcattcttggcaaatttagctggtggtgtggcgtcaaacggaatc +gggtcattgatcaatgcagg---cgcgaacgccataaatcagagggtggaatatgatttcaacagacag--- +------------------------------ttacaaaatgcatcatttgcccatgacaaggacatgctccaa +gcacagattcaggcaacaaaacagcttcaacgcgacatgatggccatcaagcaggaggtcttgaccgcgggc +ggcttttcccctgctgatgccgcaagaggggcggttggggcaccaatgacaaaactagttgactggagtggt +acaaggtactgggcaccaaattctatgaagaccacaggctattccggaacttttagcagccaaccaatctca +ca-----------actcgcaactcaaccaa------------------------------------------ +-----------------------aagttgtg---aaacaacca----------------------------- +-----------------------------------gctccagggaaaaaccccccc--------------tc +agtcccct-----------caagtgg------------ttcttctgtgagttctc----------------- +---------------------ttgtgacaca---atcaacttccctacaga--------------------- +---gttc----c---cctagt-------------agatcagcatctagccaat---------caacgagcct +caccat-------------------tccc--------tctcattcaagaacatcagactgggtccgcagtca +gaatgacaggctgagccctttcatgg---gtggagcacttcaaacagcctttgtgactcccccatcaagtag +ggcttct---agtg------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcccatgt------------ttaacacacataggcagccactcttcgccc +atcttcgtaggcgaggggagtcacg--------agtctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP729311.1/1-7245 |Norovirus GII isolate OAS3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------cccccccccaaatgg------tgaggac------gtggtt +tattacaaca----------gtaaaaatgacaccgttgatggcttgcctgacctgaccacagt---ccagga +tgagcatgaacattctccttacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattactccatatatgtcagcaacggcaaggc +gcttggcgtgcataaaccacccgctgctataagcgtcgccaccattgatttgactcccatatcattatactg +gaggccagtgtacactccac---catacctagtgcaccctgacactctcaagggccttgctggagagaaatt +tccatacacggcatttagcaacaattgttacaatttctgttgctgggttctggacttgaatgactcgtggct +gag---taggaaatccatatccagaacaactggtttctataaaccataccaatcatggaacaggaaacccct +ccccacagttgatgatgggaagatcaagaaggtggccaacgcagtgttgtgtgccctaggatcactgttctc +aaaacctatcaaagacttgcttggaaagttgaaacccctgaacttgcttaacctattggcatcatgtgattg +gacattcgccgggatagtggaaacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaattttatagcctctctgattggggactttgaaatgcaagggccggaagatctcgccgtgga +gcttgtgcccgtagtgatgggggggattggaatggttctgggcttcaccgcagaaaagatagggcgcatgct +ttcttcggccgcctccactttaagggcttgtaaagacctgggaaactacgccctggacatactcaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagccatagaagatgcggt +tcttgatatggaggcaataggcaataaccacctgactacactgctcaaagacaaagacagtctaaccgccta +catgaaaaccctggatttggaagaagaaaaggcacgaaagctttcaacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcacttctccacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctcaggaagacccggtatagggaaaacccatatggcgag +gcaattggccaaaacaatcgccggcacgatgactggagaccagagagtcggacttgttcctcgcaatggggt +tgatcattgggatgcctacaggggggagagagtggttctttgggacgattacggtatggggaatacaatcaa +ggatgccctcaccctgcaagaactggcggatacatgccccgtcacccttaactgtgacaggattgagaacaa +agggaaaatgtttgacagcgatgtcatcataataaccaccaatctagtcaacccagcacccctcgactacgt +caacttcgaggcctg-ctgcagaagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggatatgtggcgcgaccacttcaaaccagattcatcccatatcagactgt +ccctggcccctcaaggtgggtttgacaagaatggaaacaccccacatggaaaaggaacgatgaagaccctca +cccagggctccctcactgctcgagtagccggcttggtgcatgagaggagggacgagtttcagttccaagggg +atgaggtgcatctttacaactttgatgccaacagagtgtctgcatttaggaagttagcagctgacaataagt +acagcctcatggaaactatgaaggttggttccgccctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggactgtaaaattcaaagagtgcgaaatattatacagagggtcaaagtaccgtgtctcatccgatg +gctgtgggaatgtctcagttactaaagtaaaagacatgatgtcacagaccaccaatgaggttcactcagcct +tgatcagattgagacaagcccgggctaggtactacattagttgcttccaagacctaatttacaccctcatcc +aggttgccggcgcttccttcgttgtgc---------------acagaa------tatcaaggaggttctcat +gggagcggtggatcaaaccctctgaggcc---------cttcccgaggatggccaagtcggc-----ctaac +ggataacactgag-a---ggtgggaggttgagccgaaagatgccgatccagagggcaagaaaggtaaaaaca +agaaaggcagaggcagaaaacacacagccttctctagcaagggcctcagtgatgaagagtatgatgaattca +agagagtgagggaagaaaggggtggaaagtacaccatcgaggaatacctccaagacagagaccgcttt---t +atgaagaggtagcggtagctcgtgccactgaagaggacttctgtgaggaagaaattgctaagatcagacagc +gggtctttaggcctaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcagaaaaaggaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaaggagtgtagact +acaatgagagattagactttgaggccccacctagcgtttggtcacgtatagtccccctgggtactggctggg +gattctgggtttcat-caaatctgctcataactaccactcatgtgctaccaaaaggtgttagggaactattt +ggtgttgacataaaacaagttcaaatacataaatcaggtgaattttgcagattcagatttccccgaccaatt +aggccagatgtgaccgggttaatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtgagg +agacccacaggggaaatgatccctcttgctgttaggatggggacacatgcctccatgaagatacaaggtaga +acagttggtgggcagatgggcatgcttctgaccggagcgaatgccaagaacatggacttgggcaccatacca +ggagactgtggctgtccatacatttacaagaggggtaatgacattgtagtagccggagttcacactgctgct +gcaagaggaggaaacactgtcatctgtgccacacaagggcctgacggagaggccgttttggaaggaggggac +gacaagggaacgtactgtggcgcgccgatacttagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaagcattgccaccaggaacgtacgaacctgcctacctgggtggcaaagacccc +agggttgaaaaaggaccttcgctccatcaggtcatgagagatcaattgaaacctttcaccgcgcccagggga +aaaccgccgaatcccactgtccttgaagaagccaagaagaccgttatgaatgtcctcgagcaaaccatagac +cctgcaaaaccttggacctatgctcaagcctgcgcttctcttgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaacggagaatctttcacgggacccttagctgaccaagcctctaaagcc +aacctaatgtatgaacaggcgaaacacgtcagtcctgtttatacagcagccctcaaggatgagttagtcaaa +actgacaagatctacaaaaagattaagaagaggttgttgtgggggtctgatctgggcactatgatcaggtgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggccttaccttgtagagtaggtatg +aacatgaatgaagatggccccatcatatttgacaagcactcaaaatacagattccattatgatgcagattac +t-ctaggtgggactcaacacagcaaaggtgcatcttggccgcagcaatggaggtcatgg-tgaagttctcag +ctgaacccgagct-ggcccaaatagttgcagaagacctgctagcccctagccaacttgatgttggggacttt +gtgatctccgtgcaggagggtcttccttctggtgtcccttgcacttcacaatggaactcaatagcacattgg +atcatcaccctaagtgctatggcagaagtgtctggtctctccccagaagttatacaggccaactcatgcttc +tctttttacggggatgatgagatagtgagcactgatattaacttggacccagccaaattgactcagaaattg +agggaatatggattagtgcccaccagaccagataagacagaaggccccttagttatcactgaaaacttgcat +ggactgacatttctgcgaagaactgtcactcgtgacccagcaggttggtttggaaaactggatcaagactca +attctaagacagctttactggacaagaggcccaaatcatgagaacccctacgaaagcatggtcccccactca +caacgtgccactcaactcatggcccttttgggggaagcctctctccatggaccccaattctacaagaaagtc +agcaagatggtcattaatgagataaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttt +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatcttgctcccgatggtgtgaatgaa +gatggcgtcgaatgacgcgagtccgtctag---tgacgggtcagccaacctcgtcccagagatcaacaatga +ggtgatggctcttgaaccagtagcaggtgctgctattgccgcaccagttgctggacaacaaaatataataga +tccctggattagaaataattttgtgcaggcccctggtggtgaatttacagtttccccaagaaatgcaccagg +ggaagtgctcctaaatttgcctttaagccctgatatcaacccatatttggcccatttgtcccgaatgtacaa +tggctatgcaggaggcgtggaggtagaggtggtcctcgctgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaatttccctcctgaaaaccttagcccaagccaaataactatgctcccccatat +tatagttgatgttaggcaattggaaccagtgcgcatacccttgccggatgtgcgcaacaatttctaccatta +ttcaagagaaaatgat---tccacattgaggttgattgcaatgctgtatactccccttagagctaataatgc +tggtgatgatgtcttcactgtctcctgcagggtgttaacaagaccctctcccgacttcgatttcatatttct +ggtgcctcctactgttgaatctaagtctaagccctttactatcccaatcttgactattgaggagatgactaa +ctccaga---tttcccgccccattggaaatgatgactactggcccgagccacgagattgtggtgcaaccgca +gaatgggcgctgcactatcgatggagtgctgctcggcaccacacaattgtctcctgttaacatctgctctat +gaggg-----------------------------------------gtgtcccgacaaagaggg-------- +----------ataatggaaaca------acaac--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcatcttgagaacatcaatggaaccccctatgatcctactgaagacatccctgc +cgtgctgggagcgcctgattttgtgggagtgttgtatgggacaatcagccaaa---ggagccccga------ +-----------------------caactcaacc--------agg-----------gcccaccccttcaccct +caacactggagatgacaggtacacccctaagttaggttccatagacatacaca---------ttgatgatgt +cgatgacat---gcaaaacaaccaaactgtga---------------------------aaatgaccccag- +--------tgggtttagctggattggaaagag---------gatcaaccacccaccagtggcaactaccaag +gtactccggggtg-gccacc------cacaacatgcacttggccccatctgtctcccctcttttccctggag +agcaaattcttttcttccggtcgacagtccccg------gctgtgggggtta------cccgg--------- +--acacaaaaattgactgcttaatcccccaggaatgggtccagcatttctaccaagagagcgccccagcgcg +cactgatgtggccctgctgagattcatcaacccggatactggcagggttctatttgagtgcaaattacataa +acaagggtacatcactgtggcctattcaggagttcatgatttggttatgccccctaatggatacttcagatt +tgagtcttgggtgaatcagtttcacactcttgcccccatgggaacaggttcgggcagaagg---------cg +catcc---------aataatggcaggagcattcttggcaaatttagctggtggtgtggcgtcaaacggaatc +gggtcattgatcaatgcagg---cgcgaacgccataaatcagagggtggaatatgatttcaacagacag--- +------------------------------ttacaaaatgcatcatttgcccatgacaaggacatgctccaa +gcacagattcaggcaacaaaacagcttcaacgcgacatgatggccatcaagcaggaggtcttgaccgcgggc +ggcttttcccctgctgatgccgcaagaggggcggttggggcaccaatgacaaaactagttgactggagtggt +acaaggtactgggcaccaaattctatgaagaccacaggctattccggaacttttagcagccaaccaatctca +ca-----------actcgcaactcaaccaa------------------------------------------ +-----------------------aagttgtg---aaacaacca----------------------------- +-----------------------------------gctccagggaaaaaccccccc--------------tc +agtcccct-----------caagtgg------------ttcttctgtgagttctc----------------- +---------------------ttgtgacaca---atcaacttccctacaga--------------------- +---gttc----c---cctagt-------------agatcagcatctagccaat---------caacgagcct +caccat-------------------tccc--------tctcattcaagaacatcagactgggtccgcagtca +gaatgacaggctgagccctttcatgg---gtggagcacttcaaacagcctttgtgactcccccatcaagtag +ggcttct---agtg------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcccatgt------------ttaacacacataggcagccactcttcgccc +atcttcgtaggcgaggggagtcacg--------agtctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP729312.1/1-7245 |Norovirus GII isolate OAS4 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------cccccccccaaatgg------tgaggac------gtggtt +tattacaaca----------gtaaaaatgacaccgttgatggcttgcctgacctgaccacagt---ccagga +tgagcatgaacattctccttacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattactccatatatgtcagcaacggcaaggc +gcttggcgtgcataaaccacccgctgctataagcgtcgccaccattgatttgactcccatatcattatactg +gaggccagtgtacactccac---catacctagtgcaccctgacactctcaagggccttgctggagagaaatt +tccatacacggcatttagcaacaattgttacaatttctgttgctgggttctggacttgaatgactcgtggct +gag---taggaaatccatatccagaacaactggtttctataaaccataccaatcatggaacaggaaacccct +ccccacagttgatgatgggaagatcaagaaggtggccaacgcagtgttgtgtgccctaggatcactgttctc +aaaacctatcaaagacttgcttggaaagttgaaacccctgaacttgcttaacctattggcatcatgtgattg +gacattcgccgggatagtggaaacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaattttatagcctctctgattggggactttgaaatgcaagggccggaagatctcgccgtgga +gcttgtgcccgtagtgatgggggggattggaatggttctgggcttcaccgcagaaaagatagggcgcatgct +ttcttcggccgcctccactttaagggcttgtaaagacctgggaaactacgccctggacatactcaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagccatagaagatgcggt +tcttgatatggaggcaataggcaataaccacctgactacactgctcaaagacaaagacagtctaaccgccta +catgaaaaccctggatttggaagaagaaaaggcacgaaagctttcaacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcacttctccacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctcaggaagacccggtatagggaaaacccatatggcgag +gcaattggccaaaacaatcgccggcacgatgactggagaccagagagtcggacttgttcctcgcaatggggt +tgatcattgggatgcctacaggggggagagagtggttctttgggacgattacggtatggggaatacaatcaa +ggatgccctcaccctgcaagaactggcggatacatgccccgtcacccttaactgtgacaggattgagaacaa +agggaaaatgtttgacagcgatgtcatcataataaccaccaatctagtcaacccagcacccctcgactacgt +caacttcgaggcctg-ctgcagaagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggatatgtggcgcgaccacttcaaaccagattcatcccatatcagactgt +ccctggcccctcaaggtgggtttgacaagaatggaaacaccccacatggaaaaggaacgatgaagaccctca +cccagggctccctcactgctcgagtagccggcttggtgcatgagaggagggacgagtttcagttccaagggg +atgaggtgcatctttacaactttgatgccaacagagtgtctgcatttaggaagttagcagctgacaataagt +acagcctcatggaaactatgaaggttggttccgccctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggactgtaaaattcaaagagtgcgaaatattatacagagggtcaaagtaccgtgtctcatccgatg +gctgtgggaatgtctcagttactaaagtaaaagacatgatgtcacagaccaccaatgaggttcactcagcct +tgatcagattgagacaagcccgggctaggtactacattagttgcttccaagacctaatttacaccctcatcc +aggttgccggcgcttccttcgttgtgc---------------acagaa------tatcaaggaggttctcat +gggagcggtggatcaaaccctctgaggcc---------cttcccgaggatggccaagtcggc-----ctaac +ggataacactgag-a---ggtgggaggttgagccgaaagatgccgatccagagggcaagaaaggtaaaaaca +agaaaggcagaggcagaaaacacacagccttctctagcaagggcctcagtgatgaagagtatgatgaattca +agagagtgagggaagaaaggggtggaaagtacaccatcgaggaatacctccaagacagagaccgcttt---t +atgaagaggtagcggtagctcgtgccactgaagaggacttctgtgaggaagaaattgctaagatcagacagc +gggtctttaggcctaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcagaaaaaggaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaaggagtgtagact +acaatgagagattagactttgaggccccacctagcgtttggtcacgtatagtccccctgggtactggctggg +gattctgggtttcat-caaatctgctcataactaccactcatgtgctaccaaaaggtgttagggaactattt +ggtgttgacataaaacaagttcaaatacataaatcaggtgaattttgcagattcagatttccccgaccaatt +aggccagatgtgaccgggttaatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtgagg +agacccacaggggaaatgatccctcttgctgttaggatggggacacatgcctccatgaagatacaaggtaga +acagttggtgggcagatgggcatgcttctgaccggagcgaatgccaagaacatggacttgggcaccatacca +ggagactgtggctgtccatacatttacaagaggggtaatgacattgtagtagccggagttcacactgctgct +gcaagaggaggaaacactgtcatctgtgccacacaagggcctgacggagaggccgttttggaaggaggggac +gacaagggaacgtactgtggcgcgccgatacttagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaagcattgccaccaggaacgtacgaacctgcctacctgggtggcaaagacccc +agggttgaaaaaggaccttcgctccatcaggtcatgagagatcaattgaaacctttcaccgcgcccagggga +aaaccgccgaatcccactgtccttgaagaagccaagaagaccgttatgaatgtcctcgagcaaaccatagac +cctgcaaaaccttggacctatgctcaagcctgcgcttctcttgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaacggagaatctttcacgggacccttagctgaccaagcctctaaagcc +aacctaatgtatgaacaggcgaaacacgtcagtcctgtttatacagcagccctcaaggatgagttagtcaaa +actgacaagatctacaaaaagattaagaagaggttgttgtgggggtctgatctgggcactatgatcaggtgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggccttaccttgtagagtaggtatg +aacatgaatgaagatggccccatcatatttgacaagcactcaaaatacagattccattatgatgcagattac +t-ctaggtgggactcaacacagcaaaggtgcatcttggccgcagcaatggaggtcatgg-tgaagttctcag +ctgaacccgagct-ggcccaaatagttgcagaagacctgctagcccctagccaacttgatgttggggacttt +gtgatctccgtgcaggagggtcttccttctggtgtcccttgcacttcacaatggaactcaatagcacattgg +atcatcaccctaagtgctatggcagaagtgtctggtctctccccagaagttatacaggccaactcatgcttc +tctttttacggggatgatgagatagtgagcactgatattaacttggacccagccaaattgactcagaaattg +agggaatatggattagtgcccaccagaccagataagacagaaggccccttagttatcactgaaaacttgcat +ggactgacatttctgcgaagaactgtcactcgtgacccagcaggttggtttggaaaactggatcaagactca +attctaagacagctttactggacaagaggcccaaatcatgagaacccctacgaaagcatggtcccccactca +caacgtgccactcaactcatggcccttttgggggaagcctctctccatggaccccaattctacaagaaagtc +agcaagatggtcattaatgagataaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttt +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatcttgctcccgatggtgtgaatgaa +gatggcgtcgaatgacgcgagtccgtctag---tgacgggtcagccaacctcgtcccagagatcaacaatga +ggtgatggctcttgaaccagtagcaggtgctgctattgccgcaccagttgctggacaacaaaatataataga +tccctggattagaaataattttgtgcaggcccctggtggtgaatttacagtttccccaagaaatgcaccagg +ggaagtgctcctaaatttgcctttaagccctgatatcaacccatatttggcccatttgtcccgaatgtacaa +tggctatgcaggaggcgtggaggtagaggtggtcctcgctgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaatttccctcctgaaaaccttagcccaagccaaataactatgctcccccatat +tatagttgatgttaggcaattggaaccagtgcgcatacccttgccggatgtgcgcaacaatttctaccatta +ttcaagagaaaatgat---tccacattgaggttgattgcaatgctgtatactccccttagagctaataatgc +tggtgatgatgtcttcactgtctcctgcagggtgttaacaagaccctctcccgacttcgatttcatatttct +ggtgcctcctactgttgaatctaagtctaagccctttactatcccaatcttgactattgaggagatgactaa +ctccaga---tttcccgccccattggaaatgatgactactggcccgagccacgagattgtggtgcaaccgca +gaatgggcgctgcactatcgatggagtgctgctcggcaccacacaattgtctcctgttaacatctgctctat +gaggg-----------------------------------------gtgtcccgacaaagaggg-------- +----------ataatggaaaca------acaac--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcatcttgagaacatcaatggaaccccctatgatcctactgaagacatccctgc +cgtgctgggagcgcctgattttgtgggagtgttgtatgggacaatcagccaaa---ggagccccga------ +-----------------------caactcaacc--------agg-----------gcccaccccttcaccct +caacactggagatgacaggtacacccctaagttaggttccatagacatacaca---------ttgatgatgt +cgatgacat---gcaaaacaaccaaactgtga---------------------------aaatgaccccag- +--------tgggtttagctggattggaaagag---------gatcaaccacccaccagtggcaactaccaag +gtactccggggtg-gccacc------cacaacatgcacttggccccatctgtctcccctcttttccctggag +agcaaattcttttcttccggtcgacagtccccg------gctgtgggggtta------cccgg--------- +--acacaaaaattgactgcttaatcccccaggaatgggtccagcatttctaccaagagagcgccccagcgcg +cactgatgtggccctgctgagattcatcaacccggatactggcagggttctatttgagtgcaaattacataa +acaagggtacatcactgtggcctattcaggagttcatgatttggttatgccccctaatggatacttcagatt +tgagtcttgggtgaatcagtttcacactcttgcccccatgggaacaggttcgggcagaagg---------cg +catcc---------aataatggcaggagcattcttggcaaatttagctggtggtgtggcgtcaaacggaatc +gggtcattgatcaatgcagg---cgcgaacgccataaatcagagggtggaatatgatttcaacagacag--- +------------------------------ttacaaaatgcatcatttgcccatgacaaggacatgctccaa +gcacagattcaggcaacaaaacagcttcaacgcgacatgatggccatcaagcaggaggtcttgaccgcgggc +ggcttttcccctgctgatgccgcaagaggggcggttggggcaccaatgacaaaactagttgactggagtggt +acaaggtactgggcaccaaattctatgaagaccacaggctattccggaacttttagcagccaaccaatctca +ca-----------actcgcaactcaaccaa------------------------------------------ +-----------------------aagttgtg---aaacaacca----------------------------- +-----------------------------------gctccagggaaaaaccccccc--------------tc +agtcccct-----------caagtgg------------ttcttctgtgagttctc----------------- +---------------------ttgtgacaca---atcaacttccctacaga--------------------- +---gttc----c---cctagt-------------agatcagcatctagccaat---------caacgagcct +caccat-------------------tccc--------tctcattcaagaacatcagactgggtccgcagtca +gaatgacaggctgagccctttcatgg---gtggagcacttcaaacagcctttgtgactcccccatcaagtag +ggcttct---agtg------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcccatgt------------ttaacacacataggcagccactcttcgccc +atcttcgtaggcgaggggagtcacg--------agtctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP729313.1/1-7245 |Norovirus GII isolate OAS5 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------cccccccccaaatgg------tgaggac------gtggtt +tattacaaca----------gtaaaaatgacaccgttgatggcttgcctgacctgaccacagt---ccagga +tgagcatgaacattctccttacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattactccatatatgtcagcaacggcaaggc +gcttggcgtgcataaaccacccgctgctataagcgtcgccaccattgatttgactcccatatcattatactg +gaggccagtgtacactccac---catacctagtgcaccctgacactctcaagggccttgctggagagaaatt +tccatacacggcatttagcaacaattgttacaatttctgttgctgggttctggacttgaatgactcgtggct +gag---taggaaatccatatccagaacaactggtttctataaaccataccaatcatggaacaggaaacccct +ccccacagttgatgatgggaagatcaagaaggtggccaacgcagtgttgtgtgccctaggatcactgttctc +aaaacctatcaaagacttgcttggaaagttgaaacccctgaacttgcttaacctattggcatcatgtgattg +gacattcgccgggatagtggaaacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaattttatagcctctctgattggggactttgaaatgcaagggccggaagatctcgccgtgga +gcttgtgcccgtagtgatgggggggattggaatggttctgggcttcaccgcagaaaagatagggcgcatgct +ttcttcggccgcctccactttaagggcttgtaaagacctgggaaactacgccctggacatactcaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagccatagaagatgcggt +tcttgatatggaggcaataggcaataaccacctgactacactgctcaaagacaaagacagtctaaccgccta +catgaaaaccctggatttggaagaagaaaaggcacgaaagctttcaacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcacttctccacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctcaggaagacccggtatagggaaaacccatatggcgag +gcaattggccaaaacaatcgccggcacgatgactggagaccagagagtcggacttgttcctcgcaatggggt +tgatcattgggatgcctacaggggggagagagtggttctttgggacgattacggtatggggaatacaatcaa +ggatgccctcaccctgcaagaactggcggatacatgccccgtcacccttaactgtgacaggattgagaacaa +agggaaaatgtttgacagcgatgtcatcataataaccaccaatctagtcaacccagcacccctcgactacgt +caacttcgaggcctg-ctgcagaagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggatatgtggcgcgaccacttcaaaccagattcatcccatatcagactgt +ccctggcccctcaaggtgggtttgacaagaatggaaacaccccacatggaaaaggaacgatgaagaccctca +cccagggctccctcactgctcgagtagccggcttggtgcatgagaggagggacgagtttcagttccaagggg +atgaggtgcatctttacaactttgatgccaacagagtgtctgcatttaggaagttagcagctgacaataagt +acagcctcatggaaactatgaaggttggttccgccctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggactgtaaaattcaaagagtgcgaaatattatacagagggtcaaagtaccgtgtctcatccgatg +gctgtgggaatgtctcagttactaaagtaaaagacatgatgtcacagaccaccaatgaggttcactcagcct +tgatcagattgagacaagcccgggctaggtactacattagttgcttccaagacctaatttacaccctcatcc +aggttgccggcgcttccttcgttgtgc---------------acagaa------tatcaaggaggttctcat +gggagcggtggatcaaaccctctgaggcc---------cttcccgaggatggccaagtcggc-----ctaac +ggataacactgag-a---ggtgggaggttgagccgaaagatgccgatccagagggcaagaaaggtaaaaaca +agaaaggcagaggcagaaaacacacagccttctctagcaagggcctcagtgatgaagagtatgatgaattca +agagagtgagggaagaaaggggtggaaagtacaccatcgaggaatacctccaagacagagaccgcttt---t +atgaagaggtagcggtagctcgtgccactgaagaggacttctgtgaggaagaaattgctaagatcagacagc +gggtctttaggcctaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcagaaaaaggaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaaggagtgtagact +acaatgagagattagactttgaggccccacctagcgtttggtcacgtatagtccccctgggtactggctggg +gattctgggtttcat-caaatctgctcataactaccactcatgtgctaccaaaaggtgttagggaactattt +ggtgttgacataaaacaagttcaaatacataaatcaggtgaattttgcagattcagatttccccgaccaatt +aggccagatgtgaccgggttaatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtgagg +agacccacaggggaaatgatccctcttgctgttaggatggggacacatgcctccatgaagatacaaggtaga +acagttggtgggcagatgggcatgcttctgaccggagcgaatgccaagaacatggacttgggcaccatacca +ggagactgtggctgtccatacatttacaagaggggtaatgacattgtagtagccggagttcacactgctgct +gcaagaggaggaaacactgtcatctgtgccacacaagggcctgacggagaggccgttttggaaggaggggac +gacaagggaacgtactgtggcgcgccgatacttagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaagcattgccaccaggaacgtacgaacctgcctacctgggtggcaaagacccc +agggttgaaaaaggaccttcgctccatcaggtcatgagagatcaattgaaacctttcaccgcgcccagggga +aaaccgccgaatcccactgtccttgaagaagccaagaagaccgttatgaatgtcctcgagcaaaccatagac +cctgcaaaaccttggacctatgctcaagcctgcgcttctcttgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaacggagaatctttcacgggacccttagctgaccaagcctctaaagcc +aacctaatgtatgaacaggcgaaacacgtcagtcctgtttatacagcagccctcaaggatgagttagtcaaa +actgacaagatctacaaaaagattaagaagaggttgttgtgggggtctgatctgggcactatgatcaggtgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggccttaccttgtagagtaggtatg +aacatgaatgaagatggccccatcatatttgacaagcactcaaaatacagattccattatgatgcagattac +t-ctaggtgggactcaacacagcaaaggtgcatcttggccgcagcaatggaggtcatgg-tgaagttctcag +ctgaacccgagct-ggcccaaatagttgcagaagacctgctagcccctagccaacttgatgttggggacttt +gtgatctccgtgcaggagggtcttccttctggtgtcccttgcacttcacaatggaactcaatagcacattgg +atcatcaccctaagtgctatggcagaagtgtctggtctctccccagaagttatacaggccaactcatgcttc +tctttttacggggatgatgagatagtgagcactgatattaacttggacccagccaaattgactcagaaattg +agggaatatggattagtgcccaccagaccagataagacagaaggccccttagttatcactgaaaacttgcat +ggactgacatttctgcgaagaactgtcactcgtgacccagcaggttggtttggaaaactggatcaagactca +attctaagacagctttactggacaagaggcccaaatcatgagaacccctacgaaagcatggtcccccactca +caacgtgccactcaactcatggcccttttgggggaagcctctctccatggaccccaattctacaagaaagtc +agcaagatggtcattaatgagataaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttt +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatcttgctcccgatggtgtgaatgaa +gatggcgtcgaatgacgcgagtccgtctag---tgacgggtcagccaacctcgtcccagagatcaacaatga +ggtgatggctcttgaaccagtagcaggtgctgctattgccgcaccagttgctggacaacaaaatataataga +tccctggattagaaataattttgtgcaggcccctggtggtgaatttacagtttccccaagaaatgcaccagg +ggaagtgctcctaaatttgcctttaagccctgatatcaacccatatttggcccatttgtcccgaatgtacaa +tggctatgcaggaggcgtggaggtagaggtggtcctcgctgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaatttccctcctgaaaaccttagcccaagccaaataactatgctcccccatat +tatagttgatgttaggcaattggaaccagtgcgcatacccttgccggatgtgcgcaacaatttctaccatta +ttcaagagaaaatgat---tccacattgaggttgattgcaatgctgtatactccccttagagctaataatgc +tggtgatgatgtcttcactgtctcctgcagggtgttaacaagaccctctcccgacttcgatttcatatttct +ggtgcctcctactgttgaatctaagtctaagccctttactatcccaatcttgactattgaggagatgactaa +ctccaga---tttcccgccccattggaaatgatgactactggcccgagccacgagattgtggtgcaaccgca +gaatgggcgctgcactatcgatggagtgctgctcggcaccacacaattgtctcctgttaacatctgctctat +gaggg-----------------------------------------gtgtcccgacaaagaggg-------- +----------ataatggaaaca------acaac--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcatcttgagaacatcaatggaaccccctatgatcctactgaagacatccctgc +cgtgctgggagcgcctgattttgtgggagtgttgtatgggacaatcagccaaa---ggagccccga------ +-----------------------caactcaacc--------agg-----------gcccaccccttcaccct +caacactggagatgacaggtacacccctaagttaggttccatagacatacaca---------ttgatgatgt +cgatgacat---gcaaaacaaccaaactgtga---------------------------aaatgaccccag- +--------tgggtttagctggattggaaagag---------gatcaaccacccaccagtggcaactaccaag +gtactccggggtg-gccacc------cacaacatgcacttggccccatctgtctcccctcttttccctggag +agcaaattcttttcttccggtcgacagtccccg------gctgtgggggtta------cccgg--------- +--acacaaaaattgactgcttaatcccccaggaatgggtccagcatttctaccaagagagcgccccagcgcg +cactgatgtggccctgctgagattcatcaacccggatactggcagggttctatttgagtgcaaattacataa +acaagggtacatcactgtggcctattcaggagttcatgatttggttatgccccctaatggatacttcagatt +tgagtcttgggtgaatcagtttcacactcttgcccccatgggaacaggttcgggcagaagg---------cg +catcc---------aataatggcaggagcattcttggcaaatttagctggtggtgtggcgtcaaacggaatc +gggtcattgatcaatgcagg---cgcgaacgccataaatcagagggtggaatatgatttcaacagacag--- +------------------------------ttacaaaatgcatcatttgcccatgacaaggacatgctccaa +gcacagattcaggcaacaaaacagcttcaacgcgacatgatggccatcaagcaggaggtcttgaccgcgggc +ggcttttcccctgctgatgccgcaagaggggcggttggggcaccaatgacaaaactagttgactggagtggt +acaaggtactgggcaccaaattctatgaagaccacaggctattccggaacttttagcagccaaccaatctca +ca-----------actcgcaactcaaccaa------------------------------------------ +-----------------------aagttgtg---aaacaacca----------------------------- +-----------------------------------gctccagggaaaaaccccccc--------------tc +agtcccct-----------caagtgg------------ttcttctgtgagttctc----------------- +---------------------ttgtgacaca---atcaacttccctacaga--------------------- +---gttc----c---cctagt-------------agatcagcatctagccaat---------caacgagcct +caccat-------------------tccc--------tctcattcaagaacatcagactgggtccgcagtca +gaatgacaggctgagccctttcatgg---gtggagcacttcaaacagcctttgtgactcccccatcaagtag +ggcttct---agtg------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcccatgt------------ttaacacacataggcagccactcttcgccc +atcttcgtaggcgaggggagtcacg--------agtctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP729314.1/1-7245 |Norovirus GII isolate OAS6 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------cccccccccaaatgg------tgaggac------gtggtt +tattacaaca----------gtaaaaatgacaccgttgatggcttgcctgacctgaccacagt---ccagga +tgagcatgaacattctccttacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattactccatatatgtcagcaacggcaaggc +gcttggcgtgcataaaccacccgctgctataagcgtcgccaccattgatttgactcccatatcattatactg +gaggccagtgtacactccac---catacctagtgcaccctgacactctcaagggccttgctggagagaaatt +tccatacacggcatttagcaacaattgttacaatttctgttgctgggttctggacttgaatgactcgtggct +gag---taggaaatccatatccagaacaactggtttctataaaccataccaatcatggaacaggaaacccct +ccccacagttgatgatgggaagatcaagaaggtggccaacgcagtgttgtgtgccctaggatcactgttctc +aaaacctatcaaagacttgcttggaaagttgaaacccctgaacttgcttaacctattggcatcatgtgattg +gacattcgccgggatagtggaaacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaattttatagcctctctgattggggactttgaaatgcaagggccggaagatctcgccgtgga +gcttgtgcccgtagtgatgggggggattggaatggttctgggcttcaccgcagaaaagatagggcgcatgct +ttcttcggccgcctccactttaagggcttgtaaagacctgggaaactacgccctggacatactcaagctggt +catgaaatggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagccatagaagatgcggt +tcttgatatggaggcaataggcaataaccacctgactacactgctcaaagacaaagacagtctaaccgccta +catgaaaaccctggatttggaagaagaaaaggcacgaaagctttcaacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcacttctccacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctcaggaagacccggtatagggaaaacccatatggcgag +gcaattggccaaaacaatcgccggcacgatgactggagaccagagagtcggacttgttcctcgcaatggggt +tgatcattgggatgcctacaggggggagagagtggttctttgggacgattacggtatggggaatacaatcaa +ggatgccctcaccctgcaagaactggcggatacatgccccgtcacccttaactgtgacaggattgagaacaa +agggaaaatgtttgacagcgatgtcatcataataaccaccaatctagtcaacccagcacccctcgactacgt +caacttcgaggcctg-ctgcagaagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggatatgtggcgcgaccacttcaaaccagattcatcccatatcagactgt +ccctggcccctcaaggtgggtttgacaagaatggaaacaccccacatggaaaaggaacgatgaagaccctca +cccagggctccctcactgctcgagtagccggcttggtgcatgagaggagggacgagtttcagttccaagggg +atgaggtgcatctttacaactttgatgccaacagagtgtctgcatttaggaagttagcagctgacaataagt +acagcctcatggaaactatgaaggttggttccgccctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggactgtaaaattcaaagagtgcgaaatattatacagagggtcaaagtaccgtgtctcatccgatg +gctgtgggaatgtctcagttactaaagtaaaagacatgatgtcacagaccaccaatgaggttcactcagcct +tgatcagattgagacaagcccgggctaggtactacattagttgcttccaagacctaatttacaccctcatcc +aggttgccggcgcttccttcgttgtgc---------------acagaa------tatcaaggaggttctcat +gggagcggtggatcaaaccctctgaggcc---------cttcccgaggatggccaagtcggc-----ctaac +ggataacactgag-a---ggtgggaggttgagccgaaagatgccgatccagagggcaagaaaggtaaaaaca +agaaaggcagaggcagaaaacacacagccttctctagcaagggcctcagtgatgaagagtatgatgaattca +agagagtgagggaagaaaggggtggaaagtacaccatcgaggaatacctccaagacagagaccgcttt---t +atgaagaggtagcggtagctcgtgccactgaagaggacttctgtgaggaagaaattgctaagatcagacagc +gggtctttaggcctaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcagaaaaaggaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaaggagtgtagact +acaatgagagattagactttgaggccccacctagcgtttggtcacgtatagtccccctgggtactggctggg +gattctgggtttcat-caaatctgctcataactaccactcatgtgctaccaaaaggtgttagggaactattt +ggtgttgacataaaacaagttcaaatacataaatcaggtgaattttgcagattcagatttccccgaccaatt +aggccagatgtgaccgggttaatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtgagg +agacccacaggggaaatgatccctcttgctgttaggatggggacacatgcctccatgaagatacaaggtaga +acagttggtgggcagatgggcatgcttctgaccggagcgaatgccaagaacatggacttgggcaccatacca +ggagactgtggctgtccatacatttacaagaggggtaatgacattgtagtagccggagttcacactgctgct +gcaagaggaggaaacactgtcatctgtgccacacaagggcctgacggagaggccgttttggaaggaggggac +gacaagggaacgtactgtggcgcgccgatacttagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaagcattgccaccaggaacgtacgaacctgcctacctgggtggcaaagacccc +agggttgaaaaaggaccttcgctccatcaggtcatgagagatcaattgaaacctttcaccgcgcccagggga +aaaccgccgaatcccactgtccttgaagaagccaagaagaccgttatgaatgtcctcgagcaaaccatagac +cctgcaaaaccttggacctatgctcaagcctgcgcttctcttgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaacggagaatctttcacgggacccttagctgaccaagcctctaaagcc +aacctaatgtatgaacaggcgaaacacgtcagtcctgtttatacagcagccctcaaggatgagttagtcaaa +actgacaagatctacaaaaagattaagaagaggttgttgtgggggtctgatctgggcactatgatcaggtgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggccttaccttgtagagtaggtatg +aacatgaatgaagatggccccatcatatttgacaagcactcaaaatacagattccattatgatgcagattac +t-ctaggtgggactcaacacagcaaaggtgcatcttggccgcagcaatggaggtcatgg-tgaagttctcag +ctgaacccgagct-ggcccaaatagttgcagaagacctgctagcccctagccaacttgatgttggggacttt +gtgatctccgtgcaggagggtcttccttctggtgtcccttgcacttcacaatggaactcaatagcacattgg +atcatcaccctaagtgctatggcagaagtgtctggtctctccccagaagttatacaggccaactcatgcttc +tctttttacggggatgatgagatagtgagcactgatattaacttggacccagccaaattgactcagaaattg +agggaatatggattagtgcccaccagaccagataagacagaaggccccttagttatcactgaaaacttgcat +ggactgacatttctgcgaagaactgtcactcgtgacccagcaggttggtttggaaaactggatcaagactca +attctaagacagctttactggacaagaggcccaaatcatgagaacccctacgaaagcatggtcccccactca +caacgtgccactcaactcatggcccttttgggggaagcctctctccatggaccccaattctacaagaaagtc +agcaagatggtcattaatgagataaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttt +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatcttgctcccgatggtgtgaatgaa +gatggcgtcgaatgacgcgagtccgtctag---tgacgggtcagccaacctcgtcccagagatcaacaatga +ggtgatggctcttgaaccagtagcaggtgctgctattgccgcaccagttgctggacaacaaaatataataga +tccctggattagaaataattttgtgcaggcccctggtggtgaatttacagtttccccaagaaatgcaccagg +ggaagtgctcctaaatttgcctttaagccctgatatcaacccatatttggcccatttgtcccgaatgtacaa +tggctatgcaggaggcgtggaggtagaggtggtcctcgctgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaatttccctcctgaaaaccttagcccaagccaaataactatgctcccccatat +tatagttgatgttaggcaattggaaccagtgcgcatacccttgccggatgtgcgcaacaatttctaccatta +ttcaagagaaaatgat---tccacattgaggttgattgcaatgctgtatactccccttagagctaataatgc +tggtgatgatgtcttcactgtctcctgcagggtgttaacaagaccctctcccgacttcgatttcatatttct +ggtgcctcctactgttgaatctaagtctaagccctttactatcccaatcttgactattgaggagatgactaa +ctccaga---tttcccgccccattggaaatgatgactactggcccgagccacgagattgtggtgcaaccgca +gaatgggcgctgcactatcgatggagtgctgctcggcaccacacaattgtctcctgttaacatctgctctat +gaggg-----------------------------------------gtgtcccgacaaagaggg-------- +----------ataatggaaaca------acaac--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcatcttgagaacatcaatggaaccccctatgatcctactgaagacatccctgc +cgtgctgggagcgcctgattttgtgggagtgttgtatgggacaatcagccaaa---ggagccccga------ +-----------------------caactcaacc--------agg-----------gcccaccccttcaccct +caacactggagatgacaggtacacccctaagttaggttccatagacatacaca---------ttgatgatgt +cgatgacat---gcaaaacaaccaaactgtga---------------------------aaatgaccccag- +--------tgggtttagctggattggaaagag---------gatcaaccacccaccagtggcaactaccaag +gtactccggggtg-gccacc------cacaacatgcacttggccccatctgtctcccctcttttccctggag +agcaaattcttttcttccggtcgacagtccccg------gctgtgggggtta------cccgg--------- +--acacaaaaattgactgcttaatcccccaggaatgggtccagcatttctaccaagagagcgccccagcgcg +cactgatgtggccctgctgagattcatcaacccggatactggcagggttctatttgagtgcaaattacataa +acaagggtacatcactgtggcctattcaggagttcatgatttggttatgccccctaatggatacttcagatt +tgagtcttgggtgaatcagtttcacactcttgcccccatgggaacaggttcgggcagaagg---------cg +catcc---------aataatggcaggagcattcttggcaaatttagctggtggtgtggcgtcaaacggaatc +gggtcattgatcaatgcagg---cgcgaacgccataaatcagagggtggaatatgatttcaacagacag--- +------------------------------ttacaaaatgcatcatttgcccatgacaaggacatgctccaa +gcacagattcaggcaacaaaacagcttcaacgcgacatgatggccatcaagcaggaggtcttgaccgcgggc +ggcttttcccctgctgatgccgcaagaggggcggttggggcaccaatgacaaaactagttgactggagtggt +acaaggtactgggcaccaaattctatgaagaccacaggctattccggaacttttagcagccaaccaatctca +ca-----------actcgcaactcaaccaa------------------------------------------ +-----------------------aagttgtg---aaacaacca----------------------------- +-----------------------------------gctccagggaaaaaccccccc--------------tc +agtcccct-----------caagtgg------------ttcttctgtgagttctc----------------- +---------------------ttgtgacaca---atcaacttccctacaga--------------------- +---gttc----c---cctagt-------------agatcagcatctagccaat---------caacgagcct +caccat-------------------tccc--------tctcattcaagaacatcagactgggtccgcagtca +gaatgacaggctgagccctttcatgg---gtggagcacttcaaacagcctttgtgactcccccatcaagtag +ggcttct---agtg------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcccatgt------------ttaacacacataggcagccactcttcgccc +atcttcgtaggcgaggggagtcacg--------agtctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OP712196.1/1-7587 |Norovirus GII isolate GII/Hu/RU/2022/GII.6[P7]/Nizhny_Novgorod14, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtaacaacaccgctccttctagtaaagaagaggc------tggtgcattttccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcagtga----------------ccagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaacgg------tgaagac------gccgtg +cagtttgacg----------cgaagtcagaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacatgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactcgagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggtccacaagccccctgcagcgataagcctcgcaacgatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctatacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaatagaaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctttgcgcgcttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaacttgttacacttgctcgcatcatgtgactg +gacgtttgcaggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttctggacaccgcc +agatgtttccagcttcatagcctctctgataggtgattttgaactgcaaggacctgaggaccttgctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccacctcacaaccctccttaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaggctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaagaagaaat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggtattggcaagacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgatcagagggtgggactcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttctgtgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtgactctaaactgtgataggattgagaacaa +agggaagatgtttgacagtgatgtcatcataattacgaccaatttagttaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagaatcaccagaaatcgagaaggtta +agagagacttccccggccaacctgacatgtggaaagaccattttaagcaagacttttcccacataaagctga +ctctagccccacagggtggatttgacaagaacggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagttccagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcgtttaggaagctggccgcagacaacaagt +acgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttagaagacctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtcgcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggcgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aggtggcccaaggca---aatgggagattgagccaaaggacacagaaccagaaggtaagaagggtaagaata +agaaagggagaggcaagaaacacacagctttctccagtaagggcctgagtgatgaggagtatgacgagttca +agagaattagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaaggccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgattttgaggctcccccgagtgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-caaaccttctgatcacaacgacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcaaattcataagtccggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaagatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcaaagaacatggacctaggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatctgtgccactcaagggctagatggggaagcagtccttgagggaaatgaa +aaccatggcacttactgcggtgccccaatcttaggtccaggcaaggcgcccaaacttagtacgaaaaccaag +ttctggcgctcatcaccagatgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacccagacctgcagttttagaagaagccaaaaagacagtaatgaatgttttagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacctccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgagctagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcataaccctcccatgcagggtaggaatg +aacatgaatgaggatggacccatcatatttgacaaacattctaagtataggtatcactatgatgctgactat +t-ccaggtgggactcaacccaacaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaattagatgttggcgatttc +gtcatctcagtccaggagggtctaccatcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtatcgggtctttcaccagacgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacgcaaaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgcaggtcgattgcacgggacccagctgggtggtttggaaagttgcaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcactcc +cagcgggccacgcaactcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagcccaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagccagttcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtattcacggtgtcttgtagagttctgacccgccctgctcccgactttgagttcacgtttct +ggtgccaccaactgtggagtcaaagactaagccctttacacttcccattctgactcttggggagctgtccaa +ctccaga---ttccccgctccgatagacatgctgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggtagatgcactctagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accatcct----------------- +----------ctccacgttcaactgaagaacctcgatgggacaccatatgatccaacagatgaggtgccggc +agttttgggtgccatagatttcaaaggaactgtatttggggtcgctagtcaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccccagatataccccaaagttaggctctgtgttgat---gt---------attctgagtc +tgctgattt---tgatgatggacaacctaccc---------------------------gcttcaccccca- +--------ttggaatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcat-cttact------ctcaacatgaacttggctcccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtaccat------ccgctggtggcta------tggat--------- +--caggtcacatagattgcctgattccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaagctgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +cgaggcctgggttaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcagtgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtgttggccactaaacagctccagcaagagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcaagaggtgctgtaaatgcaccgatgacaaaaattttggattggaatggg +actaggtactttgctccaaacagtatgaagacaaccagttactcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactctaacc---cgttctgaatc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcaactactactccttcac----------------- +---------------------aatcaaccca---ttcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggaccagcgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccataggcagcctctcttcgctc +atgttcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---c---tccttt +t------------cttt-----cttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaa---------------------------------------------------------- +- +>OP712197.1/1-7586 |Norovirus GII isolate GII/Hu/RU/2022/GII.3[P12]/Nizhny_Novgorod219, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagctt-cccccgagggaaataccacaa +agg---------------------ccaccacggccacccaccccagaactggtc-------aagaagatccc +ccc-----------------------------tcccccacccaatgg------ggaggatgagccagtggtc +tcttatagtg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctgtcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaactatcctggaaatgtgggacggggaaatctatcattatggtctgtatgtggagcgaggcctcgt +actcggtgtgcacaaaccaccagctgccatcagtcttgccaaggttgaactagcaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggctttttcagaccttaccaagaatggaacaggaaacccct +ccccactatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaagtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttaatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctgcaggggcctgaggaccttgcagtaga +actcgtgccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcgtccgctgcttccaccttaagagcttgtaaagacctcggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggaccttgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacgattaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttattatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcgtacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgatgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagcgatgccataatcatcaccactaatctagccaatccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgatatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcttcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacaag +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacaccactgttcagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcaggtattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agttcgtcgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcgttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggctaagatccgacaga +ggatcttcagaccaacaaggaaacaacgcaaagaggagagagcctctctcggtttagtcacaggttctgaaa +tcaggaagaggaacccagatgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ctagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttggtggtcaaatgggcatgcttctgacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttataagagggggaatgactacgtggtcatcggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaattttaggtccaggaagtgccccaaaactcagcaccaagactaag +ttctggagatcatccacggtaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggtccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaagaccaagtgtgctagaagctgccaagaaaaccattgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatccctggacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaaagtttatggtaagatcaaaaagaggcttctctggggttcggacctggcaaccatgattcggtgt +gctcgagcattcgggggtctaatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactat +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaaattttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactttctgaggtcacaaacctgtcccctgacattattcaggctaattccctcttt +tctttctacggtgatgatgaaattgtgagcacggacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctaaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagttca +atacttagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcgttctacagcaaaatt +agtaaactggtcattgcagagttgaaggagggtggtatggatttttacgtgccaagacaagagccgatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctaccccatctaa---tgatggtgctgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctagaaattcccctgg +tgaagtgctccttaatttggaattgggcccagaaataaatccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctgggaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccgattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacaccccttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaatttcct +tgtgccacccaccgtggagtcaaagacaaaaccttttaccctcccgattcttactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaacattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactaggt----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccccagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgatcctgcagaagatataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagtcaaa---gaaa------------ +-----cc------------ccgatagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggttcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagacttccaacaatggtccttacccga +ttactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--atgggatcctagattgcctggttccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggttttatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctttagttaatgcagg---ggctaatgcaatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagagattacaggctgatatgattgccatcaaacagggggttttgaccgctggc +ggcttttccccctctgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagcgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacaggaccacgccgaat---------------------------------t +ttaaaat----------------aaaccagtcccccagacccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccggatcgtcccgatcca--------------g +cgggtcta--------------------------------cagttgctagctcactac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacaaccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attgaatttga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>OP712198.1/1-7599 |Norovirus GII isolate GII/Hu/RU/2022/GII.4_Sydney[P16]/Nizhny_Novgorod567, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacatgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgctgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggctatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtccagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaattttgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +acggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatctccaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaggacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacctaaagggaagctttgggccgatgacaacagaagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgaccca +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaggcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagttagttaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacgcaacagagggcagtattagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtggatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggaatacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtctgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcacta +caatcagtcaaatgat---tccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacacaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaactg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatataattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------ac +caaatctt-----------ctaat------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccactatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggaccggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----tttt--ctttttc-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>OP712199.1/1-7581 |Norovirus GII isolate GII/Hu/RU/2022/GII.17[P17]/Nizhny_Novgorod755, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggtctaaacagccg-cccccgggagaaacaaaacaa +acacaaag---------------accaccaaggccaccgacaccggaattggtg-------aagaagatacc +ccc-----------------------------acccccccccaatgg------cgaggatgaaccaaagata +gcgtataagg----------tggg---agaaggtgtgtctgggctgcccgacttgacaaccgtggcacaacc +tgacgcacagagcacagcctacagtgtccccccacttagccagagagaggtcggcgaagctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actgggagtgcacaaaccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtttacactcccc---aatacttgatagctccagagacccttaagaatttaaatggagaggcttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcttagacctcaacgactcctggct +tag---cagaagaatgatccaaagaacaactggattcttcagaccgtatcaggactggaacagaaaaccctt +gccaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +taggcccatcaaagatgtcattggaaagctcaaaccactgaacattatgaacatactggcaacttgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgagctcttt---ggggtgttctggacgccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacactcagggcctgcaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgagttagccatggtgagggccattgaggatgcagt +tctggatttggaggcaatagaaaacaaccacatgaccactctccttaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaaggaaactgtcatccaaatcggcgtcacctgacatcgt +gggcacagtaaacgcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagaggcctgttgttgtaatgttatcaggtaggccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagcgggtggttctgtgggatgactatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataattataacaaccaacctcgcaaacccagcaccactggattatgt +caactttgaggcttg-ttctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +aacgtgacttccctggccaaccagatatgtggaaagaccattacagatcagacttctcacacattaaacttc +agctggcaccacagggaggctttgataagaatggcaacaccccacatggcaaaggtgtggttaaatctctga +cgattggttctctgatcgccagggcttctggcttgctccatgagagaatggatgaatttgagctccaaggct +ctggcttaccaaccttcaatttcgaccgtaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaaaactctggatgagctgaagcagg +ctataaagaacatcaccatcaagaagtgccagatagtgtacaatggatgcacctacaccatggaatctgatg +ggaggaacaaggttgtggttgaaaaggtccaaaatgcaacagtccaaaccaacaatgaacttgcaggagcac +tccaccacctgagatctgcaaggataaggtattatgttaaatgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcaccacacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgatga--------gcctgaagacaaaggggggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaagacattaaagcagaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggaggagaggaatggcaaatactcaattgaagaatacctccaggatagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccggcccaccaggaagcaacggagagaggaaagagccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaagccaaaaggaaaattgtgggctgatgacaacagaagtgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggtacaggatggg +gattctgggtctccc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagttcccattaaccaaattcaaattcacaaatctggagagttttgccgcttgcggtttccaaaaccaatc +aggccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggaactgatgcctctcgcagttagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcaaatgggcatgcttctcactggctcaaacgctaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggcgaagccaccctcgaaggaggtgac +aacaagggcacctattgtggagcccccatcttgggacctggcaacgcaccaaaattgagcacaaaaacaaaa +ttttggagatcttctaacgcgccgcttcctccaggtacctatgaaccagcataccttggtggaaaagacccg +cgtgtgaagggaggcccatctctacaacaggttatgagagatcaacttaaaccttttacagagcccaggggg +aagccaccaaaaccaagtgtcctagaatcagcaaagaagaccatcattaatgttctggagcaaaccattgac +ccccctgaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aaccttatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggctctgacctatccaccatgattcgatgc +gccagggcatttggtggcctcatggatgagctcaaagcaaattgtattacactccctgtcagagttggtatg +aacatgaatgaagatggccccataatatttgaaaagcactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagtt-ggcgcaaatagtggcaggggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaattgttatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattccattgcccactgg +ttactcaccctgtgtgccctgtctgaagtaacaggactaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaaattgactgcaaaactc +aaagaatatggtcttaaacctacccggcctgacaagactgaggggccactggtaattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcgggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaaggggacccaaccatgaagaccccagtgagactatgataccacacgca +cagagacctgtgcagctcatggcactgctaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataatga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttacttggctcatttgtcaaggatgtacaa +tgggtacgctggtggagttgaagtccaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacatat +aatagtagatgttaggactcttgaaccaattatgatcccattacctgatgttaggaacacattcttccacta +taataaccagcccaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggctc +aggtgatgatgttttcactgtttcttgcagggtcttgactaggcctactcttgattttgagttcacttatct +agtgccaccctctgttgaatctaagactaagcccttttccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccggtccccattgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgacggtgagctacaaggtacaacccagttgctcccatctggcatctgtgcgtt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgata------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacgtatgacccaactgacgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttgggatggcaagccaaa---gaaatgtgggt----- +------------aacgatgcgcccggctcaacc--------agg-----------gctcatgaggcggtgat +ttcaacctacagccccagatttgttcccaaattaggctctgtcaattttaaa------------agtaatga +caatgattt---ccaatt---gcagccaacaa---------------------------gattcacaccag- +--------tgggcatta---atgatgatgatg---------accacccgttcagacaatgggaactgccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattactcttcagatcttccgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctaccaggaatcagcaccttctca +gtcagacgtggccctgatcaggtacgtcaaccccgacacgggtcgcacactgtttgaggcaaaattgcacag +atctggctatatcactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcgggtgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcaacatgataaagagatgctccaa +gcgcaggtaaatgcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggggccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcgatattgggctcccaattccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatacccagcccgagt---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagcccag--------------------------- +------------------------------atctctaggttcttcttcttcgtctagt------------ag +t--gttta-----------tagta------------tg-------tctacccaattaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcttctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------caggacagcagagtgggtgaaccaaca +gag---aagtctcagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccttcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcaaccgtacccaa +ggaagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--atg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaa-- +------------------------------------------------------------------------ +- +>OP686903.1/1-7548 |Norovirus GII isolate Hu/US/2020/GII.10[P16]/CA-RGDS-1152, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggacacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +agatatgagg----------ttaa---gagtgggatttctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +attgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaatggagaggcatt +cccttataccgcctttgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacaggaaacccct +gcccacaatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacctataaaagatctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctctactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaagatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaacccaattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +taactttgaagcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcga +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacggtcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttgatggacaccatgagagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgtcagatcatctacggtggttccacgtatgatcttgaatctgatg +gcaggggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtacaagaagcagtctactccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gaa-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagaggaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagaaagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtgatccccgcaggcatgacagaagcattt +ggagtctccatcaaacaaatacagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcatctgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtaggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataagaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgaaggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggatatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcaacaggtaatgagagaccagttgaagccattcactgagcccaggggc +aagcctccaagaccaaatgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaaatggacatacgcacaagcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggagtggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtggacttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggtccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcactgacataaaattggaccctgaacagttaaccaccaaattg +aaggagtacggccaaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggatggtttggaaagctggaccagagctca +attttgaggcagatatactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccatact +caaagacccatacagctcatggcactgcttggtgaagccgctcttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaagaacccatgttt +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggttatggctcttgaacctgtagctggggcatctttagctgcccctgtgacgggtcaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagtttactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaactgggtcctgaattaaatccttatctggcacatttatccaggatgtacaa +tggctatgctggaggcatggaagttcagattatgctagctgggaacgcgttcactgc---tggcaaactgat +ctttgctgctgtgcctccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaaccttagaacctgtgttactccctatgcccgacatcaggaattccttctttcattt +catccagagggatgag---ccaaaaatgagattggtggcaatgttatacacaccactgaggtctaatggttc +tggagatgatgtattcacagtttcatgtagggttctgacccgtcccacccctgattttgattttacttactt +ggtgccaccaactgttgaatcaaagagtaaaccctttactttgcctatattaacattgggagaattgacaaa +ttctaga---tttcccttgcccattgacatgttgtacaccaatccaaatgaaagtgcagttgttcagtgtca +aaatggtaggtgcaccctggacggtgagctgcagggaacaacccaactcctgcccacaggcatctgcgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggtac------------ +------acactggaacatgacagtgaccaacttgaatgggactccgtttgatccaactgaggacatccctgc +cccactaggtactccggacttttccggtcaaatttatggggtaataagtcaga---gaaacaccaacacagt +tcccgca-----gaaggaaatcttccggccaac--------cgg-----------gctcatgaagctgtgat +tgcaacctacagtcccaaattcacacccaaattgggcaacattcaatttagta---------cttgggaaac +ccaagatgt---gagtactggacaacccacca---------------------------agttcaccccagt +tggc----ttggcctctgt-----ggatgctaactcccat---------tttgatcaatggactctccccag +ctactctggtgct-ttaact------ttaaatatgaatttggccccatctgtcgccccagtctttcctggag +agtgtcttctgttctttaggtctttcatccca------ctgaaggggggcta------tggga--------- +--accccgccattgattgcctgttgccacaagagtgggtccagcacctctatcaggagtcagcaccatctct +tagcgatgtggctttggtgaggtatgtgaacccagagactggacgcaccctctttgaagccaagttgcacag +gaatggattcctgactgttgctaggaacagcactggacctgtcgtggcccccacaaatgggtattttagatt +tgattcctgggtcaaccagttttacactttagcccccatgggaaatggcagtgggcgtaga---------ag +aatgc---------agtaatggctggagcttttgtagcaggtttggccggtgacgttcttagtaacggaatc +gggtcacttattaatgctgg---tgccaatgcaattaaccaaagagctgaatttgattttaataggcagtta +caacaaa---------------------------------attcttttaatcatgacaaagagatgctccag +gcccaagtccaagcaacaaagcagctgcaagcagacatgatcgccatcaagcaaggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagttaacgctcctatgacacaggctttggactggagtggc +acgagatattgggctccaggtgccatgaaaacatccagctattcaggcaggtttatatcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcag----------------cgtaagaatgctgcc---------------------------------- +-------------------------------ccctccactggctcttcttat------------------gg +tgggtctt-----------ctaga------------tctacagtctctactactcttg-------------- +----gttcttctgtat-----cttctagttc------tagagcttcaccc----ctaactca--------at +ctagtttgg---------------tttctaattcttcttc-----------at------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagactacctttgtcactcctccatcaagcaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcaca--------agtttag--t-----------gaaaagatta-------- +---a-t-t-------------------------------------------tt-------------cttttt +a-a----------attt---ctcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>OP686904.1/1-7533 |Norovirus GII isolate Hu/US/2020/GII.8[P8]/CA-RGDS-1153, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctggcaacttt---aacattgccaac +a------ac----agtgaaagcactccccctcccattaaggaagaggc------gagtgtcctatccaacgt +aaaagttggattcaagaaaa----tattgggggctgtgcctaagcagccc-------------aagccacc- +agaagtgaaaa------------ccaaagatcaacccagggtgctggtcaatggtaaggccctggaggtgcc +gcc-----------------------------cccaccaccaaatgg------tgaagac------gtggtt +tactataaca----------gcaaggatgacactgtgcacggcctaccaaatctaacaacagt---cagctg +tgaaggtgaaaaccttccgtacacagttcctcctctcagcgagagagagcacagggcagcaccagaaccatt +acctggcaccatactagagatgtgggatggtgaattctaccattatgcgatatatgtctctggtggtaaggc +cataggggtgcacaaacccccagctgcaatcagccttgctaccatcgagcttacacccatatcgctttactg +gaggcctgtctatgtcccca---attacttggtccaccctgacacactcaagagcttagctggtgaaaaatt +tccatacaccgcatttagcaacaattgttacaatttctgttgctgggttcttgacttgaaagactcgtggct +taa---ccgcaggtcaataactagaacaaccggtttcttcaagccttatcaaacctggaacaagaaaccact +cccgacggtggatgatggaaaaatcaagaaagtcgccaatgcagtcctgtgtgcccttggttcactattctc +aaaacctattaaggacttgatcgggaagctgaaaccattgaatttcttgaatctcctcgcttcgtgcgattg +gacattctccggagtggttgagaccgtcatactagctgctgaactattc---ggagtgttttggacccctcc +cgacgtgtcgaacttcatcgcgtcactcatcggggactttgagttgcagggtccagaggatttagctgtgga +gttggtgccgattatcatgggcggcatcgggatggtgctgggattcaccgccgagaagatcggccgaatgct +atcatcagctgcgtcgacccttagggcctgtaaagacctaggtaactatgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaggaggaaaaggcagagatggagaccttgagggccatagaggatgctgt +tttggacatggaggcgattggaaataatcacctcactgctctgttgaaagacagggacagtctcctaaccta +catgaagactctagacctcgaagaggaaaaggcaagaaagttatccacaaaatcatcttcccctgacatcgt +gggtaccatcaatgccatactagccagaattgccgcggctaggtctctcctacacagagctaaagaagaaat +gtacagcagacctaggcctgtcgtggtgatgatatcaggaagaccaggggttggcaaaacccatatggctag +acacctcgccaagagtgtggcgggcaccatgagcggtgaccaaagggtgggcctcatcccccgtaatggagt +tgatcactgggatgcctacaggggggaacgagtagtcttgtgggacgactatggcatgggcaacccagtgaa +ggacgcccttgctctgcaagaactagcagacacttgtccagtcaccctcaattgtgacaggatagagaataa +gggaaagatgtttgatagcgaggtaataattataacaaccaatctggccaaccccgccccgcttgattatgt +caactttgaggcatg-ttcccgcagaattgacttcctcgtctacgcagaggccccgaccattgagaaggcga +agaaagatttccccggacaaccagacatgtggaaggagcacttcaaagcagacttctctcatctcaaactca +cactggccccacaaggcggttttgacaagaacggcaacacgccacatgggaaggggactatgaagaccttga +cacagggttccctcacagcaagagtggctgggcttgtgcatgaaaggaaagacgagttccagttacagggtg +gagagttgcaggtctacaactttgacacaaacaaggtatcggctttcaggaagcttgctgcagacaacaact +atgggtttctggagacaatgagagtcggcacctcactcaaggacgtcaagacagtggaagaccttaaatgtg +cactcaagagtgtcagtttcaaagaatgtgaaataatctacaggaatgtcaagtaccgcatatcatcagacg +gttgcggtaaggtcagcatagagaaactggcagataacaactcccaaacaaccagagagattatcacggccg +tcactagactacgacaggctcgtgctaggtactacattagctgcttccaagacctagtctacacactcttgc +aggttgccggagcctcatttgtcatta---------------atagaa------tagttaagaagttcaact +gggaacgatgggtcaagaccccagaaacggatgaacccacaccaagtaatga-caagcccgac--------- +-----actgaagagg---aatgggagatcgcccccaaagatgtggactctgagggtaaaaaggggaagaaca +agaagggcagaggacgtaagcacactgcattctccagcaaagggcttagtgatgaggagtatgatgaattca +aaaggctgagggaagagaaacagggccgctacacaatagaggagtacctccaggacagagaccggtac---t +atgaagagctggcagtggcccgggccactgaagagaacttctgtgaagaggaagagataaagatcaggcaaa +gaatattccgccccaccaaaaagcagaggaaggaggagaggggggttctgggactcgtcacaggagcagaca +tcaggaaacggagacccgatgatttccaaccaaaaggaaaactgtgggcagatgattctaggagcgtcgact +acaatgagaagatcgagtttgaagctcctcctagcgtctggtcaagaatcgtcccgcttgggactggttggg +gattctgggtctcat-ccaacttactaatcaccaccacacatgtgctgcccaaaggcattaaagagcttttt +ggggtggacatcaaacaagtccaagtccacaaatcaggtgaattttgcagattcaggttcccaaaaccagtg +aggccagatgtctctgggttggtactagaagaaggggcccccgaaggcacagtgtgctctgttctcatcaag +aggtcaacaggagagatgatcccccttgcagtcaggatgggcacccacgcctctatgaagatccaggggcgc +actgttggcggccagatgggcatgctgctcactggagccaacgctaagaacatggatttaggcaccggcccc +ggggattgtggttgcccgtacatatacaagaggggcaatgacatcgtggtggccggcgtccacacagcagca +gcgcgcgggggcaacacggtcatctgcgcaacccaaggacctgatggtgaggcagtgttggaagggggagag +gaccacggcacttattgtggagctccaatattggcccctggtaaagcgccgaagcttagcacaaagactaag +ttttggcgctcatcccctgattcccttccccctgggacgtatgaaccagcttaccttgggggtaaggatccc +cgtgtggagaaagggccgtcactccaacaagtgatgcgagaccaactaaaacccttcacagaacccaggggc +aagccacctaggccgtcagtgctggaggaagccaagaagacagtcatgaatgtactggagcagaccatagaa +ccagctaagccatggacctactctcaagcctgtgcttcattggataaaacaacatccagtggcagtcctcac +cacgtcaggaagaatgaacactggaacggggagtctttcactgggcctcttgcagatcaagcctcaaaagcc +aacctgatgtatgaggagggtaaacacatggaccctatgtacacagcagccctcaaggacgagttggtgaaa +actgacaaaatctataagaaaatcaagaagaggttgttgtgggggtctgatctggggacaatggtaaggtgt +gctcgagcgtttggaggattgctcgacagcatgaaagagagttgcatctccttaccctgtagggttggcatg +aacataaacgaagatggaccactcatatttgaaaaacattccaaatacacctatcactatgatgctgactac +t-ctaggtgggactcaacgcaacagagggctgtcctgagtgcagccatggaggtaatgg-tgaagttctctg +ctgagccggaact-ggctcaggtggttgccgaagacctccttgcacccagccgtcttgacgtgggtgacttc +gtcgtctccgtccaagaaggtcttccatcgggtgtcccctgcacgtcacagtggaactcaatcgctcactgg +atcctgactcttagtgctatgtctgaggtctctggtctttcccctgaggttgtgcaagccaactcctgtttc +tcattctatggggatgatgaaatagtcagcacagatataaacctagacccagaaaaactcaccaggaaactg +agggagtatggcctcgtcccaacaaggccagacaaaactgagggcccacttgtgatcactcaggatttgaat +ggtctcacattcttgaggcggaccatagtgcgggaccccgcaggttggtttggaaaattggatcgtgattcc +attctaaggcagttatactggaccagaggacccaatcatgagaacccctttgaaagtatgattccccactcc +cagagagcaacccagttaatggcccttcttggggaagcctcgttgcatggtccccaattttacaagaaggtg +agtaaaatggtcatcaatgagatcaagagtggtggtctggagttttacgtgcccagacaggaggccatgttt +agatggatgagattttcagacctcagcacgtgggagggcgatcgcaatctggctcccgagaatgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggcgcggctggcctcgtaccagagatcaaccatga +ggtcatggccatagagcctgttgcaggggcctctctagcagcccctgtcgtaggacaacttaatataattga +tccctggattagaaataattttgtacaagcccctgctggagaattcactgtttcgcctagaaatgctccagg +tgaatttttgttagatttagagttaggtccagaattgaatccttatcttgctcaccttgcacgcatgtataa +tgggcatgcaggtggtatggaggtgcagatagtgcttgctgggaatgcgttcacagc---gggcaaaatact +gtttgcagtcataccacctggattcccctatgaaaatttgtcacctgcacaattgaccatgtgcccacacgt +agtggtggatgtgaggcagctagaaccaatactgctgcccatgccagacatccgtaatacattcttccatta +caatcagagcaatggg---ccaaaactcagattagtagctatgctttacacacccctaagggctaacaatgc +tggtgatgatgtcttcacagtctcctgcagggttctgactcgtccatcaccagattttgaattcaactttct +tgtccccccatctgttgaatctaagactaaagctttcactcttccaattcttaagacatctgagatgacaaa +ttcaaga---tttcccataccagttgaccagatgtatactagtaggaatgaaaatatagttgttcaaccaca +gaatggcagggtgacacttgatggagagttacagggcacaaccacactccaaccggtgtccatttgtggctt +tcggg-----------------------------------------ggacgctgcagaccagg--------- +-----------------------ctg--gc----------------------------agatcaaccaa--- +--attacaca-------------------------------------------------------------- +----------taccaagtgcaccttgagaatttggacggctcacccgtcgatccgacagatgaagtcccagc +ccccctggggacgccagattttcaggcccaactgtttggagttgtcagccaaa---ggagtagtga------ +-----------------------taatgccacc--------agg-----------gcacatgaggctagggt +caacaccaacgatcctaccttcgcgccccagatcgcccaggtgcgttt---ca---------aatcaccatc +ccacgactt---ctttgacaatgaacccatca---------------------------agttcacaccag- +--------ttggaattagtgttg---atagcg---------aaaacagctacaaccaatggctccttcccag +gtatggcgggcac-ttgaca------aacaacactcacctggccccctctgtgtccccaatgttccccggcg +agcagattctcttcttccgctcgttcatgccag------gtgccagtggtca------tactg--------- +--atggcgctattgactgccttttaccacaagagtgggttgcccacttctatcaggaggccgcaactgccca +aacagatgtggctctgattagatttgtgaaccccgacacaggcagagtgctatttgaagggaagctacacaa +gcagggctttataaccatctccaacagtggggaccaccccattgttatgcctgctaatggatacttcaggtt +tgaggcatgggtcaaccaattttactctctcgcccccgtgggaaccggaagtgggcgcaga---------ag +gattc---------aataatggctggagcttttcttgcgggtctggctggtgatgtggtgacctctggcatc +gggtcgctcatcaatgcagg---tgccaatgcagtaaaccaaaaggttgaatatgatttcaataggcaa--- +------------------------------cttcaagaagcttcttttaaacatgacaaggagatgttgaat +gctcaaattaatgccactaccaaattgcagagggacatgattgccatcaagcagggggttttgaccgctggc +ggcttttcccccactgatgctgcaagaggttccatcaatgctccaaccaccaaaattcttgactggaatgga +tctaggtactgggcgccaggatcaatgagaacaacagcatactctggcaatttcatatcacagggagttaag +ca-----------gcctacacccattgtta--aatctgtggaac---------------------------c +ccaagt-----------------acagcaatct--------------------------------------- +----------------------------------------------------------------------cc +tgcccctt-----------cttctgttta---ttctgtaggttctgttaagtcac----------------- +---------------------aatcaacaca---atcaactcaattaacag----ggtcagg--------ga +ctgtgtc--------------------------------aagggcacccaccc---------cctcaacaac +cacaac-------------------act--------------gtccagaacaagtgagtgggtgaggagcca +gaatgataggctgagcccctttatgg---gaggcgcactccagacagctttcatcacgcccccatcgagtaa +ggcttcatcctcat------------------------------caggaa---cagtctcaaccgttcctag +agaaattttgga-ctcctggactcctgtat------------ttaacacacgcaggcagccgctcttcgccc +acatgcgtaggcgaggggagtcacg--------ggcttag--t-----------gaaaagaatg-------- +-------att-tggttag-----------------attatat------ct-ttttctta---cctattctat +c------------tttt-----------aaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>OP689557.1/1-7545 |Norovirus GII isolate Hu/US/2022/GII.2[P16]/CA-RGDS-1162, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcctattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgaaagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctagtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaggttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttggggacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagagtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaagttacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctaattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatat +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgagaaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagccttcgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>OP689558.1/1-7545 |Norovirus GII isolate Hu/US/2022/GII.2[P16]/CA-RGDS-1163, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcctattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcaccccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggacttataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgaaagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctagtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaggttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------aacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttggggacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagagtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctaattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgagaaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagccttcgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>OP689689.1/1-7565 |Norovirus GII isolate Hu/US/2022/GII.17[P17]/CA-RGDS-1164, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttactcttaagaaag----ccctcggggcgcggtctaaacagccg-cccccgggagaaacaaaacaa +acacaaag---------------accaccaaggccaccgacaccggaattggtg-------aagaagatacc +ccc-----------------------------acccccccccaatgg------cgaggatgaaccaaagata +gcgtataagg----------tggg---agaaggtgtgtctgggctgcccgacttaacaaccgtggcacaacc +tgacgcacagaacacagcctatagtgtccccccactcagccagagagaggtcggcgaggctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcttgt +actgggagtgcacaaaccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtttacactcccc---agtatttgatagctccagagacccttaagaatttaaacggagaggcttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---cagaagaatgatccaaagaacaactggattcttcagaccgtatcaggactggaatagaaaaccctt +gccaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +taggcccatcaaagatgtcattggaaagcttaaaccactgaacattatgaacatactggcaatttgtgattg +gacttttgcgggtatagtggaatccatgatccttcttgctgagctcttt---ggagtgttctggacgccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacttggccgtgga +acttgtgcccgtggtaatgggaggaataggtctggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagccgcgaccacactcagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccagcgagttagccatggtgagggccattgaggatgcagt +tctggatttggaggcaatagaaaacaaccacatgaccactctccttaaggacaaagacagcctggccacata +catgaggtctcttgacttggaagaagaaaaagcaaggaaactgtcatccaaatcggcgtcacctgacatcgt +gggcacagtaaacgcattattggcgaggatagcagccgccaggtcactggtccacaaggctaaggaagagct +ctcgagcagacagaggcctgttgttgtaatgatatcaggtaggccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagcgggtggttctgtgggatgactatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataatcataacaaccaaccttgcaaacccagcaccactggattatgt +caactttgaggcttg-ttccaggcgcatagacttcttggtgtatgcagacgcacctgacatcgagaaagcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagatcagacttctcacacattaaacttc +agctggcaccacagggaggctttgataagaatggcaacaccccacatggcaaaggtgtggttaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccatgagagaatggatgaattcgagctccaaggct +ctgacttaccaaccttcaatttcgaccgtaacaaagttgccgccttcagacaattggcagctgaaaacaaat +atggtcttgtggacacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaagcagg +ctataaagaacatcaccatcaagaagtgccagatagtgtacaatggatgcacctacaccatggaatctgatg +ggaggaacaaggttgtggttgaaaaggttcaaaatgcaacagtccaaaccaacaatgaacttgcaggagcac +tccaccacctgagatctgcaaggataaggtattatgtcaaatgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcaccacacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgacga--------gcctgaagacaaaggggggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaggacattaaagaagaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaggagtacgatgagtaca +agagaatcagggaggagagaaatggcaaatactcaatagaagaatacctccaggatagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccggcccaccaggaagcaacggagagaggaaagagccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaagccaaaaggaaaattgtgggctgatgacaacagaagtgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggtacaggatggg +gattctgggtctccc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagttcccattaaccaaattcaaattcacaaatctggagagttttgccgcttgcggtttccaaaaccaatc +aggccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +agaacaacaggggaactgatgcctctcgcagttagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcaaatgggcatgcttctcactggctcaaacgctaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccatacatatacaaaagaggcaatgacttcgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggcgaagccaccctcgaaggaggtgac +aataagggcacctattgtggagcccccatcttgggacctggcaacgcaccaaaattgagcacaaaaacaaag +ttctggagatcttctaacgcgccgcttcctccaggcacctatgaaccagcataccttggtggaaaagacccg +cgtgtgaagggaggcccatctctacaacaggttatgagagaccaacttaaaccttttacagagcccagaggg +aagcccccaaaaccaagtgtcctagaatcagcaaagaagaccatcattaatgtcctggaacaaaccattgac +ccccctgaaaagtggtcatatgcccaagcttgtgcatctctcgacaagacaacctccagtggatacccgcat +cacgttcggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aaccttatgtatgaggaaggcaaacacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggctctgacctatccaccatgattcggtgc +gccagggcatttggtggcctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aacatgaatgaagatggtcccataatatttgaaaagcactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtactggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagtt-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaattactatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtaacaggactaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgactgcaaaactc +aaagaatatggtcttaaacccacccggcctgacaagactgaggggccactggtaattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcgggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaaggggacccaaccatgaagatcccagtgagactatgataccacacgca +cagagacctgtgcagctcatggcactgctaggagagtcctccctacatggaccctcattttacagcaaagtt +agcaagctggtcatatctgaacttaaagaggggggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgagattctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgttactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacctagaaactctcctgg +agaaattttgctaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagttgaagttcaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacatat +aatagtagatgttaggactcttgaaccaattatgatcccattacctgatgttaggaacacattcttccacta +taataaccagcccaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggttc +aggtgatgatgttttcactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttatct +agtgccaccctctgttgaatctaagactaagcccttttctttacccattctaaccctttctgagctcacaaa +ttcgagg---ttcccggtccccattgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgacggtgagctacaaggcacaacccagttgctcccatctggcatctgtgcgtt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttgggatggcaagccaaa---gaaatgtgggc----- +------------aacgatgcgcccggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctacagccccagatttgttcccaaattaggctctgtcaattttaaa------------agtaatga +cgatgattt---ccaatt---gcagccaacaa---------------------------gattcacaccag- +--------tgggcatta---atgatgatggcg---------accacccgttcagacaatgggaactgccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattactcttcagatcttccgtgccat------gttcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctaccaggaatcagcaccttctca +gtcagacgtggccctgatcaggtacgtcaaccccgacacgggtcgcacactgtttgaggcaaaactgcacag +atctggctatatcactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagccttcattgcaggattggcgggtgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcagccaaaagatagactttgaaaacagcaagcaa--- +------------------------------ctccagtctgcttcttttcaacatgataaagagatgctccaa +gaacaggtgaatgcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggggccatcggtgcacccatgacaagggtgcttgactggtctggc +actcgatactgggctcccaattctacaaagacaactggttattcggggcaattcacctcctca--------- +cc--------------tgtgcacatgcccagcccgagc---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagcccag--------------------------- +------------------------------gtctctaggttcttcttcttcttctagt------------ag +t--gttta-----------tagta------------tg-------tctacccaatcaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcttctactaaactgacaaatc +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtctcagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccttcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +gggagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaac-------- +-------aat-tggcta---taat--atg-----atttct-----------ttaa----aaatttaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>OP690425.1/1-7560 |Norovirus GII isolate Hu/US/2022/GII.6[P7]/CA-RGDS-1156, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agttttaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactactccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaattagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccggacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaacgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttaggcaaacttaaaccattgaacttgttgcacttgctcgcgtcatgtgattg +gacgtttgcgggcatagtggagacagttatcctaatggcagaacttttc---aatatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatctcacaaccctcctcaaagataaggatagcctcacggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggtactatcaatgccatactggccagaatagctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcgag +acacttggccaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccagcctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggaatcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctgttgacaaagttgagggccaaacgtcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactctaatgc +aggttgccggagcatcattcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagagatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcacaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaagaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagaggagaccagatgatttccaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccaaatggggatgctcctcacaggggctaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgcccttatatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaataccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgcagggtaggaatg +aacatgaacgaagatggtcccatcatatttgacaagcactctaagtacaggtatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaggtggtcgcagaggaccttctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtatcaggtctctcaccagatgtagttcaagcccactcctgtttc +tcattttacggtgacgatgagatcgtcagcactgacataaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggcccccacccggcctgataaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattggaccaggactca +atcctcaggcagttatattggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaagcctcactgcatggcccccagttctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgactgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaacttaacccttacctaagtcatttgtcccgcatgtacaa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgaggcaacttgaaccagtacttttgcccctccctgacataaggaacaggttcttccatta +caatcaggaagacacc---ccccggatgaggcttgtggcaatgctttatactcccctgagggc---taattc +tggtgaagatgtgtttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctagg---ttcccagccccgatagacatgttgtacactgacccaaatgagggggttgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcaaactaattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattagagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +aacccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----cc---aagtgggg---------gcaacc--------cga-----------gcccatgaggtgcacat +taacacgaccgatcccaggtatacaccaaaactggggtccatcctcat---gt---------actcagagtc +gctagactt---tgagactggacagccggtcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgattggcaccagtgggagctgcctga +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ccgctggtggcta------tgggt--------- +--ctggacagatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaagctgcatag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtatttcaggtt +tgaagcttgggtgaatcaattttatactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaagtggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtttcagcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctctccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ctagatc----a---tccag-------------------gcccactaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcctt------ct-tttctttt---c---tctctt +t------------taaa-----------aaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>OP690426.1/1-7560 |Norovirus GII isolate Hu/US/2022/GII.6[P7]/CA-RGDS-1157, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agttttaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactactccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaattagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccggacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaacgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttaggcaaacttaaaccattgaacttgttgcacttgctcgcgtcatgtgattg +gacgtttgcgggcatagtggagacagttatcctaatggcagaacttttc---aatatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatctcacaaccctcctcaaagataaggatagcctcacggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggtactatcaatgccatactggccagaatagctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcgag +acacttggccaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccagcctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggaatcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctgttgacaaagttgagggccaaacgtcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactctaatgc +aggttgccggagcatcattcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagagatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcacaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaagaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagaggagaccagatgatttccaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccaaatggggatgctcctcacaggggctaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgcccttatatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaataccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgcagggtaggaatg +aacatgaacgaagatggtcccatcatatttgacaagcactctaagtacaggtatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaggtggtcgcagaggaccttctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtatcaggtctctcaccagatgtagttcaagcccactcctgtttc +tcattttacggtgacgatgagatcgtcagcactgacataaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggcccccacccggcctgataaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattggaccaggactca +atcctcaggcagttatattggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaagcctcactgcatggcccccagttctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgactgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaacttaacccttacctaagtcatttgtcccgcatgtacaa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgaggcaacttgaaccagtacttttgcccctccctgacataaggaacaggttcttccatta +caatcaggaagacacc---ccccggatgaggcttgtggcaatgctttatactcccctgagggc---taattc +tggtgaagatgtgtttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctagg---ttcccagccccgatagacatgttgtacactgacccaaatgagggggttgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcaaactaattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattagagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +aacccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----cc---aagtgggg---------gcaacc--------cga-----------gcccatgaggtgcacat +taacacgaccgatcccaggtatacaccaaaactggggtccatcctcat---gt---------actcagagtc +gctagactt---tgagactggacagccggtcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgattggcaccagtgggagctgcctga +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ccgctggtggcta------tgggt--------- +--ctggacagatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaagctgcatag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtatttcaggtt +tgaagcttgggtgaatcaattttatactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaagtggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtttcagcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctctccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ctagatc----a---tccag-------------------gcccactaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcctt------ct-tttctttt---c---tctctt +t------------taaa-----------aaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>OP690427.1/1-7527 |Norovirus GII isolate Hu/US/2021/GII.12[P16]/CA-RGDS-1154, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +agg---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ctc-----------------------------tcctccacctaatggtgaagaagaagaagaaccagttatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggctaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaacgattcatggct +tag---caggagaatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctaatactatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctataatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcggcagcatcaacactcagggcttgcaaagatcttggtgcatatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgatagtgaagtcataataatcacaacaaaccttgccaacccagccccgcttgattatgt +caactttgaggcctg-ctccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagcttc +agcttgcgcctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcgtctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggttaagaacgcctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaggagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccccgaagacttcaaacctaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gtttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcgggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttggggacaactcct +ggagactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgtcaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcattgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggtcatccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgt +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacactccagatacaactatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaagtcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagatttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttgaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +cagaggcccatacagctcatggcactacttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctttaccagatgtcagaaataatttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtttcctgtagggtgctcactagaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccccgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaatgggaggtgcgcgctggatggggagttgcagggcaccacccagctcctccccacggcgatttgctcatt +taggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgctgtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtgcaaattggca---------catgggaaca +agatgatgt---acatatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagaatggatccaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggcagtagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggccggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccactaaacagctacaggctgacatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaatgcgcccatgacccaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ctag---------------- +------------------------------ttctattgcttctactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcttctaatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------ttaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-a-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aaattt-c--t---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>OP690505.1/1-7573 |Norovirus GII isolate Hu/US/2022/GII.3[P25]/CA-RGDS-1158, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggcaaaaccagcacaaacagt +gaaattcac----aaccaagatgtaaacactacatcaagc------------------ctcttcgccaacat +gaccgttggcttgaagaggg----ccctgggggcgaggccaaaacagtctgcccccagggcttcctccccca +atagggaggggaagtctgaaaccaccactaggactccccccctaaacaagggaggaag--ggacaacacccc +ccaaatacccc--------------------ccccgccacccaatgg------tgaggacataatcatcaaa +tacaccaaac----------agga---tgatgtgattgcaggggtgcccactgtcgctacggtggacgtccc +cccaacacacaacaccgcctacagtgtccctcccttggatcagagggagaaggttgaggcaaaggaacccct +gacaggctcaataattgagatgtgggatggtgaaattttccattatgggctctatgttgagaagggcttggt +tcttggagtgcacaaacccccggctgccataagctttgcacgcatagagctcacccccctctctttatactg +gagaacagtctacacaccac---cttatctagtggccccagaaacacttaggagactccacggggagtcgtt +cccatacaatgcatttgacaataattgctactccttctgctgttgggtcttggacctgaacgattcctggct +taa---cagaaagtttgtttcgagaactacaggtttctacagaccctaccaagagtggaacagaaagcccct +accgaccatggatgagggaaaactcaagaaagtggccaatgtgctactgtgtggtctctccggtcttttcac +cagaccaatcaaggacctcatagggaaactaagaccattgaacatactcaatatcatcaccaattgtgattg +gacttttcccggggttgtggaagctctcatattacttgcagaactcttc---ggagtcttctggacaccacc +agacatttctacttttatagcatcacttctgggtgattatgaaatgcagggccccgaggacattgcagttga +agttgtgccagtaattctcggtggcataggcatggtgctcgggttcaccaaagagagaatcggccggttgct +gagctctgccgcttcttcgcttagggcgtgcagagagatcggcaattacggaatagaagtggtaaagttggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggacatggtgagggcaatagaggatgccgt +gctcgactttgaggccatacaaaacaaccacatgacagcattactcaaagacaaaaatagcctagcaacctt +ccttagggagttagacatggaagaggagaaagcgcggaagttatcaacaaagtccgcgtccccagacatcat +tggcaccataaacgcccttctagccaggattgccgccgctaggtccctagtccacaaggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcattatgatctctggccgacctgggataggaaagacacatctagcccg +cgacctggccaaaaagatggcggcaaccctctcaggtgaccagagggtagggctcgtgccaaggaacggtgt +cgatcattgggacgcatacaaaggggagagaattgtgctctgggatgactatggaatgagcaaccctgtgac +cgacgcgctgcggctccaagagcttgccgacacatgccccttgacgctcaactgtgataggatagagaacaa +ggggaaggtctttgatagtgacactataattatcaccaccaatttggccaatcctgcccctctagattatgt +taattttgaagcttg-ctctcgccgaattgatttccttgtctatgcggactccccctcggttgataaggcga +agagagacttccccggccaaccagatatgtggaaggacgcatttaaaccagacttttcccacataaaactcc +aactggcaccacaagggggctttgataagaacggaaacaccccccatgggaagggtgtcatgaaatcactga +ctacacattcccttattgcccgtgccacgggtctgttacatgagaggttggatgagttcgacctacaggggc +ctgaactacctgtgtacaattttgaccaaaacagggtggccgcttttagaaagcttgcggctgacaacaagt +acgggctcgtggaaaccataaaagtgggcaacaaactgaagagtgtcaggactctagaacaacttaaggatg +ccttaaaagacataagtatcaagccttgcagaataatctacaactccatggcttatgatctcgactcgaatg +ggtcaggaagggttaacgtcaaaaaggttgtggatcataaagtccaaactaacaatgaactcaactccgcgc +ttaacaacctgcgtggcgccagggtaagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaagaatgacgcgaagattaa------acgtcagtggtatctggg +ccaggccaga------------aaaaca--------ggtggaggccattgaagaacccccagtcccccca-- +--------tctgaag---attggactataaccccatcagatgcaatccaagagggcaagaagggcaagaaca +aaagtggcagaggtaagaaacacactgccttctccagcaaaggcctgagcgatgaggagtatgatgaattta +aaagaatcagggaagagaggcagggaaaatattccatagaagaatacctccaggacagagaccggtac---t +atgaggaattggccatagccaaagctacagaagaaaacttctgtgaggaggaagaaataaaaattagacaga +gggtcttccgcccaaccagaaaacaacgtagggaagaaagggcgaccctaggactggtcacgggtagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaaaggaaaattgtgggctgatgatgaccgcagtgtaaact +acaatgagaaaatagatttcgaggcccctcctagcctttggtcccgaatagtgaattttgggtcaggatggg +gtttctgggtgtctt-ctaacctgttgatcacatcaacacatgtcatccccccgaacatgactgaggctttt +ggtgtaccaataagccagatacaaatacacagaagtggagagttctgcaaaatgaggttccccaaggctata +agacctgatgtctcgggcatgatcctagaggaaggagcacctgaaggaacggtggtgaccatactgattaag +agaaccaccggtgagctcatgccattggctgcccgaatgggcacccacgccaccatgaagatacaagggaaa +atgcttggaggtcaaatgggaatgctcctcacggggtccaacgccaagaatatggacctcggcaccattcct +ggagactgtggttgcccctatgtgtacaagagaggtaatgattgggtggtcataggagtgcacaccgcagct +gccagaggtggcaacactgtgatctgcgccacccaggggccagatggtgaggccacactcgagggaggagac +aatcacgggacctactgtggtgcaccaatacttggaccaggaaatgcaccaaagctcagcaccaaaaccaag +ttttggaggtcatccaacgccccactcccacctggtacttatgagcctgcttacctaggaggaaaggaccca +agggtaaaagggggtccgtcattacaacaggttatgagggatcaactcaaacccttcaccgccccccgaggg +aaaccaccgcgaccagcgattttagaggcagccaaagagaccatctgcaatgtgcttgagcaagtcattgaa +ccaccccaaaaatggtcttatgctcaggcctgtgcttcattggataagacaacatctagtggtcacccccac +cacatgaaaaagaatgacaattggaacggagagtctttcactggtgtattggctgatcaggcctctaaggcc +aatctcatgtttgaacagggaaaacacatgcaacccgtgtacactgctgctctcaaagatgagctcgtcaag +actagtaagatctatgaaaacattaagaaaagacttctatggggatcagatctgggcacaatgatccgttgt +gctagggcattcggtggcctcatggatgagatggaggcaaattgtgtgaatttactaattagagttggcatg +aacatgaatgaagatggacccatcatatttgagaagcattcaaaatacaaataccattatgatgctgactat +t-ccaggtgggactcaacccaacagaggcacatccttgggtctgcccttgaaataatgg-ttagattttcag +ctgaacctgaatt-agcacaaatagtgtctgaagatctcctagcccccagtgtggtggacgttggcgacttc +aaaatcaccataaatgaaggattgccctctggagtgccgtgtacatcacagtggaactcaatttcccactgg +ctcataacactgtgtgccatatcagaagtttcaggactgtcgccagacgtagtgcaaacaaactcctgcttc +tccttctacggggatgatgagatagtcagcaccgacatcaagttagatcccatgaagctgaccaacaagttg +aaagagtatgggttgattccaacaaggccagacaagacagaggggccgctcataattaaagagagtcttgag +ggcctaactttcctgaggagggacgtgtgtcgagacccagctggttggtatgggaaacttgaccaatcctca +atcatgagacaactgtattggactaagggaaccaaccatgatgatcccaatgagacaatgattccacactct +cagagacccatacaattgatgtcactgctaggggaggcagcactgcatggcccaactttctacaagaaagtc +agcaaattggtcatcactgagctcaaagaaggtgggatggatttctatgtaccaagacaggaacctatgttc +agatggatgagattctcggatctcagtacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctag---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggcgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtgttacttaatctggaactaggcccagaaataaatccttacctggcccacctttctagaatgtacaa +tggctatgcaggtgggtttgaagtgcaggtggtcctagctggaaatgcattcacagc---aggaaaggtaat +ctttgcagccataccccccaattttcctattgataatctgagtgcagcacagatcacaatgtgcccgcatgt +gattgtggatgttaggcagttagaaccaatcaacctcccaatgcctgatgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttgatcgcaatgttgtatacacctcttagagcaaataattc +tggtgatgatgttttcactgtgtcttgtagagttttaaccaggcctagtcctgatttctctttcaactttct +tgtaccacctactgtggaatcaaagacaaagcctttcacccttcctattctgaccatctcggagatgtccaa +ttctagg---tttccagtgccaattgattctctacacaccagcccaaccgacaatgttattgtccaatgtca +aaacgggcgcgtcactctcgatggcgagctgatgggtaccactcaactattaccaagccaaatatgtgcttt +caggg-----------------------------------------gcacgctcacaa-ca----------- +-----------tcaacaaatag--------------------------------------------gg---- +----acagggaccaacctgatgcagcag----cccccaggatattcgaccatcgt----------------- +----------tggcatattcaattggataacctgaatggcaccccttatgatcctgcagaggacataccagc +tcccttgggtacgccagattttcagggtaaggtctttggtgtggctagccaga---ggaaccccga---tgg +c--------------------------acaaca--------aga-----------gcacatgaggcaaaagt +ggacacaacatctggccgctttactccaaagttgggttccctagaaataatca---------ctgaatctgg +tgattttaa---tcc---aaatatgccaacaa---------------------------aattcaccccag- +--------ttggtgttggagttgacactgatg------------aagaattccaacaatgggtattgcctag +atattctggccag-gtcacc------cacaacatgaatctggccccagctgttgcccccaacttccctggtg +agcagcttcttttcttccgctcacagctaccat------cttctggtgggac------gtcca--------- +--gcgggactttggactgcttggtcccccaggagtgggttcagcatttctaccaggaatcagcccctgccca +gacacaggtggccctggtcagatatgtcaaccctgacactggtagggtgttgtttgaggccaaacttcataa +attgggttttataaccatagcaaagaatggtgactctccaataactgtccccccaaatgggtattttagatt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggcaacgggcgcaga---------ag +gattc---------aataatggcaggagcatttgtggcaggattggctggtgacatactcacaaacactgtg +ggatctttggtgagtgcagg---ggctaatgctattaatcagaaggttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaaaaggctgcaggctgatatgattgctatcaaacaaggggtcttgaccgctagc +ggcttttcccctgctgatgcagcccgtggggcaatcaatgctccagtgacaaaagtcctggactggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggctttacaagc------------ +ca-----------agttgtgcacaggaccacaccaaat---------------------------------t +tcaagat----------------gagccagactcccaagccccca--------------------------- +-------------------------------------------------ccc---------------agcag +cgggtctt-----------cagtg------------agatcaaactcaacacagctcactagc--------- +----------ctgagc-------tcacactc------atccgggtcatctcgatccagtgggtccatggtta +tcagctcac------tac--------------------------------cat------------------c +ttccag---------------------------------------caggaccagagattgggttaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttaggacagcttttgtcactccaccatctagcac +agtttct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaagattatctt---- +--tg-a-att-tgat------------------------------------ttagatt------agatttga +t------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>OP691294.1/1-7538 |Norovirus GII isolate Hu/US/2022/GII.10[P16]/CA-RGDS-1159 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttgaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccgccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +agatatgagg----------ttaa---gagtgggatttctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgggcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcttgtacgtggagaaaggcttagt +attaggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaatggagaggcatt +cccttataccgcctttgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccacaatggatgactccaaaattaagaaggtagcgaatatattcctatgttcgctgtccacattattcac +cagacctataaaagatctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccctactcggggactacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcctgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggtatgagtaacccaattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgactatgt +caactttgaagcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaatggcaacaccccgcatgggaaaggagtgatgaagactctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaattcgaactccaaggtc +ccacggtcaccaccttcaatttcgaccggaacagaattacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +ttcaccatcttaaacatgctcgaatcaggtactatgtcaaatgcgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccactcgcattgcgcgccgtatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gac-------gacg---agttcatcatatcttcaaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagaaagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaataggagtgttgatt +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgaactttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtgatccccgcaggcatgacagaagcattt +ggagtccccatcaaacaaatacagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcatctgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcgaccatgaaaattcaaggccgc +atggtaggcggacaaatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgaaggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaagttgagtaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcaacaggtaatgagagaccagttgaagccattcactgagcccaggggc +aagcctccaagaccaaatgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaagtggacatacgcacaagcgtgtgcctcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaaaaagagactgctctggggttctgacttgtccaccatgatccggtgc +gctaggtcgtttggtggactcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagacggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcactgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaggacttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagttggaccagagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaagaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggttatggctcttgaacctgtagctggggcgtctttagctgcccctgtgacaggtcaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagtttactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaattgggtcctgaattaaacccttatctggcacatttatctaggatgtataa +tggctatgctggaggcatggaagttcagattatgctagctgggaacgcgttcactgc---tggcaaactgat +ctttgctgctgtgcctccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaaccttagaacctgtgttactccctatgcctgacatcaggaactccttctttcactt +catccagagggatgag---ccaaaaatgagattggtggcaatgttatacacaccattgaggtccaatggttc +tggagatgatgtattcacagtttcatgtagggttctgacccgtcctacccctgattttgattttacttactt +ggtaccaccaactgttgaatcaaagagtaaaccctttactttgcccatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatatgttgtacaccaatccaaatgaaagtgcagttgttcagtgcca +aaatggtaggtgcaccctggacggtgagctgcagggaacaacccaactcctgcccacaggcatttgcgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggcac------------ +------acactggaacatgacagtgaccagcttgaatgggactccatttgacccaactgaggacatccctgc +cccactaggcactccggacttctccggtcaaatttatggggtaataagtcaga---gaaataccaacacagt +tcccgca-----gaaggaaaccttccggccaac--------cgg-----------gctcatgaagctgtgat +tgcaacctacagccccaaattcacacccaaattgggcaacattcaattcagta---------cttgggaaac +ccgagatgt---ggacactggacaacctacca---------------------------aattcaccccagt +tggc----ttggcctctgt-----ggatgctaactcccat---------tttgatcaatggactctccccag +ctactctggtgct-ttaact------ttaaatatgaatttggccccatctgttgccccagtctttcctggag +agtgccttctgttctttaggtctttcatccca------ctgaaggggggcta------tggga--------- +--accccgctattgattgcctgctgccacaggagtgggtccagcacctctatcaggagtcagcaccgtctct +tagcgatgtggctttggtgaggtacgtgaacccagagactggacgcaccctctttgaagccaagttgcatag +gaatggattcctgactgttgctaggaacagcactggacctgtcgtggcccccacaaatggatattttagatt +tgattcctgggtcaaccagttttacactttagcccccatgggaaatggcagtgggcgtagg---------ag +aatgc---------agtaatggctggagcttttgtagcaggtttggccggtgacgttcttagtaacggaatc +gggtcacttatcaatgctgg---tgccaatgcaatcaatcaaagagctgaattcgattttaataggcagtta +caacaaa---------------------------------attcttttaatcatgacaaagagatgctccag +gcccaagtccaagcaacaaagcagctgcaagcagacatgatcgccatcaagcagggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagttaacgctcctatgacacaggctttggactggagtggc +acgagatattgggctccaggtgccatgaaaacatccagctattcaggcaggtttatatcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcaa----------------cgcaagaatgctgcc---------------------------------- +-------------------------------ccccccactggctcttcttat------------------gg +tgggtctt-----------ctaga------------tctacagtctctactactcttg-------------- +----gttcttctgtat-----cttctagttc------tagagcttcaccc----ctaactca--------at +ctagtttga---------------tttctaactcttcttt-----------at------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagaccacttttgtcactccaccatcaagcaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcaca--------agtttag--t-----------gaaaagatta-------- +---a-t-t-------------------------------------------tt-------------c-tttt +a-a----------attt---ctctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP691295.1/1-7538 |Norovirus GII isolate Hu/US/2022/GII.10[P16]/CA-RGDS-1160 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttgaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccgccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +agatatgagg----------ttaa---gagtgggatttctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgggcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcttgtacgtggagaaaggcttagt +attaggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaatggagaggcatt +cccttataccgcctttgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccacaatggatgactccaaaattaagaaggtagcgaatatattcctatgttcgctgtccacattattcac +cagacctataaaagatctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccctactcggggactacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcctgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggtatgagtaacccaattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgactatgt +caactttgaagcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaatggcaacaccccgcatgggaaaggagtgatgaagactctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaattcgaactccaaggtc +ccacggtcaccaccttcaatttcgaccggaacagaattacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +ttcaccatcttaaacatgctcgaatcaggtactatgtcaaatgcgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccactcgcattgcgcgccgtatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gac-------gacg---agttcatcatatcttcaaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagaaagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaataggagtgttgatt +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgaactttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtgatccccgcaggcatgacagaagcattt +ggagtccccatcaaacaaatacagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcatctgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcgaccatgaaaattcaaggccgc +atggtaggcggacaaatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgaaggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaagttgagtaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcaacaggtaatgagagaccagttgaagccattcactgagcccaggggc +aagcctccaagaccaaatgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaagtggacatacgcacaagcgtgtgcctcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaaaaagagactgctctggggttctgacttgtccaccatgatccggtgc +gctaggtcgtttggtggactcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagacggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcactgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaggacttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagttggaccagagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaagaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggttatggctcttgaacctgtagctggggcgtctttagctgcccctgtgacaggtcaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagtttactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaattgggtcctgaattaaacccttatctggcacatttatctaggatgtataa +tggctatgctggaggcatggaagttcagattatgctagctgggaacgcgttcactgc---tggcaaactgat +ctttgctgctgtgcctccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaaccttagaacctgtgttactccctatgcctgacatcaggaactccttctttcactt +catccagagggatgag---ccaaaaatgagattggtggcaatgttatacacaccattgaggtccaatggttc +tggagatgatgtattcacagtttcatgtagggttctgacccgtcctacccctgattttgattttacttactt +ggtaccaccaactgttgaatcaaagagtaaaccctttactttgcccatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatatgttgtacaccaatccaaatgaaagtgcagttgttcagtgcca +aaatggtaggtgcaccctggacggtgagctgcagggaacaacccaactcctgcccacaggcatttgcgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggcac------------ +------acactggaacatgacagtgaccagcttgaatgggactccatttgacccaactgaggacatccctgc +cccactaggcactccggacttctccggtcaaatttatggggtaataagtcaga---gaaataccaacacagt +tcccgca-----gaaggaaaccttccggccaac--------cgg-----------gctcatgaagctgtgat +tgcaacctacagccccaaattcacacccaaattgggcaacattcaattcagta---------cttgggaaac +ccgagatgt---ggacactggacaacctacca---------------------------aattcaccccagt +tggc----ttggcctctgt-----ggatgctaactcccat---------tttgatcaatggactctccccag +ctactctggtgct-ttaact------ttaaatatgaatttggccccatctgttgccccagtctttcctggag +agtgccttctgttctttaggtctttcatccca------ctgaaggggggcta------tggga--------- +--accccgctattgattgcctgctgccacaggagtgggtccagcacctctatcaggagtcagcaccgtctct +tagcgatgtggctttggtgaggtacgtgaacccagagactggacgcaccctctttgaagccaagttgcatag +gaatggattcctgactgttgctaggaacagcactggacctgtcgtggcccccacaaatggatattttagatt +tgattcctgggtcaaccagttttacactttagcccccatgggaaatggcagtgggcgtagg---------ag +aatgc---------agtaatggctggagcttttgtagcaggtttggccggtgacgttcttagtaacggaatc +gggtcacttatcaatgctgg---tgccaatgcaatcaatcaaagagctgaattcgattttaataggcagtta +caacaaa---------------------------------attcttttaatcatgacaaagagatgctccag +gcccaagtccaagcaacaaagcagctgcaagcagacatgatcgccatcaagcagggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagttaacgctcctatgacacaggctttggactggagtggc +acgagatattgggctccaggtgccatgaaaacatccagctattcaggcaggtttatatcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcaa----------------cgcaagaatgctgcc---------------------------------- +-------------------------------ccccccactggctcttcttat------------------gg +tgggtctt-----------ctaga------------tctacagtctctactactcttg-------------- +----gttcttctgtat-----cttctagttc------tagagcttcaccc----ctaactca--------at +ctagtttga---------------tttctaactcttcttt-----------at------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagaccacttttgtcactccaccatcaagcaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcaca--------agtttag--t-----------gaaaagatta-------- +---a-t-t-------------------------------------------tt-------------c-tttt +a-a----------attt---ctctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OP609644.1/1-7543 |Norovirus GII isolate Hu/US/2021/GII.10[P16]/Genesee0003 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +agatatgagg----------ttaa---gagtgggatttctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttaggtgtgcacaaaccacctgcagccataagtatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaagctctcaggaggctcaatggagaggcatt +cccttataccgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccacaatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +caggcccataaaagatctcataggaaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacgctcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggctag +ggaggtggcaacaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaacccaatcca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaagcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacgatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaatgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactacgtcaaatgtgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacattaaggaggaaggaaagaagggtaaaaaca +aaactggtcgtggcaagaaacacaccgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagaaagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagaaagggccacattagggctagtgacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgaaaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcatgacagaagcattt +ggagtctccattaaacaaatacagatccacaaatcaggagagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaggaaggtgcgcctgagggcaccgtggcatctgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtaggcggacagatgggtatgttgctcactggatcgaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgaaggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcaacaggtgatgagagaccagttgaggccatttactgagcccaggggc +aagcctccaagaccaaatgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgttcacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtggactcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagacggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgttgtagatgtaggtgacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattctacggtgatgacgagattgtcagcactgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagctca +attttgaggcagatgtactggaccagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggttatggctcttgaacctgtagctggggcgtctttagctgcccctgtgacgggtcaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagtttactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaactgggtcctgaattaaatccttatctggcacatttatccaggatgtacaa +tggctatgctggaggcatggaagttcagattatgctagctgggaacgcgttcactgc---tggcaaactgat +ctttgctgctgtgcctccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaaccttagaacctgtgttactccctatgcctgacatcaggaactccttctttcactt +catccagagggatgag---ccaaaaatgaggttggtggcaatgctatacacaccactaaggtccaatggttc +tggagatgatgtattcacagtttcatgtagggttctgacccgtcctacccctgattttgattttacttactt +ggtaccaccaactgttgaatcaaagagcaaaccctttactttgcctatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatatgttgtacaccaacccaaatgaaagtgcagttgttcagtgcca +aaatggtaggtgcaccctggacggtgagctgcagggaacaacccaacttttgcccacaggcatctgcgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggcac------------ +------acactggaacatgacagtgaccaacttgaatgggactccgtttgatccaactgaggacatccctgc +cccactaggcacaccggacttctccggtcaaatttatggggtaataagtcaga---gaaacaccaacacagt +tcccgca-----gaaggaaatcttccggccaac--------cgg-----------gctcatgaagctgtgat +tgcaacctacagtcccaaattcacacccaaattgggcaacatccaatttagta---------cttgggaaac +ccaagatgt---gagcactggacaacctacca---------------------------agttcaccccagt +tggc----ttggcctctgt-----ggatgctaactcccat---------tttgatcaatggactctccccag +ctactctggtgct-ttaact------ttaaatatgaatttggccccatctgtcgccccagtctttcctgggg +agtgtcttctattctttaggtcttttatccca------ctgaaggggggcta------tggga--------- +--accccgccattgattgcctgttgccacaagagtgggtccagcatctctatcaggagtcagcaccatctct +tagcgatgtggctttggtgaggtatgtgaacccagagactggacgcaccctcttcgaagccaagttgcacag +gaatggattcctgactgttgctaggaacagtactggacctgtcgtggcccccacaaatggatattttagatt +tgattcctgggtcaaccagttttatactttagcccccatgggaaatggcagtgggcgtaga---------ag +aatgc---------agtaatggctggagcttttgtagcaggtttggccggtgacgttcttagcaacggaatc +gggtcactcatcaatgctgg---tgccaatgcaattaatcaaagagctgaatttgattttaacaggcagtta +caacaaa---------------------------------attcttttaatcatgacaaagagatgctccag +gcccaagttcaagcaacaaagcagctgcaagcagacatgatcgccatcaagcagggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagttaacgctcctatgacacaggctttggactggagtggc +acgagatattgggctccaggtgccatgaaaacatccagctattcaggcaggtttatatcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcag----------------cgtaagaatgctgcc---------------------------------- +-------------------------------ccctccactggctcttcttat------------------gg +tgggtctt-----------ctaga------------tctacagtctctactactctca-------------- +----gttcttctgtat-----cttctagttc------tagagcttcaccc----ctaaccca--------at +ctagtttgg---------------tttctaattcttcttc-----------at------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagactacctttgtcactcctccatcaagcaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcaca--------agtttag--t-----------gaaaagattg-------- +---a-t-t-------------------------------------------tt-------------c-tttt +a-a----------attt---ctcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>OP609645.1/1-7543 |Norovirus GII isolate Hu/US/2021/GII.10[P16]/Genesee0004 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +agatatgagg----------ttaa---gagtgggatttctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttaggtgtgcacaaaccacctgcagccataagtatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaagctctcaggaggctcaatggagaggcatt +cccttataccgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccacaatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +caggcccataaaagatctcataggaaaaattaaaccattaaacatactgaacatcctggcaacgtgtgattg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacgctcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggctag +ggaggtggcaacaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaacccaatcca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaagcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacgatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaatgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactacgtcaaatgtgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacattaaggaggaaggaaagaagggtaaaaaca +aaactggtcgtggcaagaaacacaccgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagaaagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagaaagggccacattagggctagtgacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgaaaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcatgacagaagcattt +ggagtctccattaaacaaatacagatccacaaatcaggagagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaggaaggtgcgcctgagggcaccgtggcatctgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtaggcggacagatgggtatgttgctcactggatcgaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgaaggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcaacaggtgatgagagaccagttgaggccatttactgagcccaggggc +aagcctccaagaccaaatgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgttcacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtggactcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagacggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgttgtagatgtaggtgacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattctacggtgatgacgagattgtcagcactgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagctca +attttgaggcagatgtactggaccagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggttatggctcttgaacctgtagctggggcgtctttagctgcccctgtgacgggtcaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagtttactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaactgggtcctgaattaaatccttatctggcacatttatccaggatgtacaa +tggctatgctggaggcatggaagttcagattatgctagctgggaacgcgttcactgc---tggcaaactgat +ctttgctgctgtgcctccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaaccttagaacctgtgttactccctatgcctgacatcaggaactccttctttcactt +catccagagggatgag---ccaaaaatgaggttggtggcaatgctatacacaccactaaggtccaatggttc +tggagatgatgtattcacagtttcatgtagggttctgacccgtcctacccctgattttgattttacttactt +ggtaccaccaactgttgaatcaaagagcaaaccctttactttgcctatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatatgttgtacaccaacccaaatgaaagtgcagttgttcagtgcca +aaatggtaggtgcaccctggacggtgagctgcagggaacaacccaacttttgcccacaggcatctgcgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggcac------------ +------acactggaacatgacagtgaccaacttgaatgggactccgtttgatccaactgaggacatccctgc +cccactaggcacaccggacttctccggtcaaatttatggggtaataagtcaga---gaaacaccaacacagt +tcccgca-----gaaggaaatcttccggccaac--------cgg-----------gctcatgaagctgtgat +tgcaacctacagtcccaaattcacacccaaattgggcaacatccaatttagta---------cttgggaaac +ccaagatgt---gagcactggacaacctacca---------------------------agttcaccccagt +tggc----ttggcctctgt-----ggatgctaactcccat---------tttgatcaatggactctccccag +ctactctggtgct-ttaact------ttaaatatgaatttggccccatctgtcgccccagtctttcctgggg +agtgtcttctattctttaggtcttttatccca------ctgaaggggggcta------tggga--------- +--accccgccattgattgcctgttgccacaagagtgggtccagcatctctatcaggagtcagcaccatctct +tagcgatgtggctttggtgaggtatgtgaacccagagactggacgcaccctcttcgaagccaagttgcacag +gaatggattcctgactgttgctaggaacagtactggacctgtcgtggcccccacaaatggatattttagatt +tgattcctgggtcaaccagttttatactttagcccccatgggaaatggcagtgggcgtaga---------ag +aatgc---------agtaatggctggagcttttgtagcaggtttggccggtgacgttcttagcaacggaatc +gggtcactcatcaatgctgg---tgccaatgcaattaatcaaagagctgaatttgattttaacaggcagtta +caacaaa---------------------------------attcttttaatcatgacaaagagatgctccag +gcccaagttcaagcaacaaagcagctgcaagcagacatgatcgccatcaagcagggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagttaacgctcctatgacacaggctttggactggagtggc +acgagatattgggctccaggtgccatgaaaacatccagctattcaggcaggtttatatcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcag----------------cgtaagaatgctgcc---------------------------------- +-------------------------------ccctccactggctcttcttat------------------gg +tgggtctt-----------ctaga------------tctacagtctctactactctca-------------- +----gttcttctgtat-----cttctagttc------tagagcttcaccc----ctaaccca--------at +ctagtttgg---------------tttctaattcttcttc-----------at------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagactacctttgtcactcctccatcaagcaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcaca--------agtttag--t-----------gaaaagattg-------- +---a-t-t-------------------------------------------tt-------------c-tttt +a-a----------attt---ctcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>OP609646.1/1-7543 |Norovirus GII isolate Hu/US/2011/GII.10[P16]/Bangladesh5145 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttgtttacaaatat +gtcttctaccctaaagaaag----ccctcggggctcggcccaagcagccc-accccgagggacaacttacaa +aag---------------------cccccaagaccaccaacgcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacccaatggcgaggaagaagaagaaccagtcatt +aggtttgagg----------ttgg---cagtggaatctctggcctgcccgaactcacgactgttccccaacc +ggatgcgaccaacacggcattcagtgttccaccgctgagtttaagagaaagcagggaggccaaggaaccgct +gactggggcaatactagagatgtgggatggggagatataccactatggtttgtatgtggagaaaggcttggt +gttgggcgtacataaaccacctgcggctataagcatggcaaaagtggaaatgacgccgctgtcgctgtactg +gcgtgtggtatacactcccc---aatacctcatatcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataacaactgttatgccttttgctgctgggtgttggatcttaatgactcgtggct +cag---caggaggatggtgcagagaacaacaggcttcttcagaccataccaagagtggaacagaaagcccct +acccactatggatgactccaaaatcaagaaggtggcaaacatattcttgtgctcattgtccacactgttcac +caggcctataaaagatattataggaaagattaaaccactgaacatcttgaacatcctggcaacgtgtgactg +gacgttcgccggaattgtggagtctctaatattgcttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggcgaatacgagttacaagggccagaagacatcgccgtcga +actcgtacccgtggtaatgggagggattggtctggtgttagggttcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatctcggtgcctatggtttagagatactcaaactggt +catgaaatggttcttcccaaagaaagaggaagccagtgaactagctatggtgagagcaatagaggatgctgt +gctggaccttgaggcgatagaaaacaatcacatgacagctctactgaaagacaaagatagccttgcaaccta +catgaaaacactggatctagaggaagaaaaggctagaagattgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctattggctcgaatagcggcggctagatcgctagttcacagggccaaggaggagct +atctagcagacttaggccagttgttgtcatgatatcaggtaagccagggataggtaagactcacctagctag +ggaggtggcgaaaaaggtagcatccactctcacgggagatcagagagtcgggctcataccaagaaacggtgt +ggaccactgggatgcatataaaggtgagagggttgtgttgtgggacgactacggcatgagcaaccccattca +tgatgctctacgcatacaagaactggccgacacatgtcccctcaccttgaattgtgatagaattgaaaacaa +aggaaaagtttttgatagtgaggttataataatcacaacaaacctcgccaacccagctcctcttgattatgt +caactttgaggcctg-ctctaggaggattgatttcttggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgagacttccctggtcaaccagatatgtggaaggacgctttcaaggcggacttctcacatatcaagttgc +aacttgcgcctcagggtggttttgacaagaatggcaacaccccacatggaaagggagttatgaagaccctca +ccaccggttctctgattgcacgcgcatcaggtttactgcatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacaggatcaccgcctttagacaattggctgcagaaaacaaat +atgggttagtggacaccatgagagttggtaatcaactgaaaggggtgaaaactatggaagaactcaagcaag +caattaggaacgtgtccatcaagaggtgccaaattatctataatggctccacgtatgaccttgagtctgatg +gcaagggtaaagttttggtggaaaaggtcaaaaacacttcagttcaaaccaacaacgaactggctggagctc +tgcaccacctcagaagtgcccgaatcaggtattacgtcaaatgtgtgcaagaagcagtctattccatcctac +aaattgccggtgctgcgttcgtcaccactcgtatcgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagtga--------gccagaggctaaagaagaggcccctaagctagaa-- +-gat-------gatg---aatttgtcatatcctccaaagacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacaccgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaggaaagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaagccacggaagaagacttttgtgaggaggaagaaatcaaaatccgccaaa +ggatctttcgccccaccagaaaacagaggaaggaagaaagggccacgctggggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaagccaaaagggaaattgtgggccgatgacaatagaagtgttgact +acaatgaaaaactggactttgaggccccaccaagcatatggtctagaattgtgagttttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggggtccctatcaaacaagtccaagtccacaaatcaggtgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtgacagggatgatcctggaagaaggtgcaccagagggcaccgtagcaacagtgctcatcaaa +cgccccaccggagaactcatgcccctcgcagctaggatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggcatgttgctcactggttcaaatgctaagggtatggacctgggaacaactcct +ggtgactgtggttgcccgtacatctacaaaaggggcaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaagcaactctcgagggtggagac +gacaaaggaacatactgcggggcacccatcttgggccctggaggagcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcaaacacgccccttccaccagggacatatgagcccgcctaccttggtggccgtgaccca +cgtgtaaagggtgggccctcactgcagcaagtcatgagagatcagttgaaacccttcactgaacccaggggc +aagcccccaagacctagtgtgctggaggcagctaaacaaaccatcatcaacgtcctcgagcaaactttagac +cccccacaaaaatggacgtacgcacaagcgtgcgcttcactcgacaagaccacctctagtgggcaccctcat +cacgcccgaaagaatgaattctggaacggtgagacatttgttggcaagttggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacatatgacaccagtgtacacagcagccctcaaggacgaactggtcaag +actgacaaagtttacggaaagatcaagaagagactactctggggctctgacttgtccaccatggtccggtgc +gctagggcctttggtggactcatggatgagatgaaggctcactgcatatcactcccagtccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataagtaccattatgatgcagattac +t-cccgctgggattcaacacaacaaagggctgttttggcagcggccttagaaataatgg-taagattctctg +cagaaccacaact-ggcgcagacggtcgctgaagatctgctggctcccagcgtggtggatgtaggagacttc +aaaatttcaataaatgaggggctcccttctggtgtgccatgcacttcccagtggaactccatcacacactgg +ctgctgactctctgtgctttgtctgaagtcaccaatctgtcccctgacatcgtgcaggcaaattccatgttc +tcgttctacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagctaaccaccaaattg +agggaatatggtctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttggat +ggactcaccttcctccggagaacagtttctcgtgatccagctggttggtttggaaagttagatcagagctca +atactaaggcagatgtattggaccagagggccaaaccatgaagaccctaatgagaccatgataccccactct +caaaggcccatacagctcatggcactgcttggtgaggcttcccttcacggaccctccttttacagcaagatt +agcaaattggtcataactgaactcaaagaaggtggaatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggttatggctcttgaacctgtagctggggcgtctttagctgcccctgtgacaggccaaacaaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagagttcactgtttccccaagaaattcccccgg +agaagtactcctaaatttggaactgggtcctgaattaaacccttatctggcacatttatctaggatgtataa +tggctatgctggaggcatggaggttcagatcatgctagctgggaacgcgttcactgc---tggcaaattgat +ctttgctgctgtgcccccacattttcccgttgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttagaactttagaacctgtgttacttcctatgcccgacatcaggaattctttctttcactt +catccagagggatgag---ccaaaaatgagattggtggcaatgttatacacaccactgaggtccaatggttc +tggggacgatgtattcacagtctcatgcagggttctgacccgtcccactcctgattttgattttacttactt +ggtaccaccaactgtcgaatcaaagagtaaaccttttactttgcctatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatattttgtacactaacccaaatgaaagtgcagttgttcagtgcca +aaatggtaggtgcaccctggacggtgaactgcagggaacaactcagctcctgcccacaggcatctgtgcatt +taggg-----------------------------------------gcaaggtcactcaac----------- +-----------aggtgca------------------------------------------------gg---- +-------a---tg----------------------------------atcacaggggcac------------ +------acactggaacatgacagtgaccaacttaaatgggactccgtttgacccaactgaggacatccctgc +cccactaggcactccggatttctccggtcaaatttatggggtaataagtcaga---gaaacaccaacacagt +tcccgca-----gaaggaaatctcccggccaac--------agg-----------gctcatgaagctgtgat +tgcaacctacagtcccaaattcacacccaaattgggtaacatccaatttagta---------cttgggaacc +ccaagatgt---gagcactggacagcccacca---------------------------agttcaccccagt +tggc----ttggcctctgt-----ggatgccaactcccat---------tttgatcaatggactctccccag +ctattctggtgct-ttaact------ttaaacatgaatttggccccatctgtcgccccagtcttccctggag +agtgtcttctgttctttaggtctttcatccca------ctgaaggggggcta------tggga--------- +--accccgctattgactgcttgttgccacaagagtgggtccagcatctctatcaggagtcagcaccatctct +tagcgatgtggctttggtgaggtatgtgaacccagaaactgggcgcaccctctttgaagccaagttgcacag +gaatggattcctgactgttgctaggaacagcgctggacctgtcgtggcccccacaaatggatatttcagatt +tgattcctgggtcaaccagttttacactttagcccccatgggaaatggcagtgggcgtaga---------ag +aatgc---------agtaatggctggagcttttgtagcaggtctgaccggtgacgttcttagcaacggaatc +gggtcactcattaatgctgg---tgccaatgcgattaaccaaaaagctgagtttgatttcaataggcagctg +caacaaa---------------------------------attcttttaatcatgataaagagatgctccag +gcccaagttcaagcaacaaagcagctgcaggcagacatgatcgccattaagcagggggtgttggccgctggc +ggcttctcccccactgatgcagcaagaggggcagtcaacgctcccatgacacaggctttggactggagtggc +acgagatactgggctccaggtgccatgagaacatccagttattcaggcaggtttgtgtcgacc--------- +ac---------------------tccatctaggcaagttgagt----------------------------t +tcctcag----------------cgtaagaatgctgca---------------------------------- +-------------------------------tcctccactggttcttcttat------------------gg +tgggtctt-----------ctagg------------tctacagtttctaccactcttg-------------- +----gttcttctatat-----cttctagttc------tagagcttcaccc----ctaactca--------at +ctagtttgg---------------tttctaattcttcttc-----------ag------------------c +aagatc---------------------------------------aagaactagtgactgggtgcgtgagca +aaaccggagcctagaaccctttatgc---atggggctttgcagactacttatgtcactcctccatcaagtaa +agcttct---agca------------------------------atggga---cggtctcgaccgttccaaa +aggtgttttgga-ctcttggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcacg--------agtttag--t-----------gaaaagatta-------- +---a-t-t-------------------------------------------tt-------------c-cttt +a-a----------attt---ttcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC726059.1/1-7505 |Norovirus GII.6 Hu/GII.6[P7]/178F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +---------------------cgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacactgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacattgcccctcagttaagatcgggaccaagacattaacagttcc +tcc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagttggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctaccgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggtacacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatcactttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +gag---caggagaagcatttctaggaccaccggcttcttcaaaccacaccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcaggtatagtagaaacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagattggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggataaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgagaaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcaggtagacctggcattggcaaaacccacatggcgag +acacttggccaagagtgtcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtgactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcattataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggtcaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactgt +ctctagccccacaaggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatataactttgataccaacagagtctctgcatttaggaagttggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacggcgcttaagagcgtcaagaccttggaagatctgaaagctg +cactgagggatgtgaagttcaatgagtgtgagataatttacaaaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagaa------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagat-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaattagagaagaaaggaacgggaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcggacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaaccttctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatacttgtgaag +agacccacaggtgagatgatccccctagcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctccttacgggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttacgagcctgcctacttgggaggtagggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcgtccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttattcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagtactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaagatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccccattctgactcttggagagctgtctaa +ctccaga---ttccccgctccgatagacatgttgtacactgatcccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccagatttgctcctt +caggg-----------------------------------------gcacactaattagtcag--------- +----------acgtcgaggtcc------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttaggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtacacat +agacaccacaaaccctagatacaccccaaaacttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaacttggcccctgcagtcgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctgggggcta------tggat--------- +--caggccacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +atctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactgggcaggggcgcaga---------ag +aattc---------aataatggcaggagttttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaattaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaacagtatgaagacaaccagttattcggg-ccagttctccagcaaccccgtgca +ta-----------ggcagcccactctgtcc---cgttctgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggttttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacagcatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------ttt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726073.1/1-7440 |Norovirus GII.4 Hu/GII.4[P31]/975F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----gtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------ccctggagaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggtacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactttctttgttttg +gagacctgtatacacccccc---agtaccttatctctccagatactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccaccatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctagaggcaattgaaaacaaccacatgaccaccctgctcaaagacagagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacgatcaactctcttctggcaagaatcgctgctgcacgctctttagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaaaacacagaaga--------gatggccaacaaagatggttgcctaaaacctaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgacgaggagtatgatgaataca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggatttctgtgaggaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctgtcaagcaaatccaggtacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggggcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagagcccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaacgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaatgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgttacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtattggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcggagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcgt +atttgcagcagtcccaccaaatttcccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccgcttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgtcgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagtaactatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctaacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggtaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttgcaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggattacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726074.1/1-7501 |Norovirus GII.4 Hu/GII.4[P31]/1143F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------tccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaacaccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtacctcgtctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caaccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcagagtgctactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccgcaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttggtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagagga +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtgtatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaagactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcagatgtactggaccaggggccccaaccacgaagacccatttgaaacaatgataccacactcc +caaagaccaatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggtactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgat---------------------------------g +ctaggaa----------------ga---------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgcaactt-------------------- +----------ctgtgt-----attcaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726075.1/1-7500 |Norovirus GII.4 Hu/GII.4[P31]/1145F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------gccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaacaccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtacctcgtctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caaccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcagagtgctactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccgcaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttggtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagagga +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtgtatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaagactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcagatgtactggaccaggggccccaaccacgaagacccatttgaaacaatgataccacactcc +caaagaccaatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggtactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgat---------------------------------g +ctaggaa----------------ga---------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgcaactt-------------------- +----------ctgtgt-----attcaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726076.1/1-7509 |Norovirus GII.4 Hu/GII.4[P31]/1238F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaacaccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtacctcgtctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcatgacttctcacacataaaactga +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caaccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcagagtgctactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccgcaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttttgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttggtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagagga +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtgtatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaagactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcagatgtactggaccaggggccccaaccacgaagacccatttgaaacaatgataccacactcc +caaagaccaatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggtactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgat---------------------------------g +ccaggaa----------------ga---------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgcaactt-------------------- +----------ctgtgt-----atacaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----t--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726077.1/1-7530 |Norovirus GII.4 Hu/GII.4[P31]/1219F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +----------------------------c-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacctaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagcgatcagcctcgccaaggtcgagttggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgagacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcgtccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgttctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagcgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacaaggcggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggct +cagccctcaccactttcaactttgaccgcaacaagatacttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagacaatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactaaccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtataccatcatcc +aaatcactggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacatacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccaaggtgtaaaagagtttttc +ggagtccctgtcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +agaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctctcctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagatctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacagttgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgatacccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactatcaagctgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgaatcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcacc----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgactcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactgcaacatacaatgcaggtcgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgcccccgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------g-------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC726078.1/1-7197 |Norovirus GII.4 Hu/GII.4[P31]/1243F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------cagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagcaatcagcctcgccaaggtcgagttggcaccgctctctttgttctg +gagacctgtatacgcccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgagacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcgtccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcgattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggtacaattaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgttctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagcgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacaaggcggttttgacaaaaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgagtatgaattgcaaggtt +cagccctcaccactttcaactttgaccgcaacaagatacttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagacaatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactaaccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacatacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactctatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccagggtgtaaaagagtttttc +ggagtccctgtcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattctcaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggctacactcgaaggaggtgat +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +agaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctctcctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacagttgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgatacccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactatcaagctgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcacc----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +gtcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgactcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactgcaacatacaatgcaggtcgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgcccccgctcggggttcctct------------------ag +taagtctt-----------ctagt------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726079.1/1-7346 |Norovirus GII.2 Hu/GII.2[P16]/36F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------ccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggcagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agctcgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccatgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggcgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctactaactctttgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggtctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagctccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagctgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccatttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggccatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggag---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726080.1/1-7439 |Norovirus GII.2 Hu/GII.2[P16]/166F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------------------------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcctaagcagcct-gccccgagagacaaaccacaa +aat---------------------cccccaaggccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcaaggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---agtacctcatcccccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatgatacaaaggacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +caggcccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggatatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctggtaggataaggccagtagttgtcatgatatctggcaagccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcttacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggcttcgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatatgaccatcaagaggtgccagatcatctacggcggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagattaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaagttcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaaatgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttactgaacccaggggc +aaacctccgagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgtacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacggcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacgcaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctccg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgttactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtccaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatactt +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacgctggacggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaatttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccagacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------catagcctcatc-----------aa--------at +ttaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726082.1/1-7492 |Norovirus GII.2 Hu/GII.2[P16]/691F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------ctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ctc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccctacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggcagcaaatgtattcctatgttcattgtccacattgttcac +cagacccataaaagacctcattggaaaaattaaaccgttgaacatattgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtatgctgaagcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagtcggacttttcacacatcaagctac +agctcgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggacgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggctggggctc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagaataaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgctattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacgcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctacaaaaggggcaatgactatatagccattggggttcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacgtatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctacggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggcgggcttatggacgaaatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtggatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctactaactctttgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggtctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtggtatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagctccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagctgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgtttcctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgacgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggccatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacat---taatgtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggactc---------aacgacactgaacac---------ttcaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctgctaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaaacagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgtccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----aacacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggcgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacaaacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------g----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726083.1/1-7500 |Norovirus GII.2 Hu/GII.2[P16]/727F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +-----------------------tctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctaccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +tcc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatcccccctgaaaccctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggcagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaagtgtt +gtcctcagcagcatcaacactcagggcttgcagagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agctcgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcttttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggtccagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtcttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccgtcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggcgggcttatggacgagatgaagacacactgcatatcactcccagtccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacagtt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctactaactctttgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattgaaccctgaacagttaaccgccaaattg +aaggagtacggtctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagctccggtcaccggtcaaacaaatattgtaga +cccttggattagagcaaatttcgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactggatctagagctgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggccatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aataacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------ctcagtggggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcagctcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------t +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC726084.1/1-7364 |Norovirus GII.2 Hu/GII.2[P16]/788F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------gccccgagagacaaaccacaa +aag---------------------ccctcaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaagccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaagtgtt +gtcctcagcagcatcaacactcagggcttgcagagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgagttagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggagattgtccacaaaatctgcatcccctgatatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgacgctcttcgcttacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtatgctgatgcaccagaagtagaaaaggcaa +aacgggacttccctggtcaaccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgacctcgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcgactcatgtaatccccgcaggcataacagaagcattt +ggagtttccatcaaacaaatccagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcactgtggcaactgtgcttgtcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacccccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggtgggcttatggacgagatgaagacacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcgcaaatagtcgctgaggatctgctggcccctagtgtagtggatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctactaactctttgtgccttgtctgaagtcaccaaactgtcccctgatattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaacaacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggccatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcctgggtaaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgtc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaacttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726085.1/1-7499 |Norovirus GII.2 Hu/GII.2[P16]/1068F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------ctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaacacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacccaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacgtactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggtaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagatcgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccggctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +agacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacattgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtactcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC726086.1/1-7491 |Norovirus GII.2 Hu/GII.2[P16]/1088F/Tokyo/2022/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagataaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggcgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcactgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatggggggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcttatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgtatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctcttattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacgatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaataagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgatcatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcacgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgtatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagggtaagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccacggccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgataaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggactctgaacagttaaccgccaaactg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtctatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccaggggagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaacttgggcaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgcttttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactgccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccccgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcaatctt-----------caagg------------ccaactctggccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagat------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tatt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726087.1/1-7493 |Norovirus GII.2 Hu/GII.2[P16]/172F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +---------------------------------gctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aaa---------------------cctccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcgttcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggtgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +caggcccataaaagaccttataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggtaagccaggaataggcaaaactcatctggccag +agaggtggcaagaaaggtggcatctactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaggtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccagaagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggccagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---ggatcaaaatga--------atcagagactaagggagaggcccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcagaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggacttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcatactgcagca +gcccgtggtggaaatactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccaggaacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaactacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagttagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgatgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccagtgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctcccttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattgaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaacaacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacataatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcttactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggctgaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagttcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtatcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccgcaacca----------------- +----------ctggtt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agtacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcaaccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gaa------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC726088.1/1-7484 |Norovirus GII.2 Hu/GII.2[P16]/1001F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggaatctctgatattgtttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaccaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgagttctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctatggggctccgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatttgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgatgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcttgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagttagtggcatttgtgcttt +caaag-----------------------------------------gtgaagttaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggcatcatctcccaaa---gagataaatacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagcca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-g------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC726089.1/1-7516 |Norovirus GII.2 Hu/GII.2[P16]/710F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +ttcctccaccttaaagaaaa----ccctcggggctaggcccaaacagcct-gccccgagagacaaaacacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacccaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgacaccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacgtactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatccgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccagatcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagagaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcactaccttcaatttcgaccgaaacagaatcgcggcattcagacaattggctgcagaaaacaagt +atggattggtggataccataaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaact---agatcaaaatga--------aacagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttaggtacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggtacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcgcactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagatcgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattgtcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccggctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtctatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtacctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +agacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacattgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaggagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccagtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaact--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgttcctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>LC726090.1/1-7483 |Norovirus GII.2 Hu/GII.2[P16]/1022F/Tokyo/2021/Japan POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, partial and complete cds +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggtgactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggatgaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgccccctcaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggcttcgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaaat +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagtttcggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcatcgcacgccgtatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagcgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagtattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatc +agaacagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaag +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +ccgaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagatttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggagcccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaactttgtccaggcccccaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gatcatagatgttagaaccttggaacctgttttactaccactccctgatgttaggaataactttttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctatatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcactatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtacctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgatgctgtggt +ccctacttacactgcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttgggctc---------aatgacactgaacac---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccattgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------cgagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM884056.1/1-7526 |Norovirus GII isolate 43587 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctgtctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttacctgaacttaccactgtctgtcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggaaaacagggacgccaaggagccgct +gaccggaactatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +actcggtgtgcacaaaccaccagctgccatcagtctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggctttttcagaccttaccaagaatggaacaggaaacccct +ccccactatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaagagtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggtatagtggaatctttaatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtaactacgaactgcaggggcctgaggaccttgcagtaga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcgtccgctgcttccaccttaagagcttgtaaagacctcggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacgattaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgtcgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgtaatggcgt +tgaccactgggacgcatataagggagaaagagtcgtcctatgggacgattatgggatgagcaatcccatcca +cgatgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagcgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgatatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caacccccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaggt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacaag +cactcaagaatgtcgcaatcaagagttgccagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacaccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgtgccaggatcaggtattatgtcaaatgtgttcaggaggccctgtattccattatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgtcgtctcatccgatgatatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcgttttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagatgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ctagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaatccagatacacaaatcaggtgaattttgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtagtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgattacgtggtcattggggtccatacagctgcc +gcccgcggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaagacccc +agagttaagggtggcccttcattgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgttaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacctctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaactggcagaccaggcttccaaggcc +aatctgatgtttgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaagtttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcatttgggggtctaatggaggaactcaaagcacattgtgtcacactacctgttagggtaggtatg +aatatgaatgaggatggccctatcatttttgagagacactccagatacaaatatcattatgatgctgactac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaattatgg-tcaagttttccc +cagagccacacct-agcccaaaaagttgcagaggaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactttctgaggtaacaaacctgtcccctgacattattcaggctaattctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaagccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctaaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atacttagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaaggcaagagccgatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctccttaatttggaattgggcccagaaataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaacattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactaggt----------- +-----------caacaagcagg------gctagcgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgatagtacaact--------aga-----------gcacatgaagcaaaggt +ggatacaacagctggtcgcttcaccccaaaactaggttcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagacttccagcaatggtccttacctga +ttactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attgggtttcatgactatagctaagaatggtgactctccaataactgtccctccaaatggatattttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgtg +gggtctctagttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacaaattgaggcgacaaagagattacaggctgatatgattgccatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagcgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacaggacgatgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaaacac--tagcctgagctcacactcgtccggattgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcactac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaacttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtgc +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attgaatttga-ttt- +--------------gga------------------------------------------------------- +------------------------------------------------------------------------ +- +>OK376714.1/1-7534 |Norovirus GII isolate 0407 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------cttctgctgccgctgttgct------------aacagc +a------ac----gacgacaccacaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacccttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacggccgcccactccagaactagtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtc +tcttatagtg----------tcaa---agatggcgtctccggtttgcctgagctatccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaaccagagggagaacagggatgctaaggaaccact +gactgggacgattcttgaaatgtgggatggagaaatctaccattacggcctgtacgttgagcgaggtattgt +actgggtgtgcacaaaccaccagctgccatcagcctcgcaaaggtcgagttaacaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcattgctccagacactctcaaaaagttacacggagagacatt +cccctacacagccttcgacaacaactgctacgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaagataaagaaggtagctaacatattcctgtgtgccctgtcttcgctgttcac +caggcccataaaagacataataggaaagttaagacctctcaacatcatcaacatcctggcttcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgacttcgagctacaaggacctgaagaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgcaaagaccttggtgcatatgggctggagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaagcgaacgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacaccctggcaaccta +catgaggaccctcgacctcgaggaagaaaaggccagaaagctctcaaccaagtctgcctcgcctgacatcgt +gggcacaatcaacgcgctcctggcgcggattgctgctgcacgctccctggtacaccgagcgaaggaggaact +ttccagcagaccaagacccgtagtcttaatgatatcgggcaagccaggaatagggaagacccaccttgctag +ggaggtggctaagagaatcgcagcctccctcacaggagatcagcgcgttggtctaatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgatgcccttaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgacgtcatcataatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgtatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +aacgcgacttcccgggtcaacctgacatgtggaaaagcgcttttagttctgacttctcacacataaaattgg +cactggccccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccaccggctccctcattgcccgggcaacagggctactccatgagagattagatgagtttgaactgcagggcc +cagccaccaccaccttcaacttcgaccgtaacaaggtgctcgccttcaggcagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaagaccatgccagaactcaaacaag +cactcaagaatatatcaatcaagaagtgccaaattgtgtatggtggctgcacctacgcacttgagtctgatg +gcaagggcaacgtgaaagttgacagggttcagaacgcctccgtacagaccaacaatgagttgtctggcgccc +tgcatcacctcaagtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtactctatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagatctgtggt +ccaggccacaggtggaagacacagagga--------gactgctagcaaggacgggtgcccgaaacccaag-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaggaaagaaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggaggtggccattgccagagcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttcactcggtttagtcacaggttctgaaa +tcaggaaaaggaatccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaagactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttc +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgagatttccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacaatactcatcaaa +aggcctactggagaactcatgcccctagcagccagaatgggaacacacgcaaccatgaggattcaaggacgc +actgtcgggggacagatgggcatgcttctgacaggttccaacgccaaaagcatggatttaggcaccacacca +ggcgactgcggttgcccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggggaagctacacttgaaggtggagac +agcaagggaacatactgtggtgcgccaattctaggtccagggagtgccccaaaactcagcactaaaaccaaa +ttctggaggtcatccacagcaccacttccacctggcacctacgagccagcctaccttggtggcaaagacccc +agggtcaagggtgggccctcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aaaccaccaaacccaggtgtattagaggctgccaagaagaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtccctcgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtacgaacaagggaagaacatgaccccagtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatgacaagattaagaagaggctcctctggggctcggatttggcaaccatgatccgttgc +gctcgagcattcggaggtctgatggacgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcattccaagtatagataccactatgatgctgattac +t-ctcggtgggactcaacacaacaaagggccgtgctggcaactgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagctgaagaccttctttctcctagtgtagtggatgtaggtgacttc +acaatatcaatcaacgagggtcttccctcgggagtgccctgcacctcccagtggaattccatcgcccactgg +cttctcactctctgtgcactttccgaagtcacaaacttgtctccagacgtcatacaggctaattctcttttc +tccttctatggtgatgatgaaattgtcagtacagacataaaattggacccagaaaagttgacaacaaagctt +aaggaatatggattgaaaccaacccgtcctgacaaaactgaagggcctcttgtcatttctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggaccaaagttca +atactcaggcaaatgtactggactaggggccctaaccatgaagacccatctgaatcaatgatcccacactct +cagagacccatacaactgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatt +agcaaattggtcatcgcagaactcaaagaaggtggtatggatttttacgtgcccaggcaagaaccaatgttc +aggtggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccaggtgtcaacaatga +ggtcatggctctggagcccgttgccggtgccgccatcgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtccaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagtgcgcccctaggccctgatttgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgagggtttaaatcccagccaggtcactatgttcccccacgt +gataacagatgtcagacaactggaacctgtattgatccccttacctgatgttaggaacaacttctatcatta +taaccagtcaaatgat---tccacccttaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgggttctcacgaggccatcccctgactttgatttcatatttct +ggtgccaccaacagtcgagtcaaaaactaagccattcactatcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggccccagcagtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacttt +caggg-----------------------------------------gggatgtcgcccaca----------- +-----------tcccggg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatctggcctctctaaattggagcaattatgacccaacagaagaaattccagc +ccctctgggaaccccagatttcgtgggaaagatccaaggtgtactcactcaaa------------------- +-----cc-----acaaggagtgatggctcaacc--------cgg-----------ggccacaaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaacttgcta---------ctgacacaga +aaatgattt---tgaagcccgccaaaatgcaa---------------------------aattcactccaa- +--------tcggtgtcatccaggatggcaacaccacccaccggaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgcc------cacaatgtacacctagcccctgctgtagcccccagttttccgggtg +agcaacttcttttcttcagatccacactgcccg------gatgcagcgggta------cccca--------- +--atctggacctggactgcctactcccccaggagtgggtgcagcacttctaccaacaagcagccccagcaca +atctgatgtggctttactaagatttgtgaacccagacacgagtagggtcttgtttgagtgcaaactccataa +agcaggctacctcacagtgtctcacactggtcaacatgatttggttatccctcccaatggctactttaggtt +tgattcctgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgtagg---------cg +tgctt---------tgtaatggctggagccgtctttgcaggaatggcatctgatgtcctcggctccggactt +agttccctaatcaatgctgg---ggctggggctatcaaccagaagattgactttgagaacaataaacaattg +cagcaagcctcctttcagtttagcaataatctacaacaaacttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcggcccgtggggcaatcaacgcccctatgacaaaggttttggattggaacggg +acaaggtactgggcccctgatgccagggtcacaacatacaactcaggccgcttctccactccc--------- +ca---------------------gccttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagaactcc------------------------------ +------------------------------cacccccgctcggggttcccct------------------ag +cacatctt-----------ctaat------------gcttctactgtgactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatctgtcacctttcatga---ggggggcccacaacatatcgtatgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acatccgtacgcgaggggagtcacg--------ggtataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>ON706286.1/1-7539 |Norovirus GII isolate G22-035 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcctaagggcact-------------aaagcaccc +aacagtga----------------ccagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaggac------actgta +cagtttgatg----------caaagtcggaaactgtcactgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccatacacggctttcagcaacaattgctacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccgaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaggataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacttagggaactatgcccttgacatacttaaattagt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcaggccagtggttgtcatgatctcaggcaaacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +ggggaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtctctgcattcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaggtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggatcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgtcgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtatctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagctttctccaacaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggtttagtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacccacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgcaactcaagggcaagatggggaggcagtccttgaaggaaacgaa +aaccttggcacttactgtggtgccccaattttgggccctggtaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctgcctcctggtacatatgaacctgcttacctggggggtagggatccc +agagtggaaaaagggccctccctacagcaagttatgagagaccagctgaaacccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtacaggtatcactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagtattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacagtggaattcgatagcgcactgg +attctgactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagctacccagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgaaatgcttctaaatcttgaattgggccctgaacttaacccttacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagtttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacccatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttataccgatcccaatgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ttaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggagtgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagttccccctaatggttattttagatt +tgaggcttgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttcccttatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggatgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcatactgctcc---------------------------a +tcaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgctgtctg-------cagg--------aa +ctgggtt----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgcaggcgaggggagtcaca--------aatctag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-cttttt--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>ON706287.1/1-7528 |Norovirus GII isolate G22-036 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcctaagggcact-------------aaagcaccc +aacagtga----------------ccagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaggac------actgta +cagtttgatg----------caaagtcggaaactgtcactgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccatacacggctttcagcaacaattgctacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccgaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaggataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacttagggaactatgcccttgacatacttaaattagt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcagaccagtggttgtcatgatctcaggcaaacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +ggggaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtctctgcattcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaggtatcgagtctcttccaacg +acaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggatcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgtcgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtatctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagctttctccaacaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggtttagtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacccacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgcaactcaagggcaagatggggaggcagtccttgaaggaaacgaa +aaccttggcacttactgtggtgccccaattttgggccctggtaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctgcctcctggtacatatgaacctgcttacctggggggtagggatccc +agagtggaaaaagggccctccctacagcaagttatgagagaccagctgaaacccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtacaggtatcactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagtattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacagtggaattcgatagcgcactgg +attctgactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagctacccagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgaaatgcttctaaatcttgaattgggccctgaacttaacccttacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagtttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacccatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttataccgatcccaatgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ttaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggagtgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagttccccctaatggttattttagatt +tgaggcttgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttcccttatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggatgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcatactgctcc---------------------------a +tcaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgctgtctg-------cagg--------aa +ctgggtt----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgcaggcgaggggagtcaca--------aatctag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-c-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>ON706288.1/1-7495 |Norovirus GII isolate G22-037 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------ggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcctaagggcact-------------aaagcaccc +aacagtga----------------ccagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaggac------actgta +cagtttgatg----------caaagtcggaaactgtcactgggctaccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccatacacggctttcagcaacaattgctacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccgaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaggataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacttagggaactatgcccttgacatacttaaattagt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcaggccagtggttgtcatgatctcaggcaaacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +ggggaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtctctgcattcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaggtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggatcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgtcgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtatctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagctttctccaacaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggtttagtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacccacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgcaactcaagggcaagatggggaggcagtccttgaaggaaacgaa +aaccttggcacttactgtggtgccccaattttgggccctggtaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctgcctcctggtacatatgaacctgcttacctggggggtagggatccc +agagtggaaaaagggccctccctacagcaagttatgagagaccagctgaaacccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtacaggtatcactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagtattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacagtggaattcgatagcgcactgg +attctgactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagctacccagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgaaatgcttctaaatcttgaattgggccctgaacttaacccttacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagtttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacccatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttataccgatcccaatgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ttaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggagtgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagttccccctaatggttattttagatt +tgaggcttgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttcccttatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggatgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcatactgctcc---------------------------a +tcaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgctgtctg-------cagg--------aa +ctgggtt----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgcaggcgaggggagtcaca--------aatctag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>ON706289.1/1-7427 |Norovirus GII isolate G22-038 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------------------------------------------gagcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggataccggatttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccaatgagccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggtttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaagccaatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctagcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcaccatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacactatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgactatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ttctagaaggattgatttcttggtctatgcagagtcaccagaaatcgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaaggattgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggagacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaggtcg +ccttgagagatgtaaagtttaatgagtgtgaaataatttacaggagctctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggtaaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagcccaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatattccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggggtacttggcttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaattcacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggcgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccttccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaactcgttaag +actgataagatctacaagaaaataaagaagagacttctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagctcttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcagaggagcgttctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcgcaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccctctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacatttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaagacacc---ccccggatgaggcttgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgccatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggcagatgtacccttgacggcacgctgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgattagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatttaacag--- +--attccccccag--------agagcccgta----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaagggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggcgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atccgctgttgcactggttaggtatgtcaaccccgacaccgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------agagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---gtggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacgcataggcagcctctcttcgccc +acttccgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>ON569431.1/1-7556 |Norovirus GII isolate human, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------tatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---aggtggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggtgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +actcggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggctttttcagaccttaccaagaatggaacaggaaacccct +ccccatcatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcactattcac +taggcccatcaaagacataataggaaaagtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtaga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcgtccgctgcttccaccttaagagcttgtaaagacctcggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacgatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgatgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgacgtaaaagttgacagagttcagaacaccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcgttttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggtgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccaggatgggaacccacgcaaccatgaagaaacaagggcgc +actgttggaggtcaaatgggcatgctcctgacaggatccaacgccaagagtatggatctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgctacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccccatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttggaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactttctgaggttacaaacctgtcccctgacatcattcaggctaattctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctaaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atacttggacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccgatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaggggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcgtttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagcgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactaggt----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggtaaagtctttggcgtggccagtcaaa---gaaa------------ +-----cc------------ctgatagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaatcagacttccagcaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggcgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgatatgattgccatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagcgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacaggaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctaagctcacactcgtccggatcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcactac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +acctccgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---accttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>ON329737.1/1-7581 |Norovirus GII isolate human, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aggaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgcacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +attagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgagtttgaactccaaggcc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagatcaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactagggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgatggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctaggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggccatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagaggccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaagagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatgtcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +ttgggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccaatcctttggaaaagttgtttacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaagctgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggtcaacatgatttggtcatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctaggactacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------ccttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------t +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcctacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-agat-----ta-----tctt--tctttcc-----------tt-------------ttctt- +-------------tagt---gtctttaaaaaaaa-------------aaaaaaaaaa--------------- +------------------------------------------------------------------------ +- +>OM980238.1/1-7561 |Norovirus GII isolate Hu/ES/2019/GII.4[P31]/3915VLC nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------gat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gcgtgctttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagccaccaccc +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agaaggcgtttctggattgcctgagctcaccactgtcatccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccaat +aactggaacaattattgaaatgtgggatggagaaatctaccattatggcctgtacgtggaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagactacatggagagacatt +cccctacaccgcatttgacaacaactgctacgccttctgctgttgggtgttagatctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcttgtgcaccttgtcttcactatttac +cagacccattaaggatataataggaaaattaaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcccaggcatagtagaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaagacagcttggcgaccta +tatgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaagtctgcgtcacctgatattgt +gggcacaatcaacgctcttctggctcgaatcgccgctgcacgctccctagtgcaccgggcgaaagaggagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggagaccagggataggaaaaacccaccttgccag +ggagttggccaaaaagatcgcagcctccctcacaggggatcagcgtgtaggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattacgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaagtagagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgcttttagttccgacttctcacacataaaactgg +cactggccccacagggtggttttgataagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctctcttatcgctcgagcgtcagggctgctccatgagaggctagatgaatatgagctacaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagacctcaaacaag +cactcaagaatgtcgcgatcaagagatgccagatagtgtacaatggtaacacctacacactcgaggccgacg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcaaaccaacaatgagctagccggcgccc +tacaccatctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacatagaaga--------gacggccagtaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgttgtttcatccgacgacgtcaaaatcgagggtaagaaggggaagaaca +agtccggccgtggcaaaaagcacacagccttctcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagggaagaaaggaacggtaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaggaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagaaagggcctctctaggcttggtcacgggctcagaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccgccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccgattgagattcccaagaccaatc +agaactgatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggggagcttatgcctttggcagccaggatgggaacccatgcgaccatgaagattcaggggcgc +acagttggaggacagatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacacca +ggcgattgcggttgtccctatatctacaaaagagggaatgactatgtggtcataggagtccatacagcagct +gcccgtggaggtaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagtgctccgaaactcagcaccaagactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaaattatgagggaccaactaaagccattcacagaacccagagga +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +catatgcggaaaaacgattgctggaatggggagtccttcacgggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccggtctacactggtgcacttaaagatgaactggtgaag +actgataaaatttatggcaaaatcaagaagaggctcctgtggggctcagacctagcgactatgatacggtgc +gcccgggcttttggaggccttatggatgaactcaaggcgcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaagatggccccataatctttgaaaagcactccagatataggtatcattatgatgctgattac +t-ccagatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccgcactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +cagatatcaataagtgaaggactcccctccggggtgccttgcacctcccaatggaattccattgcccactgg +ctcctcaccctttgtgcactctctgaagtcacagacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagcacagacataaagttggacccagaaaagctgacagcaaaactc +aaggagtacggattaaagccaacccgtcccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacgttccttcggaggactgtgacccgcgacccagctggctggtttggaaagttggaacaaagctca +atccttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaaggcccatacaattgatgtccttgctaggtgaggctgcgctccacggcccggcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggtatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagtgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtaccaccaaactttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +agtagtagatgttaggcagcttgaacctgtgttgattcctttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---cctactattaagctgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtctcttgtcgggtcctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaattgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------acttcaga----------------- +----------------atgaatttggcctctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagattttgtagggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgt-----------ggccataaagctacagt +gtacactgggagcgccgactttgctccaaaactaggcacagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggacggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aatact------cataatgtgcacctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacagggagggttttgtttgaatgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgt---------tataatggctggagctttctttgctggattggcttctgatgtcctcggctccgggctt +ggttcccttatcaatgctgg---cgctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcatccttccaatttagtagtaatttacaacaggcttcctttcaacatgataaagaaatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +ggattctctgagacagatgcggcccgtggggcaatcaacgcccctatgacaaaaactctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccatcggtggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tattctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcaccttttatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtagacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tttc-tt--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>OM980239.1/1-7565 |Norovirus GII isolate Hu/ES/2019/GII.4[P31]/3973VLC nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gcgtgctttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagccaccaccc +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agaaggcgtttctggattgcctgagctcaccactgtcatccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccaat +aactggaacaattattgaaatgtgggatggagaaatctaccattatggcctgtacgtggaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagactacatggagagacatt +cccctacaccgcatttgacaacaactgctacgccttctgctgttgggtgttagatctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcttgtgcaccttgtcttcactatttac +cagacccattaaggatataataggaaaattaaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcccaggcatagtagaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaagacagcttggcgaccta +tatgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaagtctgcgtcacctgatattgt +gggcacaatcaacgctcttctggctcgaatcgccgctgcacgctccctagtgcaccgggcgaaagaggagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggagaccagggataggaaaaacccaccttgccag +ggagttggccaaaaagatcgcagcctccctcacaggggatcagcgtgtaggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattacgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaagtagagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgcttttagttccgacttctcacacataaaactgg +cactggccccacagggtggttttgataagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctctcttatcgctcgagcgtcagggctgctccatgagaggctagatgaatatgagctacaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagacctcaaacaag +cactcaagaatgtcgcgatcaagagatgccagatagtgtacaatggtaacacctacacactcgaggccgacg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcaaaccaacaatgagctagccggcgccc +tacaccatctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacatagaaga--------gacggccagtaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgttgtttcatccgacgacgtcaaaatcgagggtaagaaggggaagaaca +agtccggccgtggcaaaaagcacacagccttctcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagggaagaaaggaacggtaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaggaggacttttgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagaaagggcctctctaggcttggtcacgggctcagaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccgccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggtgcgaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccgattgagattcccaagaccaatc +agaactgatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggggagcttatgcctttggcagccaggatgggaacccatgcgaccatgaagattcaggggcgc +acagttggaggacagatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacacca +ggcgattgcggttgtccctatatctacaaaagagggaatgactatgtggtcataggagtccatacagcagct +gcccgtggaggtaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagtgctccgaaactcagcaccaagactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaaattatgagggaccaactaaagccattcacagaacccagagga +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +catatgcggaaaaacgattgctggaatggggagtccttcacgggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccggtctacactggtgcacttaaagatgaactggtgaag +actgataaaatttatggcaaaatcaagaagaggctcctgtggggctcagacctagcgactatgatacggtgc +gcccgggcttttggaggccttatggatgaactcaaggcgcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaagatggccccataatctttgaaaagcactccagatataggtatcattatgatgctgattac +t-ccagatgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccgcactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +cagatatcaataagtgaaggactcccctccggggtgccttgcacctcccaatggaattccattgcccactgg +ctcctcaccctttgtgcactctctgaagtcacagacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagcacagacataaagttggacccagaaaagctgacagcaaaactc +aaggagtacggattaaagccaacccgtcccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacgttccttcggaggactgtgacccgcgacccagctggctggtttggaaagttggaacaaagctca +atccttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaaggcccatacaattgatgtccttgctaggtgaggctgcgctccacggcccggcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggtatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagtgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtaccaccaaactttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +agtagtagatgttaggcagcttgaacctgtgttgattcctttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---cctactattaagctgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtctcttgtcgggtcctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaattgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------acttcaga----------------- +----------------atgaatttggcctctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagattttgtagggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgt-----------ggccataaagctacagt +gtacactgggagcgccgactttgctccaaaactaggcacagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggacggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aatact------cataatgtgcacctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gttgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacagggagggttttgtttgaatgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgt---------tataatggctggagctttctttgctggattggcttctgatgtcctcggctccgggctt +ggttcccttatcaatgctgg---cgctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaactg +caacaagcatccttccaatttagtagtaatttacaacaggcttcctttcaacatgataaagaaatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +ggattctctgagacagatgcggcccgtggggcaatcaacgcccctatgacaaaaactctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccatcggtggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tattctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcaccttttatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtagacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-tttc-tt--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>OM980240.1/1-7536 |Norovirus GII isolate Hu/ES/2019/GII.4[P4NewOrleans]/4008ALC nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttctgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggagaaaccacaa +aga---------------------ccccctcgaccacctacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acctatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgttcctccacttaatcagagggagaatagagatgctaaggaaccact +cactggaacaatactggagatgtgggacggggaaatctatcactatggcctgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgctatcagcctcgctaaggtagagttagcaccactctccttgtactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +tatgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgatatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcatataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgcccccttactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagccccactggactacgt +caactttgaagcatg-ctcgaggcgcattgacttccttgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagctctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttgttgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaattttgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaataaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatagccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacatagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgacgaataca +agaggatcagggaagaaaggaatggcaagtactctatagaagagtacctccaggacagggataaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggcttagtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaaattgtgggctgacgacgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaagccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccacgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggggtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcatccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccggtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatctatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatggtccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcgcactgcgtcacacttcccattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgttggcagcagctctagagatcatgg-taaaattctccc +cagaaccacattt-ggctcaagtagtcgctgaagacctcctttctcctagtgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacctgtctcctgatactatacaggctaattctctcttc +tctttttatggtgatgatgaaattgtcagcacagacataaaactggacccagagaaattgacagcaaagctc +aaagaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccatcattttacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaagtcat +ctttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttaattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaacaatgc +tggggacgatgtcttcacagtctcttgccgagtcctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgtcgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaggaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgttcatctggctcctgctgtggcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +gtctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaggaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgcccctgctcggggtccctct------------------ag +taaacctt-----------ctaat------------tcttctactactactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgctagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------agtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699526.1/1-7523 |Norovirus GII.4 Hu/GII.4[P31]/1851/Tokyo/2019/Japan genomic RNA, nearly complete genome +-------------------------taac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacattgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagttatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccttagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacatagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaggaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtggcgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcagatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatctacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgttacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaagttggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699527.1/1-7534 |Norovirus GII.4 Hu/GII.4[P31]/2047/Tokyo/2019/Japan genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcagaccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccgccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcgataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactttctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699528.1/1-7505 |Norovirus GII.4 Hu/GII.4[P31]/2260/Tokyo/2020/Japan genomic RNA, nearly complete genome +---------------------------ac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccttagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgacgcccttaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacatagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaggaggaggaggccaaaatccggcaga +ggattttcagaccaacgaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtggcgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcttgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgttacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttttggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctggatcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcaagcttccctt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaacgt-----------gaaaagac-a-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699529.1/1-7497 |Norovirus GII.4 Hu/GII.4[P31]/2448/Tokyo/2020/Japan genomic RNA, nearly complete genome +------------------------------------tccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtctccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgattttctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agcaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgtttaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccgttcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----accaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctagggctacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699530.1/1-7513 |Norovirus GII.4 Hu/GII.4[P31]/2460/Tokyo/2020/Japan genomic RNA, nearly complete genome +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcagaccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaataatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccgccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcgataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactttctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699531.1/1-7503 |Norovirus GII.4 Hu/GII.4[P31]/2497/Tokyo/2020/Japan genomic RNA, nearly complete genome +----------------------------c-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaaggtccc +tcc-----------------------------tcccacacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacgacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtagagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccttagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacactaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacatagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaggaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtggcgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgtggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgttacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagccaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699532.1/1-7544 |Norovirus GII.4 Hu/GII.4[P31]/2597/Tokyo/2020/Japan genomic RNA, nearly complete genome +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatagcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agcaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatagcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggcg---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC699533.1/1-7505 |Norovirus GII.4 Hu/GII.4[P31]/58/Tokyo/2021/Japan genomic RNA, nearly complete genome +------------agat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttttcggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagctaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gacctttgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacaggattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacgcttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaattcagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagccggctggtttgggaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agcaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcagtcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699534.1/1-7511 |Norovirus GII.4 Hu/GII.4[P31]/136/Tokyo/2021/Japan genomic RNA, nearly complete genome +---------------------agtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttatctagcat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagcttaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctcccttacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgcacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccctcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaagccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacgggtgcacttaaagatgagttggtaaag +accgataaagtttatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaacctcacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagccggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agcaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggcccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacata----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacccttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-g-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699535.1/1-7527 |Norovirus GII.4 Hu/GII.4[P31]/211/Tokyo/2021/Japan genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttttcggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctccctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +ataatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcacaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattagctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaaatcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agtaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---agggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgtcgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaaa---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacagcaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggtaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtagga---tgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------t-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699536.1/1-7527 |Norovirus GII.4 Hu/GII.4[P31]/408/Tokyo/2021/Japan genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgagttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttttcggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctccctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +ataatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaactatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcacaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaaatcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agtaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---agggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaaa---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacagcaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtagga---tgtcacctttcatga---ggggggcccacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------t-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699537.1/1-7534 |Norovirus GII.4 Hu/GII.4[P31]/414/Tokyo/2021/Japan genomic RNA, nearly complete genome +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttttcggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctccctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +ataatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaactatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcacaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaaatcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaagtt +agtaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcaggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---agggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaaa---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacagcaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtagga---tgtcacctttcatga---ggggggcccacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699538.1/1-7539 |Norovirus GII.4 Hu/GII.4[P31]/759/Tokyo/2021/Japan genomic RNA, nearly complete genome +---------------------cgtctaac-gacgctttcgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtctcat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gaggcctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatgttctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtaga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcgtccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagctcctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaggtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaggggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatttttagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttagtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgtggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccagaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtaaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggtctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccatctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcacttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagtccagtttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgcagtggcccccacttttccgggtg +agcagctccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgacgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagccaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caagtctt-----------ccaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgaacttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +atgttcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgtt-----tt-----t------ctttt----------c-t-----t--------t----- +-------a-------gt---gtctt----------------------------------------------- +------------------------------------------------------------------------ +- +>LC699539.1/1-7501 |Norovirus GII.4 Hu/GII.4[P31]/1143/Tokyo/2022/Japan genomic RNA, nearly complete genome +------------------------------------tccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaacaccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtacctcgtctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caaccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcagagtgctactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccgcaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttggtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagagga +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtgtatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaagactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcagatgtactggaccaggggccccaaccacgaagacccatttgaaacaatgataccacactcc +caaagaccaatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggtactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgat---------------------------------g +ctaggaa----------------ga---------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgcaactt-------------------- +----------ctgtgt-----attcaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699540.1/1-7500 |Norovirus GII.4 Hu/GII.4[P31]/1145/Tokyo/2022/Japan genomic RNA, nearly complete genome +------------------------------------------gccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaacaccaccc +agg---------------------cccccgcgaccacccacgccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtacctcgtctctccagacactcttaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatatcctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgcttggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggtaaaatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caaccctcgccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcagagtgctactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcacaacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccgcaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctcttggcttggtcacgggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagatttccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agcaaagggacatactgtggcgcgccaatcttaggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagagga +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtgtatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaagactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaggttca +attcttaggcagatgtactggaccaggggccccaaccacgaagacccatttgaaacaatgataccacactcc +caaagaccaatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gaggtgtcacacata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggtactccagactttgtggggaagatacaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggtccaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgat---------------------------------g +ctaggaa----------------ga---------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgcaactt-------------------- +----------ctgtgt-----attcaaatca------aacaatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC699541.1/1-7503 |Norovirus GII.4 Hu/GII.4[P31]/1185/Tokyo/2021/Japan genomic RNA, nearly complete genome +----------------------------c-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagcaatcagcctcgccaaggtcgagttggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaagttaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaagttggaaagatgct +gtcatccgctgcgtccactttaagagcttgtaaagatcttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagcgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggcggttttgacaaaaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggct +cagccctcaccactttcaactttgaccgcaacaagatacttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagcttaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaggggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacatacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccaaggtgcaaaagagtttttc +ggagtccctgtcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttctggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +agaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactac +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacagttgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagctgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttcttacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccgttcctctggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggagtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgactcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaaccttagggatgc------------------------------ +------------------------------tgcccccgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgc-----acccaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581004.1/1-7479 |Norovirus GII isolate Hu/NL/2017/GII.4[P4]/Rotterdam/17001 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaaaccaacacggcatttagtgtccctccactcaatcagagggagaacagagatgctaaagagccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagaaattgtccggagaaacgtt +tccctacgtagcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagattggaacaggaaacccct +tcccaccatggatgactctaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +taggcccataaaagacataatagggaagttaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctgaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacgatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaagtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcattccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagagtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcaccctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcatcattatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataagactgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgcttcatgagaggctagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaataaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaatatttcaatcaagaaatgccaaatagtgtatggtggttgcacctacatgcttgagtctgatg +gtaagggcaatgtgaaagtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccatttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagcaaggacgggtgcccaaagcctaag-- +-gac----gaagagg---agttcgtcgtttcatccgacgacatcaaacccgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccatagccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +tcaggaagaggaacccagatgacttcaaacctaaggggaaattgtgggctgacgatgacaggggtgtggact +ataatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +gctgttggaggccagatgggcatgcttctgacggggtccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggagtgccccaacactcagcaccaagaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaagccaagtgtgctggaagctgccaagaagaccatcatcaatgttcttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacgtgcgcaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacagctgcgctcaaggatgagctggtcaag +actgacaaaatttatggcaaaatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagctcactgtgtcacacttcccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacatatcactatgatgctgactac +t-ctcgatgggactcaacacaacaaagggccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tctttctacggtgatgatgaaattgtcagcacagacataaaattggatccagagaaattgacagcaaagctc +agagagtatgggttgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccttacccgatgttaggaacaatttctaccatta +taaccaatcaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctctggaaaggctgttcacgggccccagcaatgcctttgttgttcaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccccctgggaactccagatttcgtggggaagatccaaggtatgctcacccaga------------------- +-----cc-----acaaggtcagatggctcgact--------cgt-----------gcccacagagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +aaatgattt---tgataccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccaccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggctcccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcatttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatctgacgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaataacagaaaattg +cagcaagattccttccaatttagtagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaattgatgaagctcaagcaagcaatgctcctagagggt +ggattctctgggacagacgcagctcgtggggcaatcaacgctcccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctccaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccccacccggggttcctcc------------------ag +catgtctt-----------ctaac------------tccccttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggagtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acatccgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581005.1/1-7479 |Norovirus GII isolate Hu/NL/2017/GII.4[P4]/Rotterdam/17002 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagaaaccaacacggcatttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagaaattgtccggagaaacgtt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagactggaacaggaaacccct +tcccaccatggatgactctaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +taggcccataaaagacataatagggaagttaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctgaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacgatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaagtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagagtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcaccctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcatcattatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaagctgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggctagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaacaaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaacatttcaatcaagaagtgccaaatagtgtatggtggttgcacctacatgcttgagtctgacg +gtaagggcaatgtgaaagtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggcgccc +tgcaccacttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctatggt +ccaagccacaggtggaaaacacagagga--------gatcaccagcgaggacgggtgcccaaagcctaag-- +-gac----gaagagg---agttcgtcgtctcatccgacgacatcaaacctgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaggaaaggaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggaggtggccatagccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggcgctgaaa +tcaggaagaggaacccagatgacttcaaacctaaggggaaattgtgggctgatgatgacaggggtgtggact +acaatgagaaactcagtttcgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +gctgttggaggccagatgggcatgcttctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggagtgccccaacactcagcaccaagaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaagccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacgtgcgcaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaaaatttatggcaaaatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagctcactgtgtcacacttcccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacatatcactatgatgctgactac +t-ctcgatgggactcaacacaacaaagggccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tctttctacggtgatgatgaaattgtcagcacagacataaaattggatccagagaaattgacagcaaagctc +agagagtatgggttgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccttacccgatgttaggaacaatttctaccatta +caaccaaacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgttcaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtggggaagatccaaggtatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ctgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccaacaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggctcccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatctgacgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaataacagaaaattg +cagcaagattccttccaatttagtagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaattgatgaagctcaagcaagcaatgctcctagagggt +ggattctctgggacagacgcagctcgtggggcaatcaacgctcccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccccacccggggttcctcc------------------ag +catgtctt-----------ctaac------------tccccttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acatccgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581006.1/1-7479 |Norovirus GII isolate Hu/NL/2017/GII.4[P4]/Rotterdam/17004 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagagaccaacacggcatttagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctaccactatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagaaattgtccggagaaacgtt +tccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +taggcccataaaggacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctaaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaaggcctgtggtgctgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaggtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagagtcgtcctatgggacgactatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcaccctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaagctgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaacaaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaacatttcaatcaagaagtgccaaatagtgtatggtggttgcacctacatgcttgagtctgacg +gtaagggcaatgtgaaagtcgacagggtccaaagcgccgccgtgcagaccaacaacgagctggccggcgccc +tgcaccacttgaggagcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctatggt +ccaagccacaggtggaaaacacagagga--------ggtcaccagcgaggacgggtgcccaaagcctaag-- +-gat----gaagagg---agttcgtcgtctcatccgacgacatcaaacctgagggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggatcagggaggaaaggaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacgaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggtgctgaaa +tcaggaaaaggaacccagatgacttcaaacctaagggaaaattgtgggctgatgatgacaggggtgtggact +acaatgagaaactcagtttcgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +gctgttggaggccagatgggcatgcttctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctacatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggagtgccccaacactcagcaccaagaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaagccaagtgtgctggaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggcaaaatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagctcactgtgtcacacttcccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacatatcactatgatgctgactac +t-ctcgatgggactcaacacaacaaagggccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tctttctacggtgatgatgaaattgtcagcacagacataaaattggatccagagaaattgacagcaaagctc +agagagtatgggttgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccttacccgatgttaggaacaatttctaccatta +caaccaatcaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgttcaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtggggaagatccaaggtatgctcacccaga------------------- +-----cc-----acaaggtcagatggctcgact--------cgt-----------gcccacagagccacagt +gtacactgggagcgccgacttttctccaaaactgggcagaatccaatttgcca---------ctgacacaga +aaatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccaccgcccgaaatgaaccccaacaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggctcccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatctgacgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaataacagaaaattg +cagcaagattccttccaatttagtagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaattgatgaagctcaagcaagcaatgctcctagagggt +ggattctctgggacagacgcagctcgtggggcaatcaacgctcccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccccacccggggttcctcc------------------ag +catgtctt-----------ctaac------------tccccttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acatccgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581007.1/1-7479 |Norovirus GII isolate Hu/NL/2017/GII.4[P4]/Rotterdam/17007 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaaaccaacacggcatttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctaccactatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagaaattgtccggagaaacgtt +tccctacgtagcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagactggaacaggaaacccct +tcccaccatggatgactctaaaataaagaaggtggccaacatattcatgtgtgccctgtcctcgctgttcac +taggcccataaaagacataatagggaagttaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatacggattagagatcctgaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggccatagtgaggtccatcgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacgatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaggtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagagtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcaccctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcatcattatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaaactgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcatcgcccgggcatcagggctgctccatgagaggctagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaataaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaatatttcaatcaagaaatgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcagtgtgaaagtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccacttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagcaaggacgggtgcccaaagcctaag-- +-gat----gaagagg---agttcgtcgtttcatccgacgacatcaaacccgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccatagccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggcgctgaaa +tcaggaagaggaacccagatgacttcaaacctaaggggaaattgtgggctgacgatgacaggggtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagagggcgcacctgagggtaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +gctgtcggaggccagatgggcatgcttctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggagtgccccaacactcagcaccaagaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaagccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacgtgcgcaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacagctgcgctcaaggatgagctggtcaag +actgacaagatttatggcaaaatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacatatcactatgatgctgactac +t-ctcgatgggactcaacacaacaaagggccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacatcatacaggccaactccctcttc +tctttctacggtgatgatgaaattgtcagcacagacataaaattggatccagagaaattgacagcaaagctc +agagagtatgggttgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccttacccgatgttaggaacaatttctaccatta +caaccaaacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctctggaaaggctgttcacgggccccagcaatgcctttgttgttcaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ctgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggctcccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatctgacgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaataacagaaaattg +cagcaagattccttccaatttagtagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaattgatgaagctcaagcaagcaatgctcctagagggt +ggattctctgggacagacgcagctcgtggggcaatcaacgctcccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccccacccggggttcctcc------------------ag +catgtctt-----------ctaac------------tccccttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acatccgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581008.1/1-7479 |Norovirus GII isolate Hu/NL/2018/GII.4[P4]/Rotterdam/17008 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacctttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccccaa +aga---------------------cccccacgaccgcctaccccagagctggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagagaccaacacggcatttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctatcactatggcctgtacgtggaacgaggtcttgt +actaggtgtacacaaaccaccagctgctatcagccttgctaagattgagctaacaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatctctccggacaccctcaagagattgtccggagaaacgtt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctgaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgcttttcac +caggcccataaaggacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctaaagctggt +tatgaaatggttcttcccgaagaaggaggaggcgaatgagctggctatagtgaggtccattgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaaggcctgtggtgttgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggagatggccaggaagatcgcagcctcccttacaggagaccaacgcgtgggcctcatcccacgcaatggtgt +cgaccattgggacgcgtacaagggagagagagtagtcctatgggacgactatggaatgagcaaccctattca +tgatgctctcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggattatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttccgacttcacacacataaagctga +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttagatgaatttgagctacaaggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaacaaat +atggactgatggacacaatgagggtcgggaaacaactcaaggatgtcaggaccatgccagagctcaaacaag +caatcaaaaacatttcaatcaagaaatgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcaatgtgaaggtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccatttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaagccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagcgaggacgggtgcccaaagcctaag-- +-gac----gaagagg---agttcgtcgtttcagccgacgacatcaaacccgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacggcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggagttggccatagccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +tcaggaagaggaacccagatgacttcaagcccaaggggaaattgtgggctgacgatgacaggggtgtggact +ataatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtctcactactcatcaag +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacgggatccaacgccaagagcatggacctgggcactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccaacactcagcaccaaaaccaaa +ttttggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaaaggtggcccttcactgcagcaagtcatgagagaacagctgaagccattcacagaaccaaggggc +aaaccaccaaagccaagtgtgctggaggccgccaagaagaccatcatcaatgtccttgagcaaacgattgac +ccacccgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggtaaaatcaagaagaggctgctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccagatacacataccactatgatgctgactac +t-cacggtgggactcaacacaacagagggccgtgttggaagcagctctagaaatcatgg-tcaaattctccc +cagagccacactt-ggctcaggtagtcgcagaagacctcctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtctcccctcgggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tccttctacggagatgatgaaattgtcagcacagacataaaattggatccagagaaattgacaacaaagctc +agagagtacggattgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccctacccgatgttaggaacaatttctaccatta +caaccagacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgtccaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------acttcaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaaccccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ccgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggcccccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatccgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaacaacagaaaattg +cagcaagattccttccaatttagcagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaactgatgaagctcaagcaagcaatgctcctagagggc +gggttctctgggacagacgcagctcgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccccacccggggttcctcc------------------ag +catgtctt-----------ctatc------------tcctcttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581009.1/1-7479 |Norovirus GII isolate Hu/NL/2018/GII.4[P4]/Rotterdam/17010 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacctttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccgcctaccccagagctggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagagaccaacacggcatttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctatcactatggcctgtacgtggaacgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagattgagctaacaccactctccttgtactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagagattgtccggagaaacgtt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgcttttcac +caggcccataaaggacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctaaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcgaatgagctggctatagtgaggtccattgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaaggcctgtggtgttgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggagatggccaggaagatcgcagcctcccttacaggagaccaacgcgtgggcctcatcccacgcaatggtgt +cgaccattgggacgcgtacaagggagagagagtagtcctatgggacgactatggaatgagcaaccctattca +tgatgccctcaggctgcaagaactcgctgacacctgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgacttctcacacataaagctgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttagatgaatttgagctacaaggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaacaaat +atggactgatggacacaatgagggtcgggaaacaactcaaggatgtcaggaccatgccagagctcaaacaag +caatcaaaaacatttcaatcaagaaatgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcaatgtgaaggtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccatttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagcgaggacgggtgcccaaagcctaag-- +-gac----gaagagg---agttcgtcgtttcatccgacgacatcaaacccgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacggcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggagttggccatagccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggcgctgaaa +tcaggaagaggaacccagatgacttcaaacctaaggggaaattgtgggctgacgatgacaggggtgtggact +ataatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtctcactactcatcaag +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacgggatccaacgccaagagcatggacctgggcactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccaacactcagcaccaaaaccaaa +ttttggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaaaggtggcccttcactgcagcaagtcatgagggaacagctgaagccattcacagaaccaaggggc +aaaccaccaaagccaagtgtgctggaggccgccaagaagaccatcatcaatgtccttgagcaaacgattgac +ccacccgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggtaaaatcaagaagaggctgctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccagatacacataccactatgatgctgactac +t-cacggtgggactcaacacaacagagggccgtgttggaagcagctctagaaatcatgg-tcaaattctccc +cagagccacactt-ggctcaggtagtcgcagaagacctcctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctcgggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tccttctacggagatgatgaaattgtcagcacagacataaaattggatccagagaaattgacaacaaagctc +agagagtacggattgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccctacccgatgttaggaacaatttctaccatta +caaccagacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgtccaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------acttcaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaaccccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ccgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggcccccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatccgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaacaacagaaaattg +cagcaagattccttccaatttagcagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaactgatgaagctcaagcaagcaatgctcctagagggc +gggttctctgggacagacgcagctcgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccctacccggggttcctcc------------------ag +catgtctt-----------ctatc------------tcctcttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581010.1/1-7479 |Norovirus GII isolate Hu/NL/2018/GII.4[P4]/Rotterdam/17012 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagagaccaacacggcatttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggagatctaccactatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagattgagctaacaccactctccttgtactg +gaggcctgtgtacactcctc---agtacctcatctctccggacaccctcaagagattgtccggagaaacgtt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +caggcccataaaggacataatagggaagttaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctaaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcgaatgagctggctatagtgaggtccattgaggacgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgtgcaaaggaggagct +ttccagcagaccaaggcctgtggtgctgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaggtggccaggaggatcgcagcctcccttacaggagaccaacgcgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagagtcgtcctatgggacgactatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgccttcagttccgacttctcacacataaaactgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggctagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaataaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaacatttcaatcaagaaatgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcaatgtgaaggtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccatttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagcaaggacgggtgcccaaagcctaag-- +-gac----gaagagg---agttcgtcgtttcatccgacgacatcaaacccgagggcaagaaggggaagaaca +agactggtcgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaagtac---t +atgaggagttggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacgaggaaacaacgcaaggaggagagagcctctctcggtctggtcacaggcgctgaaa +tcaggaaaaggaacccagatgacttcaaacctaagggaaaattgtgggctgatgatgacaggggtgtggact +acaatgagaaactcagcttcgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccaacactcagcaccaaaaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagctgaagccattcacagaaccaaggggc +aaaccaccaaagccaagtgtgctggaggctgccaagaagaccatcatcaatgtccttgagcaaacgattgac +ccacccgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggtaaaatcaagaagaggctgctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgactac +t-cacggtgggactcaacacaacagagggccgtgttggaagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagacctcctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tccttctacggagatgatgaaattgtcagcacagacataaaattggatccagagaaattgacaacaaagctc +agagagtacggattgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccctacccgatgttaggaacaatttctaccatta +caaccagacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgtccaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------acttcaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaaccccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ccgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggcccccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatccgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaacaacagaaaattg +cagcaagattccttccaatttagcagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaactgatgaagctcaagcaagcaatgctcctagagggc +gggttctctgggacagacgcagctcgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccctacccggggttcctcc------------------ag +catgtctt-----------ctatc------------tcctcttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581011.1/1-7479 |Norovirus GII isolate Hu/NL/2018/GII.4[P4]/Rotterdam/17014 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccctgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtttccggcttgcctgacctctccaccgtcaggcaacc +ggaagaaaccaacacggcatttagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +cactgggacaattctggaaatgtgggatggggagatctaccattatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacactctcaagagattgtccggagaaacatt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagactggaacaggaagcccct +tcccaccatggatgactctaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +caggcccataaaagacataatagggaagttaaagcctctcaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctgaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacgatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgcgcaaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaagccaggaataggtaagacccacctcgctag +ggaagtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcattccacgcaatggcgt +cgaccattgggacgcgtacaaaggggagagagtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcatcattatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataagactgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcatcgcccgggcatcagggctgcttcatgagaggctagatgagtttgaactacagggcc +cagccctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaataaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaacatttcaatcaagaagtgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcaatgtgaaggtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccacttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccttgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagtaaggacgggtgcccaatgcctaag-- +-gac----gaagagg---agttcgtcgtttcatccgacgacatcaaacctgagggcaagaaggggaagaaca +agactggccgcggcaagaaacacacagctttttcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagggaggaaaggaatggcaagtactccatagaagaatacctccaggacagggacaagtac---t +atgaggagttggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacgaggaaacaacgcaaggaggagagagcctctctcggtctggtcacaggcgctgaaa +tcaggaaaaggaacccagatgacttcaaacctaagggaaaattgtgggctgatgatgacaggggtgtggact +acaatgagaaactcagcttcgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gtttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccaacactcagcaccaaaaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagctgaagccattcacagaaccaaggggc +aaaccaccaaagccaagtgtgctggaggctgccaagaagaccatcatcaatgtccttgagcaaacgattgac +ccacccgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggtaaaatcaagaagaggctgctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgactac +t-cacggtgggactcaacacaacagagggccgtgttggaagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagacctcctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tccttctacggagatgatgaaattgtcagcacagacataaaattggatccagagaaattgacaacaaagctc +agagagtacggattgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccctacccgatgttaggaacaatttctaccatta +caaccagacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgtccaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------acttcaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaaccccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ccgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggcccccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatccgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaacaacagaaaattg +cagcaagattccttccaatttagcagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaactgatgaagctcaagcaagcaatgctcctagagggc +gggttctctgggacagacgcagctcgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccctacccggggttcctcc------------------ag +catgtctt-----------ctatc------------tcctcttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW581012.1/1-7479 |Norovirus GII isolate Hu/NL/2018/GII.4[P4]/Rotterdam/17016 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctttcaccgccgctgttgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccctgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatggtggtt +tcttacagtg----------tcaa---agatggtgtttccggcttgcctgacctctccaccgtcaggcaacc +ggaagaaaccaacacggcatttagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +cactgggacaattctggaaatgtgggatggggagatctaccattatggcctgtacgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaagatagagctaacaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacactctcaagagattgtccggagaaacatt +cccctacgtggcctttgacaacaactgttacaccttctgttgctgggtcctggatctaaatgattcgtggct +gag---caggagaatgattcagagaacaactggcttcttcaggccctaccaagactggaacaggaagcccct +tcccaccatggatgactctaaaataaagaaggtggccaacatattcatgtgtgctctgtcctcgctgttcac +caggcccataaaagacataatagggaagttaaagcctctcaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatcagcagcgtccaccttgagagcttgcaaagaccttggtgcatatggactagagatcctgaagctggt +tatgaaatggttcttcccgaaaaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacactatggcaaccta +catgagggtgcttgacctcgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacgatcaacgctctcctggcgagaattgctgccgcacgttctctggtgcatcgcgcaaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaagccaggaataggtaagacccacctcgctag +ggaagtggccaagaggatcgcagcctcccttacaggagaccagcgcgtgggcctcattccacgcaatggcgt +cgaccattgggacgcgtacaaaggggagagagtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacctgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcatcattatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataagactgt +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaaccctca +ccactggctccctcatcgcccgggcatcagggctgcttcatgagaggctagatgagtttgaactacagggcc +cagccctcaccaccttcaatttcgatcgcaacaaagtgctcgccttcagacaacttgctgctgagaataaat +atggactgatggacacaatgagggtcgggaaacagctcaaggacgtcagaaccatgccagagctcaaacaag +caatcaagaacatttcaatcaagaagtgccaaatagtgtatggtggttgcacctacattcttgagtctgatg +gtaagggcaatgtgaaggtcgacagggtccagagcgccgccgtgcagaccaacaacgagctggccggtgccc +tgcaccacttgaggagcgctagaatcaggtactatgtcaagtgtgtccaagaggccttgtattccatcatcc +aaattgctggggctgcattcgtcacctctcgcatcgccaagcgcatga------acatacaaaatctgtggt +ccaagccacaggtggaagacacagagga--------gatcaccagtaaggacgggtgcccaatgcctaag-- +-gac----gaagagg---agttcgtcgtttcatccgacgacatcaaacctgagggcaagaaggggaagaaca +agactggccgcggcaagaaacacacagctttttcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggatcagggaggaaaggaatggcaagtactccatagaagaatacctccaggacagggacaagtac---t +atgaggagttggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacgaggaaacaacgcaaggaggagagagcctctctcggtctggtcacaggcgctgaaa +tcaggaaaaggaacccagatgacttcaaacctaagggaaaattgtgggctgatgatgacaggggtgtggact +acaatgagaaactcagcttcgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gtttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtgcccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggagctcatgcccctggcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacgggatccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccaacactcagcaccaaaaccaaa +ttttggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagctgaagccattcacagaaccaaggggc +aaaccaccaaagccaagtgtgctggaggctgccaagaagaccatcatcaatgtccttgagcaaacgattgac +ccacccgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagccgcgctcaaggatgagctggtcaag +actgacaagatttatggtaaaatcaagaagaggctgctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgagctcaaagctcactgtgtcacactccccgttagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgactac +t-cacggtgggactcaacacaacagagggccgtgttggaagcagctctagaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcagaagacctcctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttatcccctgacatcatacaggccaactccctcttc +tccttctacggagatgatgaaattgtcagcacagacataaaattggatccagagaaattgacaacaaagctc +agagagtacggattgaaaccaactcgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccacggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagctggtcattgcagagctaaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagccggcgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatttgaacccctacctttcccatttggctagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tggaaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccagatcactatgttcccccatgt +gataacagatgttaggcaattggaacctgtgatgatccccctacccgatgttaggaacaatttctaccatta +caaccagacaaatgac---cccaccctcaaattggtagcaatgttgtacacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaactaaaccattctctatcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcccctggaaaggctgttcacgggccccagcaatgcctttgttgtccaaccaca +aaatggcaggtgcacgattgatggcgtgctccaaggtaccacccaactgtcccctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ca---- +-------gtcgta----------------------------------acttcaca----------------- +----------------atgaatttggcctcccaaaactggaacagttacgacccaacagaagaaatcccagc +ccctctgggaaccccagatttcgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------gctcacaaagccacagt +gtacactgggagcgcccccttttccccaaaattgggcagaatccagtttgaaa---------ccgacacgga +ccgtgacct---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggcaccgccgcccgaaatgaaccccagcaatgggtgctcccaag +ctactcgggcaga-agcact------cacaacgtgcacctggcccccgctgtggcccccaccttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctccctcaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgttgagatttgtgaatccagatacaggcagagttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagccgccattgctggattggcatccgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgagaacaacagaaaattg +cagcaagattccttccaatttagcagtaaattgcagcaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaggttgcaacaggaactgatgaagctcaagcaagcaatgctcctagagggc +gggttctctgggacagacgcagctcgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatccaatgcaggccgcttctctaccccc--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagcta------gggctgc------------------------------ +------------------------------cgcccctacccggggttcctcc------------------ag +catgtctt-----------ctatc------------tcctcttctgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------gc +ttagttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgagggtca +gaataggggtt------------------------------------------tcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122724.1/1-7507 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.12/HO-41 +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcctccacccaacgg------ggaggatgaaccagtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagcttaccactgtcagccagcc +gggtgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccggacactctcaggaggttgcacggagagtcgtt +tccctacacagcttttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactctaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgagacctctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctatgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgagaacaaccacatgactgccctcctaaaagacaaagacagcctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgtcgttgtgatgatatcaggcaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggacgcatataagggagaaagagtcgttctgtgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagagcttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaggtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgttggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcagggctactccatgagaggttagatgagtacgagctgcagggtc +caacccccaccaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttaatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgcaagagctcagacaag +cactcaagaatatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagtacagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccaccttaggtgtgccagaattagatactatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtttcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaaaaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactctatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagatgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgatgtgacaggcatgatcctagaagaaggtgcgcctgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacatagtcattggagtccacacggctgct +gcccgtggaggaaacactgtcatatgcgccacccaggggagcgagggagaagccacacttgaaggcggtgat +aacaagggaacctattgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggaccaattaaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgat +ccacctcaaaaatggtcattcgcgcaggcatgcgcatcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaagagggaaagaatatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcgaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataagtatcactatgatgctgattac +t-cccgatgggactcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cggaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgtacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacgaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattagacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggatcagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccagtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatatctagcacacctttctagaatgtataa +tggttatgcaggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgtcaggactttagaaccagttttgttgccccttcctgatgttaggaataatttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtatttactgtctcctgcagggtgcttacccgaccttcccctgattttgattttaattactt +ggtcccccctactgttgaatctaaaactaaacccttcacactccctatcttgactataggggagttaaccaa +ctccagg---ttccctgtgcctatagatgagctctacaccagtcccaatgagagtctggtggtgcaacccca +gaacgggagatgcgcactagatggggagctgcagggcacgacccagctccttcccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------ta---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggttaccaacatcaacgggaccccttttgacccaacagaggatgtcccggc +tcctctaggcacaccagatttctctggcaagctctttggcgtgctaagccaga---gagaccatgata---- +-------------------------atgcctgt--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacccacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtctcttgcctcaagaatggattcaacatctttaccaagagtcggccccctcaca +atcggatgtagcgctgattaggtttacaaatccagacacaggacgtgttctgtttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggcagcagaccgattgtggtaccagccaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcaattgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccaccaaacagctgcaggctgaaatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcggttaatgcacctatgactcaggtcttagactggaatggg +accaggtattgggcccccggagccacgaaaaccactactttctccggtggattcactaatg----------- +-------------------------------tttctca---------------------------------c +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacaccagccacatcagcccctacgcctgtttccagac----------ccag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cctccaatcc------ttctttt---------------------------t +cagctag--------gagttcctctagtgtttcttctcaacctacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctccagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagata--------- +---g-t-c-t-ttattt---tct---tt------cct------------t-tgaaga------------tt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122725.1/1-7507 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P12-GII.12/HO-42 +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcctccacccaacgg------ggaggatgaaccagtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagcttaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccggacactctcaggaggttgcacggagagtcgtt +tccctacacagcttttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactctaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctatgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgagaacaaccacatgactgccctcctaaaagacaaagacagcctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgtcgttgtgatgatatcaggcaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggacgcatataagggagaaagagtcgttctgtgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagagcttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaggtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgttggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcagggctactccatgagaggttagatgagtacgagctgcagggtc +caacccccaccaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttaatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgcaagagctcagacaag +cactcaagaatatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagtacagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccaccttaggtgtgccagaattagatactatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtttcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactctatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgatgtgacaggcatgatcctagaagaaggtgcgcctgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacatagtcattggagtccacacggctgct +gcccgtggaggaaacactgtcatatgcgccacccaggggagcgagggagaagccacacttgaaggcggtgat +aacaagggaacctattgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggaccaattaaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctcaaaaatggtcattcgcgcaggcatgcgcatcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaagagggaaagaatatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcgaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataagtatcactatgacgctgattac +t-cccgatgggactcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cggaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgtacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacgaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattagacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggatcagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccagtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatatctagcacacctttctagaatgtataa +tggttatgcaggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgtcaggactttagaaccagttttgttgccccttcctgatgttaggaataatttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtatttactgtctcctgcagggtgcttacccgaccttcccctgattttgattttaattactt +ggtcccccctactgttgaatctaaaactaaacccttcacactccctatcttgactataggggagttaaccaa +ctccagg---ttccctgtgcctatagatgagctctacaccagtcccaatgagagtctggtggtgcaacccca +gaacgggagatgcgcactagatggggagctgcagggcacgacccagcttcttcccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------ta---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggttaccaacatcaacgggaccccttttgacccaacagaggatgtcccggc +tcctctaggcacaccagatttctctggcaagctctttggcgtgctaagccaga---gagaccatgata---- +-------------------------atgcctgt--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacccacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtctcttgcctcaagaatggattcaacatctttaccaagagtcggccccctcaca +atcggatgtagcactgattaggtttacaaatccagacacaggacgtgttctgtttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggcagcagaccgattgtggtaccagccaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcaattgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacaacaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccaccaaacagctgcaggctgaaatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcggttaatgcacctatgactcaggtcttagactggaatggg +accaggtattgggcccccggagccacgaaaaccactactttctccggtggattcactaatg----------- +-------------------------------tttctca---------------------------------c +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacaccagccacatcagcccctacgcctgtttccagac----------ccag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cctccaatcc------ttctttt---------------------------t +cagctag--------gagttcctctagtgtttcttctcaacctacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcaacca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctccagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga------------tt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122726.1/1-7506 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.12/TO-54 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagtat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactagtc-------aaaaagatccc +tcc-----------------------------tcctccacccaacgg------ggaggatgaaccggtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagctaaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcttcatgtgattg +gacttttgcaggcatagtggaatctttaattctcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatggtcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgactaccctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggtaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +cgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaagtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcagggctactccatgagaggctagatgagtacgagctgcagggcc +caacccccactaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaacatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttaggtgtgccaggattagatattatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatagtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggcctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagagcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccaaggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacaggtatgatcctagaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagagggaatgactacatagtcattggagttcacacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgcggtgcaccaatcttaggtccagggagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcaaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagaggcactccagatataagtatcattatgatgctgattac +t-cccggtgggactcaactcaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattggacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggaacagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctaggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcgggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttcctgatgttaggaataatttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtattcactgtctcctgcagggtgctcacccgaccttcccctgattttgattttaattattt +ggtcccccctactgttgaatctaaaaccaaacccttcacactccctatcttgactatgggggagttaaccaa +ctccagg---ttccctgtacctatagatgagctctacaccagtcccaatgagagtctggtggtgcagcccca +gaacgggagatgcgcactagatggggagctgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------tg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacatcaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagccaga---gagaccatgata---- +-------------------------atgcctgc--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtcttttgcctcaagaatggatccaacatctttaccaagagtcggccccctcaca +aacagatgtagcactgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggtagcagaccgattgtggtaccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gcacaagtccaggccaccaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacctatgactcaggttctagactggaatggg +accagatattgggcccccggagccacgaaaaccactactttctccggtggattcaccaatg----------- +-------------------------------tttctca---------------------------------t +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacatcagccacaccagctcctgcgcctgtttccagac----------ctag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttccaatcc------ttctttt---------------------------t +cagctag--------gagttcttctagtgtttcttctcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga-----------ttt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122727.1/1-7509 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.12/TO-56 +-------------gat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagtat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactagtc-------aaaaagatccc +tcc-----------------------------tcctccacccaacgg------ggaggatgaaccggtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagctaaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcttcatgtgattg +gacttttgcaggcatagtggaatctttaattctcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatggtcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgactaccctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggtaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +cgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaagtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcagggctactccatgagaggctagatgagtacgagctgcagggcc +caacccccactaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaacatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttaggtgtgccaggattagatattatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatagtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggcctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagagcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccaaggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacaggtatgatcctagaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcctttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagagggaatgactacatagtcattggagttcacacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgcggtgcaccaatcttaggtccagggagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcaaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagaggcactccagatataagtatcattatgatgctgattac +t-cccggtgggactcaactcaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattggacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggaacagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctaggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcgggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttcctgatgttaggaataatttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtattcactgtctcctgcagggtgctcacccgaccttcccctgattttgattttaattattt +ggtcccccctactgttgaatctaaaaccaaacccttcacactccctatcttgactatgggggagttaaccaa +ctccagg---ttccctgtacctatagatgagctctacaccagtcccaatgagagtctggtggtgcagcccca +gaacgggagatgcgcactagatggggagctgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------tg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacatcaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagccaga---gagaccatgata---- +-------------------------atgcctgc--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtcttttgcctcaagaatggatccaacatctttaccaagagtcggccccctcaca +aacagatgtagcactgattaggtttacaaatccagacacaggacgtgttctatttgaagcgaaattacacag +gagtggttacatcacagtggccaatactggtagcagaccgattgtggtaccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gcacaagtccaggccaccaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacctatgactcaggttctagactggaatggg +accagatattgggcccccggagccacgaaaaccactactttctccggtggattcaccaatg----------- +-------------------------------tttctca---------------------------------t +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacatcagccacaccagctcctgcgcctgtttccagac----------ctag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttccaatcc------ttctttt---------------------------t +cagctag--------gagttcttctagtgtttcttctcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga-----------ttt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122728.1/1-7504 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.12/TO-57 +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagtat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactagtc-------aaaaagatccc +tcc-----------------------------tcctccacccaacgg------ggaggatgaaccggtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagctaaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagccgcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcttcatgtgattg +gacttttgcaggcatagtggaatctttaattctcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatggtcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcattccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgactaccctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggtaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +cgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaagtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcagggctactccatgagaggctagatgagtacgagctgcagggcc +caacccccactaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaacatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttaggtgtgccaggattagatattatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatagtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggcctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagagcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccaaggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacaggtatgatcctagaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagagggaatgactacatagtcattggagttcacacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgcggtgcaccaatcttaggtccagggagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcaaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagaggcactccagatataagtatcattatgatgctgattac +t-cccggtgggactcaactcaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattggacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggaacagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctaggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcgggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttcctgatgttaggaataatttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtattcactgtctcctgcagggtgcttacccgaccttcccctgattttgattttaattattt +ggtcccccctactgttgaatctaaaaccaaacccttcacactccctatcttgactataggggagttaaccaa +ctctagg---ttccctgtacctatagatgagctctacaccagtcccaatgagagtctggtggtgcagcccca +gaacgggagatgcgcactagatggggagctgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------tg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacatcaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagccaga---gagaccatgata---- +-------------------------atgcctgc--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtcttttgcctcaagaatggatccaacatctttaccaagagtcggccccctcaca +atcagatgtagcactgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggtagcagaccgattgtggtaccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccaccaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacctatgactcaggttctagactggaatggg +accagatattgggcccccggagccacgaaaaccactactttctccggtggattcaccaatg----------- +-------------------------------tttctca---------------------------------t +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacatcagccacaccagctcctgcgcctgtttccagac----------ctag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttccaatcc------ttctttt---------------------------t +cagctag--------gagttcttctagtgtttcttctcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga-----------ttt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122729.1/1-7498 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pg-GII.12/EH-21 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaatacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccattacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctttgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacgctcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgattcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactggcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaaaatgct +gtcatccgccgcgtctacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacgaattgcagctgcccgttccctggtacaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgctgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggtcgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccggctaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcgcactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagcagcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggaccctgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaatggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggaatt +ggttcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccggcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------ttgttc--------ct-tt------------gaa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122730.1/1-7455 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pg-GII.12/HI-31 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------gtcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaatacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccattacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcttcgcaaaggttgaactaacaccactgtctttgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacgctcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgattcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactggcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaaaatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacgaattgcggctgcccgttccctggtacaccgggcaaaagaagagct +ttccagtaggctaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgctgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggtcgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccggctaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccaggggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggtaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcgcactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagcagcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggaccctgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaattttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaatggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggaatt +ggttcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccggcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122731.1/1-7498 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pg-GII.12/YA-7 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaatacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcctaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattagaaatgtgggacggagagatctaccattacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctttgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgattcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactggcttcctgcgactg +gactttcgcaggagtagtggaagccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacgaattgcagctgcccgttccctggtacaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgctgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggtcgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtgacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccggctaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtacttgaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtttacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcgcactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctatcattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagcagcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggaccccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaatggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggaatt +ggttcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgttgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccggcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------ttattc--------ct-tt------------gaa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122732.1/1-7515 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.Pg-GII.12/EH-60 +------------agat---ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaatacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaaggttcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctttgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgattcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacgaattgcagctgcccgttccctggtacaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgctgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggtcgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagccttttcgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccggctaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggaccccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaatggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggttcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acaccagccacaccggcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------ttattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122733.1/1-7459 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.Pg-GII.12/HO-40 +--------------at---ggcgtctaac-gacgctttcgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagct +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaattaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataatagggaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtaagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttcccctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgagcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaagatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcgtccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccggcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgtaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgctgttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggcgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgttggatggggagttgcagggcactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagatctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccgtccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcac------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122734.1/1-7498 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.Pg-GII.12/KU-25 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaattaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtactttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttcccctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagcaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaggaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggttcacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatatttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcacgatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agtaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttagaaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggcactactcagctccttcccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggattcaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtagtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggggctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------gcatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggaccagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgcacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122735.1/1-7483 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pg-GII.12/OS-35 +-----------------------------------ttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttagtc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaagccaccagcggctattagcctcgcaaaggttgaattaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttcccctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccctattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagtaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagagctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccggcttacctcggaggcaaagacccc +agggtgaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggtgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattccc-------cttaaaggaggtgt-----ggcag--------- +--acccagtcattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccagaaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggtgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaa---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122736.1/1-7504 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pg-GII.12/GU-5 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaagtcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-tccccgagggaaacaactcaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggtg +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +gtatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcttcgcaaaggttgaattaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtatctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggagaatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgccttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgattg +gactttcgcaggagtagtggaatccctaattctctttgcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaattctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccagggatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtaggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactacgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttttcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgcagaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctatagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcagagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgtccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaaatac---t +acgaggaggtggccatagccagggctactgaagaggacttctgcgaggaagaagaagccaagattcgccaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcgggctggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaacgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggcatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccacgcaactatgaggatccagggtcga +actgtcggggggcagatgggtatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcatcaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcatgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggctgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccctgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaagtaacagatttgtctcctgacaccatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacattaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaatgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacagcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gaggaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccctttgatccaacagaggatgttccagc +tcccctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgacaatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccagcccacca---------------------------aattcactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggaccctccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattctcttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggccttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaaccgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taagaag----------------acatcagccacaccagcctcc---------------------------- +------atgcctgtctc--taggcccagttctg--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122737.1/1-7487 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P21-GII.1/EH-42 +----------------------gtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaccaatcatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaactgtcacccaact +ggaagagagctctacagcattcagcgttccccctcttagtcagagggagagcagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgggggttagt +gctcggtgtgcacaaaccaccagcagccatcagccttgctaaggttgagctgactcccttgtccttgtattg +gagaccagtgtacaccccac---agtacctcattccccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgctttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacaaaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtgcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaagatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctttagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaatggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactatgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacactcaactgtgacagaattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ccgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggttgggtcacagctcaagaacgtcaaaactatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacatacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccacctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aattcgtcatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggctaaaatccggcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatt +aggacagatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcactcacgcgaccatgaaaattcagggtcgc +gctgttggcggacagatgggcatgctactcacagggtctaacgctaagagtatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggcaatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaagtgcccccaaactcagcaccaaaactaaa +ttctggaggtcttccaccacccccctgccactcggaacctacgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcattgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactgccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaatcatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattactgggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggttatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcactcgaaccggtggctggggcttccatagccgcccctctaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagccccaaatggtgaatttacagtgtctccccgcaactctcctgg +tgaaattctgttaaatttagaattaggtcctgaattgaatccattcttagcacatctttcaaggatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgccgggaacgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccccattgagaaccttagtcctggacaaattacaatgttcccccacgt +gatcattgatgttaggacattagaacctgtacttttgcccctccctgatgttaggaatagcttctttcacta +caatcaggagtctgaa---ccccgtatgaggcttgttgctatgctgtacaccccccttagatctaatggttc +tggtgatgatgtgtttacagtttcttgtagggttcttactcgcccttctccagattttgatttcaattattt +ggttcccccaactgttgagtctaaaactaaaccattcaccctaccagtcttgactattggagaattgtcaaa +ttctagg---ttcccagctccaattgatgaactgtataccagtcccaatgagggtttggttgttcagcccca +aaacggcagatcaacactcgacggtgaactgttgggcaccacccaacttgtgccctcaaacatttgctc--a +ctgcg-----------------------------------------aggacgcatcaatgc----------- +-----------ccacttgccag------acaaccaac----------------------------------- +----------acc----------------------------------gttggaac----------------- +----------------atgcaggttacaaatccaaatggaactcccttcgaccctaccgaagatgttcctgc +accgctgggtacaccagacttcctagcgaatatctatggagtcaccagtcaga---gaaa------------ +-----cc------------ccgacaacacttgt--------cgc-----------gctcatgatggaatttt +ggcgacttggagccccaagttcacacccaagctggggtctgtggtcctgggca---------cttgggaaga +cagagattt---tgacataaaccaacccacga---------------------------ggttcacacctg- +--------ttgg------tttgtacga------------cactgaccacttcaatcaatgggctttaccaaa +ttactctggagcg-ctgact------ctaaacatgaatttggcaccctctgtcgcccccctcttcccaggtg +agcagttacttttcttcaggtcccacatacca-------ctcaaggggggcac-----ttcta--------- +--atggtgctattgattgcctactacctcaggaatgggttcagcacttttaccaggagtcagctccatcctc +tactgacgtggctctgatcaggtataccaaccctgacacaggacgcgttttgtttgaggccaaattgcacag +gcagggatttatcacagtgtcaaactctggctctaggcccattgttgtccccccaaatggctactttagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +agtgc---------agtaatggctggagcttttatagcagggcttgctggtgacttgctcaccaatagtgtt +ggttcacttgtgagtgctgg---ggccaatgcaataaatcaaaagatagactttgaaaacaacaagcaa--- +------------------------------ttacaacaggcttcttttaatcatgataaagagatgcttcaa +gctcaagtccaggccactaaacaactacaggctgatatgattgcactcagacagggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcgcctatgacgcaggtcctggactggaatgga +actaggtactgggcccccggagccacaaaaacaaccactttttccggagggttcactggctct--------- +tc-------------tcacgccaggactg----ttgat---------------------------------c +t-------------------------------gcctaggaaggcgccagccactccggca-tcagtgcctgc +gtctagacccagttctt--ctt-------------ctgcctctacggtctctactcgctcaacacttgtcag +cgggtctt--------------------------------ctagttttccttcctcaa-------------- +----------ctaaga-----gttctattag------tgttccttc---------------------ccaat +caacttc--------c------------------------------------c------------------c +gtcttc---------------------------------------ccggactagtgaatgggtgcgcaacca +aaatagggcactggagccttacatga---agggggcactacaaacagcttatgtgacgcctccttctagtag +ggcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +ggaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacagccgctcttcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------at-g--------at-cttc-------------ctt- +--------------cct---tctttc---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122738.1/1-7522 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P21-GII.1/TO-51 +----tcacttgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagagaattcc +ccc-----------------------------tcccccacccaatgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +gggagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccctt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttgtacgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttacacagcttttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttctttcgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattattcac +taggccaattaaggacattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggagattatgagctacaggggcccgaggacctcgccgtgga +actcgtgcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggatagccttgcaaccta +catgaggacccttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaggaatt +gtcaagtaggccccgaccggtcgttgtgatgatctcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgaaatggagt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcccctcacacttaactgtgacaggattgaaaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgtatagacttccttgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagacatgtggaaagacaccttcaaacctgacttctcacacataaaactga +cattggccccacaaggaggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagactctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgaatatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtacttgcttttaggcagcttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagagtgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacgtacacgcttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaagaacaccaatgtgcaaactaataacgagctctccggggctt +tgcaccatctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcatcgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagatttggagga--------gactggcaacgaggagggttgcccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +aaactggtcgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtata +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaggaagaggaggctaaaattcgtcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgatttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacagatacaaattcataagtcaggtgaattctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagtccacactgccgcc +gcccgtggaggaaacaccgtcatctgtgcaacccaaggaagcgagggtgaggccatgctagaaggtggcgat +aataagggaacctactgtggagcaccaatattaggccccggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacctggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggaccagttaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgattgaacagacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcttcactagacaagaccacttccagcggctaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggatgagctagtcaaa +actgataagatctatgggaagatcaaaaagagactcctgtgggggtcagacctgtcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaattcaaggcccattgcgttacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcggctatggaaataatgg-tcaaattctcat +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccctagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagatctgtcccctgacattatccaggcaaactccctattt +tccttttatggtgacgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacctttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactagaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaataataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattacatggcccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttctgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcactcgaaccggtggctggggcttccatagccgcccctctaaccggtcaaaataatgtgataga +cccctggattagaatgaattttgtccaagccccaaatggtgaatttacagtgtctccccgtaactctcctgg +tgaaattctgttaaatttagaattaggtcctgaactgaatccattcttagcacacctttcaaggatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgccgggaacgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctatcgagaatcttagtcctggacaaattacaatgttcccccatgt +aatcattgatgttaggacattagaacctgtactcttgcccctcccagatgttaggaatagtttctttcatta +taatcaggagcctgag---ccccgtatgaggcttgttgctatgctgtataccccccttaggtctaatggttc +tggtgatgatgtgtttacagtttcttgtagggttcttactcgcccttccccagattttgatttcaattatct +ggttcccccaactgttgagtctaaaactaaaccattcaccctaccaatcctgactattggagaattgtcaaa +ttctaga---ttcccagctccaattgatgaactgtataccagtcccaatgagggtttggttgtccaacccca +aaatggcagatcaacactcgacggtgaactgttgggcaccacccaacttgtgccctcaaacatttgctc--a +ctgcg-----------------------------------------aggacgcatcaatgc----------- +-----------ccacttgccag------acaaccagc----------------------------------- +----------acc----------------------------------gttggaac----------------- +----------------atgcaggtcacaaatccaaatggaactcccttcgaccccaccgaagatgtccctgc +accgctgggtgcaccagacttcctagcgaacatctatggagtcaccagtcaga---ggaa------------ +-----cc------------ccgacaacacttgt--------cgc-----------gcccatgatggaatttt +ggcgacttggagccccaaattcacacccaagctggggtctgtggtcctgggca---------cttgggaaga +cagagattt---tgacataaaccaacccacaa---------------------------ggttcacatctg- +--------ttgg------tttgtatga------------cactgaccacttcaatcaatgggctctaccaaa +ttactctggagcg-ctgact------ctaaacatgaatttggcaccctctgtcgcccccctcttcccaggtg +agcagttacttttcttcaggtcccatatacca-------ctcaagggaggtac-----ctcta--------- +--atggtgctattgattgtctactccctcaggaatgggttcagcacttttaccaggagtcagctccatcctc +tactgacgtggctctgatcaggtacaccaaccctgacacaggacgcgttttgtttgaggccaaattgcatag +gcagggatttatcacagtgtcaaactctggctctagacccattgttgtccccccaaatggctattttagatt +tgattcttgggttaatcaattttattctcttgcccccatgggaactgggaacgggcgcaga---------ag +agtgc---------agtaatggctggagctttcatagcagggcttgctggtgacttgctcaccaatagtgtt +ggttcacttgtgaatgctgg---agctaatgcaataaaccaaaaggtagactttgaaaacaacaagcaa--- +------------------------------ttacaacaggcttcctttaatcatgataaagagatgcttcaa +gctcaaatccaggccactaaacaactacaggctgacatgattgcactcagacagggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaacgcgcctatgacgcaggtcctggactggaatgga +actaggtactgggcccccggagccacaaaaacaaccactttctccggagggttcactggctct--------- +tc-------------tcacgccaggactg----ttgat---------------------------------t +t-------------------------------gcccaagaaggcgccagccactccggca-tcagtgcctgc +gcctagatccagttctt--ctt-------------ctgcctctacggtctccactcgctcaacacttgttag +cgggtctt--------------------------------ccaattttccctcttcaa-------------- +----------ctaaga-----gttctattag------tgttccttc---------------------ccaat +caatttc--------c------------------------------------c------------------c +gtcctc---------------------------------------ccggactagtgaatgggtgcgtaacca +aaacagggcactggagccttacatga---aaggggcactacaaacagcttatgtaacacctccttctagtag +gacttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +ggaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacagccgctcttcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaag------------ +------------------------------------at-g--------at-tttc-------------ctt- +--------------tct---tctttctttgagaattttgtctttca-------------------------- +------------------------------------------------------------------------ +- +>LC122739.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P21-GII.1/TO-55 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagagaattcc +ccc-----------------------------tcccccacccaatgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +gggagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccctt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttgtacgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttacacagcttttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttctttcgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattattcac +taggccaattaaggacattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggagattatgagctacaggggcccgaggacctcgccgtgga +actcgtgcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggatagccttgcaactta +catgaggacccttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaggaatt +gtcaagtaggccccgaccggtcgttgtgatgatctcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgaaatggagt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagtaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcccctcacacttaactgtgacaggattgaaaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgtatagacttccttgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagacatgtggaaagacaccttcaaacctgacttctcacacataaaactga +cattggccccacaaggaggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagactctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgaatatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtacttgcttttaggcagcttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagagtgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacgtacacgcttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaagaacaccaatgtgcaaactaataacgagctctccggggctt +tgcaccatctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcatcgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagatttggagga--------gactggcaacgaggagggttgcccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +aaactggtcgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtata +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaggaagaggaggctaaaattcgtcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgatttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacagatacaaattcataagtcaggtgaattctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagtccacactgccgcc +gcccgtggaggaaacaccgtcatctgtgcaacccaaggaagcgagggtgaggccatactagaaggtggcgat +aataagggaacctactgtggagcaccaatattaggccccggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacctggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggaccagttaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgattgaacagacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcttcactagacaagaccacttccagcggctaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggatgagctagtcaaa +actgataagatctatgggaagatcaaaaagagactcctgtgggggtcagacctgtcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaattcaaggcccattgcgttacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcggctatggaaataatgg-tcaaattctcat +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccctagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagatctgtcccctgacattatccaggcaaactccctattt +tccttttatggtgacgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacctttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactagaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattacatggcccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttctgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcactcgaaccggtggctggggcttccatagccgcccctctaaccggtcaaaataatgtgataga +cccctggattagaatgaattttgtccaagccccaaatggtgaatttacagtgtctccccgtaactctcctgg +tgaaattctgttaaatttagaattaggtcctgaactgaatccattcttagcacacctttcaaggatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgccgggaacgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctatcgagaatcttagtcctggacaaattacaatgttcccccatgt +aatcattgatgttaggacattagaacctgtactcttgcccctcccagatgttaggaatagtttctttcatta +taatcaggagcctgag---ccccgtatgaggcttgttgctatgctgtataccccccttaggtctaatggttc +tggtgatgatgtgtttacagtttcttgtagggttcttactcgcccttccccagattttgatttcaattatct +ggttcccccaactgttgagtctaaaactaaaccattcaccctaccaatcctgactattggagaattgtcaaa +ttctaga---ttcccagctccaattgatgaactgtataccagtcccaatgagggtttggttgtccaacccca +aaatggcagatcaacactcgacggtgaactgttgggcaccacccaacttgtgccctcaaacatttgctc--a +ctgcg-----------------------------------------aggacgcatcaatgc----------- +-----------ccacttgccag------acaaccagc----------------------------------- +----------acc----------------------------------gttggaac----------------- +----------------atgcaggtcacaaatccaaatggaactcccttcgaccccaccgaagatgtccctgc +accgctgggtgcaccagacttcctagcgaacatctatggagtcaccagtcaga---ggaa------------ +-----cc------------ccgacaacacttgt--------cgc-----------gcccatgatggaatttt +ggcgacttggagccccaaattcacacccaagctggggtctgtggtcctgggca---------cttgggaaga +cagagattt---tgacataaaccaacccacaa---------------------------ggttcacacctg- +--------ttgg------tttgtatga------------cactgaccacttcaatcaatgggctctaccaaa +ttactctggagcg-ctgact------ctaaacatgaatttggcaccctctgtcgcccccctcttcccaggtg +agcagttacttttcttcaggtcccatatacca-------ctcaagggaggtac-----ctcta--------- +--atggtgctattgattgtctactccctcaggaatgggttcagcacttttaccaggagtcagctccatcctc +tactgacgtggctctgatcaggtacaccaaccctgacacaggacgcgttttgtttgaggccaaattgcatag +gcagggatttatcacagtgtcaaactctggctctagacccattgttgtccccccaaatggctattttagatt +tgattcttgggttaatcaattttattctcttgcccccatgggaactgggaacgggcgcaga---------ag +agtgc---------agtaatggctggagctttcatagcagggcttgctggtgacttgctcaccaatagtgtt +ggttcacttgtgaatgctgg---agctaatgcaataaaccaaaaggtagactttgaaaacaacaagcaa--- +------------------------------ttacaacaggcttcctttaatcatgataaagagatgcttcaa +gctcaaatccaggccactaaacaactacaggctgacatgattgcactcagacagggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaacgcgcctatgacgcaggtcctggactggaatgga +actaggtactgggcccccggagccacaaaaacaaccactttctccggagggttcactggctct--------- +tc-------------tcacgccaggactg----ttgat---------------------------------t +t-------------------------------gcccaagaaggcgccagccactccggca-tcagtgcctgc +gcctagatccagttctt--ctt-------------ctgcctctacggtctccactcgctcaacacttgttag +cgggtctt--------------------------------ccaattttccctcttcaa-------------- +----------ctaaga-----gttctattag------tgttccttc---------------------ccaat +caatttc--------c------------------------------------c------------------c +gtcctc---------------------------------------ccggactagtgaatgggtgcgtaacca +aaatagggcactggagccttacatga---aaggggcactacaaacagcttatgtaacacctccttctagtag +gacttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +ggaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacagccgctcttcgctc +atctccgccggagaggggagtcaca--------agtttag--t-----------gaaaag------------ +------------------------------------at-g--------at-tttc-------------ctt- +--------------tct---tctttctttgagaattttgtctttta-------------------------- +------------------------------------------------------------------------ +- +>LC122740.1/1-7427 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P12-GII.3/EH-10 +------------------------------------------------------------------------ +--------c----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagagttggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgaactggtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagctcaccactgtcagacagcc +ggatgaaaccaatacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccact +gaccggaacaatcctggaaatgtgggatggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactcgcaccactttctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggaggctgcatggagagtcgtt +cccttacacagcctttgacaacaactgctacgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccaaaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagatataataggaaaagtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtagaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcggtgga +actcgtgccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcaaccaccttaagagcttgtaaagatcttggtgcatatggattggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggccatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctactggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaagactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatataagggtgaaagagtcgtcctatgggatgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcaa +agcgtgatttcccaggccaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caactcccaccacctttaactttgaccgcaataaggtgcttgcgttcagacagcttgctgccgagaacaagt +acggattgttagacacaatgagggttggaaagcagctcaaggatgtcaagaccatgccagagctcaaacagg +cactcaggaatgtcgcaatcaagaattgccagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccacctaaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtgaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtagaggatacagagga--------aaccgccaccaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agtttattgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +aatctggccgtggtaagaagcacacggcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagggaagaaagaaatggaaaatattccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaggaagaggccaagatccgacaaa +ggatttttagaccaacaaggaaacaacgcaaagaggagaggacctctctcggtttggtcacaggatctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaaactgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccgccgagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggaattcttt +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgccgtttgaggtttccaaaaccgatc +agaactgatgtgacaggcatgatcctagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctaggcaccacacca +ggtgactgtggctgtccctacatttacaagaggggaaatgactacgtagtcattggagttcacacggctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaattttaggtccaggaagtgccccaaaactcagcaccaagactaaa +ttctggaggtcgtccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccctcgttacaacaagttatgagggaccaactaaaaccattcactgagcccaggggc +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcgtcaacgtccttgaacaaacaattgac +ccacctcaaaaatggtcgtttgcacaagcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaatgactgttggaacggggagtcctttacaggaaaattagcagaccaggcttccaaggct +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgggcgttcggaggcctgatggaggaactcaaagcacactgtgtcacattacccgtcagagtgggtatg +aacatgaatgaggatggccctatcatctttgagagacactctagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagaaccgcacct-ggcccaaaaggtcgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aagatatcaatcaatgagggtctcccctccggggtaccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggtcacaaacctgtcccctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaaggaccacttgtcatctctgaagacctgaat +ggtctaactttcctgcggaggaccgtgacccgcgacccagcgggctggtttggaaagttggaacagagttca +atacttagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacattcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagccttctatagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcaacagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatctcctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataatttcttccatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtctttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaattttct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctattctgactatctccgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgtca +gaatggacgagtcacccttgatggtgagttgatgggcaccacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgatcaggctgacacaacaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggttcactagagatttcc------------actgagtc +tgaagattt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgacca------------tgagtcagactttcaacaatgggctcttcccga +ctatgcaggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcatttctaccaagaatcagccccctccca +aactcaagtggccctagttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagttgcacaa +attaggtttcatgactattgccaagagtggtgactccccaataactgttcccccaaatggatactttaggtt +tgagtcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgtgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggttcccaaacccacccccaacagtgggtcttcagtgaggtca +aattcaacccaaattac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggttaatcaaca +aaattttaatttggaaccacacatgc---ctggatctcttagaacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaagggggg------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122741.1/1-7538 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P12-GII.3/HO-27 +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagctcaccactgtcaggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccact +gaccggaacaatcctggaaatgtgggatggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactcgcaccactttctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggaggctgcatggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccaaaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcctatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtagaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatatggattggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggccatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctactggcgagaatcgccgctgcgcgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatataagggtgaaagagtcgtcctatgggatgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagttgcagggcc +caactcccaccacctttaactttgaccgcaataaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaagcagctcaaggatgtcaagaccatgccagagctcaaacagg +cactcaagaatgtcacaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccaccttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtgaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtagaggatacagagga--------aaccgccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacggcattctcaagtaaaggtctcagtgatgaagagtacgatgaataca +aaagaatcagggaagaaagaaatggaaaatactccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaggaggaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagaggacctctctcggtttggtcacaggctctgaaa +tcaggaagaggaatccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccgccaagcatctggtcgaggatagttaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgccgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctaggcaccacacca +ggtgactgtggctgtccctacatttacaagaggggaaatgactacgtagtcattggagttcacacggctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagactaaa +ttctggaggtcgtccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccctcattacaacaagttatgagggaccaactgaaaccattcactgagcccaggggc +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcgtcaacgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcacaagcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaatgactgttggaacggggagtcctttacaggaaaattagcagaccaggcttccaaggct +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgggcattcggaggcctgatggaggaactcaaagcacactgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagaaccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aagatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacatcgttcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaaggaccacttgtcatctctgaagacctgaat +ggtctaactttcctgcggaggaccgtgacccgcgacccagcgggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacattcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatctcctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaactttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttcttccatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaattttct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctattctgactatctccgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgtca +gaatggacgagtcacccttgatggtgagttgatgggcaccacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggttcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagactttcaacaatgggctcttcccga +ctatgcaggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcatttctaccaagaatcagccccctccca +aactcaagtggccctagttaggtatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgactttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgtgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacccccaacagtgggtcttcagtgaggtca +aattcaacccaaattac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctag---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattggatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122742.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.3/EH-51 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgggggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---aggtggcgtttctggtttgcctgaacttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggatggggagatctatcattacggtctgtatgtggagcggggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaggagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctagccatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagatctgatttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttagatgagtatgagctgcagggcc +cgacccccaccaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaataatgagcttgccggcgccc +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattctatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgagggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccaactgaaaccattcactgagcctaggggt +agaccaccaaaaccaagtgtgctagaagccgccaagaaaaccatcgtcaatgtccttgaacagacaattgat +ccaccccaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccaatttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggtctgatggaggaactcaaagcacattgtgttacactacctgtcagagtgggtatg +aatatgaatgaggacggtcctatcatctttgagagacactctagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaagttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgaaggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacttgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacggattgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggttggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagaaataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgttgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcttgcagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taagg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcgaaggt +ggacacaactgctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaatcaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagactttcaacaatggtccttacccga +ctattctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaaactgcataa +atcaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgagtcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgactgctggc +ggcttttcccctactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccagtcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagttcgcactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacggcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122743.1/1-7545 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.3/HO-25 +----ttgaa--gagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactatctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaggagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaactggt +catgaagtggttcttcccaaagaaagaggaagcgaatgagctagccatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaatgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattctatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggacacagagga--------aaccgctagcaaagatgggtgcccaaaaccccag-- +-gat----gatgaag---agctcgttgtctcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaagccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccaactgaaaccattcactgagcctaggggt +agaccaccaaaaccaagtgtgctagaagccgccaagaaaaccatcgtcaatgtccttgaacagacaattgat +ccaccccaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggtctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcctagcgtgatggacgtgggtgatttc +aaaatatcaatcaacgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacgatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagaaataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgttgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcttgtagagtgctaactaggcctagtcctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcgaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgagtc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgagacagacttccaacaatggtccttacccga +ctattctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaaa---------ag +ggttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccctactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ctaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122744.1/1-7540 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P12-GII.3/HO-26 +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagctt-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgatagaattcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccaccttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgctagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggccaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggc +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacagcaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggatcatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagctaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggaccagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122745.1/1-7536 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.3/KA-21 +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagtg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgatagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcgtttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgttataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacagcaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaatccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122746.1/1-7467 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.3/YA-2 +----------------------gtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagtg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatgggatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgatagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcgtttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgttataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacagcaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtacaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatatcgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatc----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgattctccaataactgcccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaatcgaggcaacaaagaggttacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtctggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaagggggga----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122747.1/1-7487 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P12-GII.3/KA-22 +----------------------gtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagtg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gagaccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +tccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagactaagacctgttgttgttatgatatcaggcaagccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagagcgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgatagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcgtttgtaacaacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgttataccccagggtgcacaggaattcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagccattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagcgccccaaagctcagcactaagactaag +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggctcctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacagcaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagatctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaatcatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaatccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaactaagaggttacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgtgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122748.1/1-7512 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P12-GII.3/SA-65 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaaccttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagcg----------tcaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaatacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacctttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgttgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgatagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaatggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgaactggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattttacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaataatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgatgtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagactgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcgg-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggccaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacaaaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaacttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-a--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122749.1/1-7468 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P12-GII.3/YA-3 +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagtg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacagcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagtctcgccaaagttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttccaccaagtctgcctcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaaaaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gtaagggtgaagtgagagttgatagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +aacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcgtttgtaaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccgtcgccagggcaaccgaagaggacttctgtgaagaggaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccgccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgttataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaaaagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttctggagatcatctacggcaccactcccacctggcacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgttggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaagacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacagcaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggaccaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttacttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagacttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttattctggtcag-ttcact------cacaacatgaacttagccccagccgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccaccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcataa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcgacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatctcaatttggaaccacatatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaagagggga----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122750.1/1-7503 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P12-GII.3/SA-64 +---------------------------------------------gctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggatctaaacgactcgtggtt +gtg---caggaggatgatccagaggacgactggtttctttagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcactatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtaatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccgagacctgttgttgttatgatatcaggcaggccagggatagggaaaacacaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaaaggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacgggaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcgtcagggctactccatgagaggttggatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cacttaagaatgtcgcaatcaaaaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgatagagttcaaaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgtcgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgatttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcctgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggcgcacccgaagggaccgtggttacattgctcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacagggtccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agtaaggggacttactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcactaagactaag +ttttggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggatccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactaaaaccttttactgagcctaggggt +aaaccgccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aatctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaggatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgctagcagcagccttggaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgacttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacatcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaattgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaagacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttgggaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggtccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcggcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttctcaatttggagctgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaacttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaggcctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctccctattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagacttccggggcagagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattggagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtccttacccga +ttactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcgggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaagaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggtttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctgcaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------ac------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgtcactccaccatctagtac +agtctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122751.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.3/HO-19 +----ccaaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaactggtc-------aagaagatccc +tcc-----------------------------tccctcacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtatacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgaggatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggataggtaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccggcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaacttaccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatctgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcgagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaaaagggggaatgactacgtagtcattggagtccacacagcagcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacgattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagagacttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggatgaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattatccaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttctttcatta +caatcaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcagatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaactcctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattgtttgaggccaagttgcataa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaaattgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacacctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ctt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atttttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122752.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.3/TO-70 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtatacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgaggatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggataggtaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccggcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaaggacgcattcaattctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaacttaccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatctgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcgagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaaaagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagagacttctctggggctcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggatgaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaat +ggcctaaccttcctacggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccggtcaacctcccgatgcctgacgttcgcaataacttctttcatta +caatcaagggtctgat---tcgagactgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcagatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagagtcggcccccgccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattgtttgaggccaagctgcataa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttagtttggaaccacacatgc---ctggatctcttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ctt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122753.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.3/TO-72 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataagcagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtatacaccac---agtatctcatctctccagacactctcaggagactgcacggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgaggatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggataggtaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccggcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttaccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgttaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcgagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaaaagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaaa +actgacaaaatttatggcaagatcaaaaagagacttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggatgaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaattaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgtcatctctgaagacctgaat +ggcctaaccttcttgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctatacctcctaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttctttcacta +caatcaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcagatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattgtttgaggccaagctgcataa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaaccaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaact +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttaaccgctggc +ggcttttcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccatgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--taacctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatcccttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ctt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122754.1/1-7534 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2005/GII.P12-GII.3/HO-21 +--------------------gcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacagaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctacgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggtatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcccgaggacctcgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactctcgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaggaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggagagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttgcaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcactactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactgg +ctctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacttttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacaaagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatatcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaaggaatggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagtctgttcataacttcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaatccagatacacaaatcgggtgaattctgtcgtttgagatttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacatagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggaccttcattgcaacaagtcatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtcctcgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaacgactgctggaatggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgcgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatacaaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggtggcagaagaccttctttctcccagcgtgatggacgtaggtgatttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaatctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagctttctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgaggttctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagacccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ttttgcagctataccccctaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggacgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttctttcatta +caatcaagggtctgat---tcgagattgcgtttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtactgactagacctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctccctattctaactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttaatgggcaccacccaactcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattgtttgaggccaagctgcacaa +actaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaaccaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacttcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccagat---------------------------------c +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +cgctcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatcccttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------ac-ttaa-attggatttga-ttt- +--------------aga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122755.1/1-7535 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P12-GII.3/HO-24 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaatacggcgtttagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggagaatgatccagaggacgactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggacgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaatatcttggcctcatgtgattg +gacttttgcaggtatagtggaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +cttgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccggggatagggaaaactcaccttgccag +ggagctagctaagaaaatcgcagcttcgcttacaggtgaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggggaaagagtcgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggttacaagaacttgctgacacctgcccccttacgctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattagactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaactgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccggtgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttgatcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaactgtggtcacgctactcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccatgcaaccatgaagatccaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatctacaagagggggaatgactacgtagccattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcgccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcgttcgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaagttggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggcctaatggaggaactcaaagcacactgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccatccggggtgccctgcacctcccaatggaattccatagcccactgg +cttctcactctctgtgcactctctgaggttacagacctatcccctgacattattcaggccaactccctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaaggaccccttgtcatctctgaggacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaggacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccccaggaattcccctgg +tgaagtgcttctcaacttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggagccggtcaaccttccgatgcctgacgttcgcaataacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaattttct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccacccaactcttacccagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacagttggataatctaaatgggaccccttatgatcctgcagaagacacaccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------tcggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttagatatgtcaaccctgacactggtagagtattgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgatatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaatcaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccacatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +ga-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtggggtca +cactcaacccaaatcac--tagtctgaactcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctgggtcccttaggacagcctttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122756.1/1-7536 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P12-GII.3/SA-54 +---------------t---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaatgccacaa +agg---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaatacggcgtttagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +gcttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggacgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaatatcttggcctcatgtgattg +gacttttgcaggtatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +cttgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaataaccacatgactgccctcctcaaagacaaagatagcttggcaaccta +catgagaacccttgacctcgaggaggagaaggccaggaagctttcaacaaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccggggatagggaaaactcaccttgccag +ggagctagctaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggggaaagagtcgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggttacaagaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgttaagtgtgtccaggaggccctgtattccatcattc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agtttgttgtctcatccgatgccatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggtgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaactgtggtcacgctactcatcaag +agaccaactggagagctcatgcccctggcagccagaatgggaacccatgcaaccatgaagatccaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatctacaagagggggaatgactacgtagtcattggagtccacacagctgct +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcgccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggtccttcattgcaacaagttatgagggaccaactgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccaccccaaaaatggtcgttcgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcatccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggcctaatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggctcaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccatccggggtgccctgcacctcccaatggaattccatagcccactgg +cttctcactctctgtgcactctctgaggttacaaacctatcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaaggaccccttgtcatctctgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaggacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtatcccccaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccaattgacaatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggagccggtcaaccttccgatgcctgacgttcgcaataacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgaaaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccacccaactcttacccagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacagttggataatctaaatgggaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------tcggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttagatatgtcaaccctgacactggtagagtattgtttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaatcaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccacatgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--tagtctgaactcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttgggaccacacatgc---ctgggtcccttaggacagcctttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ctt-taa--------------------atta-g--------at-ttaa-attggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122757.1/1-7488 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2007/GII.P12-GII.3/KU-23 +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagctcaccactgtctggcagcc +gggtgaaaccaatacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtacgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggttctggacctaaacgactcgtggtt +atg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgtcatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaagcaag +cactcaagaatgtcgcaatcaagaactgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtgaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------aaccgccagcaaggatgggtgtccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatattccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaag +aggccaactggagagctcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacgtagtcattggagttcacacggctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttttggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaaaggtggcccctcattgcaacaagttatgagggaccaactgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcacaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgactgctggaacggggagtcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaacgaggatggtcctatcatctttgagaggcactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcggcagccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacgaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaaggaccccttgtcatctctgaagacctgaat +ggcctaaccttcctgcggaggaccgtaacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccaattgacaatctaagcgcagctcagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgatgttcgcaataacttcttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtacacacctcttagggcaaataattc +tggggatgatgtctttactgtatcttgtagggtgctgactaggcctagccctgacttttcattcaattttct +tgtgccacctactgtggagtcaaagacaaaaccctttaccctccctattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagccaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gcccatgaccaggccgacacagcaacccctagattgttta---- +-------attact----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgaccctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +agacacaacagctggtcgtttcaccccaaaactaggctcattagagatatcc------------actgaatc +tagtgactt---tgatcaaaaccaaccaacga---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtccctcaagaatgggttcagcatttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccagatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtagg---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatactcacaagcactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaagttgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccatctctacaacctcaatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccagtcccccaaatccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccagca +aaattttaatttggaaccacacatgc---ctgggtcccttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------taggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacaaccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122758.1/1-7395 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P12-GII.3/HO-28 +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-gctgtcacttttaaacgag----ccctcggggcgcggcataagcagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtt-------aaaaagatccc +tcc-----------------------------ccccccacccaacgg------ggaggacgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgatcttaccacagtctggcagcc +ggatgaaaccaatacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggagagatctatcattacggcctgtatgtggagcgaggcctcgt +acttggtgtacacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggaggctgcatggagagtcgtt +tccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggaggatgatccagaggacaactggtttcttcagaccctaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtggccaacatattcttgtgtgcactatcttcgttattcac +taggcccatcaaagacataataggaaaggtgaggccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggacattgcagtaga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaggagaagatcggaaaaatgtt +gtcatccgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgagctggctatggtgaggtctatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaagaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgctctcctggcgagaatcgccgctgcacgttctctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgtcatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtcccctaacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccactaatctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaagctgg +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacggaaaaggcgttatgaaaactctca +ccactggctccctcatcgcccgagcgtcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgatcgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtacggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgacaaagttcagaacgccactatacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggtgctgcatttgtgaccacgcgcattgccaagcgcatga------acatacaagacctctggt +ccaagccacaggttgaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaaa-- +-gac----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaagagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggttacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtttccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaag +aggccaactggggagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatctaacgccaagagcatggacctgggcaccacacca +ggtgattgtggctgcccctacatttacaagagggggaatgactacgtggtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggtaaggacccc +agagttaagggcggcccttcattgcaacaagttatgagggatcaactgaagccattcactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgat +ccacctcaaaagtggacgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcttgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggcatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatacaaatatcactatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgctagcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttc +tctttctacggtgatgatgaaattgtaagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaggacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaagcagcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagttgaaagaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggagcagcgatagcagcacccctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccataccccctaacttcccaattgacaatctaagcgcagcgcaaattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaataactttttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtaccacccactgtagagtcaaagacaaaacccttcaccctccccattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaacgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatttgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagacttccgaggcaaagtgtttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacagtacaact--------aga-----------gcacatgaagcgaaggt +ggacacaacagctggtcgctttaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtccttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggccccctccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaagccaagctgcacaa +actaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gcttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +ggatctctagttgatgcaggggcggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaac +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagctcgcggggcgattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcgca-aacca--------- +gg-------------ctgtgcacagagccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcaatgggtcttcagtgaggtca +ttctcaacccaaatcac--tagtctgagttcacactcgaccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ccgggtcccttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtt----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122759.1/1-7302 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P12-GII.3/MI-9 +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------------aaaagatccc +tcc-----------------------------ccccccacccaacgg------ggaggacgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgatcttaccacagtctggcagcc +ggatgaaaccaatacggcgttcagtgttcccccactcaatcagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggagagatctatcattacggcctgtatgtggagcgaggcctcgt +acttggtgtacacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggaggctgcatggagagtcgtt +tccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcatggtt +gtg---taggaggatgatccagaggacaactggtttcttcagaccctaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtggccaacatattcttgtgtgcactatcttcgttattcac +taggcccatcaaagacataataggaaaggtgaggccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtaga +actcgtgccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgagctggctatggtgaggtctatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaagaggagaaagccagaaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgctctcctggcgagaatcgccgctgcacgttctctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgtcatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagagaatcgcagcttcgcttacaggagaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaactcgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccactaatctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaagctgg +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacggaaaaggcgtcatgaaaactctca +ccactggctccctcatcgcccgagcgtcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgatcgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtacggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgagagttgacaaagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattacgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggtgctgcatttgtgaccacgcgcattgccaagcgcatga------acatacaagacctctggt +ccaagccacaggttgaggatacagagga--------aaccgctagcaaggatgggtgcccaaaacccaaa-- +-gac----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaagagtacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatttttagaccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggttacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccgagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtttccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaag +aggccaactggggagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatctaacgccaagagcatggacctgggcaccacacca +ggtgattgtggctgcccctacatttacaagagggggaatgactacgtggtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggtaaggacccc +agagttaagggcggcccttcattgcaacaagttatgagggatcaactgaagccattcactgagcctaggggt +aaaccaccaagaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgat +ccacctcaaaagtggacgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatctatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gcccgagcattcggaggcttgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggcatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatacaaatatcactatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgctagcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtctcctgacatcattcaggccaactctctcttc +tctttctacggtgatgatgaaattgtaagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatctccgaggacctgaat +ggcctgaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgcactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaagcagcactccacggcccagcattctacagcaaagtc +agcaagctggtcattgcagagttgaaagaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtctcctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccataccccctaacttcccaattgacaatctaagcgcagcgcaaattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaataactttttccatta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtacacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtaccacccactgtagagtcaaagacaaaacccttcaccctccccattttgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaacgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatttgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccgaggcaaagtgtttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacagtacaact--------aga-----------gcacatgaagcgaaggt +ggacacaacagctggtcgctttaccccaaaactaggctcattggagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtccttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacccaggtggccctggttagatatgtcaaccctgacactggtagagtgttgtttgaagccaagctgcacaa +actaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gcttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataacaaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagctcgcggggcgattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcgca-aacca--------- +gg-------------ctgtgcacagagccgcgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcaatgggtcttcagtgaggtca +ttctcaacccaaatcac--tagtctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------caggactagggactgggtcaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtcccttaggacagcttttgttactccaccatctagtac +agcctct---aatt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122760.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P12-GII.3/EH-66 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggccgtcactttcaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgtcccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtagagcgaggccttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---aatatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaatgattcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccactatggatgattctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactagctatggtgaggtccatcgaggatgcggt +gctggatctcgaagcaattgagaataaccacatgactgccctcctcaaagacaaagacagtttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagtagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggattatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggttttgacaagaacggaaacaccccacacggaaaaggcgttatgaaaaccctca +ccattggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacacccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagagctcaaacagg +cactcaagaatgtcgaaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagagcgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgttaccacgcgcattgtcaagcgtatga------acatacaagatctctggt +ccaagccacaggtggatgacacagagga--------gaccgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgtaaagaggagagggcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgatttcaagcccaaaggaaagctgtgggctgatgatgacaggagtgttgatt +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccttggcggccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggaacgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcttacctcggcggcaaggatccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactaaaaccgttcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgctggaacggggaatccttcacagggaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacccgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcgcctaggaattcccctgg +tgaagtgctcctcagtttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttgattgcaatgctgtacacacctcttagggcaaataactc +tggggatgacgtcttcactgtgtcttgtagagtgctgactaggcctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgtcgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacatctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgatca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcataa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatagcaggattagctggtgatatactcacaaacactgta +gggtctctagttaatacagg---ggctagtgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttctttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgacgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggagtgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccctaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgaacca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaattttaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gaa---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122761.1/1-7541 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P12-GII.3/EH-67 +----------gaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggccgtcactttcaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagagcagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtagagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---aatatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaatgattcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgattctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtggtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactagctatggtgaggtccatcgaggatgcggt +gctggatctcgaagcaattgagaataaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacggaaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacacccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagagctcaaacagg +cactcaagaatgtcgaaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagagcgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgttaccacgcgcattgtcaagcgtatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------gaccgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgtaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcccaaaggaaagctgtgggctgatgatgacaggagtgttgatt +acaatgagagactcaattttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccttggcggccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtgggggaaacactgtcatttgtgccacccaggggagtgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcttacctcggcggcaaggatccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactaaaaccgttcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacccgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgacttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctctcaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagaccgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcgcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaggtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttgattgcaatgctgtacacacctcttagggcaaataactc +tggggatgacgtcttcactgtgtcttgtagagtgctgactaggcctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgtcgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacgcagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacatctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccgg- +--------ttggcattggagttgatca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcataa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatagcaggattagctggtgatatactcacaaacactgta +gggtctctagttaatgcagg---ggctaatgttattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttctttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccctaagtccacacccaacagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgaacca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gaa---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122762.1/1-7528 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P21-GII.3/HI-6 +--------------------------aac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgtaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaagccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagacaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaatcatt +tcttacaacg----------tcaa---agagggtgtctctggtttgcctgagctatcaacggtcacccaacc +ggaagagagttctacggcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccctt +gactggaaccatcctggaaatgtgggacggggagatctaccattatggcttgtatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccctgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgactcatggct +gag---cagaaggatgatacagaggacaacaggcttctttcgaccctaccaggattggaacaggaaacccct +ccccacaatggatgactccaaagtgaagaaggtggccaatgttgtcctctgtgctctctcctcattgtttac +tagaccaattaaggatattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgactg +gacttttgcaggcatagtggaatcattgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggtaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagaccttggtgcatatgggctggagatcctcaagctggt +catgaagtggtttttcccaaagaaagacgagacaaacgagctggctatggtgagatccatcgaggatgcagt +actagacctcgaggccattgagaacaaccatatgacagctctacttaaggataaggatagccttgcaaccta +catgaggactcttgacttggaggaggagaaggcgaggaagctgtccactaagtctgcctcaccggacatcgt +gggcacgatcaacgccctattgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaaaatcgcctcctcactcacaggtgaccagagggtgggccttatcccacgcaacggagt +tgaccactgggatgcgtacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgcccttagactccaggaactcgctgatacctgtcccctcacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataactaccaatttagctaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgtgtagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagatatgtggaaagataccttcaaacctgacttctcacacataaaactga +cactagccccacaaggaggctttgacaagaatggcaacacgcctcatgggaagggtgtcatgaagaccctca +ctgctagttctctcgttgcccgagcatcagggctcctccacgagaggctagacgagtatgagttgcaaggcc +caactcccacaacattcaacttcgaccgtaacaaggtgcttgcttttaggcaacttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaagaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagatttggagga--------gactagcaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaagccgagggcaagaaaggaaagaaca +aaactggccgtggtaagaagcacacagccttttccagcaaaggtctcagtgatgaggagtacgatgagtata +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaagacagagacaagtac---t +atgaggaggtggccatagccagggcaaccgaggaagatttctgtgaagaagaggaggctaaaatccggcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctctcggtttggtcacaggttctgaga +tcaggaagcgaaacccagatgattttaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaactcagtttcgaggctccaccaagtatttggtcacgaatagtcaattttggttcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcatcccccaaggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcacaaatcaggtgaattctgccggcttaggttcccaaaaccaatt +aggacagacgtcacgggcatgatcttggaggaaggtgctccagaaggcaccgtcgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgccaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatatacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgctagaaggtggtgat +aacaaaggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctaccacccggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggatcaactaaaaccattcactgagcccagaggc +aagccacccaaaccaagtgtgctagaagccgcaaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcgcaggcgtgtgcatcactagacaaaaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacaggaaaactggcagaccaagcatcaagggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggatgaactagtcaag +actgataaggtctatgggagtatcaaaaagagactcctgtgggggtcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattac +t-cccgctgggattcaacacaacaaagagcagtgctggctgcagctttggagataatgg-tcaagttctcat +cagagcctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgaggggctgccctctggtgtgccttgcacctcacaatggaactccatcgcccactgg +ctcctaacactatgtgcgctgtctgaagtcacagatctgtcccctgacatcatccaggcaaattccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagaaaaattgacaacaaagttg +aaggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattgcatggcccatcattctacagtaaaatt +agcaaactggtcatctcagaattgaaagagggtggaatggacttttacgtgcccaggcaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgttccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacctctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggtccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccccaatttttcaattgacaatctgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttcttccatta +caatcaagggtctgat---tcgagattgcgcttaattgcaatgctgtatacacctcttagggcaaataattc +tggtgatgatgtttttactgtgtcttgtagagtgctgactaggcctagccctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccctttactctccctattctgactatttctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatgttgtcgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacccagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgcttaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcagcccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccctatgaccctgcagaagacataccagg +ccccctagggacgccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----cc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgtttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaagcggattttcaacaatggtctttgcccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagagtgggttcagcacttctaccaagaatcggcccccgctca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattatttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataattgtccctccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatgctcacaaatactgta +gggtctttggttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatggg +acgaggtactgggcaccaaatgccacctccacaacttcgatgtcgggtggcttcaca-aatca--------- +gg-------------cagtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcaaactcgtccgggtcgtctcgatcca--------------g +cgggccta--------------------------------cagtagttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggta---cggtctcgaccgtacccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------aa-tt-aaattggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122763.1/1-7485 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P21-GII.3/HO-22 +---------------t---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgtaaaatcttcaagtgacg---------------gcgtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaagccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagacaatccc +ccc-----------------------------ccccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------tcaa---agagggtgtctctggtttgcctgagctctcaacggtcacccaacc +ggaagagagttctacggcattcagtgtcccccctcttagtcagagggagaacagagatgcaaaggaaccctt +gactggaaccatcctggaaatgtgggacggggagatctaccattatggcttgtacgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gaggccagtgtacacccccc---agtacctcattccccctgacactctcagaaagttgcatggggagatgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttctttcgaccctaccaggactggaacagaaagcccct +ccccacaatggatgactccaaagtgaagaaggtggccaatgttgtcctctgtgctctctcctcattgtttac +tagaccaattaaggatattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatcactgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggattggtttggtgctgggattcaccaaagagaaaatcggtaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatggactggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaattggctatggtgagatccatcgaggatgcagt +actagacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggatagtcttgcaaccta +catgaggactcttgacttggaggaggagaaggcgaggaagctgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctactgtcaaggattgcagctgcccggtctctagtacacagggctaaggaggaact +gtcaagcaggccccgaccagttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaaaatcgcctcctcactcacaggtgaccagagggtgggccttatcccacgcaacggagt +tgaccactgggatgcgtacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgcacttagactccaggaactcgctgatacctgtcccctcacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataactaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgtatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagatatgtggaaagacaccttcaaacctgacttctcacacataaaactga +cactagccccacaaggaggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagaccctca +ctgctagttctctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgatcgtaacaaggtgcttgcttttaggcaacttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacggaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaagaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagatttggagga--------gactagcaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +aaactggccgtggtaagaagcacacagccttttccagtaaaggtctcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaaccgaggaagatttctgtgaagaagaggaggctaaaatccggcaaa +ggatattcagaccaacaaggaagcaacgcaaagaggaaagggcctctctcggtttggtcacaggttctgaaa +tcaggaagagaaacccagatgattttaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaactcagtttcgaggctccaccaagcatttggtcacgaatagtcaattttggttcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcacaaatcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacgggcatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcgtcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgccaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatatacaagagaggcaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgctagaaggtggtgat +aacaaaggaacttactgtggagcaccaatattaggccctggaaatgcccccagactcagcaccaagaccaaa +ttctggaggtcttccaccacccccctaccacccggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggatcaactaaaaccattcactgagcccagaggc +aagccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcgcaggcgtgtgcatcactagacaaaaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacaggaaaactggcagaccaagcgtcaagggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggatgagctagtcaag +actgataagatctatgggaatatcaaaaagagactcctgtgggggtcagatctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacagataccattatgatgcagattac +t-cccgctgggattcaacacaacaaagagcagtgctggctgcagctttggagataatgg-tcaaattctcat +cagagcctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgaggggctgccctcaggtgtaccttgcacctcacaatggaactccattgcccactgg +ctcctaacactgtgtgcgctgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagaaaaattgacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgacccggctgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattgcatggcccatcattctacagtaaaatt +agcaaactggtcatctcagaattgaaagagggtggaatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattttcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacctctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagttcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccccaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcttaattgcaatgctgtatacgcctcttagggcaaataattc +tggtgatgatgttttcactgtgtcttgtagagtgctgactaggcctagccctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacctttcactctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacccagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgatcaggccgacacagcaacccctaggttgttta---- +-------attact----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccctatgatcctgcagaagatataccagg +ccccctagggacgccagattttcggggcaaagtctttggcgtggccagtcaga---gaaa------------ +-----cc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaagt +ggacacaacagctggtcgtttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------tgaagcggactttcaacaatggtctttacccga +ttattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgcgcccaacttccctggtg +agcagctcctcttctttcgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagagtgggtccagcacttctaccaagaatcggcccccgctca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattatttgaggccaagctgcacaa +attaggttttatgactatagctaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatgtactcacaaatactgta +gggtctttagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttacaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatggg +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +gg-------------cagtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccagactcccagatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagtagttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggta---cggtctcgaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122764.1/1-7483 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P21-GII.3/KU-30 +----------------------gtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccgcccacaccagagttggtt-------agagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtttgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagtgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtccttgtattg +gagaccagtgtataccccac---agtacctcatttcccccgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggctttttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaagcccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatcactaatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaggagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagtaggccccgaccggtcgttgtgatgatttcagggagaccaggcataggaaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatataaaggtgaaagggtcgttctctgggacgactacgggatgagtaaccctatcca +cgacgccctcagactccaagagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggctaacccagcgccactggattacgt +taactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccaaccagacatgtggaaagatacctttaaacctgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgtgcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagagctcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaacaaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactggtaatgaggagggttgtccaaagcctaaa-- +-aat----gatgagg---agtttgttatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagggacaagtac---t +atgaggaagtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcatcccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaagagggtgctccagaaggcactgttgccacacttctcatcaag +aggccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcaaggtcgc +actgttggtggacagatgggcatgttactcacggggtccaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtgggggaaacaccgtcatctgtgcaactcaaggaaatgagggtgaggccatgttagaaggtggtgac +aacaagggtacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaagaccaag +ttttggagatcttccaccacccccctaccacctggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagatcaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggggctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatggtacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggcatg +aacatgaatgaggatggacccataatctttgagaaacactctagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaggacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaattaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgcgcattgtctgaggttacagacctgtctcctgacattatccaggcaaattcactgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaagctaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccagaggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggcccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggctcatcttgctaggatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgttatatacacctcttagggcaaataactc +tggggatgatgtttttactgtgtcctgcagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgcttaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggtgtggctagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccg------------tgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttccggtgggcgg-----tcca---------- +--acggtattctagactgcctggtcccccaagaatgggtacagcacttctatcaggaatcagccccctccca +aactcaagtggccctggttaggtacgtcaaccccgacactggtagagtgttatttgaggccaagctgcacaa +gctaggcttcatgactatagccaagagtggtgactctccaataactgcccccccaaatggatatttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +ggatctttagttaatacagg---ggctaatgctatcaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgctcccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcaggtggcttcaca-agtca--------- +aa-------------ctgtgcgcagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gg---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122765.1/1-7526 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2005/GII.P12-GII.4/YA-16 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaaggtccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------tcaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcattcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaactgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaaccccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcga +agcgtgatttcccaggtcaacctgacatgtggaagaacgcgttcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaacactca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagagaaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggtggtgac +aacaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaagacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaaattggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctctctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagtagtgcctttgtcgtccaaccgca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtaggaaagatccaaggcatgctcacccaga------------------- +-----cc-----acaaggggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgtcgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcctccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacatacaatgcaggccgtttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122766.1/1-7559 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.4/TO-71 +----tcacttgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------ccccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctgtcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacgtattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagggcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgataggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agagctgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatattcct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgtcgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctacttccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacaaaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122767.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.4/TO-78 +-------------------ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaagggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcctgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagggcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcgcgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaagcaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgataggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgtcgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaaccccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ccttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122768.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.4/TO-74 +-------------gat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaggattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagtagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgttgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttcttcaggtctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacacacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122769.1/1-6771 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.4/TO-75 +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------ctggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaggattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagtagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgttgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttcttcaggtctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacacacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgc--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122770.1/1-7551 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.4/TO-77 +----------cgagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaggattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagtagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgttgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttcttcaggtctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacacacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctt----------------------------------------------- +------------------------------------------------------------------------ +- +>LC122771.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P12-GII.4/TO-67 +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaagagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatcccccgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaagaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgataggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggaccct +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgt +gctcgagcattcgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaggggccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgtcgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgttacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggcatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgtccccatgacaaaggctttggactggagtgga +acaaggtactgggctccagatgctagaactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgccactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122772.1/1-7551 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P12-GII.4/TO-73 +------------agat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaagccaccagctgccatcagcctcgccaaggttgaattagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaattgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaaggcctgtcgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtaggtctcatccctcgtaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgcccttaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagagcgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgaaagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgt +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccccac +cacatgaggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaggcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +caatcaatcaaatgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgtcgacttcactccaaagctgggcagcgttcagttcgcca---------ctgatacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtgcccacagaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actgtt------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgctgagattcgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +aacaggctatgttacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggtatgatgaaagtcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122773.1/1-7560 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P4-GII.4/YA-24 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatatcacaa +aga---------------------cccccacgaccacctactccagaactgatc-------acaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctatcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaactcttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctagccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaatgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tctttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattttacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattgt +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gc---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122774.1/1-7528 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P4-GII.4/OS-28 +----------------------gtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agagggtgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaggacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagctctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaggggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgttaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcgtctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaaatagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagttcttacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcatcccag- +--------tcggtgtcatccaggatggtagcaccacccaccggaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttgatcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcatttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggattggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagttccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-c-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122775.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P4-GII.4/GU-6 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgaccttgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctgaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctta +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtagaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagctcccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgtaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttaggaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aactgttccaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---g-a-a-t-tgat-----ta-----t------ctttt----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122776.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/KA-19 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacattaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatggtccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtagaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccagaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---g-a-a-t-tggt-----ta-----t------ctttt----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122777.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P4-GII.4/KA-11 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cgctcaagaatatttcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattataactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggagactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcgggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttcggaagacttagat +ggtttgactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtctttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccagaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aac---ttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttttatgagggggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---g-a-a-t-tgat-----ta-----t------ctttt----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122778.1/1-7531 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P4-GII.4/MI-11 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agagggtgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgagggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaagcacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggggtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +ttttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagggccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttttactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-c-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122779.1/1-7533 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P4-GII.4/YA-25 +-----------------------------------ttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggggtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatgtaaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccatcaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaac------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtgatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tttgc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122780.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P4-GII.4/KU-26 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttaccgagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtaattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagtcaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctctcagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgtt-----ta-----c------ctttt----------c-tt----t--------tcttt- +-------a-------gt---gtctcct--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122781.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P4-GII.4/TO-58 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccaccgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggaact +ttccagtagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaatccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcagtgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagcggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagctgctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaaatgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgtacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgttggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattat +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgccattgggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattccgttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaagggggatggctctacc--------cgc-----------ggccacaaagctacagt +aagcactggggatgtccacttcactccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---cgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccaaaatgaaccccaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaggaatgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +gtcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtagg---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctgatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcagcagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +actaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgttcccgctcggggcttctct------------------ag +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaacttatcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122782.1/1-7541 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2005/GII.P4-GII.4/YA-15 +----------------------gtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgttacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactgacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtacatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcattc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccggcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaagaggaggaggccaagatccggcaga +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaagaccaag +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaaccccagattttgtaggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggggggatggctcgacc--------cgc-----------ggtcacaaagccacagt +aagcactggaagtgtccactttaccccaaagctgggcagtgttcaattctcta---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaaa +ctattcaggtaga-gatagt------cacaatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctctaatcaatgccgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------g +tcaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacaccct-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cattc------------tt----t--------tcttc- +-------a-------gt---gcct------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122783.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P4-GII.4/OS-3 +---------------------------------------------------------------------agc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagagattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gaa---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaggccaggaaactttcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctataca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggcccctcagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggtaatgtgaaggttgacagaatccaaagcacctccgtacagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaaggaaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aataaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcctgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagacttggcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaactgactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggggaggccgctctccacggtccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtctttacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtctccgcccagggttcctcc------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122784.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/OS-8 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcacttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctgatcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggtacctatgaaccagcctatcttggtggtaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattttccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgccaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgtaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtgatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122785.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/GU-1 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccagggatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttcggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaagggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacagccgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcacccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataacgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccctattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcactactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgcttacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacgggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122786.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/GU-3 +-------------gat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggttttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctttgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccagggatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttcggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaagggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacagccgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatccccgagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcactactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccctactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-c-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122787.1/1-7551 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/GU-4 +------------agat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccagggatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgcttttagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttcggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaagggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgaaggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacagccgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcactactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgcttacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccctactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgaggcagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122788.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P4-GII.4/KA-23 +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttactcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctacttcatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgtaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtcacaatcaagaagtgccaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagccgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaatctgaaggaccccttgtcatttctgaagacctgaat +ggtctaactttcctgcggagaacagtgacccgcgacccagctggttggtttggaaaactggagcaaagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---tgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagttgatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagcgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagaacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaggaggcagccccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaacgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaagcaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccctgcccggggtccctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a-------gt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122789.1/1-7559 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/EH-69 +----ctaactggagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtctcat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagctttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttactaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcaggccaacaaggaaacaacgcaaggaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggtccagggagcgctccgaagcttagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgctctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtatcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ctaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122790.1/1-7554 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/GU-11 +---------tctgggt---ggtgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggacggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggtgagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctctaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggacccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtgatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122791.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-48 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtgacacctacacacttgaggctgatg +gcaaaggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacataagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggacccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------tactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtgatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122792.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/MI-17 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgtaaaatctccaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcgaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcgatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122793.1/1-7509 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-36 +----------------------------------------------------------------------gc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatatcgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcttccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggatgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggac +ggcctgacattcctccggagaaccgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaagaggctacaacaggaattgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggtgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122794.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/TO-14 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgaactcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttat +acttggagtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaattcaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttaggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatcct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122795.1/1-7507 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-3 +--------------------gcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggacgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122796.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-7 +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggacgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122797.1/1-7526 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-38 +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctagccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagagactagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaataacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gctcgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +atcctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctgcccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122798.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-39 +------------ggcg---gccgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctcgactttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcatctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggagggaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taggtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122799.1/1-7532 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/SH-9 +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgactttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacattgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggagggaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122800.1/1-7524 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-40 +----------------------------c-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatatcgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcttccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggatgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacactccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagaccttaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaacccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +agcatgaatgaggatggccccatcatctttgagaagcactccagatacagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattacagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaattgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122801.1/1-7559 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/KU-29 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +tagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactagattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatggagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccccggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtacttctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccgccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcatccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122802.1/1-7512 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/TO-22 +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccataccagaattggta-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagtaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggcggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cggaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggtgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122803.1/1-7538 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/TO-24 +----------------------------c-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaagagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattttgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtactcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------gcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122804.1/1-7541 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-35 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccttacttaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattttcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgacaccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagctggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgtttgtcaccccaccatccagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------gtttt- +-------a-------g-------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122805.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-37 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaact +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccatttacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagctggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacatttctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaaagac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------gcttt- +-------a-------gt---gtctt----------------------------------------------- +------------------------------------------------------------------------ +- +>LC122806.1/1-7533 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-42 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccatcc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaagcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggccataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccatttacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagctggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctatcatta +caatcaatcaaaagac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122807.1/1-7507 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/GU-13 +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgagttctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggcgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaa------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122809.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-5 +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatattgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccatgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttc--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122810.1/1-7540 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/HO-30 +------------agat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +gactgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctgggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacaggaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcatccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtactagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tctt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122811.1/1-7540 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/HO-31 +-------------gat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +gactgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctgggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacaggaga--------gatggccaacaaagatggttgtctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcatccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122812.1/1-7504 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/TO-12 +---------------------------------------------------------------------agc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtacacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatgggatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatggag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggccgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgattccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagct------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttc--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122813.1/1-7511 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/GU-16 +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaactaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggactcatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatctacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcacaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggacgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttgtctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----ct-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-g-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122814.1/1-7544 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/TO-28 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcggccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaaaaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---a +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggct +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacgaacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcactctggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcc------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122815.1/1-7513 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-44 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +agaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttagacccagaaaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgttccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagctaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122816.1/1-7559 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/GU-14 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagttcatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttc +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcatctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagacggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcagtgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcttttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122817.1/1-7519 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/TO-29 +-------------------------taac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggtatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagaccagtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaataaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggggaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaagaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggatcagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcagtcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctaacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgctcttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctagtcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggctc--------tacagctggttctggtgccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------c------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122818.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/MI-16 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtagtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactagattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacgatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaaaaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctaccaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaagacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaatactttctatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgcggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122819.1/1-7533 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/HO-29 +------------agat---ggcgtctaac-gacgcttccgctgccgccgttgcc------------aatagc +a------ac----aacgacatcgtaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcctcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggtc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgttatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122820.1/1-7527 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.Pe-GII.4/TO-11 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcactaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaaa +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgtcactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtcttatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacgggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcacggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggcgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaacgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctt----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122821.1/1-7547 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/GU-12 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactgttcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatgggatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtagagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgccagaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccattatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaacta +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatggagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactac---------------------------------------aaggactaggagctgggtcgaggatca +aagtaggaatttatcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122822.1/1-7541 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-41 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacctacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaatcaaagagagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaatatacttaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcggaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcagggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgat +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagcgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcctttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcagataattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacttcaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ttcttt +a-gt-------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122823.1/1-6962 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.Pe-GII.4/GU-7 +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagtagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaagagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattttgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtactcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgc----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122824.1/1-7527 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/KA-4 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactacctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgtgcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgtcactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcacccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggacgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctcttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttgtctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggggcgccaactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatatggcccccgctgtagcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagct------agggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ttaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagcgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------g-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122825.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-33 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------tgaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaatgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtatacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttttgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagtatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaaactc +aaggagtacggactgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgctaggactgcaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccaactagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acatccgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tctttt +t-ctt-ta-------gt---gtcc------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122826.1/1-7479 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-45 +--------------------------------------------------------------------cagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatatacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatctactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaagttggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcagggacgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagcaacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacagggaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggatctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgc-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122827.1/1-7542 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-1 +-------------------------taac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtagtc +tcttacagca----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacagcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagtaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaataccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcggacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagcattttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggtcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgaggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagacaaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagattaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattctatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgacgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcaa---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactga---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122828.1/1-7541 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/TO-4 +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtagtc +tcttacagca----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacagcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagtaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggaactggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgacgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaataccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcggacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagcattttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggtcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctcggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgaggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagacaaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagattaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattctatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgacgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacggactgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcaa---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactga---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122829.1/1-7554 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.Pe-GII.4/KA-24 +----aggaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggttatgaagaccctca +ccactggctccctcatcgcccgagcgtcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgcacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacctaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacgtcaaaattgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggcgtaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtaacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagtcagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagggtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacgtactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaaagtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgtac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcgcacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcggccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtggatgctcccaag +ctactcaggcaga-aatacc------cataatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------cataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accgtcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------agcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tggt-----ta-----t------ctctc----------c-tt----t--------tcttt- +-------a-------gt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122830.1/1-7431 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.Pe-GII.4/KA-9 +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------ttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggttatgaagaccctca +ccactggctccctcatcgcccgagcgtcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgcacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacctaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacgtcaaaattgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggcgtaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtaacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagtcagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagggtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacgtactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaaagtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgtac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcgcacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcggccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtggatgctcccaag +ctactcaggcaga-aatacc------cataatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------cataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accgtcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------agcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tggt-----ta-----t------ctc----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122831.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P3-GII.3/HO-20 +---------tgaagat---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaataaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattagtg-------aaaagcatacc +ccc-----------------------------accaccacccaatgg------cgaggatgaaccaaaggtg +gtatataagg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtacccccacttagccaaagagaggtcggcgaagccaaagagccgct +acctggatccattctggaaatgtgggatggtgagatctaccactacgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgccgcaataagcctcgccaaaattgaactgacaccactgtctctctactg +gagggtggtttacactcccc---agtatttgatagccccagacactctgaagggcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttctttaggccgtaccaagattggaatagaaaacccct +accaaccatggatgagccaaaaatcaaaaaggccgcgaatgctgttctatgcgccctctcttcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattggcaacttgtgactg +gacttttgcaggcatagtggagtctcttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggcgactacgagatgcaaggcccagaagacctggccgtgga +gcttgtacccgtggtaatgggagggataggtttggtgctgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcaaccacgcttagggcctgcaaagatttaggggcctatggattggagatacttaagttggt +catgaaatggttcttccctaagaaggaagaggctaatgagttagccttggtaagggccatcgaggatgcagt +cctggatttggaggcaatagaaaacaatcatatgaccactctcctcaaggacaaagacagtctggccacata +catgaggactctcgacctggaggaagagaaagcaagaaaactgtccaccaaatccgcatcacccgacattgt +gggcacgataaatgcattattggcaaggatcgcagccgctaggtcactagtccataaggctaaggaggagct +ctcgagcagacagaggcctgttgtcgtgatgatatctggtagaccaggcatagggaagacccatctcgctag +agagctagccaagaaaattgcatcaaccctgtcgggtgaccagaggattggactggtgcccagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtactatgggatgactatggcatgagcaaccccataca +ggatgcactgaggcttcaagagttggccgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagtgatgccataatcataacaaccaaccttgcaaatccagcaccgctggactatgt +caactttgaggcttg-ctccaggcgcatagactttttagtgtatgcagatgcacctgacattgagaaggcca +agcgtgactttcccggtcaaccagatatgtggaaagatcactacagaacagactttacacacatcaaactcc +agttggcaccacaggggggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttccggtttacttcacgagagaatggatgagttcgagctccaaggcc +ccaatctaccaaccttcaattttgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtggacacattgagggtcggtagtcaactgaagagtgtcaagaccatggatgagcttaaacagg +ctataaagaacatcaccattaagaagtgccaaatagtgtacaacgggtgcacctacacaatggagtctgatg +ggaggggtaaggtttcagttgacagggtgcaaaacacaacagtccaaaccaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgcttccaggaagctgtctattctctactgc +aaattgctggtgcggcttttgtcacctcacgcatcgtgaggcgtatga------acatctcaagcctctggt +caaagccacccgttgaggagaatgatga--------atctgaaaacaaagaagggtgccccaagcctcga-- +-gac----gaagatg---acctcactattgactccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtctggccgaggtaagaaacacacagccttttcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggaagaaaggaatggaaaatattcaatagaggagtatctccaagatagggacaggtac---t +atgaagagctagccattgccaaggccactgaagagaacttctgtgaggaggaagagatcaagatccgtcaga +gaattttccgccccaccaaaaagcagcggaaagaggaaagagccacacttgggctcgtcacagggtcggaga +tcagaaagaggaacccagatgactttaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaacgagaggatagattttgaagcaccccctagcgtttggtcaagaatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacctcgacgcacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcacaaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgctcctgaaggaactgttgcatccatcctcatcaaa +aggacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgagaattcaagggaga +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacgtgtacaagaggggcaatgactttgtggtcattggagtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgaggggggtgac +gacaagggcacttattgtggagcccccattttaggacctggtagtgcaccgaagctgagcacaaaaaccaaa +ttctggagatcttccaacgctccgctcccgccaggcacctatgaaccagcgtacctaggtgggaaagatcca +cgtgtgaagggcggtccgtccctgcaacaggtcatgagagaccaactcaaaccttttacagagcccagaggg +aaaccaccaaacccgagtgtcctagattcagcaaagaaaaccatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggatacccgcac +cacgttcggaagaatgactactggaatggcgagtccttcacaggaaaacttgcagaccaggcctcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggatgagctggtgaaa +actgacaaaatctatggcaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgagctcaaggcaagttgtattacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-ctcgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtggctgaggacctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccatcaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttaccttgtgtgccctttctgaagtgacaggactaggccctgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactaactgcaaaactc +aaagagtatggcctcaaacccacccggcccgacaagaccgaggggccgctggtgatcagtgaagacctgaat +ggcttgacgttcctccgccgaacagtctctcgtgacccagcaggctggtttggaaagctggagcaaagttcc +atcctcaggcaactgtactggacaaggggacctaaccatgaagaccccagtgaaaccatggtgccgcatgcg +cagaggcccgtgcagctcatggcactactgggagagtcctccctacatggaccctcattctacagcaaggtc +agcaagttggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcattgttt +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagacccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtacaagcacctggtggtgagtttacagtgtcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaagtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaattttccaattgataacctgagcgcagcacagatcacaatgtgcccgcatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaacaatttctttcatta +taatcaagggtctgat---tcgagattgcgcttaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcatgcagagtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaagcccttcacccttcctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaacgggcgcgtcactcttgacggtgagttaatgggaaccacccaactcttaccgagtcagatctgtgcttt +caggg-----------------------------------------gcgtgctcacccgat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------atcagg----------------------------------ccgacacagcaacccctaggttgtt +taattattattggcacatacaattggataatctaaatggaacaccttacgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggcaaagtctttggcgtggccagccaaa---gaaaccccgac----- +------------a------------gcacaact--------agg-----------gcacacgaagcaaaggt +ggatacaacatctggccgtttcaccccaaaattaggctc-------attagaaat-----atccactgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcactccag- +--------ttggcattg---gggttgacaatg---------aggcagactttcaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttggccccagctgttgcacccaacttccctggtg +agcagctcctcttcttccgctcacagttaccat------cttctggtggacg------gtcca--------- +--acgggattctagactgcctggttccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aacacaggtggccttggttaggtatgtcaaccctgacactggtagagtgttgtttgaggctaagctgcacaa +gttaggtttcatgactatagctaagagtggtgattccccaataactgtccctccaaatggatattttagatt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcatttatagcaggattggctggtgacatattcacaaacactgta +gggtccttagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatccttcaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttgcaggctgacatgattgctatcaagcaaggggttttaaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaaagctacctccacaacttcaatgtcgggtggcttcactaatcaa--------- +gc--------------tgtgcacagaaccacgccaaat---------------------------------t +ctaaaac----------------gaaccaggcttccaaa--------------------------------- +----------------------------------------------tccacacctagt------------ag +tgggtctt-----------cagtg------------gggtcaaactcaacccaaagcaccagtctgagct-- +----------cacact-----cgtc---------------cgggtcgtcccgatccagcgggtctacagtcg +ttagctc--------------------------------------attaccat------------------c +ctctaa---------------------------------------caggactagggactggatcaaccaaca +gaatttcaatttggaaccacatatgc---ctggatctcttaggacagcttttgtcaccccaccatctagcac +agcctct---agtt------------------------------taggca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-tagatt---tgat--ttg-----a---------------------------attggattt- +------gat----ttgg---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC122832.1/1-7475 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P16-GII.13/AO-13 +--------------at---ggcgtctaac-gacgctaccgttgccgtcgcttgc------------aacagc +a------ac----aacgacaaggaaaaatcttcaggtgaaa---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaacccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagagaatacc +ccc-----------------------------tcccccacctaatgg---tgaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +tttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaacgattcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattatttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcctagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataaccacatgacaactctattgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggagaaagccagaagattgtccacaaaatctgcatccccagacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctagatcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcagagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctacgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctcctcttgattatgt +caacttcgaggcctg-ttctaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggatgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaagggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagagcacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgtacgccgcatga------acatacaagaactttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaagaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtacctccaagacagagacaggtac---t +atgaggaactcgccattgccaaggctacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccactaggaagcaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcaggttcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggggagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaaaaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtggacgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaactaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccaagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccctatttggcccatctatcaagaatgtacaa +tggatatgctggaggtgttgaggtgcaagtgctccttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaatcactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactgaccaa +ctcccga---tttcctatcccaattgagcaactgtacacggccccaaatgagaataatgtcgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgcggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaggtgagag +taca--------ggagaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaaaattcaccccaaaaattgggtcaattggactacatt---------ca---ataac +tgaaaacgt---gcaccccaatcaacaatcac---------------------------ggttcacccccg- +--------tcggagttgctc---agaatgaaaacaccccc---------tttcagcaatgggttctaccaca +ctacgcaggcgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggcctgcgg------gggcag-------- +-gatgctttcatggactgtctcctacctcaagagtgggtgaatcacttttatcaagaggctgctccctccca +agcagacgttgcccttatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggttttattactgtatcacacactggtgcctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgttgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaaactccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcggtcaacgccccaatgactagagtgttggattggtcagga +acacgctactacgctccaaattctgtgcagaccaccagttactctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggagggtcctctataacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtacaacaaca +aa---gggctcttagcccgtacatgc---aaggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcctcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctatttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------tgttta +a--atgtgattttattt---tcctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122833.1/1-7523 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P16-GII.2/HO-17 +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---taggaggatggtacaaaggacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +agattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgagaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaagccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggtatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcgctcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggatcctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgtttacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttaaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagataaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagtcggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatctggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgtt-- +---------tga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122834.1/1-7525 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P16-GII.2/EH-45 +------------agat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgcgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaagttaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcagacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgcccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaggtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatat +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcttgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcagttctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----tctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggtgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122835.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P16-GII.2/SA-51 +-------------------ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtaaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattatttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaataagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactggtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaagccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttactcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcagtgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcttattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122836.1/1-7487 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P16-GII.2/OS-38 +-------------------ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggctag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcttcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttgccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgatgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaggagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aatgatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggcg--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122837.1/1-7514 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P16-GII.2/HI-26 +---------------------cgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttggggttcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacacctctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +gtctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgagaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagaagtagaaaaggcta +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggttaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaacgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcaggtacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcgccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaactga-ttct---ac-------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122838.1/1-7518 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P16-GII.2/EH-46 +---------------t---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgcgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaagttaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaggggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcctccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaactgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcaaggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccggatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaggtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtagtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactaggggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +caatcaaaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcagccaaccagtca---------------------------agttcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcttgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcagttctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcgtttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctttcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122839.1/1-7513 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P16-GII.2/EH-43 +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gtcccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggagccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagacgtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcatcaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagaggaccacactaggactagtaactggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgaattttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtctccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaaggtaaacacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaggcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgaggggcccctgatcatcagtgaagatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcttcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttctttcacta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------cg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacacaatgg +ccct--------gggcaaaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctacttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcgctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggttctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------ag--------at +tcaactcgc----aacacaagcctctcccaatcaacgatctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-a--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122840.1/1-7533 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P16-GII.2/EH-44 +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gtcccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggagccgct +gacaggggcaatattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagacgtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcatcaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagaggaccacactaggactagtaactggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgaattttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtctccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaaggtaaacacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgaggggcccctgatcatcagtgaagatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcttcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttctttcacta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------cg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacacaatgg +ccct--------gggcaaaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctacttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcgctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggttctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgagacaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------ag--------at +tcaactcgc----aacacaagcctctcccaatcaacgatctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-tttt---acctttc--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122841.1/1-7501 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P16-GII.2/OS-246 +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagtca-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagagaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgagtacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttagtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaagtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggcttgctgcatgagaggatggatgagtttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atggactggtggataccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctatcatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattctatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccact---agaccaaagcga--------gccagaggtcaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtattctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagagataaaaatccgccagc +gaatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctccgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggagaggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaagcgtgcgcttcacttgataaaaccacctctagtggacacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagactac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaacctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggcgatgatgtgtttacagtttcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttctaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtcctcttttgacccctctgaggacatccccgc +ccctctgggcatacctgactttcaggggagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgatactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctaaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactgttgaatgggtcagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------ggtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122842.1/1-7515 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P16-GII.2/EH-6 +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccact +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggttttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacattgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaatccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagagatgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcattatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagatttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttataaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaggggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtgccatgcacttcccagtggaactccatctcacactgg +ttactaaccctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcaaatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaagaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122843.1/1-7430 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P16-GII.2/EH-8 +-----------------------------------------------------------------------c +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +aggtgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataacaactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccacttttaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtata +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaaaacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaggaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgctgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaggctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatggaaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctattctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactacttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgttcaggcccccaatggtgaatttacagtctctcctcgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtcccctttcgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------ag------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122844.1/1-7520 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P16-GII.2/HO-18 +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggctttttcagaccataccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctagggttcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggtgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttaagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccagggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggggaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggtggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccgataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ctactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacccgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaacggttc +aggcgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggtgaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgtcgctccagtatttccaggag +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggaaatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122845.1/1-7514 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P16-GII.2/TO-46 +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaagtat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacttacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctactctgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagtagtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggcaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcagatattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgccttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---tcc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122846.1/1-7482 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P16-GII.2/TO-17 +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggcgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgagttggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgctgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactctggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcagagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagcaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacaaaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggccagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtgattgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcagaccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122847.1/1-7515 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P16-GII.2/TO-30 +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggattttcctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagcttcggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgattacatagtcattggagtgcacacagcagca +gcccgaggtggaaacactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaaacccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122848.1/1-7370 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P16-GII.2/HI-30 +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------------agggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgctcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagaaatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagtt +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggggtccctatcaaacagattcaagttcacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctttcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattgatt---------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122849.1/1-7466 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P16-GII.2/MI-7 +----------------------gtctacc-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctaggtcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtatgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccctat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgccgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccattacctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttttatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------ag------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122850.1/1-7490 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P16-GII.2/TO-26 +----tcgggcgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gataaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgagtgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaacttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122851.1/1-7521 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P2-GII.2/HI-17 +----------------------gtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggtt +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacggaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggtaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggatataatg----aaccagc----aaatagaggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgcaccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaactctg +acaacaaccactggat-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tcct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122852.1/1-7525 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P2-GII.2/HO-16 +---------------t---ggcgtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacgtaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgatcctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggacataatg----aaccagc----aaatagaggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------tcaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaactctg +acaacaaccactggat-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ttaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122853.1/1-7531 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P2-GII.2/HO-13 +---------tgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagccaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttttgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggtaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctagcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagaacttggagcctatggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccctagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagggtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaaag +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacgcttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccacctcagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcataggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +ccccctcaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacgtctagtgggtaccctcac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggacctattgtcgcctagcgtggttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccggacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacaccacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggttttatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgagaaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaactcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacaaacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122854.1/1-7522 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P2-GII.2/YA-14 +---------------g---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtacattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagatcttggagcctatgggttggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagagtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgttgaggttgcaggaactggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacgcttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaggccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacagcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggcgac +aacaaaggaacatactgtggggcgccaatcctaggtcccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagccgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaatataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagtcgcagaggatctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccagacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctaactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaacattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtttttggtgtcatctcccaaa---gagataa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacatcacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctcttttttagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgtgcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122855.1/1-7520 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P2-GII.2/HO-14 +---------------------cgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----gacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagagtccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggacaacc +acctgaagctaatacggcctttagtgtgcctcccctcagccagagggagaacagggacgctaaggaaccgct +aactgggacaattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcgctgtactg +gagacctgtgtacacgcctc---aatatcttatatcacctgacaccttgaagaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggacgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccatcaagaatataattggcaaactcaaacccctcaacatcctaaacattttggcctcatgcgattg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggtcagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagataagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccactaaatcagcctcccctgatattgt +gggcacaataaacgccctgctggctaggatcgccgccgcgcgctccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgtcctgatgatctctggcaaaccagggataggaaagacccacctagccag +agaactggcaaagaaaattgcctcaacactcacaggagaccagagggtgggcctcatcccacggaatggagt +cgatcactgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcagacacatgtccattaactctgaattgtgacaggattgaaaataa +ggggaaagtcttcgatagcgacgcaatcataatcaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgcatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgccctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcatgagagattagatgagtacgagctacagggcc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgagctcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctacggtggcaacacctacacgcttgagtctgacg +gcaagggtaaagttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcgg +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcgctccttc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccagaccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgctagggcaactgaagaagacttctgtgaagaggaagagattaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaacctcggcctcgtcactgggtctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaagtcaggcgaattctgccgcctgagattcccaaaacccatc +aggacagatgtgtcaggcatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +gtggtgggcggccagatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggcagtgagggcgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcttaggccccgggaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcgtatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtgggcacccccac +cacgtgcgcaaaaacgagcactggaacggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcatatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaagataaagaagagattgctttggggctccgatctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaaacccactgtgtgactcttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcattatgatgcagattat +t-ccaggtgggattcaacacaacagagagccgttctggccgcggccatggaaattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggacctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttcaatcaatgaggggttaccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaaattacagacctctctcctgacattgtgcaggccaactctctcttc +tccttttatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggtctcaaacctactcgtccagacaaaactgaggggcccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcggggtggtttggcaagctggatcaaagttcc +atacttaggcaactgtactggaccaaaggtcccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaggcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattactatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactctccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgattttcagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaacagccctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttactctcttgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtctcgcaggggatgtgctcagcaatgggctc +agttcattaattaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttctcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacaatcaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacagtttctagggc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgtgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggtaa-------- +---a-a-att----------ta---------------------------t-ttaaaat--------gaattg +-------a-----tcct---acctt----------------------------------------------- +------------------------------------------------------------------------ +- +>LC122856.1/1-7536 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P2-GII.2/HO-15 +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcaccctcaaacgag----cccttggggcccggcccaaacagccg-gccccgggggaaaaaccccca +aga---------------------ccccctagaccaccaacgccagaattagtc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +gcctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactgggactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +attaggcgtgcacaagccaccagctgccattagcatagccaaagtggaattaacgcccctttcactgtattg +gagacctgtgtacacgcctc---aataccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggcttcttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgtttac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattttggcctcatgcgattg +gaccttcgctggcatagtggagtcactaatcctcatggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatctcggagcctacggattagagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggtcagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagataagaacagccttgcagccta +catgaagaccttggacatggaagaagagaaagctaggaagttatccaccaaatcagcctcccctgatattgt +gggcacaataaatgccctgctggccaggatcgccgccgcgcgctccttggtccatagggccaaggaggagct +ctccagcagaccaagaccggtcgttctaatgatctctggtaaaccagggataggaaagacccacctggccag +agaactggcaaagaaaattgcctcgacactcacaggggaccagagggtgggcctcatcccacggaacggagt +cgaccactgggacgcctacaaaggcgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcactgaggttgcaggaactggcagacacatgtccattaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagtgacgcgatcataatcactaccaacttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactagttgcgcgtgcctctggtctcctgcatgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacactatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacattataatcagaaagtgccagatagtctatagtggtaacacctacacgcttgagtccgacg +gcaagggtaaggttgtggttgagagggtgcagagcacaagcgtgcaaattaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagggtaaggtattatgtcaagtgtgtccaagaggccatttactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattagccgaagatgcagatga--------ggccaccatgaaagaggggtgccccaaacctagg-- +-gaa----gaggagg---agtttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaaggtctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaacggcaagtactccatagaggaatacctacaagacagagacaaatat---t +atgaagaggtggccattgctagggcaactgaagaagacttctgcgaagaggaagaggttaagattcgtcaga +ggatcttcagaccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcactgggtctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaagccccaccaagtatttggtctagaattgtcaactttggttctggatggg +gattttgggtttcac-ctagcctcttcataacatcaacacatgttatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaagtcaggcgagttttgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggcatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccatgcgaccatgagaatacaaggacgc +gtggtaggcggccagatgggaatgttgctcactggatctaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctacatttacaaaaggggcaacgattacatagtcattggagttcacacggctgcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatactaggccccggaaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcgtatctgggaggaaaagacccc +cgagtcaagggtggaccatctctgcaacaagttatgcgagaccaactgaaaacattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtggatacccccat +cacgtgcgcaaaaacgaacactggaacggggagtctttcacaggaaaattggctgaccaggcatcaaaagca +aatctaatgtttgaagaggggaaacacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaatataaagaaaagactgctttggggctccgatctggccaccatggtgcggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattttcag +cagaaccacagct-agcccaaatagttgcagaggacctattgtcgcctagcgtggttgacgtgggcgacttt +aagatttcaatcaatgaagggttaccgtcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgatattgtgcaagccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaaactgacggggaaattg +agagaatatggcctcaaacccactcgtccagacaagactgagggacccctgatcattagtgaggatctgaat +ggtctgactttcctgaggaggaccgtcactcgcgatcctgcaggatggtttggtaagctggaccaaagctcc +atacttaggcaattgtactggaccaaaggccccaatcatgaagacccttttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaggcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +agatggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttcccccatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaacaatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgcagggttttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccctaatgaaatcgtatcagtgcagtgtca +aaatggtaggtgcacattggacggtgagctccaagggacaactcaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tgtataat----------------- +----------------gtcactatcacaaatttgaatgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtatcatctcccaaa---gggacaa--------- +-----ac-----acaatagtcctggacacaatg----aaccagc----aaacaggggacacgatgctgtggt +tcctacttacacagcacagtacactccaaaattgggtcagatccaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttgcag +gctcaaattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttctcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaagaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------catagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctctcaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttgggaccctatatgc---atggtgccttacagacagcctttgtcaccccaccatctagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ca---------------------------t-ttaggat--------gaactg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122857.1/1-7551 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P22-GII.5/TO-20 +-------ggggaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtaattcac----aaccaagatgtaaactctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgctcccagggttccttccccca +acagggagggaagacatgaaaccactcctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggagaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccggctgccataagctttgcacgcatagaactcactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgtt +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgcttaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatattatgtaaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcggtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacacaccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactgatcacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccacccagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtccttcaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagtactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtagtaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgttagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgttctaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttaggcacaacccaactacaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtgctcagccaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcggtttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttattttagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaatagacaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaaccgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattag---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122858.1/1-7496 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P22-GII.5/TO-76 +------------------------------------------------------------------aacagt +gcaattcac----aaccaagatgtaaattctacatctagc------------------ctctttgctaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgcccccagggttccttccccca +atagggagggaaaacatgaaaccactcctagagctccccccccgaacaagggaggaaa--ggctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaaa +tataccaaac----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagagctcactcccctctctctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaaactccatggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---caggaaatttgtgtcaaggaccacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccgtcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggagttgtggaggctctcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggacatcgcggttga +agtcgtaccggtaatcctcggcggtataggcatggtacttggattcaccaaagaaagaattggccgattgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcactgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccaggattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggatgcatataaaggagagaggattgtactctgggatgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgtcccctaacactcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcattaccaccaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggataaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcatcgcccgcgccacgggcctcctacacgaaagattggatgaattcgacctgcagggac +ccgagttgcccgtgtacaattttgaccataacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaggcgtcaaaactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacgactcgatggcttacgacctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccaaaccaacaacgagctcaattccgcac +tcaacaatctgcgcggcgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaaggatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaagca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggtaagaaca +agagcggcagaggcaagaaacacaccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactctatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtctttcgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggcagtgaaa +taaagaagaggaacccagacgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagactttgaagcgcctcccagcctttggtcccgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccctaaagctata +agacctgatgtctcaggcatgatccttgaagaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcaggggccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaaaactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcctacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagccaccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttacgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtctttcactggtgtgttagctgaccaagcttccaaggca +aacctcatgtttgaacaagggaaacacatgcaacctgtgtacactgctgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaatttgccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggactcaacccaacagagacatatcttgggggctgcccttgaaataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtgtctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aaaatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttctcactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaactaaccaacaagttg +aaagagtatggactgatcccaacaagaccagacaagacagaggggccactcatagtcaaagagaaccttgat +ggcttgaccttcctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcagtcctca +atcatgagacaattgttttggaccaaggggcccaaccatgatgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagctttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaggaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgttagaagcaccctttttcactt +caatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgttctaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccctcccctgaatttgatttcacatactt +ggtgccgccaacagtggaatcaaagaccaagccattcacactacctgtgctgacactgggagaactgtccaa +ctctaga---ttccctctctctatcgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgctccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaac-----------------ccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccactcttccctggag +agcgtctccttttcttccgctcttatgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggagtctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggctacttcagatt +tgattcctgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataagcaa--- +------------------------------ttgcaacaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcactagattggagtggc +actaggtactgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagcgccagctctgtgtcttct--------- +----------ggtagg-------accaattt------tacaaattctactcaatcaact---------gttg +ttagcacttcctcagtgc--------------------------------cac------------------c +ttctaggggttcttctgctccttccactctgtcaagggccacaactagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------atggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattaa---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122859.1/1-7545 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P22-GII.5/YA-21 +-----tgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaaaaccagcacaaacagt +gcaattcac----aaccaagatgtaaattccacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgcccccagggttccttccccca +atggggagggaaaacatgaaaccactcctagagctccccccccgaacaagggaggaaa--ggctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaaa +tataccaaac----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtagagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagagctcactcccctctctctatactg +gagaacagtctacactccac---cttacctgatagccccagagaccctaaggaaactccatggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---caggaaatttgtgtcaaggaccacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggagttgtggaggctctcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggacattgcggttga +agtcgtaccggtaatcctcggcggtataggcatggtacttggattcaccaaagaaagaattggccgattgct +gagttctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggacgctgt +tcttgactttgaagccatacagaacaatcacatgacagcactgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccaggattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggatgcatataaaggagagaggattgtactctgggatgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgtcccctaacactcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcattaccaccaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggataaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcatcgcccgcgccacgggcctcctacacgaaagattggatgaattcgacctgcagggac +tcgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaggcgtcaaaactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgacctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccaaaccaacaacgagctcaattccgcac +tcaacaatctgcgcggcgccagagtgagatactatgttaaatgtgttcaagagatggtgtattccctccttc +aaattgctggcgcagccttcgtcacttcaaggatgacacggagattga------acgtcagcagcatttggg +ccagaccaga------------aaagca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggtaagaaca +agagcggtagaggcaagaaacacaccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactctatagaagaataccttcaggatagggatcggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaagaagaaataaaaatcagacaga +gggtctttcgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggtagtgaaa +taaggaagaggaacccagacgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +ataatgagaaaatagactttgaagcgcctcccagcctttggtcccgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcaggtacaagtacataggagtggagagttctgtaaaatgaggttccctaaaactata +agacctgatgtctcaggcatgatccttgaagaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccagatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcaggggccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaaaactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcctacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagccaccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttacgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtctttcactggtgtgttagctgaccaagcttccaaggca +aacctcatgtttgaacaagggaaacacatgcaacctgtgtacactgctgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaatttgccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggactcaacccaacagagacatatcttgggggctgcccttgaaataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtgtctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aaaatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttctcactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaactaaccaacaagttg +aaagagtatggactgatcccaacaagaccagacaagacagaggggccactcatagtcaaagagaaccttgat +ggcttgaccttcctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcagtcctca +atcatgagacaattgttttggaccaaggggcccaaccatgatgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagctttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaggaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctctagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgttagaagcaccctttttcactt +caatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgttctaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccttcccctgaatttgatttcacatactt +ggtgccgccaacagtggaatcaaagaccaagccattcacactacctgtgctgacactgggagaactgtccaa +ctctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgctccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacatatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtacccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaac-----------------ccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggctccactcttccctggag +agcgtctccttttcttccgctcttatgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggagtctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggctacttcagatt +tgattcctgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataagcaa--- +------------------------------ttgcaacaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcactagattggagtggc +actaggtactgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagcgccagctctgtgtcttct--------- +----------ggtagg-------accaattt------tacaaattctactcaatcaact---------gttg +ttagcacttcctcagtgc--------------------------------cac------------------c +ttctaggggttcttctgctccttccactctgtcaagggccacaactagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------atggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattaa---- +-----------tgat------------------------------------tgataat------t------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122860.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/AO-12 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122861.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-38 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatataccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaagtggccaacgcgatcctctgtgcacttggctcactgttctc +aaggccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaaaagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +ctcaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttggaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcaccctccccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcagc---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaataatcacttagcccccgctgtgacaccactctttcctggtg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcagattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122862.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-41 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccgacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgatacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacattgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacgctacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaaattg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctgtgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaagaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttc +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagacataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgtcctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtccatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttactatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122863.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-42 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tactgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgatacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacattgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaaattg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcagggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaagaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttc +attatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagacataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgtcctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtccatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttcctc------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacattgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttactatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgcctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122864.1/1-7519 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/EH-64 +--------------at---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +cccccttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcagcaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122865.1/1-7504 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-39 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgatacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtgtagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggcatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccatacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgtcctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgctctggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122866.1/1-7503 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-40 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacactgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgatacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaagtttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacccgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgtcctcagagtctcagagatgacaaa +ttcaagg---ttccctgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacatcccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tccaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttccc---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122867.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/OS-102 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttgatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccctgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcgttccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaaatatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagattaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaagcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ttacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122868.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/OS-107 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaccaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +ctcaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgtttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagttcga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcggtggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcccacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcgttgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtgggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122869.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/HO-47 +----ggcaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------cgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggccgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcctcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaaaccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgacgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggcagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcaacccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaaaacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------acc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---gtcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------gtctaacaccgtgt---------ccacaaagac +ctccac-------------------tct--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122870.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/KA-20 +----ctgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttacgatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcttcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaagacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtacccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatat +aatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatacccctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggctcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +tagtgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcggaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122871.1/1-7516 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/MI-37 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccttacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaaaaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagacatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaaaatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcaggaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtcctttactggtccccttgcagatcaggcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagatcaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggccccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctgggttagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaaga---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122872.1/1-7484 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/EH-22 +----------------------------c-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgtaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtgaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcgtcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcgagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaggtccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgcccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttctggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgaaacccttcacagagcccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattctgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttcccctcacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------caccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122873.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/TO-2 +----------gaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------cgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggccgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttggaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagaattgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaaaccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacaggtctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggtaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagagtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgccggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaacttaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaaaacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttactatctat-----------atc +tggttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122874.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/EH-65 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagaaat +gtttagtagaatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +gcatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagttggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagtcgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggactttcctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaactttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtgcaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agatccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcttactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtctctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaatcc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122875.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P7-GII.14/EH-62 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcatatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggacgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccctggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagagccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttttaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagaccaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctgcttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggctcgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcgagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgctacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgagaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccacctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacgaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122876.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2010/GII.P7-GII.14/OS-2 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccaggaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccactaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttctaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgggtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccacgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttcttcagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcgagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggaactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgactttaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122877.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P7-GII.14/HO-45 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tactgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctggtaggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaagcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagatctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctagtcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggtcagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacataattgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcgagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacactctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctaccacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatacccctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +agtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caacgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtggatagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttagatt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122878.1/1-7508 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.14/OS-106 +----------------------------c-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +acctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccttacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgagttacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacagtcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggcacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggagagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggtacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcaccttttt +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaggc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacctggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ca---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaag +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgctccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctgt-----------atc +tagttctt-----------ctagtgtacatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122879.1/1-7521 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.14/HO-46 +------------agat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgttgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actttttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgctgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttgggcaaacttaagccattgaacctgctacacttgcttgcgtcgtgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactacgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagtcctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagacctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcttgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggagttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctataaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagacggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagagcaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaatccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagtttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagtttacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacctggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgaagcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggtttatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgccttccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaaactttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122880.1/1-7517 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P7-GII.14/EH-63 +---------------t---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aattctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccactaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcctggaacaggaaacccct +cccaaccgttgatgatggaaaaatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaatcaaagatttgttaggcaaacttaaaccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctggggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctccttaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctgcataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctatagaggagagagggtggtcttgtgggacgactacggtatggggagccctgtaaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggcaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcgtcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttttctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaggaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacaccgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctaggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggagggaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttc +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcatcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgctcctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatctgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacgggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcctg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcgtcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacctaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122881.1/1-7515 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P7-GII.14/HI-13 +---------------------cgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcagcgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcctccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatacatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaaaccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgtgattg +gacgtttgcaggtgtagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggaaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcgtggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaagcgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggagaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggatt +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacgacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgaggcccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgatcactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +accatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagacgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggctcttcttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggtgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatggtagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------acctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122882.1/1-7510 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P7-GII.14/HI-15 +--------------------------aac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccgcttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------ggggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggaacatagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgtatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcttgcgattg +gacgtttgcaggtatagtggagacagtcatcttgatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagctaggaaactgtccactaagtcatcctcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttctaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaaggaatggaaagtactctattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcccaaagggattaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggttcagattcccaaggccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcaggtgtccacaccgcagca +gcccgaggaggcaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagactaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcacaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggaatccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagcgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaatcttgaccccatgaagttaacacagaaactc +agagagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagctcatggcccttcttggtgaggcttcactgcatggtccccaattttacaagaaaatc +agcaaaatggttgtcaatgagattaagagtggtggtctggaattttacgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaataatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtcccgcctacagttgagtctaaaactaagaatttcaccctccccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaagttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcatcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggtt---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ca-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122883.1/1-7516 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P7-GII.14/EH-61 +-------------------ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccaggaccaccggcttcttcaaaccttatcaatcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +atcatccgccgcatcaacactgcgggcatgcaaggacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatccctcctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactgcaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacttggtcaaccccgcgccccttgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccagaagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggtctgccatcaggggtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagttcggcctggtccccacccgacctgataaaactgaaggtcctctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgcacgagagcatggtccctcattcc +cagcgggccacacagcttatggctcttcttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggagttttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agagcttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggctaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaattct +atttgctgccatcccccctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagacataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctaccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +cagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaatacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122884.1/1-7521 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P7-GII.14/HO-43 +------------agat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgtatttccagaaccaccggcttcttcaaaccttatcaatcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctagacatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactctaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttataagaactccaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtgcttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +ataatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggagccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcgtccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacctttcacagaacccagggga +aaaccgcccagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatatgcagcccgtgtacacggccgcactcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttc +atcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattcc +cagcgggccacacagcttatggctcttcttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cctaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +caatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaatctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaatcctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +agctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacgtttgcttcccaaggcatta-a +aa-----------gttccccccacctgtt-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttatcatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcaaaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122885.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P7-GII.14/HO-44 +----attggaaggggt---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgagcatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaatttttccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcaagcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctggggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaactttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtgaagaccttggaagatctaaaatttg +cactaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgagaacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgaggc-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccggatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggcgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaccccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtcccctagcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaaggggacctaaccacgagaacccgtacgagagcatggtccctcattcc +cagcgagccacacagcttatggctctccttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---cggtaaaatcct +atttgctgccatcccgcctagctttccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccgtgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgttaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttggcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--atggtgctatggactgcttgctgccccaagagtgggtggagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcattaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagattaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacttgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122886.1/1-7534 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.7/EH-56 +--------------at---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggcacc-------------aaagcaccc +agcagtga----------------tcaacattgccccacagttaagatcgggcctaaaactttaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattgggctgccggacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +ccctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---actacttggtctccccagacacattaaagggtctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +cccaactgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctattaggcaaactcaagccattgaatctactacacttgctcgcgtcctgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctggtaggtgattttgaattgcaaggtcctgaagacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaactggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctagaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatactagcaaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcagaccagtggtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcggactcgttccacgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactatggtatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgcccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcctctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagatttccctggccagcctgacatgtggaaagatcattttaagccagacttttcccacattaagctga +ctctagccccccagggtgggtttgataaaaacggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctaactgcgagagttgcaggccttgtccatgagaggagagacgagttccagctccaaggaa +atgacctccaaacatacaattttgacaccaacagagtctccgcatttaggaaattggctgcagacaacaagt +atgggatcatggagacgatgagagttggtgcggcgctcaagagtgtaaaaaccttggaagatcttaaagttg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtaccgaatctcttccaacg +gtaaaggctcagtttctgttgacaaagttgagaacaatgcatcccagactgtgaacgaggtacattcagcac +ttctcagactcaggcaagcgagggccagatactacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggagaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcccaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgagaccgctat---t +acgaagaagtagcagttgctcgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcctagtcaccggctcagaca +tcagaaagaggagaccagacgacttccaaccaaaaggcaatctatgggcagatgacaccagaagtgtggact +ataatgagaggctcgattttgaagcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggaactcttt +ggagttgaaatcaaacaaatccaagtccataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagagggcactgtctgttctgtactcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggccct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgtcatatgtgccacccaagggcaagatggggaagcagtccttgaggggaatgag +gaccttggcacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggtacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggcccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagaggc +aaaccacctagacctgcggtcttagaggaagccaaaaagacagtgatgaacgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaacggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggcttctatgggggtcagaccttggcacgatgattaggtgc +gccagggcttttggtggtctcatggacagtatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atactgactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttacggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaaattaacacaaaaactc +agggagtatggtctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactgtactggacgagggggcctaaccacgagaacccgtacgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgttgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccccagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctatctagctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatctgtcaccttcacaaattacgatgtgccctcatgt +tataattgatgttagacaattagaaccagtcctactacctatgccagatatcagaaataatttcttccatta +taaccagggtaatgat---ccaaaattgagattggtggctatgctttataccccattaagggctaataattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +agttccccctacggttgaatccaagaccaagcagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtaccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggaagagtcacacttgatggcgagctattgggcaccacacccttgttggctgtcaacatttgcaagtt +caagg-----------------------------------------gagaggttatagcaaa---------- +----------gaatggagatgt-----------------------------------gagatcctacag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacaccgatggcaccccaattgaccccacagaagacacacctgg +ccccattggttcacctgattttcaaggcatactctttggcgttgcgagccagc---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaagattt---cgaggtgcaccagcccacag---------------------------tcttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccacccttttagacaatgggtcctgcctcg +atacggtggacat-ctgacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctgttctttagatcacaaataccta------gctcaggcggcca------tgaac--------- +--tgggttacatggactgcctcgtcccacaagaatgggtccaacacttctatcaagaagctgccacggctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcataa +gcaaggcttcataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcacttgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctggtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataacaaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gctcaaattgaagccactaaacgtctacaacaagagatgattgacataaaacaaggggtgctgacagctgcg +gggttctctcctacagatgccgcaaggggttccgtcggcgcgccgatgacaaaattagttgattggagtggc +actagatattgggcacctggtgccatgaggacaacaggctattcagggacctttactcacttgccccctatg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagacccttctcctcc---------------- +---ttctt-----------cgagtgt------------ttcctctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagtac-------------------a--------------------aggacgtctgattgggtgcgcagcca +aaatgagaggttgagccccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcgtca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acctccgtaggcgaggggagtcaca--------gacttag--t-----------gaaaagattg-------- +-------gtt-aggaaagtttgattagtttatttttcttttc------ca-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122887.1/1-7543 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.7/EH-57 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaataacactaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgt----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgta +cagtttgatg----------taaagtcagaaactataattgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaacccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgttagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgattgagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---caggagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggtggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagacctggcattggaaagacccacatggcgag +acatttggccaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgatcactgggatgcctacaggggagagagggtggtcctgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagcgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcggagtctccagaaattgaaaaggtca +agagagacttccctggccagcccgacatgtggaaagaccacttcaagccagacttctcccacatcaagctga +ccctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgtgtctcttccaacg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtgaacgaggtacagtcagcac +ttctcaggctcaggcaagcaagggccagatattacatcagctgcttccaagacctcgtctacaccctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggttaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaggaaaggaacggaaagtactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccagccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctacctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggagggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcaatccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagctgagacccttcacagaacccaggggc +aaactacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtctttcactggaccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcactcaaagatgagctcgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gctagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtaatgg-tgcacttctctg +ctgaaccggaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccttatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctactacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacattgcccatccttaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctgttaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcactaacactgatggcaccccaattgaccccacagaagacacacctgg +ccccattggttcacctgactttcaaggtatactctttggcgttgctagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggatcaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-cttacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcatactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctatcaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctgacagctgcg +ggattttctcctacagatgccgcgaggggctctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttacttacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +ccaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ctaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgagaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctgcgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122888.1/1-7467 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2012/GII.P7-GII.7/EH-58 +------------------------------------------------------------------------ +-------------------------accccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgt----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgta +cagtttgatg----------taaagtcagaaactataattgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaacccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgttagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgattgagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---caggagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggtggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagacctggcattggaaagacccacatggcgag +acatttggccaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgatcactgggatgcctacaggggagagagggtggtcctgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagcgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcggagtctccagaaattgaaaaggtca +agagagacttccctggccagcccgacatgtggaaagaccacttcaagccagacttctcccacatcaagctga +ccctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgtgtctcttccaacg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtgaacgaggtacagtcagcac +ttctcaggctcaggcaagcaagggccagatattacatcagctgcttccaagacctcgtctacaccctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggttaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaggaaaggaacggaaagtactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccagccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctacctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggagggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcaatccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagctgagacccttcacagaacccaggggc +aaactacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtctttcactggaccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcactcaaagatgagctcgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gctagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtaatgg-tgcacttctctg +ctgaaccggaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccttatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctactacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacattgcccatccttaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctgttaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcactaacactgatggcaccccaattgaccccacagaagacacacctgg +ccccattggttcacctgactttcaaggtatactctttggcgttgctagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggatcaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-cttacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcatactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctatcaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctgacagctgcg +ggattttctcctacagatgccgcgaggggctctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttacttacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +ccaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ctaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgagaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctgcgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122889.1/1-7524 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.7/OS-66 +--------------------------aac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaataacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacccaagggcacc-------------aaagcaccc +agcagtgt----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgta +cagtttgatg----------taaagtcagaaactataattgggttgccagacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgttagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gagacccgtttataccccta---attacttggtctccccggacacattgaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaatgcgatcctctgcgctctcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaacttaagccattgaacctactgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgtt +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaggctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaagctgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgccagatcccttttacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagacctggcattggaaagacccacatggcgag +acatttggccaagagcatcgccaacaccatgagcggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgatacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtttatgcagagtcaccagaaattgaaaagatca +agagagacttccctggccagcctgacatgtggaaagaccattttaagccagacttctcccacatcaagctga +ccctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctctgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagaccttaaaattg +cattgagggacgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgtgtctcttccaacg +gtaaaggttcagtctctgttgataaagtcgaggacaatgcatcccagactgtgaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgaattca +agagaatcagggaggaaaggaacggaaaatactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaggcgcccccgagtgtctggtcgagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagtagaaatcaaacaaatccaagttcacaaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggagggcgccccagaaggcactgtttgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggccct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtcctcgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagctgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgcgcctcactggacaaaaccacctctagtggtagcccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcggatcaggcgtctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctctcccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttccgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagtcagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaggtatcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgaaaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttataagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataataga +tccctggattagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttagagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccctcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagactggtagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggttccccctacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacactcgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctacag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaataagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taatactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacat-ctcacc------aacaacacccatttggctccagcagtggcccccctatttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcatactggtgacaacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaacgggcgcagg---------ag +gatcc---------aataatggctagtgcttttcttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctggcagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactaccctttcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122890.1/1-7533 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2006/GII.P7-GII.7/SA-79 +--------------at---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcgat +g------ac----agtaacaacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtatataccccca---attatttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaacgatacgtggct +caa---cagaagatgcatttccagaactaccggcttcttcaaaccatatcagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctgttaggcaaactcaagccactgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcagaacttttt---aatgtcttctggaccccgcc +agatgtttctaattttatggcctccttgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgttcccgtggttatgggtggtataggaatggttctcggttttaccgctgagaagataggccgcatgct +atcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaacaaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggacctagaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +tggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaagagat +gttcagcaggattagaccagtggtcgttatgatctcaggcagaccaggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtttatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaggaccattttaagccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccagggatccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +gtgacctccaaacatacaactttgacaccaacagagtctccgcattcagaaaactggctgcagacaacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatctcaaagtcg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctattgacaaagttgaggacaatgcatcccagactgcgaacgaggtacaatcagcac +ttctcaggctcaggcaggcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggctcaaagta---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccaagtgtttggtcaagaatagtcccattaggcactggatggg +gattctgggtttcat-ccaaccttctgatcacaacaacacatgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccctacatctacaaacgtggcaatgacattgttgtcgcgggtgtccatactgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaagatggggaagcagtccttgagggaagtgag +gaccttggcacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctaggaggcaaagacccc +agagtggaaaaagggccctccctgcagcaagtcatgagagaccagttgagacccttcacggaacccagaggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcttgtgcctcactggacaagaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaacggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaagaggataaagaagaggctcctatgggggtcggaccttggcacaatgatcagatgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagtcaacttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttc +tcattttatggggacgatgagatcgtcagtactgatatcaacctcgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagatctcacc +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggttggtttggaaaattagaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +caacgggccacacagctcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagagagtt +agcaagatggtcattaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgcccccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctatcttgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaacttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagtcctattacctatgccagatattagaaataacttcttccatta +caatcagggcaacgat---ccaaaattgaggttggtagctatgctctacacccctttaagagctaataattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +agttccccctacggttgaatccaaaaccaagcagtttacattgcccatccttaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagttgaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgaactgttaggcaccacacccttgttggctgtcaacatctgcaagtt +caagg-----------------------------------------gagaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +gtatggtggacat-ctcacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctattctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctacacaa +acagggttttataactgtggctcacactggtgataacccaattgtcatgccaccgaatgggtactttagatt +tgaagcctgggttaatcaattttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgttgacagccgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggtgccatgaggacaacaggctattcagggacttttacccacttaccccctatg +ca-----------gtctgctccacatgtta-----------aca---------------------------a +tcaaaaca--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ctctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------ag +cgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagtac-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtacgtaacgccaccatccagtag +ggcatcg---agtg------------------------------tcagcg---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcttttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122891.1/1-7518 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.6/MI-27 +-------------------ggcgtctaat-gacgctaccactgcctttggcagccaa---aattctgtcaat +g------ac----agttttaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactactccatatacgtcagcggtggcaaagc +cctaggggttcataggccccctgcggcaataagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccggacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccacaccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttaggcaaacttaaaccattgaacttgttgcacttactcgcgtcatgtgattg +gacgtttgcgggcatagtggagacagttatcctaatggcagaacttttc---aacatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatctcacaaccctcctcaaagataaggatagcctcacggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcgtcctcgccagacatcgt +tggtactatcaatgccatactggccagaatagctgctgccagatccctcctgcacaaggctaaggaagaaat +gtttagtagaatcagacctgtggttgttatgatctcaggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaatcgagaaggtta +agagagatttccccggccaacctgatatgtggaaggaccactttaagccagatttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggtaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggaatcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctgttgacaaagttgagggccaaacatcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcgtctacactctaatgc +aggttgccggagcatcattcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagagatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcacaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaggaatacctgcaagatcgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +ggatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggctcagaca +tcaggaagaggagaccagatgatttccaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggtactggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccaaatgggaatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaataccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacctactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaggtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacagccgctctcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgcagggtaggaatg +aacatgaacgaagatggtcccatcatatttgacaaacactctaagtacaggtatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaagtggtcgcagaggaccttctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtatcaggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcactgacataaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggcccccacccggcctgacaaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattggaccaggactca +atccttaggcagttatactggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaggcctcactgcatggcccccagttctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgactgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaacttaacccttacctaagccatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttttgcccctccctgacataaggaacaggttctttcatta +caatcaggaggatacc---ccccggatgaggcttgtggcaatgctttatactcccctgagggc---taattc +tggtgaagatgtgtttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgagggggttgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcaaactaattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattagagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +aacccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----tc---aagtgggg---------gcaacc--------cga-----------gctcatgaggtgcacat +taacacgaccgatcccaggtatacaccaaaactgggatccatcctcat---gt---------actcagagtc +gctagactt---tgagactggacagccggtcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgattggcaccagtgggagctgcctga +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------tgggt--------- +--ctggacagatagactgcctcatgccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaactgcatag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtatttcaggtt +tgaagcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttagcaaccaagcagttacagcaggagatgatgaacataagacagggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctctccttcctctgtttcttcac----------------- +---------------------agtcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ctagatc----a---tccag-------------------gtccactaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---acggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcc-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122892.1/1-7534 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P7-GII.6/EH-54 +------------agat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcggggctaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttctc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcttaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggttatgggtggtgtaggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattacgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagagtcgactttctggtctacgcagagtcaccagaaattgaaaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagggacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagcgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttcaaatg +gcaaaggttctgtctctgtcgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgtttccaagatctcgtctatacactaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccaaagggcaatctgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctggtcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcaccgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgagaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcagtgaaatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgtggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggcaaggacccc +agagtggaaaaaggaccatcactgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgtcctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaaaaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatccacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgagtgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggtcaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaactgggcccagaactcaacccttacctaagtcacctgtcccgcatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaatatcagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctaccccttcctgacataaggaacaggttctttcatta +caatcaggagaatacc---ccccggatgagacttgtggctatgctttacacccccttgagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgactttgaatttactttctt +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccagg---ttcccagccccaatagatatgttgtacactgacccaagtgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgaatggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgcttttccgggcg +agagaattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaacggcgtt +ggatctctaataaatgctgg---ggctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctctcccgcagatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtctcctgctccttctcagcatactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccatctccacat---------ccacagcgac +ccccgc-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctcttcaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttttcttt---t---ctctc- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122893.1/1-7532 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P7-GII.6/HO-37 +---------------------cgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcggggccaaaacattaacagtccc +ccc-----------------------------tgagcccccaaatgg------tgaggac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacaatagagctcacacccatatctctttattg +gaggcccgtttacactccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccgaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctccttaaggacaaggatagcctcacggcttt +catgaagactctggacctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggcttgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtgggtttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctga +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgaatgtgagataatttacaggaactctaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaggtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggctacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttagtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaactattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggcctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcggaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggaaggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcgatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacattagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgaggcaacttgaaccagtacttctgccccttcctgacataaggaacaggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctgagggc---caactc +tggtgaagatgtgttcactgtctcttgtagggtcttgacccgtcctgcccctgattttgagtttactttctt +ggtaccaccaactgttgaatcaaagactaaacccttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcagc---gagacgcgtcagggca +-----ac---aagtggga---------gcaacc--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaacctcgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcaatagttccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttggcccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgagtatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgctgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtcccttgctccttcccagcatgctgtttt---------------------------a +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgactctg-----------ctagtgtatatagtttcccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacgtccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgtctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttttcttt---t---ctctct +t------------tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122894.1/1-7542 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P7-GII.6/SA-74 +--------------at---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaaggagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccgaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgagttgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagccgctgccaggtccctcttacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtggatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaaaaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggatcagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcggaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaataacacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgatccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggaaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacattagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagacgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaacctcgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcaatagttccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgagtatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaactaagcagttgcagcaggagatgatgaacataaggcagggggtgctgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtcccttgcttcttcccagcatgctgtttt---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtacatagtttcccttcctctgcttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttttcttt---t---tttttt +t------------tttt-----------tttt---------------------------------------- +------------------------------------------------------------------------ +- +>LC122895.1/1-7534 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2008/GII.P7-GII.6/SA-75 +----gggaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaaggagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacggttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccgaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgagttgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagccgctgccaggtccctcttacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaaaaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggatcagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcggaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgatccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacattagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagacgtgtcagggca +-----ac---aagtggga---------gcgact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaacctcgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcaatagttccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgagtatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaactaagcagttgcagcaggagatgatgaacataaggcagggggtgctgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtcccttgctccttcccagcatgctgtttt---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgcttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttttct--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122896.1/1-7456 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2009/GII.P7-GII.6/HO-38 +------------------------------------------------------------------------ +---------------------------------------agaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agcagtga----------------tcagcactgctccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattaagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttataccccca---actatctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccgaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgttcgcgggtatagtagagacagtcatcctaatggcggagcttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaaaataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccccgtcaa +agatgccctaacactacaagagttggccgacacctgcccagtaactctgaactgtgatagaattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctaa +cccatgggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcatttaggaagttggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagacctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgggtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagttgcttccaagatctcgtctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaacagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggattaaggaacttttt +ggagttgagatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacgggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aacctcggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaactattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaag +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcggaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccgggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggagttctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgatccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattgaatcttgaattgggcccagaactcaacccttacctaagccacctgtcccgtatgtataa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtggaaaacattagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaataggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggcaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagacgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaacctcgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcaatggttccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatccagacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------agtaatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgagtatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgctgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgttaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtcccttgctccttcccagcatgctgtttt---------------------------a +ccaa-------------------agagtggattgaaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacac---------ccacagcgac +ctctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcccc------ct-ttttcttt---t---cgctct +t------------tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122897.1/1-7514 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2011/GII.P7-GII.6/YA-5 +--------------------gcgtctaat-gacgctaccactgcctttggcagtcaa---aactctgtcatt +g------ac----agtatcaacaccgccccttctaataaagaagaggc------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcactc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactccgtgtacgtcagcagtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccttacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +cag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttactcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaactattc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcatagggatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgagcgtgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +cggcactatcaatgccatactggccagaatagctgctgccaggtccctcctacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcatg-ctccagaagggtcgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagatttccccggccaacctgacatgtggaaggaccattttaaaccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgtccatgagaggaaagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagaatgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaattccaaataccgagtctcttccaatg +gtaaaggctctgtctctgttgacaaagttgaggaccaaacgtcccagacttcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagacctcgtctataccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaggaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaagacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgccccacaaagaagcagaggaaggaagaaagaggggtacttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgactttgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaagggaattaaggaacttttt +ggagttgaaatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacaggactcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aatcttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcactaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtatacggccgcactcaaagatgagttagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aatatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggatctcctggcacccagccaactggatgttggcgacttt +gtcatatcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcgatggcagaggtgtcgggcctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtacggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggttcggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaagcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctgttaaatcttgaattgggcccagaactcaacccctacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaacgcgttcacagc---tggaaaaatcat +ctttgccgccgtaccaccgcattttcccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttatacccccttgagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgccctgcccctgattttgaatttactttctt +ggtaccaccaaccgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagacatgttgtatactgacccgaatgagggaattgtggtccaaccaca +aaatggtaggtgtactcttgatggcactctgcaaggtaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacattaattggacaa--------- +----------acgtcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------accaccca----------------- +----------ctccatgtgcaattgaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcagggca +-----ac---aaatggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactgggcagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgcttttccgggcg +agaggattctcttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggccaaattgcacag +ggaaggtttcattaccgtggcaaattctggtaacaatcccattgttgttccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctccccctcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttactcagg-acagttttctagcagccctgtcca +ca-----------agtcccctgctccttctcagcatactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtgtatagtttcccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------ta +ccgggtc----t---tccag-------------------gtccatctccacat---------ccacagcgac +ccccac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcttttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------c----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122898.1/1-7536 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.6/HI-29 +-------------gat---ggcgtctaat-gacgctaccactgcctttggcagccaa---agctctgtcaat +g------ac----agtactaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaagggaacc-------------aaagcaccc +agtaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttaaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatgccagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctgcttgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctgatggcggaacttttc---aacatcttttggacaccgcc +agacgtttccagcttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggctgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccacctcacaaccctcctcaaggacaaggacagccttacggcctt +catgaagactctggatctagaagaggagaaggcaaggaaactgtctaccaagtcatcctcgccagatattgt +cggcactattaatgccatactggccagaatagctgctgccaggtcccttttacataaggctaaagaagaaat +gtttagtaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgatcagagagtagggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +gggaaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctacgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgagatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagttccagctccagggga +acgaccttcaaacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttagaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gcaaaggctccgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tttctaaaaggttctgct +gggagagatgggttaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagtggcccaaggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagccttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtagact +acaacgagagactcgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcacaagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcttccatgaaaatacagggtagg +actgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttatatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggcaaagaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagttttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaaaaccacttccagcggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatctcggtacaatgatcagatgt +gccagggccttcggcggtctcatggacagcatgaaggcaagttgcttagccctcccatgcagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattctatagcacattgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagctcactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agggaatatggcctggtccccactcgacctgacaaaactgagggtcctctcgtaataactgaggacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgagccagtacttctgccccttcctgacataaggaacaggttctttcatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctctacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +agtgccaccaactgttgaatcaaagactaaacctttcacattgcccatattaactcttggtgagctatctaa +ctcaagg---ttcccagccccaatagatatgttgtatactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggtaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtgggg---------gcaact--------cga-----------gctcacgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccgatcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgattggcaccaatgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaagattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgttgcaaattctggcaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accagatattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttctcagcacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatacagctttccttcctctgtttcctcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgcagacgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttttcttt---t---ctctct +t------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122899.1/1-7527 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-34 +--------------------------aat-gacgctaccactgcctttggcagccaa---agctctgtcaat +g------ac----agtactaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaagggaacc-------------aaagcaccc +agtaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttaaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatgccagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctgcttgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctgatggcggaacttttc---aacatcttttggacaccgcc +agacgtttccagcttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggctgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccacctcacaaccctcctcaaggacaaggacagccttacggcctt +catgaagactctggatctagaagaggagaaggcaaggaaactgtccaccaagtcatcctcgccagatattgt +cggcactattaatgccatactggccagaatagctgctgccaggtcccttttacataaggctaaagaagaaat +gtttagtaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgatcagagagtagggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +gggaaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctacgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggaccattttaagtcagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgagatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagttccagctccagggga +acgaccttcaaacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttagaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gcagaggctccgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tttctaaaaggttctgct +gggagagatgggttaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagtggcccaaggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagccttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtagact +acaacgagagactcgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcacaagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcttccatgaaaatacagggtagg +actgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttatatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggcaaagaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagttttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaaaaccacttccagcggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatctcggtacaatgatcagatgt +gccagggccttcggcggtctcatggacagcatgaaggcaagttgcttagccctcccatgcagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattctatagcacattgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagctcactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agggaatatggcctggtccccactcgacctgacaaaactgagggtcctctcgtaataactgaggacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgagggtgtgaatgag +gatggcgtcgaatgacgctgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgagccagtacttctgccccttcctgacataaggaacaggttctttcatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctctacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +agtgccaccaactgttgaatcaaagactaaacctttcacattgcccatattaactcttggtgagctatctaa +ctcaagg---ttcccagccccaatagatatgttgtatactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggtaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtgggg---------gcaact--------cga-----------gctcacgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattatcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccgatcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgattggcaccaatgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaagattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgttgcaaattctggcaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accagatattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttctcagcacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatacagctttccttcctctgtttcctcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgcagacgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-atgt--------------------tttctcc------ct-ttttcttt---t---ctctct +t------------tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122900.1/1-7512 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-33 +---------------------------------gctaccactgcctttggcagccaa---agctctgtcaat +g------ac----agtactaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaagggaacc-------------aaagcaccc +agtaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttaaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatgccagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctgcttgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctgatggcggaacttttc---aacatcttttggacaccgcc +agacgtttccagcttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggctgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccacctcacaaccctcctcaaggacaaggacagccttacggcctt +catgaagactctggatctagaagaggagaaggcaaggaaactgtccaccaagtcatcctcgccagatattgt +cggcactattaatgccatactggccagaatagctgctgccaggtcccttttacataaggctaaagaagaaat +gtttagtaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgatcagagagtagggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +gggaaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctacgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgagatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagatgagttccagctccagggga +acgaccttcaaacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttagaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gcaaaggctccgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tttctaaaaggttctgct +gggagagatgggttaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagtggcccaaggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagccttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtagact +acaacgagagactcgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcacaagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcttccatgaaaatacagggtagg +actgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttatatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggcaaagaccct +agagtggaaagaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagttttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaaaaccacttccagcggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatctcggtacaatgatcagatgt +gccagggccttcggcggtctcatggacagcatgaaggcaagttgcttagccctcccatgcagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattctatagcacattgg +atcctgaccttgagcgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagctcactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agggaatatggcctggtccccactcgacctgacaaaactgagggtcctctcgtaataactgaggacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaggactca +atcctcagacagttgtattggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagagtagaggccatgttc +agatggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgagccagtacttctgccccttcctgacataaggaacaggttctttcatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctctacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtgccaccaactgttgaatcaaagactaaacctttcacattgcccatattaactcttggtgagctatctaa +ctcaagg---ttcccagccccaatagatatgttgtatactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaactaaaggaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtgggg---------gcaact--------cga-----------gctcacgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactgggatccattctcat---gc---------actcagagtc +agacgactt---tgtgactggacagccgatcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgattggcaccaatgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaagattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgttgcaaattctggcaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accagatattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttctcagcacactgcttt---------------------------g +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatacagctttccttcctctgtttcctcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcaa-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------cat--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgcagacgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-tttttctt---t--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122901.1/1-7463 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.6/MI-28 +------------------------------------------gcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcggttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaggagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcggtccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcatacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +ttaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggttaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggtcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------ggcaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gattta--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122902.1/1-7542 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/KA-16 +------------agat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagaccatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcgagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaga +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacaggactcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcgaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgatccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aagttaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122903.1/1-7535 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-35 +---------------------cgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgaccattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccccatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---ggtgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgaggg----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctgggaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacaa--- +------------------------------ctccaatcggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagcatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cgag--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122904.1/1-7505 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-37 +--------------at---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcggttaagatcggggccaagacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgaaaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgtaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgacgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagaccttgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gctcggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattctcaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaga---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctacttcaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122905.1/1-7535 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-38 +---------------------cgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgaaaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgttgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgtaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgacgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagaccttgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gctcggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattctcaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaga---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctacttcaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122906.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-39 +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgaaaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgtaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgacgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagaccttgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gctcggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattctcaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcgattctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaga---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ca-----------ggcaacctacttcaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122907.1/1-7542 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/KA-17 +------------agat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgcgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagtaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacgctacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccctggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaattagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccactccgatagacatgttgtacactgaccccaatgaggcaattgtggtacaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tattgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcat-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcagggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagtaaccctgtgca +ta-----------ggcaacctacttcaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122908.1/1-7537 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/MI-29 +-------------------ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacattgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcgtggaacaggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgccgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccactttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaacgttctagagcaaaccattgac +cctgctaaaccgtggtcctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagctctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctt +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tattgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtattttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttc---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122909.1/1-7478 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/EH-18 +--------------------------------------cactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagat------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggtacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggtccacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tgtgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgccgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagtatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgcttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctt +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggcaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tattgattt---tgatgatggacaacccaccc---------------------------gctttatcccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacaccggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatggtgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgatgggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagatt--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122910.1/1-7543 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/EH-19 +------gaatgaggat---ggcgtctagc-gacgctaccactgcctttggcagtcaa---gactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgtttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaagaggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +ataacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcaggttcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +actgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagactacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggctatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---tcccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggac +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggcccttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatacgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggattttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgttctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggc--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122911.1/1-7507 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HO-39 +--------------at---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgcgggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacgatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtttgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaacgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acatttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgtcaaagttgaggaccaaacatcccaggccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctatgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcaggttcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgctgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccagg---ttccccgctccgatagacatgttgtatactgaccccaatgaggcaattgtggtgcaaccaca +aaatggtaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--actcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcaggtcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttctccagcaaccctgtgca +ta-----------ggcaacttactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagagggca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcaaggggagtcaca--------gatttag--t-----------gaagagattg-------- +-------gtt-aggt--------------------g------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122912.1/1-7521 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/HI-36 +----------------------------c-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaaattggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtacgggggttaccagacttgacaacggt---gcagaa +tgagcacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgtatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccgcgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacccgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacttcccagactgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagttgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgattcccctggcagtgaggatgggcacgcatgcaaccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggtaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagtcacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +atcgtctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgtcgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaaatggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggccac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccctatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccatgacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------t-------------t-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122913.1/1-7477 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/SH-6 +----------------------gtctagc-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaataccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgatatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatctacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagata +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +aggcctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcgtgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcatactctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggtgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccattcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaatccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtaccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctttagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccactc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------t +ttaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------g-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122914.1/1-7531 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2014/GII.P7-GII.6/SH-5 +-------------------------taac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatccctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccattgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactgat +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccgcagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatcttaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatctacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaataccttcaagatcgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatcccactggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaagacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggataagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccagagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgataagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccagctagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggttcctcattcc +cagcgggccacacaacttatggccctactcggtgaggcttcactgcatggtccccagttttacaagaaagtc +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccactaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtacaa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +agtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggagcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgagatct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--cgggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ctaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctacatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgttacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122915.1/1-7534 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.6/HI-28 +----------------------gtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaggaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttctttaaaccataccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggtaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgtcccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggcccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcagaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgaggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgtcgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtgagacagcttgagccagtgcttttgcccctccccgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgatgatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgaggg----------------accaccct----------------- +----------ctccacgtccagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagtcgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacacttacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgccgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggcactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgccccttcac----------------- +---------------------aatcaactca---ctcaacggctctgactg-------cggg--------gt +ctagctc----a---tctag-------------------gataacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctagaactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcctca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122916.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2013/GII.P7-GII.6/EH-55 +----------------------gtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggataccggatttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctagcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacattacaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaaggattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaaggattgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaggtcg +ccttgagagatgtaaagtttaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggtaaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatattccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggggtacttggcttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccgttgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaatccaaattcacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggcgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccttccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaactcgttaag +actgataagatctacaagaagataaagaagagacttctgtgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcagaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcgcaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccctctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaagacacc---ccccggatgaggcttgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgccatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgctgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgattagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatttaacag--- +--attccccccag--------agagcccgta----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaagggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggcgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtccatagtaccat------cggctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atccgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------agagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-ctttttcc---t--tcccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122917.1/1-7551 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2005/GII.P7-GII.6/HO-35 +-------------------ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggcacattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcctaggggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaagtcggaaactgtaattgggctaccggacttgacaacagt---acaaaa +tgagcatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgctgaagggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaatcaaggacctgttgggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggagctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgtatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacttagggaactacgcccttgacatacttaaattagt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcagaccagtggttgtcatgatctcaggcagacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgcccagtcactctaaattgtgataggattgagaacaa +ggggaaaatgttcgacagtgatgtcatcattattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagattttcctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgataccaacagggtctctgcgttcaggaaattggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtatctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaacctcctgatcacgacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaaatcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgcaactcaagggcaagatggggaggcagtccttgaaggaaacgaa +aaccttggcacttactgtggtgccccaattttgggccctggcaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtagggatccc +agagtggaaaaagggccctccctacagcaagttatgagagaccagctgaaacccttcacagaacccaggggc +aaaccacctagaccagcagttttagaagaagctaagaagacagtgatgaatgttctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaggatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtatcactacgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggtccactcgtcataactgaagacctcact +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagctacccagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtaagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---cctcggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccggtccagattttgagttcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcccaacgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacaacacaattggttccaacacagatttgtgcctt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctcggggctattgacttcaaaggtacaatattcggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------ataattggagacagtgggaattgcctga +ttattctggtaga-ttgact------ttaaacatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcctgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttgcaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcta +ca-----------ggtctcctgctcccccccagcatactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattttg-----------ctagtgtgtatagctccccctccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccctacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggctcagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctgtgt------------tcaacacacataggcagcctctcttcgccc +atttgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-ctttttcc---t-cctccttt +t------------ctct-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122918.1/1-7543 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2005/GII.P7-GII.6/YA-17 +---------------------cgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtacattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcctaagggcact-------------aaagcaccc +agcagtga----------------tcagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaagtcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcataaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccctacacagccttcagcaacaattgctacaatttctgttgctgggtgctcgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggtttcttcaaaccgtaccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaggtcaaaaaggtggccaacgcgatcctctgtgcacttggctcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgtatgct +gtcatccgctgcatcaacactgcgggcgtgcaaagacttagggaactatgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagatagtctcacggcctt +catgaagaccctggatttagaagaagagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcagaccagtggttgtcatgatctcaggcagacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccacgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +ggggaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagacgaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcacggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtttctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaatg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtatctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagttca +aaagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaggccaagataagacaaa +gaatcttccgtccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ccaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaaatcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcttccatgaaaatacagggtagg +accgtcggtggccagatggggatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgcaactcaagggcaagatggggaggcagtccttgaaggaaatgaa +aaccttggcacttactgtggtgccccaattttgggccctggcaaagcgcctaaacttagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtagggatccc +agagtggagaaagggccctccctacagcaagttatgagggaccagctgaaacccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgtcctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttattggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgcagggtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtatcactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggccttacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagctacccagctcatggccctccttggtgaggcttcattgcatggtccccagttctacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggggcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaagaaattcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccccgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgccgctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---cctcggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagttcacattttt +agttccaccaactgttgaatcaaaaacaaaacccttcactctacctatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcccaatgagtcaatagttgttcagcccca +aaatggtaggtgcactctcgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgattagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgatacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caacacaaatcaacccatta---------------------------ggtttactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ttattctggtaga-ttgact------ttaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +cgaggcttgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgctacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaaacaagggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcatactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccctctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacacaggcagcctctcttcgccc +atttgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-ctttttcc---t-cctccttt +t------------ct--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122919.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P7-GII.6/HO-33 +--------------at---ggcgtctaac-gacgctaccactgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaga----tgctgggtgccgtgcctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtcccacggttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actata +cagtttgatg----------caaagtcagaaactataagtgggctgccggacttgacaacagt---gcaaaa +tgaacatgagaacaccccatacaccgtccctccattgagtgagagggaacttagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggcggcaaagc +tctaggggttcacaagcccccggcagctataagcctcgcgacaatagagctcacccccatatctctatactg +gagacccgtttacaccccta---actacctagtctgcccagacacactgaaaggccttgctggtgagaagtt +cccctacactgccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaatgacacgtggct +cag---cagaagaagcatctccagaaccaccggcttcttcaaaccataccagtcttggaataggaagcctct +cccaaccgttgatgatgggaaaatcaaaaaggtggccaacgcgatcctctgtgcactaggctcgctgttctc +aaagccaattaaagacctgttaggcaaactcaaaccattgaacttgctacacttgcttgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggactccgcc +agatgtttctaatttcatagcctccctgataggtgattttgaactgcagggacctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtatagggatggttctcggcttcaccgctgagaaaataggtcgtatgct +gtcgtctgctgcgtcaacattgcgggcgtgcaaagacctagggaactatgcccttgacattcttaaattggt +catgaagtggttcttcccaaagaaagaggagaaggctgagatggaaaccttgagggcgattgaggatgccgt +tctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaggacagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcaccatcaacgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcagcaggatcagaccagtggttgtcatgatctcaggcagacctggtattggcaaaacccatatggcaag +acatttggctaaaagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagaaagggtggtcttgtgggatgattatggcatggggaatcctgtcaa +agatgctctgacattacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +gggaaagatgttcgacagtgatgtcattataattacaaccaatctagttaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctccagaagaatcgacttcctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggactattttaaacaagacttctcccacataaaactaa +ccctagccccccagggcggatttgacaaaaatggtaataccccgcatggtaagggcactatgcggtccctca +cccaggggtccctgactgcaagagttgcaggccttgttcatgagaggaaggatgagttccagctacaaggaa +acgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcggcgctcaaaaatgtcaagactttggaagatttgaaagccg +ccttgagagatgtaaaattcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaacgaggtgagctcagcac +tcctcagactcagacaggcaagggccagatattatatcagctgctttcaagacctcgtctacactctcatac +aggttgctggggcatcatttgttgtca---------------acagaa------tctccagaaggttctgct +gggaaaggtgggtgaaaccaaccgagac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatcgagcccaaggacacagagccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagccttctccagcaaaggtctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcgacagaagaggacttttgtgaagaggaagaggccaagataagacaaa +gaatcttccgtccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttggtcactggctcagata +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgatactaggagtgtagact +acaatgagagacttgacttcgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gtttctgggtttcat-ctaacctccttattacaacaacgcacgtcctgcccaaggggatcaaggaactcttt +ggagttgaaatcaaacaaatccaaattcataagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacaggactcgtgctggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgagggggcaacactgttatatgtgccactcaagggcaagatggggaggcagtccttgaaggaaatgaa +aaccttggtacttactgtggtgccccaattttgggccctggcaaagcgcctaaactcagcacaaagactaaa +ttttggcgctcatcaccagatgccctacctcctggcacatatgaacctgcctacctggggggtaaggacccc +agagtggaaaaagggccctccctgcagcaagttatgagagaccagttgaagcccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaacgtcttggaacaaaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggtagcccccac +catgtcaagaaaaatgatcactggaatggggagtctttcactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacacgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcggaccttggtacgatgatcaggtgt +gccagggcttttggtggcctcatggacagtatgaaagcaagttgcatagccctcccatgcagggtggggatg +aacatgaacgaggatggccctatcatatttgacaaacactccaagtataggtatcactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctccgccgctatggaggtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcacctagccagctagatgttggcgatttt +accatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagtgcaatggcagaagtgtcaggtctctcaccagatgttgttcaagcccactcctgcttt +tcattttatggcgatgatgagattgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccgacctgataagactgagggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctgcgtaggtcgatcgcacgggatccagctgggtggtttggaaaattggatcaagactca +attctcaggcaattatactggacaaggggacccaatcatgagaacccatacgagagcatggttccccattct +cagcgagccacacagctcatggcccttcttggtgaggcttcactgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggcggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgagtgacgccgctccatcgaa---cgatggcgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtagtgggagcctcaatcgcagctcctgttgtcggccagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaaccttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtaccaccacatttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagttcacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaactcttggtgagctgtccaa +ctcccgt---tttcccgctgctatagatatgctttacactgatcccaatgaatcaatagtcgttcagcccca +aaatggtaggtgcactcttgatggcacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtaccctgatcagccaa--------- +----------accgcgagggcg------gc----------------------------cgacttaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggtacacagtatgacccaacagatgacatacctgc +agtcctgggggctattgacttcaaaggtacagtgtttggagtagctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccactatgccacc--------cga-----------gcccatgaggcacacat +tgacacaaatgatccaaagtatgcacccaaattaggcacaatccttat---ca---------aatctgaatc +tagtgattt---caatacgaatcaacccatta---------------------------ggttcactccag- +--------tgggtatgggtgaca---------------------acaattggagacagtgggaattacctga +ttactctggtagc-ctgact------ttaaacatgaaccttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcatacctcaggaatgggtgcaacacttctaccaggaagcggcgccttcaca +atccgctgtcgcactggttaggtatgtcaatcccgacactgggcgtaacatctttgaggccaagttgcacag +agaaggattcctcaccgtggccaaccctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccagttttacacacttgcccccatgggatctggacaggggcgtaga---------ag +agccc---------agtaatggctggagccttcttcgcaggattagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgatttcaataagcaa--- +------------------------------cttcaaatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaacaaaacagttgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaagatactggactggaatggc +acaagatactgggcacctaacagcatgaaaactacaagctattcagg-acagttctccagtagccccgttca +ca-----------ggtctcctgctccttcccagcacactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattcta-----------ctagtgtgtatagctccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ccgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +agctgttttgga-ctcctggacccctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-ctttttct---t-cccccttt +t------------ctc-------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122920.1/1-7563 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P7-GII.6/HO-34 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgccccacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataagtgggctaccggacttgacaacagt---gcaaaa +tgagcacgaaaacaccccatacactgtccctccattaagtgagagggaacacaggccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggcggcaaagc +tctaggggttcataaacccccggcagctataagcctcgcgacgatagagctcacccccatatctttatactg +gaggcccgtttacaccccca---actacctagtctgcccagatacactgaaaggtctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgatgatggaaaagtcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaattaaagacctgttaggcaagctcaaaccattgaacttgctacacttgctcgcgtcatgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggactccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggctgtgga +gcttgttcccgtggtcatgggtggtataggaatggttcttggcttcaccgctgagaagataggtcgcatgct +atcgtccgctgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggctatagggaacaaccatctcacgaccctcctcaaggataaggacagtctcacggcttt +catgaagaccctggacctggaagaggagaaggcgaggaagctatctaccaaatcatcctcgccggacatcgt +cggcactatcaacgccatactggccagaatagctgccgccagatccctcctgcacaaggccaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccccgcaacggagt +cgaccactgggacgcctacaggggggagagagtggtcttatgggacgactatggcatgggaaaccccgtcaa +agatgctttaacactacaagaattggctgacacatgtccagtcactctaaattgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatctagttaatcctgcacctctcgattatgt +aaacttcgaggcgtg-ctctagaagagttgacttcttggtctatgcagagtcaccagaaattgaaaaagtta +agagagacttccctggtcaacctgacatgtggaaagatcacttcaaacaagacttttcccacataaagctga +ctctagcccctcagggcggatttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctaa +ctcaagggtccctgactgcgagagttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgaccttcaaacatacaactttgacactaacagggtctccgcattcaggaagctggccgcagacaacaagt +atgggatcgtggaaacgatgagagtgggtgcggcactcaagaacgttaagactttggaagatctgaaagttg +ccttgagggatgtgaaattcaatgagtgtgagataatctacaggaactccaagtatcgagtctcttccaacg +gtaagggctctgttactgttgacagagttgaggatcacacatcccagactgcaaacgaggtgagctcagcac +tcctcagactcagacaggcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggtcgctggggcatccttcgttgtta---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtaaaaccaaccgagac-------------ccaagaagcgagtgagcccga-----aaagg +aagtggcccaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacatacagctttctccagcaaaggcctgagtgatgaagagtatgacgagttca +agaggatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtagcagttgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgtccgacaaggaaacagagaaaggaggaaaggggggtgcttggattggtcactggctcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacaccaggagtgtagact +acaatgagagacttgacttcgaggccccaccaagcgtctggtcaagaatagtcccattgggtactggttggg +gtttctgggtttcat-ccaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggagttgagatcaaacaaatccaagttcacaagtctggagagttttgcagattcagattcccaagaccaatc +aggccagatgttacggggctcgtgttggaggaaggcgctccagaaggcactgtctgttctatactcataaag +agacctacgggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgccactcaagggcaagatggagaggcagtccttgaaggaaatgaa +aaccttggtacttactgtggtgccccaattttgggccctggcaaggcgcctaagctcagcacgaagaccaag +ttttggcgctcatcaccagatgccctacctcctggcacatacgaacctgcttacctgggaggtaaggacccc +agagtagaaaaagggccctccctgcagcaagtcatgagagaccagctgaaacccttcacagagcccaggggc +aagccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctggaacaaaccattgac +cctgctaagccatggacctactcgcaagcatgtgcttcgctggataagaccacttctagtggtagcccccac +cataccaggaaaaatgaccattggaatggagagtctttcactggtccccttgcggatcaggcatctaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaaaaagataaagaagaggcttctttgggggtcggaccttggtacgatgatcaggtgc +gccagggcttttggcggcctcatggacagtatgaaagcaagttgcatagcccttccatgcagggtggggatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtataggtaccactatgatgctgactac +t-ctagatgggattcaacccagcaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctccg +ctgaaccagaatt-ggcacaagtggtcgcagaggatcttttggcacctagccagctagatgttggcgatttt +gtcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +attctaactctgagcgcaatggcagaagtatcaggtctttcaccagatgttgttcaagcccactcctgcttt +tcattttatggcgatgatgagatcgttagcactgacataaaccttgaccccatgaaactgacacagaaactc +agggagtacggtctggtccccacccgacctgacaaaactgaaggccccctcgtcataactgaagacctcacc +ggcctgacgttcctgcgtaggtcgattgcacgggatccagctgggtggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagccacacagctcatggcccttcttggtgaggcttcattgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtaggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcgccaaggaattcgcccgg +tgagatgcttttaaaccttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +taatcaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcccctgagggc---taattc +tggtgaggacgtgttcactgtgtcttgtagggttctgacccgccccggtccagattttgagttcacattctt +agtaccaccaactgttgaatcaaaaacaaaaccttttaccctacctattctaactcttggtgagttatctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcctaatgaatcaatagttgttcaacccca +aaatggtaggtgcactcttgatggcacgttgcaaggtacaacacaattggttccaacacaaatttgtgcttt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcagtag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacagtatgacccaacagatgatatacctgc +agtcctgggggctattgacttcaaaggtacagtgtttggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattacgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccgaagtatgcacccaaattaggcacaatccttat---ca---------aatctgattc +cagtgattt---taacacaaatcaacccatta---------------------------ggttcaccccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattacctga +ttattctggtaga-ttaacc------ttaaatatgaaccttgcccccgctgtttccccatcttttcctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaagcagcaccttcaca +atccgccgtcgcactggttaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagtcccccctaatggttattttagatt +tgaggcttgggttaatcaattttacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaagcatgataaggagatgttacaa +tcacaggtgctggcaaccaaacagctacagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcagatgctgctagaggggctgttaatgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagtatgaaaaccacaagctattcagg-acagttttctagtagccccgtcca +ca-----------ggtctcctgctcctccccagcatactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtacagcttcccctccactgtttcttcac----------------- +---------------------aatcaaccca---ttcaacaatgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgttcatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtacccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacatagacagcctctcttcgccc +atttgcgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttc------cc-ctttttct---t-tctccttc +t------------ctct-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122921.1/1-7548 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P7-GII.6/TO-52 +--------------------gcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgccccacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataagtgggctaccggacttgacaacagt---gcaaaa +tgagcacgaaaacaccccatacactgtccctccattaagtgagagggaacacaggccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggcggcaaagc +tctaggggttcataaacccccggcagctataagcctcgcgacgatagagctcacccccatatctttatactg +gaggcccgtttacaccccca---actacctagtctgcccagatacactgaaaggtctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgatgatggaaaagtcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaattaaagacctgttaggcaagctcaaaccattgaacttgctacacttgctcgcgtcatgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggactccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcagggacctgaggacttggctgtgga +gcttgtccccgtggtcatgggtggtataggaatggttcttggcttcaccgctgagaagataggtcgcatgct +atcgtccgctgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggctatagggaacaatcatctcacgaccctcctcaaggataaggacagtctcacggcttt +catgaagaccctggacctggaagaggagaaggcgaggaaactatctaccaaatcatcctcgccggacatcgt +cggcactatcaacgccatactggccagaatagctgccgccagatccctcctgcacaaggccaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccccgcaacggagt +cgaccactgggacgcctacaggggagagagagtggtcttatgggacgactatggcatgggaaaccccgtcaa +agatgctttaacactacaagaattggctgacacatgtccagtcactctaaattgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatctagttaatcctgcacctctcgattatgt +aaacttcgaggcgtg-ctctagaagagttgacttcttggtctatgcagagtcaccagaaattgaaaaagtta +agagagacttccctggtcaacctgacatgtggaaagatcacttcaaacaagacttttcccacataaagctga +ctctagcccctcagggcggatttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctaa +ctcaagggtccctgactgcgagagttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgaccttcaaacatacaactttgacactaacagggtctccgcattcaggaagctggccgcagacaacaagt +atgggatcgtggaaacgatgagagtgggtgcggcactcaagaacgttaagactttggaagatctgaaagttg +ccttgagggatgtaaaattcaatgagtgtgaaataatctacaggaactccaagtatcgagtctcttccaacg +gtaagggctctgttactgttgacagagttgaggatcacacatcccagactgcaaacgaggtgagctcagcac +tcctcagactcagacaggcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggtcgctggggcatccttcgttgtta---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtaaaaccaaccgagac-------------ccaagaagcgagtgagcccga-----aaagg +aagtggcccaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaagagtatgacgagttca +agaggatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtagcagttgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgtccgacaaggaaacagagaaaggaggaaaggggggtgcttggattggtcactggctcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacaccaggagtgtagact +ataatgagagacttgacttcgaggccccaccaagcgtctggtcaagaatagtcccattaggtactggttggg +gtttctgggtttcat-ccaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggagttgagatcaaacaaatccaagttcacaagtctggagagttttgcagattcagattcccaagaccaatc +aggccagatgttacggggctcgtgttggaggaaggcgctccagaaggcactgtctgttctatactcataaag +agacctacgggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaatactgttatatgtgccactcaagggcaagatggagaggcagtccttgaaggaaatgaa +aaccttggtacttactgtggtgccccaattttgggccctggcaaggcgcctaagctcagcacgaagaccaag +ttttggcgctcatcaccagatgccctacctcctggcacatacgaacctgcttacctgggaggtaaggacccc +agagtagaaaaagggccctccctgcagcaagtcatgagagaccagctgaaacccttcacagagcccaggggc +aagccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctggaacaaaccattgac +cctgctaagccatggacctactcgcaagcatgtgcttcgctggataagaccacttctagtggtagcccccac +cataccaggaaaaatgaccattggaatggagagtctttcactggtccccttgcggatcaggcatctaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaaaaagataaagaagaggcttctttgggggtcggaccttggtacgatggtcaggtgc +gccagggcttttggcggcctcatggacagtatgaaagcaagttgcatagcccttccatgcagggtggggatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtataggtaccactatgatgctgactac +t-ctagatgggattcaacccagcaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctccg +ctgagccagaatt-ggcacaagtggtcgcagaggatcttttggcacctagccagctagatgttggcgatttt +gtcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +attctaactctgagcgcaatggcagaagtatcaggtctttcaccagatgttgttcaagcccactcctgcttt +tcattttatggcgatgatgagatcgttagcactgacataaaccttgaccccatgaaactgacacagaaactc +agggagtacggtctggtccccacccgacctgacaaaactgaaggccccctcgtcataactgaagacctcacc +ggcctgacgttcctgcgtaggtcgattgcacgggatccagctgggtggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagccacacagctcatggcccttcttggtgaggcttcattgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtaggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcgccaaggaattcgcccgg +tgagatgcttttaaaccttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaataggttcttccatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgctctacacgcccctgagggc---taattc +tggtgaggacgtgttcactgtgtcttgtagggttctgacccgccccggtccagattttgagttcacattctt +agtaccaccaactgttgaatcaaaaacaaaaccttttaccctacctattctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcaacccca +aaatggtaggtgcactcttgatggcacgttgcaaggtacaacacaattggttccaacacaaatttgtgcttt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcagtag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacagtatgacccaacagatgatatacctgc +agtcctgggggctattgacttcaaaggtacagtgtttggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattacgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccgaagtatgcacccaaattaggcacaatccttat---ca---------aatctgattc +cagtgattt---taacacaaatcaacccatta---------------------------ggttcaccccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattacctga +ttattctggtaga-ttaacc------ttaaatatgaaccttgcccccgctgtttccccatcttttcctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaagcagcaccttcaca +atccgccgtcgcactggttaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagtcccccctaatggttattttagatt +tgaggcttgggttaatcaatttttcacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaagcatgataaggagatgttacaa +tcacaggtgctggcaaccaaacagctacagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcagatgctgctagaggggctgttaatgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagtatgaaaaccacaagctattcagg-acagttttctagtagccccgtcca +ca-----------ggtctcctgctcctccccagcatactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccctccactgtttcttcac----------------- +---------------------aatcaaccca---ttcaacaatgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgttcatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtacccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacatagacagcctctcttcgccc +atttgcgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttc------cc-ctttttct---t-tctccttc +t------------ctct-----cg------------------------------------------------ +------------------------------------------------------------------------ +- +>LC122922.1/1-7558 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P7-GII.6/TO-53 +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgccccacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------atcgta +cagtttgatg----------caaagtcagaaactgtaagtgggctaccggacttgacaacagt---gcaaaa +tgagcacgaaaacaccccatacactgtccctccattaagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggacggtgaattctaccactattccgtgtacgtcagcggcggcaaagc +tctaggggttcataaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacttggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccataccaatcttggaacaggaagcctct +tccaaccgttgatgatggaaaagtcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaattaaagacctgttaggcaagctcaaaccattgaacttgctacacttgctcgcgtcatgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggactccgcc +agatgtctctaattttatagcctcccttataggtgattttgaattgcagggacctgaggacttggctgtgga +gcttgttcccgtggtcatgggtggtataggaatggttcttggcttcaccgctgagaagataggtcgtatgct +atcgtccgctgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggctatagggaacaaccatctcacgaccctcctcaaggataaggacagtctcacggcctt +catgaagaccctggacctggaagaggagaaggcgaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaacgccatactggccagaatagctgccgccagatccctcctgcacaaggccaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccccgcaacggagt +cgaccactgggacgcctacaggggggagagagtggtcttatgggacgactatggcatgggaaaccccgtcaa +agatgctttaacactacaagaattggctgacacatgtccagtcactctaaattgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatctagttaatcctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagagttgacttcttggtctatgcagagtcaccagaaattgaaaaggtta +agagagacttccctggtcaacctgacatgtggaaagatcacttcaaacaagacttttcccacataaagctga +ctctagcccctcagggcggatttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctaa +ctcaagggtccctgactgcgagagttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgaccttcaaacatacaactttgacaccaacagggtctccgctttcaggaagctggccgcagacaacaagt +atggaatcgtggaaacgatgagagtgggtgcggcactcaagaacgttaaaactttggaagatctgaaagctg +ccttgagggatgtaaaattcaatgagtgtgaaataatctacaggaactccaagtatcgagtctcttccaacg +gtaagggctctgttactgttgacaagattgaggatcacacatcccagactgcaaatgaggtgagctcagcac +tcctcagactcagacaggcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggtcgctggggcatccttcgtcgtta---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtaaaaccaaccgagac-------------ccaagaagtgagtgagcccga-----aaagg +aagtggcccaaggta---gatgggagattgagcccaaggacacagaaccagaaggcaagaaaggcaagaaca +agaaaggaagaggcaagaaacatacagctttctccagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtagcagttgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaga +gaatcttccgtccgacaaggaaacagagaaaagaggaaaggggggtgcttggattggttactggctcagata +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcggatgacaccaggagtgtagact +acaatgagagacttgacttcgaggccccaccaagcgtctggtcaagaatagtcccattgggtactggttggg +gtttctgggtttcat-ccaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggagttcttt +ggagttgagatcaaacaaatccaaattcacaagtctggagagttttgcagatttagattcccaagaccaatc +aggccagatgtcacggggcttgtgttggaggaaggtgccccagaaggcactgtctgttccatactcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgcttctcacaggggcaaacgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgaaggaaatgaa +aatcttggtacttactgtggtgccccaattttgggccctggcaaggcgcctaagctcagcacgaagaccaag +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttacctgggaggtaaggacccc +agagtagaaaaagggccctccctgcagcaagtcatgagagaccagctgaaacccttcacagagcccaggggc +aagccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctggaacaaaccattgac +cctgctaagccatggacctactcgcaagcatgtgcttcactggacaagaccacttctagtggtagcccccac +cataccaggaaaaatgaccattggaatggagagtccttcactggtccccttgcggatcaggcatctaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaaaaagataaagaagaggcttctttgggggtcggaccttggtacgatgatcaggtgc +gccagggcttttggcggcctcatggacagtatgaaagcaagttgcatagcccttccatgcagggtggggatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtataggtaccactatgatgctgactac +t-ctagatgggattcaacccagcaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctccg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcacctagccagctagatgttggcgatttt +gtcatcttagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +attctaactctgagcgcaatggcagaagtatcaggtctttcaccagatgttgttcaagcccactcttgcttt +tcattctatggcgatgatgagatcgttagcactgacataaaccttgaccccatgaaactgacacagaaactc +agggagtacggtctggtccccacccgacctgacaaaactgaaggccccctcgtcataactgaagacctcacc +ggcctgacgttcctgcgtaggtcgattgcacgggatccagctgggtggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagccacacagctcatggcccttcttggtgaggcttcattgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggtcatggcacttgaaccggtggcaggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcgccaaggaactcgcccgg +tgagatgctcttaaaccttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcctgttgataatattagtgcagctcagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caatcaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcccctgagggc---caattc +tggtgaggacgtgttcactgtgtcttgcagggttctgacccgccccggtccagattttgagtttacattctt +agtaccaccaactgttgaatcaaaaacaaaaccttttaccctacctattctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcctaatgaatcaatagttgttcaacccca +aaatggcaggtgcactcttgatggcacattgcaaggcacaacacaattggttccaacacaaatttgtgcttt +cagag-----------------------------------------gcaccctaatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcagtag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttgcacgtccaggtcaagaacctagacggcacacagtatgacccaacagatgatatacctgc +agtcctgggggctattgatttcaaaggcacggtatttggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccatcacgccacc--------cga-----------gcccatgaggcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattctcat---ca---------aatctgattc +caatgattt---taacacaaatcagcccatta---------------------------ggttcaccccag- +--------tgggcatgggtgaca---------------------ataattggagacagtgggaattacctga +ttattctggtaga-ttaacc------ttaaacatgaatcttgcccccgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaagcagcaccttcaca +atccgccgttgcactggttaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaataatcctattgtagtcccccctaatggttattttagatt +tgaggcttgggttaatcaattttatacacttgctcccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcaaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaagcatgataaggagatgttacaa +tcacaggtgctggcaaccaaacagctacagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcagacgctgctagaggggctgttaatgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagtatgaaaaccacaagctattcagg-acagttttctagtagccccgtcca +ca-----------ggtctcctgctcctccccagcatactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtacagctccccctctaccgtttcttcac----------------- +---------------------aatcaaccca---ttcaacaatgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atctacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgactgggttagaggaca +gaatgaaaggcttagcccgttcatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +ggcctca---tcaa------------------------------atggga---cggtctcgaccgtacccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacatagacagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttc------cc-ctttctcc---t-tctctctc +t------------ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC122923.1/1-7549 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2004/GII.P6-GII.6/HI-1 +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccaatagagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacact-------------aaagcaccc +agcggaga----------------ccggcactgccccacggttaaggtcgggtccaaaacactggtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtgcgtgggctacccgacctaacgacagt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactaagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggacggtgaattctaccattactccatctacgtcagcggaggcaaagc +cttgggggtgcacaaacccccagcggctataagcctcgcgacagtggagctcactcccatatccctttactg +gcgacctgtctacactccaa---actacctagtccacccagacacactgaagggccttgctggtgaaaagtt +tccctacacagcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccatatcagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcattattttc +aaaaccaatcaaagacctactgggcaaactcaagccactcaacctactgcatctgcttgcgtcgtgtgattg +gacgtttgcaggtatagtagagacagttattttgatggcggaactcttt---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgataggtgatttccagttacaaggacccgaggacttggctgtgga +gctagtccccgtggttatgggaggcataggaatggtcctcggttttactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccctaagggcatgcaaagatctggggaactacgccctggacatactgaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagttgtcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactagctagaatagcagccgctaggtccctcctacacaaggccaaggaagagat +gtttagcagaatcagaccagtagttgtcatgatttcaggtagacctggcattggtaaaacccacatggcaag +gcatctggctaagagcatagccaacacaatgaatggagaccagagagtcgggcttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agacgccttgacactgcaagaactggccgacacctgtccagtcaccttgaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttgatcaaccctgcacctcttgattatgt +gaacttcgaggcttg-ctccagaagaatcgatttccttgtctatgcagagtcaccagaaatagagaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggcaaaggcactatgcgttctctga +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaactttgacaccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atggaatcatggagacaatgagagtgggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttgagagatgtaaaattcaatgaatgtgagatcatctacaagaacaccaagtaccgggtctcatctgatg +gcaaaggcacagtctctgttaacaaagttgaggacctcacttcccaaaccgcaaacgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattacgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggaaagatgggttaaaccgaccgaggc-------------ccaggagacgagtgagcccga-----gaaag +aaactgcccagagtg---agtgggaggttgaacccaaggacacagaaccagagggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaagaccgtgaccgctac---t +acgaagaagtagcagttgcccgggcaacagaggaggacttctgtgaagaggaggaagccaagataaggcaaa +gaatcttccgcccaacaaggaagcaaagaaaagaggaaaggggtgtgctcggcctggtcactggcacggaca +tcaggaagagaagaccggatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgatttcgaggcccctccaagcgtgtggtcgaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaatctcctaatcacaacaacacatgtcctgcctaagggtattaaggaacttttc +ggcgtcgatgtcaaacaaatccaaatccacaaatctggggaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcagg +gctgttggtggccaaatgggtatgctcctcactggggcgaacgcaaagaatatggacctcggcaccggcccg +ggagattgcggttgcccttacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaggggcaggacggggaagcagttctcgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcaaggcgcccaagctcagtacgaagaccaag +ttctggcgctcatcgcctgatgccctgccacccggcacatatgagcctgcctacctaggaggcaaagacccc +agagtagagaagggtccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaagaagacagtaatgaacgtcctggaacagaccatcgac +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagaccacttccagtggcagcccccat +cacatcagaaagaacgaccactggaatggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaaa +actgacaaaatttacaagaagataaagaagaggctcctgtgggggtcggaccttggcacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aatatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgatgctgactac +t-ctaggtgggactcaactcaacaaaggagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacctagccagttggacgttggcgacttt +gtcatctcagttcaggaaggcctgccatcaggagtcccatgcacgtcacaatggaattcaatagcccactgg +atcttgaccttgagtgcgatggcagaagtgtcaggcctttcaccagatgttgtgcaggcccattcctgtttc +tctttctatggtgatgatgagattgtgagtactgacatcaaccttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacgcgacctgacaaaactgaaggccccctggttataactgaggaccttacc +ggcctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagtatggtcccccactcc +cagcgggccacacaactcatggcccttcttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttacgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtacaa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacattttcctgtagagaatattagtgcagctcaaattacaatgtgcccccatgt +gattgttgatgtgagacagcttgaacctgtacttttgcccctccctgacataaggaatagattctttcacta +taaccaggaagacacc---ccccggatgagacttgtagccatgttgtacacacctcttagagc---aaactc +tggtgaggacgtgttcacagtgtcttgcagagtcttgacccgcccagcccctgactttgagtttacgttctt +agtgccaccaaccgtggaatcaaagaccaagcctttcacactccctattttaaccctaggggaactatccaa +ctccaga---ttccctgctccaatagatatgttgtacacagatcccaatgaaacaattgtggtacaaccaca +aaatggcagatgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttaatcagccaa--------- +----------acgtcgaggtca------gc----------------------------agattcaacgg--- +--actcagcccca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtgccagc +agttctgggtgccatagacttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggaa +-----ct---ctgtaggg---------gcgacc--------cgt-----------gcccatgaggtacacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---ga---------attctgagtc +tagtgattt---tgatgatggacaaccaactt---------------------------gcttcactccca- +--------ttggcatgggagcag---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttact------cttaacatgaacctagcccccgcagttgctcctgctttccccggtg +agcgcatcctcttctttaggtcagtggttccat------ctgctggtggtta------cggat--------- +--caggccaaatagactgcctcatcccacaggagtgggttcagcacttctaccaggaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcattactgtggcaaattctggaaataaccccatagttgtgcccccaaatggctatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaattaaccagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaagcatgacaaggaaatgctgcaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaatataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaacggc +acaagatattttgccccaaatagtatgaaaacaactagttattcagg-tcagttctccagtaaccctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgattc---------------------------c +ccaa-------------------aagttaaaattaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctatatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaatgactctaactg-------cagg--------gt +ctggatc----g---tccag-------------------gacaacctcctctc---------ccacagcaac +ttccac-------------------cct--------------atctaggaccagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC122924.1/1-7545 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-59 +---------ggaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122925.1/1-7543 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-61 +-----------aagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122926.1/1-7540 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-63 +--------------at---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgatactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +agggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaatatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122927.1/1-7540 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-71 +--------------at---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgatactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +agggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaatatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122928.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-60 +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagagcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagatcaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcactctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaattctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122929.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-65 +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttgctgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagtccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------tcggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttatcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122930.1/1-7550 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-66 +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttgctgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtata +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccaaggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactcg +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acgagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttgaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatctag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122931.1/1-7538 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-64 +-------------------ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgcgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagcccttccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggtgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggcctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttattttaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcctc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122932.1/1-7538 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-68 +-------------------ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccattgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttttgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcgccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggtaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaaaggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggagaccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagggcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggcacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtaatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagggggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtaaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtacacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatacgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-ccagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------act-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC122933.1/1-7529 |Norovirus GII genomic RNA, polyprotein, strain: Hu/GII/JP/2003/GII.P6-GII.6/TO-62 +--------------------gcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccagtaaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcggtga----------------ccggcactgccccgcagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgacg----------caaaatcagaaactgtacgtgggctacccgacctgacgacggt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgagttctaccattactccatctacgtcagcggaggtaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtacacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccataccagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcgcttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgatgggtgattttcagttacaaggacccgaggacctggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaaccttaagggcatgcaaagatctggggaactacgccctagatatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attagacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +catgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccatatggcaag +gcatctggctaagagtatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccctgacactgcaagaactggccgacacctgcccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttgatcaaccctgcacctctcgattatgt +gaactttgaggcttg-ttccagaaggattgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atgggatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttaagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatccgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaatgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---agtgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaggaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgcccaacaaggaagcaaagaaaagaggaaaggggtgtactcggtctggtcactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggtaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgacttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgttctgcctaagggtgttaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcaga +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcagagcgcccaagctcagcacgaagaccaag +ttctggcgatcatcgcctgatgccctgccacccggtacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgat +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagatcaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaggatgagctcgtcaag +actgacaaaatctacaagaagataaagaagaggctcctgtgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggaagtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagtacaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttaagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttt +tctttctatggtgatgatgagattgtgagcactgacatcaatcttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggtctaacattcctgcgcaggtcgatcgcgcgggaccccgctgggtggtttgggaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgggccacacaactcatggccctccttggtgaagcttcattacacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaacattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagcctgtactcttgcccctccctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacaccccttagagc---aaactc +tggcgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagccttttacactccctattttgaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaatcgtggtacaaccaca +aaatggcaggtgcactctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacagggag +-----ct---ctgtaggg---------gcgacg--------cgt-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------aatctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggttac-cttacc------ctcaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--cgggacaaatagactgcctcatcccacaggaatgggttcagcacttctatcaagaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtacccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagctctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaaatcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaaccca---ttcaacaattctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacaacctcctctt---------ccacagcaac +ttccac-------------------cct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------c---------------------------------------------------------- +------------------------------------------------------------------------ +- +>OM368933.1/1-7497 |Norovirus GII isolate FS159 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgctaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aataccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatctcccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372476.1/1-7548 |Norovirus GII isolate FS161-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaacccttacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaacca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgaacttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>OM372477.1/1-7489 |Norovirus GII isolate FS163 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccattaaggacataatagggaagttgaaacccctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggtatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cgttggctccacaggggggttttgacaagaacggcaacaccccgcacggaaagggaatcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggagacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtacccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacggaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taggtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcataagcgag--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372478.1/1-7515 |Norovirus GII isolate FS167 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccattaaggacataatagggaagttgaaacccctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggtatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cgttggctccacaggggggttttgacaagaacggcaacaccccgcacggaaagggaattatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacggaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atccgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +cgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taggtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcataagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372479.1/1-7501 |Norovirus GII isolate FS168 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------ttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactggccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccaggggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactctaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaacccttacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372480.1/1-7512 |Norovirus GII isolate FS177 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aataccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccacttacaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-attgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372481.1/1-7517 |Norovirus GII isolate FS178 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccattaaggacataatagggaagttgaaacccctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggtatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cgttggctccacaggggggttttgacaagaacggcaacaccccgcacggaaagggaatcatgaagaccctca +ccactggctctctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgagttctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagtggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgacgtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacggaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtggagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtagg---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taggtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcataagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372482.1/1-7509 |Norovirus GII isolate FS181 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttctgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctaatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagctgcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggctag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacaggatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgtcagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaagatcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcctctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcacacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacgactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagggaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcaccctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactagcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacgtgacaccagtgtacacggcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactat +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtatggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttaaac +ggtctcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaattggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtctccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccatttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccccgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtttcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacagctccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactatttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggactacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatag------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +gacatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatta----------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OM372483.1/1-7469 |Norovirus GII isolate FS535 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcctaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccagggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcgaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgtcatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcttggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggcc +ccacaaccaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaagaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagactaataacgagttggctggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------attagagactaaggaagagacccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagttaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaactttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtaagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacgcaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttaggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactaggacaaattcaaattggca---------catggcaaac +tgacgacct---tacaatcaaccagccagtca---------------------------aattcacctcag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggcta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtacagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaacgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtactgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctaaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtgagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatcaattg------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OM372484.1/1-7313 |Norovirus GII isolate FS555 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------cacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +gaatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaattagtaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcactattcac +taggcccatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttaatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaactggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaactaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctagtgcatcgggcgaaagaagaact +ctccagcagaccaagacctgttgttgtcatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtattcgacagtgacgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcatataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctta +ccactggttccctcatcgcccgagcatcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgctcgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggctcgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacaccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtagaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggaaagaaagggaagaaca +agtctggccgtggcaagaaacacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +agatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagagaaacccagacgactttaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtgcccatcaaacaaatccagatacacaaatcaggcgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactggatccaacgccaagagtatggacctgggcaccacacca +ggtgattgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgtggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccaccccaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagtggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgtcagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagagatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaagctgacagcaaagctc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttctgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcaggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggagttgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttgattgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctaggaacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacactacggctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtaaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgttattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagcgcgcggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaagat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtat +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtca------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372485.1/1-7435 |Norovirus GII isolate FS560 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-------------------------------------------------ttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatataagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctatacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtaccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagacggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacctaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctgatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactctt----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372486.1/1-7310 |Norovirus GII isolate FS567 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------ggccgcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctagaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccattaaagacataataggaaaggtgagaccgcttaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtaatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +tatgaaatggttcttcccaaagaaagaggaagcgaatgagctagctatggtgaggtccatcgaggatgcggt +gctggatctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaaatctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggacgcatataagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacgggaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccaccttcaattttgaccgcaacaaggtgcttgcgttcagacaacttgccgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgtcactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggccgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaagctcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagcagcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggcacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgacaccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttggaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggccaactccctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctaactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcaga------gctagtgaccaggccgacacagcaacccctagattgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagatttccagcaatggtccttacccga +ctactctggtcag-ttcacc------cacaacatgaacttagccccagctgttgcccccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgttaaccctgacactggtagagtgctgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacactcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggtgcttttatagcaggattagctggtgacatatttacaaatactgta +gggtctttggttaatgcagg---ggctaatgctattaatcaaaaagttgactttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaaccatgataaggaaatgttgaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttttgaccgcaggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacgacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagagccgcacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtca------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372487.1/1-7421 |Norovirus GII isolate FS598 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-----------------------caaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccgcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtcaggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagagacgccaaggaaccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtgtctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgattcgtggtt +gtg---caggagaatgatccagagaacgactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagtattctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaaatctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgcactcaggttacaggaacttgctgacacctgtccccttacactaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ctactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagtccagaacgtcactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +caaagccacaggtggaggatacagagga--------aatcgctagtaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacagatat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaagctcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtagccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacaccgtcatttgtgccacccaagggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggggcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggtacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcagcaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacgctacctgttagggtgggtatg +aacatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-ctcggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactttctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctatggtgatgatgaaattgtaagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctaaat +ggcctaaccttcctgcggaggaccgtgattcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagcaaaatc +agtaaattggtcattgcagagttgaaggagggtggtatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccatta +caatcaagggtctgat---tcgagattgcacttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacccagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacctttcaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagactgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ctgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcactccag- +--------ttggcattggggttgacca------------tgagtcagacttccagcaatggtccttacccga +ctactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaatcctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataattgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttacacactcgcccccatgggaactgggaatgggcgtaga---------ag +agtac---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaaccatgataaggaaatgttgaat +gcacagattgaggcaaccaagagattacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tggtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagcttttgtcactccaccatccagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtca------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372488.1/1-7512 |Norovirus GII isolate FS695 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacagaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaaggaccagtcatt +aggtatgagg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccactgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactttggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgttgcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctggggatgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggtgggcttatggacgagatgaaggcacactgtatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctactaactctttgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggcctcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattgaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggccatgctttatacccctctcaggtctaatggttc +aggtgacgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttgggctc---------aatgacactgaacac---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatttcc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctgctaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggactacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaacccgc----agcacaagcctctcccaatcaacagtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatggattg------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OM372489.1/1-7436 |Norovirus GII isolate FS696 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------c----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggatgaggccagtagttgttatgatatctggcaagccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaggccggacttttcacacatcaagctac +agcttgcaccccagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcgttcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtccccatcaaacaagttcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaactggctgaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggatcagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttttctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcactatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +tggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgtacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaatatgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattccggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaagtttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agctt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372490.1/1-7477 |Norovirus GII isolate FS744 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------------------tgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacgatggtagcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacatagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaaaccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagaggggaaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatttggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagctgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaagca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------agtgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372595.1/1-7439 |Norovirus GII isolate FS161-1 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------------------------------------------------t------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccgcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtctgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcacggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgatctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaacgcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ctactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgtcactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcagaccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaagctcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacaccgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggcacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccatttactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaataccattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggagaaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagcaaaatc +agtaaattggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagactgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtagagtctttggtgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagacttccagcaatggtccttacccga +ctactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaatcctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacactcgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaaccatgataaggaaatgttgaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctccacaacctcggtgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggctcccagatccacacccagcagtgggtcctcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagcttttgtcactccaccatctagtac +agcctcc---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagt--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372672.1/1-7534 |Norovirus GII isolate FS180 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aataccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatggggggggtaggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacgggctggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-attgat-----ta-----t------ctttc----------t-t-----t-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372676.1/1-7420 |Norovirus GII isolate FS182 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-------------------------------acgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttctgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctaatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagctgcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggctag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacaggatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgtcagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaagatcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcctctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcacacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacgactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagggaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcaccctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactagcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacgtgacaccagtgtacacggcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactat +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtatggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttaaac +ggtctcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaattggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtctccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccatttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccccgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtttcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacagctccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactatttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggactacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatag------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +gacatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcag----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM372682.1/1-7448 |Norovirus GII isolate FS192 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccattaaggacataatagggaagttgaaacccctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggattgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggtatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cgttggctccacaggggggttttgacaagaacggcaacaccccgcacggaaagggaatcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgaaggaggtgat +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacggaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taggtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacg---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373200.1/1-7526 |Norovirus GII isolate FS203 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------cttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtaagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtacaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgatagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgaggttcccgaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctctaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggctcttatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaagccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctggggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctgggaccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaacttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt------------------------------------------------------- +------------------------------------------------------------------------ +- +>OM373201.1/1-7305 |Norovirus GII isolate FS209 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------gcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctagaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccattaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtaatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcgaatgagctagctatggtgaggtccatcgaggatgcggt +gctggatctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggacgcatataagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacgggaacaccccacacgggaaaggcgtcatgaaaaccctca +ctactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgtcactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggccgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaagctcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagcagcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcatccacggcaccactcccacctggcacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgacaccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacattccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggccaactccctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaatcatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctagaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcaga------gctagtgaccaggccgacacagcaacccctagattgttca---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagatttccagcaatggtccttacccga +ctactctggtcag-ttcact------cacaacatgaacttagccccagctgttgcccccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgctgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacactcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaaccatgataaggaaatgttgaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttttgaccgcaggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacgacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagagccgcacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373207.1/1-7444 |Norovirus GII isolate FS236 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +----------------------gcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaggcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggttaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373210.1/1-7460 |Norovirus GII isolate FS241 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +---------------------------atcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aatacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagacgacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctatcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-a-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373317.1/1-7542 |Norovirus GII isolate FS257 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacaccgcatttgataacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccattaaggacataatagggaagttgaaacccctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccaggtatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcga +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cgttggctccacaggggggttttgacaagaacggcaacaccccgcacggaaagggaatcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcactactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttgggaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaggtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgagttctgtcgactgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggggtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacactcgagggaggtgat +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacgctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccgatgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctaacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacggaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atccgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taggtctt-----------ctaat------------tcctctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acatccataagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-t-----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373532.1/1-7497 |Norovirus GII isolate FS273 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------ccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aataccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaatcccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgatagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggtacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373562.1/1-7506 |Norovirus GII isolate FS288 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------ttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaaatgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccgcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtacgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagagtggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagctaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccctaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcctggcaaccta +tatgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcaaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +cgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaaccccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ctactggttccctcattgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagaattggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgtcactgtgcagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgccagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgatt +acaatgagaagctcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +cgaccaactggtgagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcacgtggaggaaacaccgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggcacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgat +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaacttaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccccgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaaattggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagtaaaatc +agtaaattggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctaggatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagactgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagcgaccaggccgacacagcaacccctagactgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccagccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagacttccagcaatggtccttacccga +ctactctggtcag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaatcctgacactggtagagtgttgtttgaggccaagctgcataa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacactcgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatatttacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttgaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcaggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagctttcgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-tta--------------------attt-g--------at-ttaa-attaaatttg------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373624.1/1-7483 |Norovirus GII isolate FS290 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------------------------------ttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagatctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgaatgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagggttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggtaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtg----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373643.1/1-7496 |Norovirus GII isolate FS303 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------tccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagatctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgaatgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggtaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM373654.1/1-7468 |Norovirus GII isolate FS480 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +---------------cgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttataacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtcccccctctcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---aataccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcctattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgatcttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcggggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgtaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaggggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccatttacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacggactgaaaccaacccgtcccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctagcccccgctgtggccccaacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaattggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagccaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctatcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM386670.1/1-7519 |Norovirus GII isolate FS578 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---aaatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cgctcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagtgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctt----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM386672.1/1-7443 |Norovirus GII isolate FS493 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +---------------------------------------------ggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggtact-------------aaagcaccc +agcagtga----------------ccagcactgcccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +caatttgatg----------caaaatcggaaactgtaattgggctaccggacttgacgacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacatagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattttaccactactctgtgtacgtcagcggcggcaaagc +tctgggggtccacaagcctccggcagccataagcctcgcgacgatagagctcacccctatatctctatactg +gaggcctgtttacaccccca---actacctagtctgcccagacacactgaaaggtctcgccggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgttgggtgcttgagcttaatgacacgtggct +tag---caggagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaataggaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactgcatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtagagacagttatcttaatggcagaactcttc---aatgtcttttggaccccgcc +agacgtctctaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggcataggaatggttctcggcttcaccgctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatactcaagttggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagacatggaggccataggtaacaaccacctcacgactctcctcaaggacaaagacagtctcacggcctt +catgaagaccttggacctggaagaagagaaggcaaggaaactgtccaccaaatcatcctcgccggacatcgt +cggcactatcaacgccatactggctaggatagctgccgctagatccctcctgcacaaggccaaagaggagat +gtttagcaggaccagaccagtggttgttatgatctcaggcaggcctggcattggcaaaactcatatggcaag +acatctggctaagaacatcgccaacaccatgagtggtgaccagagagtcgggctcgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaggaacttgctgatacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaagatgttcgatagtgatgtcatcataatcacgaccaacctagtcaatcctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccctggtcaacctgatatgtggaaagactatttcaagcaagatttttcccatataaagctaa +ccctagccccccaaggtggatttgacaagaatggcaacaccccgcacggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggcctcgttcatgagaggaaggatgagttccagttacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcagaaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactctggaggatctgaaagtcg +ccttgagagatgtgaagtttaatgaatgtgaaataatttacaggaactccaagtaccgggtctcttccaacg +gtaagggctctgtttctgttgacaaagttgaggaccacacatctcagaccgcaaatgaagtgggctcagcac +tcctcagactcaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactcttatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccgaccgaaac-------------ccaagaagcgagtgaacccga-----aaagg +aagtggcccaaggaa---ggtgggagatagagcccaaggacacagaaccagagggcaagaagggcaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaagaggaaaggggggtacttggtttagttactggctcagata +tcaggaagaggagaccagatgatttccagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacatgtcctgcccaggggggtcaaggagctcttt +ggggtcgaggtcaaacaaattcaaatccacaagtctggggagttctgtaggtttaggttcccaagaccaatc +agaccagatgtcacaggactcgtgttggaggaaggtgctcctgagggcactgtctgttccatactcgttaag +aggcccacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcactggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaggggcaagatggagaagcagtccttgagggaaatgaa +aaccttggcacctattgtggagctccaattctgggccctggtaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatccccagatgccctacctcctggcacgtatgaacctgcttatctagggggtaaggatccc +agagttgaaaaagggccctctctacaacaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggccaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgttaagaaaaatgaccactggaatggggagtctttcactggtcccctagcggaccaggcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagattaagaagagactcctgtgggggtcagaccttggtacgatgatcaggtgc +gccagggcttttggcggccttatggatagtatgaaagcaagttgtatagccctcccatgcagggtggggatg +aacatgaatgaggatggccccatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-taaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcccagccagctagatgttggcgacttt +gtcatctcagtccaggagggactgccatctggagttccatgtacgtcacagtggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgtagtccaagcccactcctgtttt +tcattttatggtgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaactgacacagaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgcagatcgatcgcacgggatccagctggatggtttggtaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcactgcatggtccccagttttacaagagagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacagtga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagttcactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccgcatttccctgtggataatattagtgcagcccaaataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttttacccctccccgacataaggaacaggttcttccatta +caaccaagaaaacacc---ccccggatgagactggtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcttgcagagttctgactcgccctgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaactcttggtgagttatctaa +ttcccgt---ttccctgctgctatagatatgctttatactgatcccaatgaatcaatagttgtgcagcccca +aaatggtagatgcacccttgatggcacgttgcaaggtacaacacaattggtcccaacacagatttgtgcttt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgta----------------atcaccca----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgatccaacagatgacatccctgc +agtcctgggggccattgacttcaaaggtacagtgttcggagtggcaagccaga---gggacgtctccggaac +-----ac---aagagcagggccattacgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggcacaattcttat---ca---------aatctgagtc +taatgattt---caacacaaatcagcccatta---------------------------ggtttactccag- +--------tgggtatgggtgaca---------------------acaactggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctaaacatgaaccttgcccctgctgtttccccatccttccctggag +aacgaatccttttcttcaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtatgtcaaccccgacaccgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaataatcctattgtggttccccctaatggttattttagatt +tgaagcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgcaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcattaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaacaagcaa--- +------------------------------cttcagatggcatcatttaagcatgataaggagatgttacaa +tcacaggtgttggcaactaaacaactgcagcaggaaatgatgaacataaagcaggggatgttagctgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaagatactggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagctattcagg-acaattctctagcagccccgtcca +ca-----------ggtctcctgctcccctccagcacaccgcctc---------------------------a +ccaa-------------------agagtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttctactgtttctacac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttaggggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggacccctatgt------------tcaatacacataggcagcctctcttcgccc +atctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-ct------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM386792.1/1-7491 |Norovirus GII isolate FS674 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aatggc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcgttcagtgtcccccctctcaaccagagggagaacagagacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---taggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctagcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtaatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgtcgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggccaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcttcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgctagcgttcagacaacttgctgccgaaaacaagt +atggactgctggacacaatgagagttggaaaacagctcaagggtgttaagaccatgtcagagctcaaacagg +cactcaaaaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccacagtgcagaccaacaatgagcttgccggcgcac +tacatcatcttaggtgcgccagaatcagatattatgttaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aattgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacagatat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaga +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaagtcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgct +gcccgtggaggaaacactatcatttgtgccacccaagggagcgagggagaagccacactcgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggcccaggaaatgccccaaaactcagcaccaagactaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggaggcccttcactgcaacaagttatgagggatcaactaaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctggaagctgccaagaagaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagattaaaaagaggcttctctggggttcggatctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatacaaatatcactatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaatctgtcccctgatattattcaggctaactctctcttt +tctttttacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgataaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgttgggtgaggcagcgctccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctag---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctccttaatttggagttgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaacaatttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggagatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccaatgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgcgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattttagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +gttaggttttatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgagtcaacaaagagattacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaagtcctggattggaatgga +acaaggtactgggcaccaaatgccacctctacaacttcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtctgggtcgtctcgatcca--------------g +cgggccta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaacttcaatttggaaccacacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtt--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM386814.1/1-7505 |Norovirus GII isolate FS686 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------ttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaatcccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctgaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaaaaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtacaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatagctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgatagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgaggttcccgaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctctaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggctcttatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaagccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctggggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgagccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tga---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM386843.1/1-7506 |Norovirus GII isolate FS759 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------gctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccactctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggagggataggtttggttctaggatttaccaaagagaagatcggaaagatgct +gtcatcagctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcggt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgcggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaggaggaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctctcagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtactcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcactctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcaggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------c------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OM388564.1/1-7435 |Norovirus GII isolate FS741 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------------------------------------------------------------agc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccgcccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctagaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccattaaagacataataggaaaggtgagaccgcttaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +gctcgtaccagtagtaatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +tatgaaatggttcttcccaaagaaagaggaagcgaatgagctagctatggtgaggtccatcgaggatgcggt +gctggatctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgacctcgaagaggagaaagccaggaagctttcaaccaaatctgcttcacctgacatcgt +gggcacaattaacgccctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggacgcatataagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgtccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacgggaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccaccttcaattttgaccgcaacaaggtgcttgcgttcagacaacttgccgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgtcactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggccgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +ttaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaagctcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagcagcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacttactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggcacctatgaaccagcttaccttggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgacaccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttggaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggccaactccctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaggggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggcgaggcagcactccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcctacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcaga------gctagtgaccaggccgacacagcaacccctagattgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagatttccagcaatggtccttacccga +ctactctggtcag-ttcacc------cacaacatgaacttggccccagctgttgcccccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgttaaccctgacactggtagagtgctgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacactcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggtgcttttatagcaggattagctggtgacatatttacaaatactgta +gggtctttggttaatgcagg---ggctaatgctattaatcaaaaagttgactttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaaccatgataaggaaatgttgaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttttgaccgcaggc +ggcttttcccccactgatgcagctcgtggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacgacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagagccgcacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------taggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagt--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ478134.1/1-7441 |Norovirus GII isolate G2_12 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------------------------------------------ggagg---------atacaat +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaagcaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgatgatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcaggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttaagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccttt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtctggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgactacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagatagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcaggcagagacctgttgttgtaatgatatcaggtagaccaggtatagggaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaatcttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagatcagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctaatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagttgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgaactgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaagtgtttccaagaagccatttactctctactcc +aaattactggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccaag-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggtaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcagaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaatccacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggggcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagaccctctaacgcaccgcttcctccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtattagagtcagcaaagaagactatcatcaatgttttggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccagatacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcgcaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgacccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttacttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagtctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgacgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcaggtctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaacgggcgaagg---------ag +ggctc---------agtaatggcgggggctttcattgcaggattggcaggcgacatgctcacgtcgtctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcacgataaagagatgctccta +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccattt---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------caaactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcctcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagt--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ478136.1/1-7537 |Norovirus GII isolate G4_11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------gat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaaggaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcataaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaattgctatgctttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattaaacatattgaatgtcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacgaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaggagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacatatcaagctac +agcttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctaattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaagggaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaga +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggtcctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaacgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ctttct-----------tt-------------tt---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ478140.1/1-7521 |Norovirus GII isolate G11_6 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +tctggtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaaggaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcataaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaattgctatgctttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattaaacatattgaatgtcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacgaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaggagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacatatcaagctac +agcttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctaattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +taatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaagggaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaga +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggtcctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaacgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtg--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL913975.1/1-7548 |Norovirus GII isolate Hu/US/2012/GII.3[P12]/Houston7410, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagctcaccactgtcaggcagcc +ggatgaaaccaacacggcgttcagtgtccccccactcaaccagagggagaacagggacgccaaggagccact +gaccggaacaatcctggaaatgtgggatggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggttgaactcgcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggaggctgcatggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccaaaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcctatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtagaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatatggattggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggccatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctactggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatataagggtgaaagagtcgtcctatgggatgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caactcccaccacctttaactttgaccgcaataaggtgcttgcgttcagacagcttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaagcagctcaaggatgtcaagaccatgccagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccaccttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtgaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtagaggatacagagga--------aacagccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggtcgtggtaagaagcacacggcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagggaagaaagaaatggaaaatattccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaggaggaagaggccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaagaggagaggacctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccgccaagcatctggtcgaggatagttaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgccgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgattttagaagaaggtgcacccgaagggaccgtggtcacgttactcatcaaa +aggccaactggagaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagatccaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctaggcaccacacca +ggtgactgtggctgtccctacatttacaagaggggaaatgactacgtagtcattggagttcacacggctgcc +gcccgtggaggaaatactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgctccaaaactcagcaccaagactaaa +ttctggaggtcgtccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccctcattacaacaagttatgagggaccaactgaaaccattcactgaacccaggggc +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcgtcaacgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcacaagcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaatgactgttggaacggggagtcctttacaggaaaattagcagaccaggcttctaaggct +aacctgatgttcgaggaggggaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgggcattcggaggcctgatggaggaactcaaagcacactgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagaaccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aagatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacatcattcaggccaactctctcttt +tctttttacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaaggaccacttgtcatctctgaagacctgaat +ggtctaactttcctgcggaggaccgtgtcccgcgacccagcgggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacattcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctatagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatctcctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +cttcgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttcttccatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaattttct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctattctgactatctccgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgtca +gaatggacgagtcacccttgatggtgagttgatgggcaccacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaacggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggttcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagtcagactttcaacaatgggctcttcccga +ctatgcaggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattatagactgcctggtcccccaagagtgggtgcagcatttctaccaagaatcagccccatccca +aactcaagtggccctagttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgttaacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgtgcgcagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacccccaacagtgggtcttcagtgaggtca +aattcaacccaaattac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattggatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL913976.1/1-7560 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Houston11006, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgattcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccaccatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactagaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagtttggcaaccta +tatgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggataggaaagactcaccttgccag +ggagctggccaagaaggtcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccctctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaatccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccacttttaactttgaccgcaataagatacttgcttttaggcagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggctgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgatgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacaggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagaactcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccttacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcacaaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagacctcgat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttttatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatactccactcagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaggctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagactttgtagggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcgatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccaaccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaacctt-----------ctaac------------ttttctactgctacta-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcat------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL913977.1/1-7559 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Houston11136, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agaaggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttaaaacctcttaacatccttaacattctggccacatgtgattg +gaccttcgcaggtatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaggagaaagccagaaaactctcaactaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgtgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtcttatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaagaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgaaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagagggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcat +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcgtctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggcgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggttggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcctaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaacgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgctaactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgacctggttatcccccccaatggttattttaggtt +tgattcctgggttaaccagttttacacgcttgcccccatgggaaatggaacggggcgtagg---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctactcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL943799.1/1-7558 |Norovirus GII isolate Hu/US/2012/GII.4 Den Haag[P4 Den Haag]/Guatemala0054, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgatgccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagagtagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctaccattatggtctgtatgttgagcaaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacaccctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgattcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgttgttcac +caggcccataaaagacttaataggaaaattaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagaaaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcacttctggcgagaatcgccgctgcacgctccctggtacacagagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +tgatcactgggatgcgtacaagggggaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgacttcctcgtgtacgcagaagcccccgaggtcgaaaaggcaa +agcgcgacttcccgggccagcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgctcgggcatcagggctgctccatgagagattggatgagttcgagctacagggtc +caacacttaccaccttcaacttcgaccgcaacaaagtgcttgccttcaggcagcttgccgctgaaaataaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatatctcaatcaaaaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaacgtgagagttgacagagtacagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccaggatcaggtattatgttaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgaataca +agagaattagagaggaaagaaatggcaagtactccatagaggagtacctccaggacagggacaaatac---t +atgaagaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggagacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaacttcggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggtgaattctgtcgcttgaggttcccaaaaccaatc +aggaccgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaagattcaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgcgaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaaaagaggaaacgactatgtagttattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +aataagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agaatcaagggtggcccctcgctgcagcaagtcatgagggaccaactgaaaccattcacggagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggtaagctggcagaccaggcttccaaagcc +aatctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcgttcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggcatg +aatatgaatgaggacggtcccatcatcttcgagaagcattccaggtacagataccattatgacgctgattac +t-ctcggtgggactcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagaaaaattaacagcaaaactc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggaccaggggccccaatcatgaagacccatctgaatcaatgatcccgcactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagttattgctgagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttagaaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacctacagttgaatcaagaactaaaccattctctgtcccaattttaaccgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---cgttgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ctactcaggcaga-aacacc------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcaggtctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggcctt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttccttccaatttagtagcaacctacaacaagcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattttctgagacagatgcagctcgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaagtca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggtcgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------ttaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL943800.1/1-7559 |Norovirus GII isolate Hu/US/2010/GII.4 New Orleans[P4 New Orleans]/Guatemala0015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagataccctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctactcaaagacaaagatagcctggcaaccta +catgaggaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaattgccgctgcacgctccctggtacaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcagactgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcattgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcacgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggaaacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatatctcaatcaaaaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaggccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaatccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgaataca +agagaattagagaggaaagaaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacaggagtgtggact +ataatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaattttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggaccgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaaggacgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacttatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgctacagcaagtcatgagagaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggtcatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtatagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgtcctgacaaaactgaagggcctcttgtcatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcagatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccagcattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccttaggccctgatttgaacccctacctttcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgttttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaaggactaaaccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaactggaacagttacgacccaacagaagaaatcccagc +tcctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgttgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccat +gcgcaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcgatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaagactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccgaggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL943801.1/1-7546 |Norovirus GII isolate Hu/US/2013/GII.3[P16]/Guatemala0082-GII3, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctcggcctaaacagccc-gccccgagggacaacccacaa +aag---------------------cctccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacgacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaatatatttctgtgttcactgtccacgctgttcac +cagacctataaaggacctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaggggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaagaggccaatgagctagccatggtaagagctatagaggatgctgt +actggatcttgaggcgatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggattagaccagtggttgttatgatatctggcaagccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgcctttaagccggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcccttattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttagtggacaccatgagagttggtaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgaccatcaagaggtgccgaatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtgaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcaccacctcaaacatgcccgaatcagatactatgtcagatgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactttggt +cgaagccaccatt---agaccaaagtga--------gtcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaagcaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcactgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcatacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatattgtggggcacccattctaggccctggaggggcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgttcggaagaatgaatactggaacggtgagaccttcattggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaaaaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtaggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaact-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaagagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaaccatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcattgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaacgcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaattttccaattgataatttgagtgcagcgcagattacaatgtgtcctcatgt +aattgtggacgtcagacagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtacacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagtcctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttttccctccctattttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgttcagtgtca +aaatgggcgcgtcacccttgacggtgagctaatgggcaccactcaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacaactagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acaacacaacg--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacaacttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcttggtcccccaggaatgggtccaacatttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacattagcccccatgggaactgggaatgggcgtaga---------ag +gatcc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataacaaatattta +caaaatg---------------------------------catcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttttcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttacaaccaatcaa--- +gccccaa----------------aacccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaaactca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------tagaactagagactgggttaaccaaca +gaattttaatctggaaccacacatgc---ctgggtctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgtagaaggggggagtcaaa--------tgtctag--t-----------gaaaaga----------- +---t-t-att-ttta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL943802.1/1-7546 |Norovirus GII isolate Hu/US/2013/GII.17[P31]/Guatemala0082-GII17, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctctctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacggccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcctatagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggatgaaattaacacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcggccatcagccgtgccaaagttgagctaacaccactctctctgttctg +gagacctgtatacacacccc---agtatctcatctccccagacactctcaggaaactacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttagaccataccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttatgcaccttgtcttcactattcac +caggcccattaaggacataataggaaggctgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaagcgtagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggagattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatctactttgagagcctgtaaagaccttggtgcatacggactggaaattttaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgccgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +tgaccattgggacgcatacaagggtgaaagagtagtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcagattgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtttttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caacttcgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagctccggaggtggaaagggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatagcccgagcatcagggttactccatgagagactagatgaatatgaactgcaaggtc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaatgtcgcgatcaggaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gtaagggtagtgtgaaaattgacaaagtgcaaagtgctgctgtgcaaactaacaatgaaatagccggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccagcaaagatggttgcccaaaacccaaa-- +-gag----gatgaag---agtttgttatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatctggtcgtggcaagaagcacacagccttctcaagcaaagggctcagtgacgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaagagtacctacaggacagagacaagtac---t +atgaggaggtggctattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagaactcatgcctctggcagccagaatgggaacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcctgacagggtccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggccataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacatactgcggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattacaacaagttatgagggatcagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgctaagaaaaccatcatcaacgttcttgagcaaacaattgac +ccacctcaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaagatggccccatcatctttgagaaacactccagatataaatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaggtagttgcagaagacctcctctcccctagtgtaatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagttgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaactgatgtccttactgggcgaggctgcactccacggcccagcattttacagcaaaatt +agtaaattggttattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatttatctagaatgtataa +tgggtatgctggtggcgtagaagttcaagtcctccttgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgtcaggaacaccttctttcacta +caataatcaacctgcc---aatcgcatgcgattggtagccatgttgtatacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagtttacatactt +ggtccccccttcggtagagtctaagactaaacccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtggattcattgttcacagcccaaaacaataatcttaatgttcaatgtca +aaatggtcgctgcacattagatggtgagttgcagggaaccactcagttgcaaccatcaggcatctgcgcctt +cagag-----------------------------------------gcaaaataacggcagatgtac----- +----gtccaaaccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcat----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgacccaacagaggatgtaccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tt-----caaccccacccaaacactacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gcacaag +tgatgattt---cactgttggccagcccacaa---------------------------aattcacaccag- +--------ttggcatc---aagattgaggatggac---------atgcatttgatcaatggaccctacccag +gtattcaggccat-ttaact------cttaatatgaatcttgccccacctgttgctccaaatttccctggtg +aacaactactcttctttaggtcaaatgtcccct------gtgccggtggcat------tagtg--------- +--atggtatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggctacatcactgttgcccattcaggtgattatccccttgttgtcccctccaatggatactttagatt +tgattcttgggtgaaccaattttattcacttgcccccatgggaactgggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcactggcgaacgccgg---ggccaatgccatcactcaaaagatagactttgaaaacaacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgagatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccccactgatgcggcgagaggagcagtgggtgcacccatgaccaaagtcctcgactggtctggt +actcgttactgggctccaaactccacgaggacaacaggttactcagggcagtttacatcagca--------- +ccagtgcatatgcccacaaaaacaattcagcctgctcc---------------------------------t +gttaaaa----------------ggactcaacctctttcttcctcttcag---------------------- +---------------gt--agtatctatagtctttcaacacagagcactgtcttgaccaagccttcttcagg +ctcttctt-----------ctgtt------------tcttctgcttctacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaat--------- +---c-a-a-t-tagttt---taa---tt------aaattgt-attgg-at-ttaattt--------taatt- +---------------gg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898506.1/1-7520 |Norovirus GII isolate Hu/US/2017/GII.1[P33]/Kansas1615, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gaggccagtgtacacccctc---agtacctcatatccccagaaactctcaaaaagttacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcattattcac +caggcccactaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtgccagtagtgatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagatcttggagcatatggattggaaattctaaagttggt +catgaagtggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgaggtccattgaggatgcagt +gctagaccttgaagcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcactatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggggaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +caattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagacctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggtaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctgatggacaccatgagagtaggaagccagctcaagaatgtcaagactgtgtcagagcttaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacttgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagatgatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaggaatacctccaagatagagacaagtac---t +atgaggaggttgccatagccagggccactgaagaggacttttgtgaggaagaagaggccaagatccggcaga +ggatttttagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccactcatgtcatacctcaaggggcacaagagttcttc +ggtgtatccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggaaggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggcactacacca +ggtgattgtggatgcccatatatctacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaattattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggctatccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgagctcaaggcccattgtgtcacactccccatcagggtggggatg +aacatgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctgtctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtgacagatttatctcctgacatcatccaagcaaactcacttttc +tctttctatggtgatgatgaaattgtgagcactgatattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattct +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttaggatctgtggttttgggta---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctgctccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttggaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--cagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtaccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------tcttcc--------ac-ttt--------tctgaaatt- +--------------ttc---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898507.1/1-7536 |Norovirus GII isolate Hu/US/2017/GII.2[P16]/Kansas0832, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacagggtcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaatatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgtatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcaaagactgaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagatttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcggtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttaca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtcc---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898508.1/1-7560 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Rochester14691, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagctattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttgcatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacgtgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtaga +actggtccctatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcatg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgagctgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaacgaactagccggcgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaaacgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgatcaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaattttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaaatcaggtgaattctgccggttgaggttcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccagaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactccctattc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctaacattcctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggtattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtattgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcactggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcgcagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gctgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggatctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tatccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgtagctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898509.1/1-7560 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Nashville13076, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgtc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttcaggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagctattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttgcatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggactggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacgtgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtaga +actggtccctatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccaggaatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctaacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caattttgaagcatg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaacgaactagccggcgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaaacgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgatcaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaattttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaaatcaggtgaattctgccggttgaggttccctaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccagaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggttaag +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctaacatttctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggtattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtactgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcactggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gctgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccagtaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tatccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgtagctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898510.1/1-7560 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Nashville13089, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaagatcgagctagcaccgctctctctgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaataaccacatgaccaccctacttaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgttataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgatcctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggggcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagagcatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggacgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggttggtttggaaaattggaacaaagttca +atcctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggttattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccactgttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctgggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggatcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatacc------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaacgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcgaggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaataggaatttgtcaccttttatga---aaggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898511.1/1-7560 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P31]/Cincinnati10188, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttaccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccgctcaatcaaagggagagcagggacgccaaagagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagtaccgctctctttgttttg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaatatattcttgtgtactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaagcctcttaacattcttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctacttaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatatagt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gtaagggtagtgtgaaagttgacaaagtgcaaagtgcctctgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcattgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacagaatctttggt +ccaagccacaggtggaagacacagagga--------gatggccaacaatgatggttgcctgaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcctggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggtacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcttgacgggatccaacgccaagagtatggacctaggcacaacgcca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaagggggtgat +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagagacttctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgagctcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcactccagatataggtatcactatgatgctgattac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactct +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgcagagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cctaatgtgcatttggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtaaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898512.1/1-7570 |Norovirus GII isolate Hu/US/2015/GII.4 Sydney[P16]/Kansas11006, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagctagtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggactgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactagacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccggtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggttgcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggtatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---aggtcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gac-------gaag---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtcggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcataggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagaggctgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagattac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagactctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccctgaacagttaaccgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaagttggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggcggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacccgtgctgattcccttacccgatgttaggaataatttctatcacta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------gctacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccca--------- +ca---------------------accatcgagggtact---------------------------------g +ccaggaa----------------gagctaatctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttctttttc-----t-tt-------------ttcttt +t---------ctttagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898513.1/1-7529 |Norovirus GII isolate Hu/US/2016/GII.14[P7]/Kansas0846, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcccttggcagtcaa---aaatctgtcaat +g------ac----agtaataatgccaccccttccgacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggtacc-------------aaggcaccc +agcagtga----------------tcagcattgccccacagttaagatcgggcctaaaacattgacaatccc +ccc-----------------------------cgaacccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactgtaattgggctaccggacttaacaacggt---gcaaaa +cgaacacgaaaatactccatacactgtccccccattaagtgagagggaacacagaccggctactgaaccact +ccctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagtctcgcgacgatagaactcacccccatatcactctactg +gagacccgtctacaccccca---actacttggtccccccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatctccagaaccaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctattaggtaaactcaaaccattgaatctactacacttgctcgcatcctgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggagcttttc---aatgtattctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaactgcaaggtcctgaagacttggctgtgga +gctcgttcccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccatctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaaaaccctggatctagaagaggaaaaagcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctagatccctactacataaggccaaagaggagat +gtttagcaggattagaccagtagttgtcatgatctcaggcagacctggcattggaaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgatcagagggtcggactcgtcccacgcaatggtgt +cgatcactgggacgcctacagaggagagagagtggtcttgtgggatgactacggtatggggagccctgtcaa +agacgccctgacactgcaagaattggccgacacgtgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacttagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgatttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagatttccccggccagcctgacatgtggaaagaccattttaagccagacttctcccacattaagctga +ctctagccccccagggtggatttgataagaatggcaacaccccacatggtaagggcaccatgcggtccctaa +cccaggggtccctaaccgctagagttgcaggccttgtccatgagaggaaggacgagttccaactccaaggaa +atgaccttcaaacatacaattttgacaccaacagagtctccgcatttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcgcagcgctcaagagtgtgaagaccttggaagatcttaaagttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaattctaagtaccgagtctcttccaacg +gtaaaggctcagtctctattgacagagttgaagacaatgcttcccagactgtgaacgaggtgcattcagcac +tcctcagactcaggcaggcgagggccagatactacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----agagg +gagtggcccaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagttgctcgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtactcggcttggtcaccggctcagaca +tcaggaagagaagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccactaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattagagagctcttt +ggagttgaaatcaaacaaatccaaattcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggagggcgccccagagggcactgtctgttctgtgctcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggagcaaacgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgcccctacatctacaagcgtggcaacgacatcgttgttgcgggcgtccacaccgcagca +gcccggggaggcaacactgtaatatgtgctacccaggggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggtgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcagcaagtcatgagagaccagctgaggcccttcacagaatccagaggc +aaaccacctagacctgcaattttagaggaagccaaaaagacagtaatgaatgttctagagcaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaaccacttcaagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtcctcttgcagaccaggcttctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggctgcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggcttctatgggggtcagaccttggcacaatgatcaggtgc +gccagggcttttggcggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcactctaagtacaggtatcactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcatcctctctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgacttt +gtcatctcagtccaggaaggcctgccatcaggagtcccatgcacatcgcaatggaattcaatagcacactgg +atactcactttgagtgcgatggcagaagtgtcaggcctctcaccggatgttgtccaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgatcccatgaagttaacacaaaaactt +agggagtacggcctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcacttcttggtgaggcctcactgcatggtcctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaacaattttgtacaagcccctgctggtgaatttacagtttcccctagaaattctcctgg +agaactcctacttgatttggaattgggtcctgaactcaacccctatcttgcacatttggctaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgccgccatcccacctagcttcccttatgaaaatttgtcacccgcccaattgactatgtgcccccatgt +gatagtggatgtgaggcaattagaaccagtgctcttgccaatgccagatataagaaatgttttctatcatta +taatcagaataacagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaattc +aggtgatgatgtgttcacggtgtcttgccgcgttctaacgcgcccttctccagatttccagttcactttctt +ggtcccacctacagttgagtctaaaactaagaacttcacccttcccgttctcagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcagatgcacaactgatggtgagctgcttggtaccactatcttacaatctgtgtctatttgcaattt +caaag-----------------------------------------gaacaatgcaggcagagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttgcaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatacggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccact--------agg-----------gcacatgatgctcagat +tgacactgcgggcgatacattcgccccgaaaattggccaggttcgatt---ta---------aatcaagttc +cagagattt---tgacctgcatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcacccttttagacagtggtccctgccaaa +ctacggtggccac-cttgcc------ctgaacaatcatttagccccagctgtgacaccgctcttccctggcg +agcaaatcttgttctttaggtcatacattccaa------gcgccggaggcca------tacag--------- +--acggtgctatggactgcttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagaccaccctattgtgatgcccaccaatggttactttaggtt +tgaagcttgggttaatcctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcactcgtgggtgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgactgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagtcaaagcacctatgacgcagattcttgattggaatggt +tctagatattgggctcctaactccatgaagacaactggctattcaggtacatttgcttctcaaggcatta-g +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaaccc--------------caagtgctgttaaacc---------------------------------- +-------------------------------------tactaggcctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagttcttcttctactgccccctcac----------------- +---------------------aatcaacaca---gtcaacaacgctgtctg-------cagg--------ga +cagggtc----c---tccag-------------------acctaacactgtgt---------ccacaaagac +ttctac-------------------att--------------gtcgaggacaagtgattgggtcagaggcca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcaa +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttctcc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>OL898514.1/1-7560 |Norovirus GII isolate Hu/US/2016/GII.4 Sydney[P16]/Kansas0843, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagaatggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatgtattcctatgttcattgtccacattattcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgacacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccgcatgggaaaggagtaatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaagcccccccaagcatatggtctagaattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccataaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtggaccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccgagaccaagtgtactggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaaaaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttgggagactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggtcaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +gatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggaatggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaagttg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcccggggaccctcc------------------ta +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aggtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898515.1/1-7560 |Norovirus GII isolate Hu/US/2017/GII.4 Sydney[P16]/Kansas1621, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattagaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggagcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgctgtgggacgactatggcatgagcaatcccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaagaacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagtcattggagtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgaaggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttactgaacccaggggc +aaacctccaagaccaagtgtactggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggaatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccattatgatgcagattac +t-ctcgttgggactcaacacaacagagggcggtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaattacaataaatgaagggcttccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaaggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggttggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgtcaggaataatttctatcatta +caatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggtgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactacgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgctcgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcggcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgttcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgagggtca +aagtagggatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL898516.1/1-7568 |Norovirus GII isolate Hu/US/2017/GII.4 Sydney[P4 New Orleans]/Kansas0853, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccgcgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactgggacaatcctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacagaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctatacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagacataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gaccttcgcgggtatagtggagtctctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactctgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccattgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgaggacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaacgccctcctagcgagaattgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggaccagcgtgtgggcctcattccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggcttcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacaaggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggtt +cggctcttaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaagt +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagaatacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccgttcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactacgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatctactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggattgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggccaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgagggctgatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaaattctcttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaatta +caacaggcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcattgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatccc-----------ctaac------------ccttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctctctttt--t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OL826940.1/1-7500 |Norovirus GII isolate 2020070 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggtgactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcaccccagggcggcttcgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaaat +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagtttcggtggaaaaggtcaagaacacctctgtacagaccaataatgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcatcgcacgccgtatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagcgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagtattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatc +agaacagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaag +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaacttgcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +ccgaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccccagtgtagtagatgtaggagatttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtggctcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggttatagctgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgttagaaccttggaacctgttttactaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtacctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aatttaccccag- +--------ttgggctc---------aatgacactgaacac---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattccggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggattagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL826941.1/1-7500 |Norovirus GII isolate 2020095 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccggtgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaagccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttattcggtgactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggcttcgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaaat +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagtttcggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcatcgcacgccgtatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagcgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagtattc +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatc +agaacagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaag +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagacctttactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +ccgaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagatttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgatataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagctccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgttagaaccttggaacctgttttactaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtacctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttgggctc---------aatgacactgaacac---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +cgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaatgaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgaag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggtct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgttaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL826942.1/1-7500 |Norovirus GII isolate 2020122 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaacaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggattagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatataaaggtgagagagttgtgttgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgtatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaataggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------attagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacttacgcacaggcatgcgcctcacttgacaaaaccacctccagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcttcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggaccccttatcatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaactaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---ttcccagtatccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +gaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL826943.1/1-7500 |Norovirus GII isolate 2020277 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagctggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtagccaacacagcattcagtgttccacccctgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggctttttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtaagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactagacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgattatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctacctgttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagcgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggtgtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcccgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaaaccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggcctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataacagaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaatacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacagattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagcca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcttactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaataccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggct-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------cagag------------------c +tacgtc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---aac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL721917.1/1-7513 |Norovirus GII isolate P6 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgagggcttat +acttggtgtgcataagccaccggcagccattaaccttgccaagatcgagctagcgccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattgcatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgctgttgggtgttagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccattgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggaactggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggatgactatggaatgagcaaccccatcca +tgatgccctcagattgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcaggattactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactggccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtcttatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacaccgccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acagtgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacgacaccactcccacctggcacttacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtcctcgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagtcgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgaaggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaagagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggagcaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtattcacagtttcttgccgagttctcacgagaccatcccctgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acgaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL468714.1/1-7494 |Norovirus GII isolate GII.6/GuangXi/16451061 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaaagg---agcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcggtttaccagacttgacgacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggtccacaagcctcctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---ataatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgatctcaatgacacatggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaatgcaattctctgtgcacttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcttccctgataggtgattttcaattgcaggggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaactctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcgtcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccagcctgacatgtggaaggaccattttaagccagacttttctcacataaaactga +ctctagccccacagggcggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatataactttgacaccaacagagtcactgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcctccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatgc +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccatcgaggaatacctgcaagaccgggaccgctac---t +atgaggaggtggcagtcgcccgggcgacagaagaggacttctgcgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcacaagtctggagagttctgcaggtttagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttattgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagatgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagtatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgccgactat +t-ccaggtgggactcaacccagcaaaggagcgttctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaataacacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaaactc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactacatggtccccagttttacaagaaagtt +agcaaaatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +gattgttgacgtaagacagcttgagccagtgcttttgccccttcctgacataaggaataggttctttcatta +taatcaggaaaatacc---ccccggatgagacttatggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccctgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ttccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcacactagatggaacacttcaggggaccacccaactggtacctacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttaggtgccatagatttcaaaggaactgtttttggagtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaaggaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtggaatatgactttaataagcag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgaggggtgctgtgaacgcgccgatgacaaaaattttggattggaatggg +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgctctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttctac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgccctccaaacaacttttgttacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgccc +atgtgcgcaggcgaggggagtcaca--------gat------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336382.1/1-7334 |Norovirus GII isolate 19121200 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------aag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagttggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccacttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcagcatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctctcccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgct------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336383.1/1-7330 |Norovirus GII isolate 20062001 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------aaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaatagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaactctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgtatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcgtaacatcaactcatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatttcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaatttcccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgaatttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactg------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336384.1/1-7380 |Norovirus GII isolate 20051046 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------------------atcttcaggtgaag---------------gcttattcacaaatat +gtcttccactttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgtcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaaaaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgttcgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaataagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagagcacctccatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccacatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacgcagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtttatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +cagagacccatacagctcatggcactgcttggtgaagcttctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccctgactttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacacaca----------- +-----------tcacggg------------------------------------------------ta---- +-------gtcaca----------------------------------attacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggtaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgacttggttatcccccctagtggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tat-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgc-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336385.1/1-7415 |Norovirus GII isolate 21063054 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaatc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgattccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatttacggtggttccacgtatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacacctctatacaaaccaacaacgagttggccggggcct +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctttgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaattgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaactcgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttagaaatcatgg-tcagattctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctactagcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccccgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggatcagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttctttagatccaccttgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggaagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacacttcaggccacttttccactcct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaaactt-----------ctaac------------tcttctgctactacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcag------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336386.1/1-7411 |Norovirus GII isolate 1915Y216 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcag----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336387.1/1-7418 |Norovirus GII isolate 20153072 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------cgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaatc +ggacgtggccaatacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgattccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgattatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacacctctatacaaaccaacaacgagttggccggggcct +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctttgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaactcgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactagcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggatggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggatcagaaacaattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacagttcaggccacttttccactcct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctaccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctct------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336388.1/1-7416 |Norovirus GII isolate 21161049 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccactctaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaggaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagggaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaacatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaagatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattggtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgatagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttagtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttt +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgagatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgctgatccccttacctgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcactacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagc------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL336389.1/1-7422 |Norovirus GII isolate 21051018 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcactaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagaatccc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtaccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +aag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaatagaaaaccctt +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccactaaacatattgaatatcttggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +gctcgtaccagtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagccgccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggaaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccagttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtggccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaagaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgttatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgaaggtgaggcaactctcgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgaccct +cgtgttaggggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccacac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagattac +t-ctcgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtggtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccataacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttgaccgccaagttg +aaggagtacggtctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +cagagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccacttagccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggtttaagccctagccaggtcactatgttccctcacat +aatagtagatgttagacaattggaacctgtgctgatccccttacccgatgttaggaataacttctatcacta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcatttgtcgttcaaccaca +aaacggcagatgcacaactgatggcgtgcttctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacact----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgacttcgctccaaagctgggtagagtccaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtcgggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +cgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagtttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaagactttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaattcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctgctgccacttctg----------------- +-------------tgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactagaagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctct------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>OL451532.1/1-7584 |Norovirus GII isolate N21051, complete genome +----gtgaatgaaaat---ggcgtctaac-gacgctaccactgcgaccgctggcaaaaccagcacaaacagt +gaaattcac----aaccaagatgtaaacactacatcaagc------------------ctcttcgccaacat +gaccgttggcttgaagaggg----ccctgggggcgaggccaaaacagtctgcccccagggcttcctccccca +atagggaggggaagtctgaaaccaccactaggactccccccctaaacaagggaggaag--ggacaacacccc +ccaaatacccc--------------------ccccgccacccaatgg------tgaggacataatcatcaaa +tacaccaaac----------agga---tgatgtgattgcaggggtgcccactgtcgctacggtggacgtccc +cccaacacacaacaccgcctacagtgtccctcccttggatcagagggagaaggttgaggcaaaggaacccct +gacaggctcaataattgagatgtgggatggtgaaattttccattatgggctctatgttgagaagggcttggt +tcttggagtgcacaaacccccggctgccataagctttgcacgcatagagctcacccccctctctttatactg +gagaacagtctacacaccac---cttatctagtggccccagaaacacttaggagactccacggggagtcgtt +cccatacaatgcatttgacaataattgctactccttctgctgttgggtcttggacctgaacgattcctggct +taa---cagaaagtttgtttcgagaactacaggtttctacagaccctaccaagagtggaacagaaagcccct +accgaccatggatgagggaaaactcaagaaagtggccaatgtgctactgtgtggtctctccggtcttttcac +cagaccaatcaaggacctcatagggaaactaagaccattgaacatactcaatatcatcaccaattgtgattg +gacttttcccggggttgtggaagctctcatattacttgcagaactcttc---ggagtcttctggacaccacc +agacatttctacttttatagcatcacttctgggtgattatgaaatgcagggccccgaggacattgcagttga +agttgtgccagtaattctcggtggcataggcatggtgctcgggttcaccaaagagagaatcggccggttgct +gagctctgccgcttcttcgcttagggcgtgcagagagatcggcaattacggaatagaagtggtaaagttggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggacatggtgagggcaatagaggatgccgt +gctcgactttgaggccatacaaaacaaccacatgacagcattactcaaagacaaaaatagcctagcaacctt +ccttagggagttagacatggaagaggagaaagcgcggaagttatcaacaaagtccgcgtccccagacatcat +tggcaccataaacgcccttctagccaggattgccgccgctaggtccctagtccacaaggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcattatgatctctggccgacctgggataggaaagacacatctagcccg +cgacctggccaaaaagatggcggcaaccctctcaggtgaccagagggtagggctcgtgccaaggaacggtgt +cgatcattgggacgcatacaaaggggagagaattgtgctctgggatgactatggaatgagcaaccctgtgac +cgacgcgctgcggctccaagagcttgccgacacatgccccttgacgctcaactgtgataggatagagaacaa +ggggaaggtctttgatagtgacactataattatcaccaccaatttggccaatcctgcccctctagattatgt +taattttgaagcttg-ctctcgccgaattgatttccttgtctatgcggactccccctcggttgataaggcga +agagagacttccccggccaaccagatatgtggaaggacgcatttaaaccagatttctcccacataaaactcc +aactggcaccacaagggggctttgataagaacggaaacaccccccatgggaagggtgtcatgaaatcactga +ccacacattcccttattgcccgtgccacgggtctgttacatgagaggttggatgagttcgacctacaggggc +ctgaactacctgtgtacaattttgaccaaaacagggtggccgcttttagaaagcttgcggctgacaacaagt +acgggctcgtggaaaccataaaagtgggcaacaaactgaagagtgtcaggactctagaacaacttaaggatg +ccttaaaagacataagtatcaagccttgcagaataatctacaactccatggcttatgatctcgactcgaatg +ggtcaggaagggttaacgtcaaaaaggttgtggatcataaagtccaaactaacaatgaactcaactccgcgc +ttaacaacctgcgtggcgccagggtaagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaagaatgacgcgaagattaa------acgtcagtggtatctggg +ccaggccaga------------aaaaca--------ggtggaggccattgaagaacccccagtcccccca-- +--------tctgaag---attggactataaccccatcagatgcaatccaagagggcaagaagggcaagaaca +aaagtggcagaggtaagaaacacactgccttctccagcaaaggcctgagcgatgaggagtatgatgaattta +aaagaatcagggaagagaggcagggaaaatattccatagaagaatacctccaggacagagaccggtac---t +atgaggaattggccatagccaaagctacagaagaaaacttctgtgaggaggaagaaataaaaattagacaga +gggtcttccgcccaaccagaaaacaacgtagggaagaaagggcgaccctaggactggtcacgggtagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaaaggaaaattgtgggctgatgatgaccgcagtgtaaact +acaatgagaaaatagatttcgaggcccctcctagcctttggtcccgaatagtgaattttgggtcaggatggg +gtttctgggtgtctt-ctaacctgttgatcacatcaacacatgtcatccccccgaacatgactgaggctttt +ggtgtaccaataagccagatacaaatacacagaagtggagagttctgcaaaatgaggttccccaaggctata +agacctgatgtctcgggcatgatcctagaggaaggagcacctgaaggaacggtggtgaccatactgattaag +agaaccaccggtgagctcatgccattggctgcccgaatgggcacccacgccaccatgaagatacaagggaaa +atgcttggaggtcaaatgggaatgctcctcacggggtccaacgccaagaatatggacctcggcaccattcct +ggagactgtggttgcccctatgtgtacaagagaggtaatgattgggtggtcataggagtgcacaccgcagct +gccagaggtggcaacactgtgatctgcgccacccaggggccagatggtgaggccacactcgagggaggagac +aatcacgggacctactgtggtgcaccaatacttggaccaggaaatgcaccaaagctcagcaccaaaaccaag +ttttggaggtcatccaacgccccactcccacctggtacttatgagcctgcttacctaggaggaaaggaccca +agggtcaaagggggtccgtcattacaacaggttatgagggatcaactcaaacccttcaccgccccccgaggg +aaaccaccgcgaccagcgattttagaggcagccaaagagaccatctgcaatgtgcttgagcaagtcattgaa +ccaccccaaaaatggtcttatgctcaggcctgtgcttcattggataagacaacatctagtggtcacccccac +cacatgaaaaagaatgacaattggaacggagagtctttcactggtgtattggctgatcaggcctctaaggcc +aatctcatgtttgaacagggaaaacacatgcaacccgtgtacactgctgctctcaaagatgagctcgtcaag +actagtaagatctatgaaaacattaagaaaagacttctatggggatcagatctgggcacaatgatccgttgt +gctagggcattcggtggcctcatggatgagatgaaggcaaattgtgtgaatttaccaattagagttggcatg +aacatgaatgaagatggacccatcatatttgagaagcattcaaaatacaaatatcattatgatgctgactat +t-ccaggtgggactcaacccaacagaggcacatccttggggctgcccttgaaataatgg-ttagattttcag +ctgaacctgaatt-agcacaaatagtgtctgaagatctcctagcccccagtgtggtggacgttggcgacttc +aaaatcaccataaatgaaggattgccctctggagtgccgtgtacatcacagtggaactcaatttcccactgg +ctcataacactgtgtgccatatcagaagtttcaggactgtcgccagacgtagtgcaaacaaactcctgcttc +tccttctacggggatgatgagatagtcagcaccgacatcaagttagatcccatgaaactgaccaacaagttg +aaagagtatgggttgattccaacaaggccagacaagacagaggggccgctcataattaaagagagtcttgag +ggcctaactttcctgaggagggacgtgtgtcgagacccagctggttggtatgggaaacttgaccaatcctca +atcatgagacaactgtattggactaagggaaccaaccatgatgatcccaatgagacaatgattccacactct +cagagacccatacaattgatgtcactgctaggggaggcagcactgcatggtccaactttctacaagaaagtc +agcaaattggtcatcactgagctcaaagaaggtgggatggatttctatgtaccaagacaggaacctatgttc +agatggatgagattctcggatctcagtacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctag---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggcgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtgttacttaatctggaactaggcccagaaataaatccttacctggcccacctttctagaatgtacaa +tggctatgcaggtgggtttgaagtgcaggtggtcctagctggaaatgcattcacagc---aggaaaggtaat +ctttgcagccataccccccaattttcctattgataatctgagtgcagcacagatcacaatgtgcccgcatgt +gattgtggatgttaggcagttagaaccaatcaacctcccaatgcctgatgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttgatcgcaatgttgtatacacctcttagagcaaataattc +tggtgatgatgttttcactgtgtcttgtagagttttaaccaggcctagtcctgatttctctttcaactttct +tgtaccacctactgtggaatcaaagacaaagcctttcacccttcctattctgaccatctcggagatgtccaa +ttctagg---tttccagtgccaattgattctctacacaccagcccaaccgacaatgttattgtccaatgtca +aaacgggcgcgtcactctcgatggcgagctaatgggtaccactcaactattaccaagccaaatatgtgcttt +caggg-----------------------------------------gcacgctcacaa-ca----------- +-----------tcaacaaatag--------------------------------------------gg---- +----acagggaccaacctgatgcagcag----cccccaggatattcgaccatcgt----------------- +----------tggcatattcaattggataacctgaatggcaccccttatgatcctgcagaggacataccagc +tcccttgggtacgccagattttcagggtaaggtctttggtgtggctagccaga---ggaaccccga---tgg +c--------------------------acaaca--------aga-----------gcacatgaggcaaaagt +ggacacaacatctggccgctttactccaaagttgggttccctagaaataatca---------ctgaatctgg +tgattttaa---tcc---aaatatgccaacaa---------------------------aattcaccccag- +--------ttggtgttggagttgacactgatg------------aagaattccaacaatgggtattgcctag +atattctggccag-gtcacc------cacaacatgaatctggccccagctgttgcccccaacttccctggtg +agcagcttcttttcttccgctcacagctaccat------cttctggtgggac------gtcca--------- +--gcgggactttggactgcttggtcccccaggagtgggttcagcatttctaccaggaatcagcccctgccca +gacacaggtggccctggtcagatatgtcaaccctgacactggtagggtgttgtttgaggccaaacttcataa +attgggttttataaccatagcaaagaatggtgactctccaataactgtccccccaaatgggtattttagatt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggcaacgggcgcaga---------ag +gattc---------aataatggcaggagcatttgtggcaggattggctggtgacatactcacaaacactgtg +ggatctttggtgagtgcagg---ggctaatgctattaatcagaaggttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaaaaggctgcaggctgatatgattgctatcaaacaaggggtcttgaccgctagc +ggcttttcccctgctgatgcagcccgtggggcaatcaatgctccagtgacaaaagtcctggactggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggctttacaagc------------ +ca-----------agttgtgcacaggaccacaccaaat---------------------------------t +tcaagat----------------gagccagactcccaagccccca--------------------------- +-------------------------------------------------ccc---------------agcag +cgggtctt-----------cagtg------------agatcaaactcaacacagctcactagc--------- +----------ctgagc-------tcacactc------atccgggtcacctcgatccagtgggtccacggtta +tcagctcac------tac--------------------------------cat------------------c +ttccag---------------------------------------caggaccagagattgggttaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttaggacagcttttgtcactccaccatctagcac +agtttcc---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaagattatctt---- +--tg-a-att-tgat------------------------------------ttagatt------aggtttaa +t------------ttgg---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>OL451533.1/1-7584 |Norovirus GII isolate NS21078, complete genome +----gtgaatgaaaat---ggcgtctaac-gacgctaccactgcgaccgctggcaaaaccagcacaaacagt +gaaattcac----aaccaagatgtaaacactacatcaagc------------------ctcttcgccaacat +gaccgttggcttgaagaggg----ccctgggggcgaggccaaaacagtctgcccccagggcttcctccccca +atagggaggggaagtctgaaaccaccactaggactccccccctaaacaagggaggaag--ggacaacacccc +ccaaatacccc--------------------ccccgccacccaatgg------tgaggacataatcatcaaa +tacaccaaac----------agga---tgatgtgattgcaggggtgcccactgtcgctacggtggacgtccc +cccaacacacaacaccgcctacagtgtccctcccttggatcagagggagaaggttgaggcaaaggaacccct +gacaggctcaataattgagatgtgggatggtgaaattttccattatgggctctatgttgagaagggcttggt +tcttggagtgcacaaacccccggctgccataagctttgcacgcatagagctcacccccctctctttatactg +gagaacagtctacacaccac---cttatctagtggccccagaaacacttaggagactccacggggagtcgtt +cccatacaatgcatttgacaataattgctactccttctgctgttgggtcttggacctgaacgattcctggct +taa---cagaaagtttgtttcgagaactacaggtttctacagaccctaccaagagtggaacagaaagcccct +accgaccatggatgagggaaaactcaagaaagtggccaatgtgctactgtgtggtctctccggtcttttcac +cagaccaatcaaggacctcatagggaaactaagaccattgaacatactcaatatcatcaccaattgtgattg +gacttttcccggggttgtggaagctctcatattacttgcagaactcttc---ggagtcttctggacaccacc +agacatttctacttttatagcatcacttctgggtgattatgaaatgcagggccccgaggacattgcagttga +agttgtgccagtaattctcggtggcataggcatggtgctcgggttcaccaaagagagaatcggccggttgct +gagctctgccgcttcttcgcttagggcgtgcagagagatcggcaattacggaatagaagtggtaaagttggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggacatggtgagggcaatagaggatgccgt +gctcgactttgaggccatacaaaacaaccacatgacagcattactcaaagacaaaaatagcctagcaacctt +ccttagggagttagacatggaagaggagaaagcgcggaagttatcaacaaagtccgcgtccccagacatcat +tggcaccataaacgcccttctagccaggattgccgccgctaggtccctagtccacaaggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcattatgatctctggccgacctgggataggaaagacacatctagcccg +cgacctggccaaaaagatggcggcaaccctctcaggtgaccagagggtagggctcgtgccaaggaacggtgt +cgatcattgggacgcatacaaaggggagagaattgtgctctgggatgactatggaatgagcaaccctgtgac +cgacgcgctgcggctccaagagcttgccgacacatgccccttgacgctcaactgtgataggatagagaacaa +ggggaaggtctttgatagtgacactataattatcaccaccaatttggccaatcctgcccctctagattatgt +taattttgaagcttg-ctctcgccgaattgatttccttgtctatgcggactccccctcggttgataaggcga +agagagacttccccggccaaccagatatgtggaaggacgcatttaaaccagatttctcccacataaaactcc +aactggcaccacaagggggctttgataagaacggaaacaccccccatgggaagggtgtcatgaaatcactga +ccacacattcccttattgcccgtgccacgggtctgttacatgagaggttggatgagttcgacctacaggggc +ctgaactacctgtgtacaattttgaccaaaacagggtggccgcttttagaaagcttgcggctgacaacaagt +acgggctcgtggaaaccataaaagtgggcaacaaactgaagagtgtcaggactctagaacaacttaaggatg +ccttaaaagacataagtatcaagccttgcagaataatctacaactccatggcttatgatctcgactcgaatg +ggtcaggaagggttaacgtcaaaaaggttgtggatcataaagtccaaactaacaatgaactcaactccgcgc +ttaacaacctgcgtggcgccagggtaagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaagaatgacgcgaagattaa------acgtcagtggtatctggg +ccaggccaga------------aaaaca--------ggtggaggccattgaagaacccccagtcccccca-- +--------tctgaag---attggactataaccccatcagatgcaatccaagagggcaagaagggcaagaaca +aaagtggcagaggtaagaaacacactgccttctccagcaaaggcctgagcgatgaggagtatgatgaattta +aaagaatcagggaagagaggcagggaaaatattccatagaagaatacctccaggacagagaccggtac---t +atgaggaattggccatagccaaagctacagaagaaaacttctgtgaggaggaagaaataaaaattagacaga +gggtcttccgcccaaccagaaaacaacgtagggaagaaagggcgaccctaggactggtcacgggtagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaaaggaaaattgtgggctgatgatgaccgcagtgtaaact +acaatgagaaaatagatttcgaggcccctcctagcctttggtcccgaatagtgaattttgggtcaggatggg +gtttctgggtgtctt-ctaacctgttgatcacatcaacacatgtcatccccccgaacatgactgaggctttt +ggtgtaccaataagccagatacaaatacacagaagtggagagttctgcaaaatgaggttccccaaggctata +agacctgatgtctcgggcatgatcctagaggaaggagcacctgaaggaacggtggtgaccatactgattaag +agaaccaccggtgagctcatgccattggctgcccgaatgggcacccacgccaccatgaagatacaagggaaa +atgcttggaggtcaaatgggaatgctcctcacggggtccaacgccaagaatatggacctcggcaccattcct +ggagactgtggttgcccctatgtgtacaagagaggtaatgattgggtggtcataggagtgcacaccgcagct +gccagaggtggcaacactgtgatctgcgccacccaggggccagatggtgaggccacactcgagggaggagac +aatcacgggacctactgtggtgcaccaatacttggaccaggaaatgcaccaaagctcagcaccaaaaccaag +ttttggaggtcatccaacgccccactcccacctggtacttatgagcctgcttacctaggaggaaaggaccca +agggtcaaagggggtccgtcattacaacaggttatgagggatcaactcaaacccttcaccgccccccgaggg +aaaccaccgcgaccagcgattttagaggcagccaaagagaccatctgcaatgtgcttgagcaagtcattgaa +ccaccccaaaaatggtcttatgctcaggcctgtgcttcattggataagacaacatctagtggtcacccccac +cacatgaaaaagaatgacaattggaacggagagtctttcactggtgtattggctgatcaggcctctaaggcc +aatctcatgtttgaacagggaaaacacatgcaacccgtgtacactgctgctctcaaagatgagctcgtcaag +actagtaagatctatgaaaacattaagaaaagacttctatggggatcagatctgggcacaatgatccgttgt +gctagggcattcggtggcctcatggatgagatgaaggcaaattgtgtgaatttaccaattagagttggcatg +aacatgaatgaagatggacccatcatatttgagaagcattcaaaatacaaatatcattatgatgctgactat +t-ccaggtgggactcaacccaacagaggcacatccttggggctgcccttgaaataatgg-ttagattttcag +ctgaacctgaatt-agcacaaatagtgtctgaagatctcctagcccccagtgtggtggacgttggcgacttc +aaaatcaccataaatgaaggattgccctctggagtgccgtgtacatcacagtggaactcaatttcccactgg +ctcataacactgtgtgccatatcagaagtttcaggactgtcgccagacgtagtgcaaacaaactcctgcttc +tccttctacggggatgatgagatagtcagcaccgacatcaagttagatcccatgaaactgaccaacaagttg +aaagagtatgggttgattccaacaaggccagacaagacagaggggccgctcataattaaagagagtcttgag +ggcctaactttcctgaggagggacgtgtgtcgagacccagctggttggtatgggaaacttgaccaatcctca +atcatgagacaactgtattggactaagggaaccaaccatgatgatcccaatgagacaatgattccacactct +cagagacccatacaattgatgtcactgctaggggaggcagcactgcatggtccaactttctacaagaaagtc +agcaaattggtcatcactgagctcaaagaaggtgggatggatttctatgtaccaagacaggaacctatgttc +agatggatgagattctcggatctcagtacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctag---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggcgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtgttacttaatctggaactaggcccagaaataaatccttacctggcccacctttctagaatgtacaa +tggctatgcaggtgggtttgaagtgcaggtggtcctagctggaaatgcattcacagc---aggaaaggtaat +ctttgcagccataccccccaattttcctattgataatctgagtgcagcacagatcacaatgtgcccgcatgt +gattgtggatgttaggcagttagaaccaatcaacctcccaatgcctgatgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttgatcgcaatgttgtatacacctcttagagcaaataattc +tggtgatgatgttttcactgtgtcttgtagagttttaaccaggcctagtcctgatttctctttcaactttct +tgtaccacctactgtggaatcaaagacaaagcctttcacccttcctattctgaccatctcggagatgtccaa +ttctagg---tttccagtgccaattgattctctacacaccagcccaaccgacaatgttattgtccaatgtca +aaacgggcgcgtcactctcgatggcgagctaatgggtaccactcaactattaccaagccaaatatgtgcttt +caggg-----------------------------------------gcacgctcacaa-ca----------- +-----------tcaacaaatag--------------------------------------------gg---- +----acagggaccaacctgatgcagcag----cccccaggatattcgaccatcgt----------------- +----------tggcatattcaattggataacctgaatggcaccccttatgatcctgcagaggacataccagc +tcccttgggtacgccagattttcagggtaaggtctttggtgtggctagccaga---ggaaccccga---tgg +c--------------------------acaaca--------aga-----------gcacatgaggcaaaagt +ggacacaacatctggccgctttactccaaagttgggttccctagaaataatca---------ctgaatctgg +tgattttaa---tcc---aaatatgccaacaa---------------------------aattcaccccag- +--------ttggtgttggagttgacactgatg------------aagaattccaacaatgggtattgcctag +atattctggccag-gtcacc------cacaacatgaatctggccccagctgttgcccccaacttccctggtg +agcagcttcttttcttccgctcacagctaccat------cttctggtgggac------gtcca--------- +--gcgggactttggactgcttggtcccccaggagtgggttcagcatttctaccaggaatcagcccctgccca +gacacaggtggccctggtcagatatgtcaaccctgacactggtagggtgttgtttgaggccaaacttcataa +attgggttttataaccatagcaaagaatggtgactctccaataactgtccccccaaatgggtattttagatt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggcaacgggcgcaga---------ag +gattc---------aataatggcaggagcatttgtggcaggattggctggtgacatactcacaaacactgtg +ggatctttggtgagtgcagg---ggctaatgctattaatcagaaggttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaaaaggctgcaggctgatatgattgctatcaaacaaggggtcttgaccgctagc +ggcttttcccctgctgatgcagcccgtggggcaatcaatgctccagtgacaaaagtcctggactggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggctttacaagc------------ +ca-----------agttgtgcacaggaccacaccaaat---------------------------------t +tcaagat----------------gagccagactcccaagccccca--------------------------- +-------------------------------------------------ccc---------------agcag +cgggtctt-----------cagtg------------agatcaaactcaacacagctcactagc--------- +----------ctgagc-------tcacactc------atccgggtcacctcgatccagtgggtccacggtta +tcagctcac------tac--------------------------------cat------------------c +ttccag---------------------------------------caggaccagagattgggttaatcaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttaggacagcttttgtcactccaccatctagcac +agtttcc---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaagattatctt---- +--tg-a-att-tgat------------------------------------ttagatt------aggtttaa +t------------ttgg---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>OK376252.1/1-7517 |Norovirus GII isolate CHN-GII4 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----ttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaaagagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgc-------------------------ccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376253.1/1-7536 |Norovirus GII isolate CHN-GII7, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376254.1/1-7536 |Norovirus GII isolate CHN-GII12, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376255.1/1-7536 |Norovirus GII isolate CHN-GII15, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376256.1/1-7536 |Norovirus GII isolate CHN-GII16, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggattc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376257.1/1-7021 |Norovirus GII isolate CHN-GII17 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------------------tgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaagccccgcgggcataacagaagaattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376258.1/1-7536 |Norovirus GII isolate CHN-GII19, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376259.1/1-7536 |Norovirus GII isolate CHN-GII20, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccggaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376260.1/1-7536 |Norovirus GII isolate CHN-GII22, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376261.1/1-7536 |Norovirus GII isolate CHN-GII23, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagaccaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376262.1/1-7536 |Norovirus GII isolate CHN-GII24, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376263.1/1-7536 |Norovirus GII isolate CHN-GII27, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK376264.1/1-7536 |Norovirus GII isolate CHN-GII32, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaaaaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggtctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggaggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---aattcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacttccagcgggcacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggttcggaaaactggaccaaagctca +attttgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgaggaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtagtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagcgagtgggttagggatca +gaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-tttc---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>OK012403.1/1-7486 |Norovirus GII isolate GII/Hu/RU/2017/GII.2P16/Nizhny_Novgorod2004 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------g---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-accccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcgtt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttatcaagagtggaacagaaaaccctt +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacgaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccaccctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccttat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccggaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtagctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cctaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagttcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggagccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +------------------------------------------------------------------------ +- +>OK012404.1/1-7418 |Norovirus GII isolate GII/Hu/RU/2017/GII.2P16/Nizhny_Novgorod2079 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------cttaaagaaag----ccctcggggctaggcccaaacagcct-accccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcgtt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttatcaagagtggaacagaaaaccctt +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacgaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccaccctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccttat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccggaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtagctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cctaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagttcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggagccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MZ958411.1/1-7565 |Norovirus GII isolate GII/Hu/RU/2017/GII.4_Sydney[P16]/Nizhny_Novgorod2275 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcagaaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccgtggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgctgtcga +actcgtaccagtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcgagaaaggtggcatctactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaagcacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccattatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagataggtac---t +atgaggagctcgccattgccaaggctacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaacttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaggggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaggtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggttggtttggaaagctggaccaaagctca +atttttaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcagggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgtttccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------tgccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcagcttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaagctttggactggaacggg +acaagatactgggctcccgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagccaatctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------ttttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>LC646332.1/1-7480 |Norovirus GII.2 Hu/GII.2[P16]/1192F/Tokyo/2020/Japan genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgctaccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatataaaggtgagagagttgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcagtcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaataggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------attagatactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacttacgcacaggcgtgcgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgatcatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgctgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---ttcccagtatccatagaccagatgtacaccagccctaatgaaattatatcagtacagtgtca +aaatggtaggtgcacattggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctatgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC646333.1/1-7478 |Norovirus GII.2 Hu/GII.2[P16]/1047F/Tokyo/2020/Japan genomic RNA, nearly complete genome +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactatgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagacctcgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggatatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccagatcatctacggcggttccacgtatgatcttgaatctgatg +gcaagggcagagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtaaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaacgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttattgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gattatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtatccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccagtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtggctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gggtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggct-----cctcacatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgttaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC644992.1/1-7417 |Norovirus GII.17 Hu/GII.17[P17]/1379F/Tokyo/2021/Japan genomic RNA, nearly complete genome +---------------------------------gcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggacctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggtt +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +ggttctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccaggggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgataagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctttccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcccgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtca---atgacgatgatg---------accacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggtgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctcctttctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttggcat-- +----------ctggct-----cttctagtaa---------tgcttcttccgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttgacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacaca------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC644993.1/1-7501 |Norovirus GII.4 Hu/GII.4[P31]/1503F/Tokyo/2021/Japan genomic RNA, nearly complete genome +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttttcggactgcctgagctcaccaccgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagagacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggctttttcaggccgtaccaggattggaacaggaaacccct +ccctactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaagggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagcggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggtgcaaaagaattcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtctttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtctatggtagggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccccagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagtaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagccggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacattcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggtccggcattctacagcaaagtt +agcaaattagttattgcagagttgaaggaaggaggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgaggccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtactcctaggcaccacccaactgtctcctgtcaacatctgcgcctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaactccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagctcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggagcggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgta--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ606678.1/1-6009 |Norovirus GII isolate 3036 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, partial cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacggc +a------ac----aacgacatcgtaaaatcttcaagtgaca---------------atgtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacctaacgg------ggaggatgaattagtggtt +tcttacagcg----------ccaa---agacggcatttccggattgcctgatcttaccactgtcagccaacc +ggaagaaaacaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggcatagtggagtccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccactttgagagcctgtaaagatcttggagcgtacggactggaaattttaaaattagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaagataaagacagcttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaactctcttcttgcacgaatcgccgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaggaagatcgcagcctccctcgcaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cactggctccacagggtggttttgacaagaacggcaataccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagctctcactaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttccggttggg +ggttctgggtttcac-ccagtttgttcatcacatcaacacacgttataccccaaggtgcaaaagaattcttt +ggagttcccattaaacaaatccaaatacacaagtctggagagttctgcagattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctggaggaaggagccccagaaggcactgtcgccaccctgctcataaaa +aggcctacaggtgagctcatgcccttggcagccaggatgggcacacatgcaaccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacagggtccaacgccaagaacatggatctcggcactacacct +ggtgactgcggttgtccctacatctacaaacgcggcaacgactatgttgtcataggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagtgctccgaaactcagcaccaagacgaaa +ttctggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccttccggggtgccttgcacctcccaatggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatctgagacaatgataccacactct +caaaggcccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcaccatgttcccccatat +agtagtggatgttaggcaattagaccctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctttatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatctcactcaca----------- +-----------tcgcaaa------------------------------------------------ta---- +-------gtcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacagttatga--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305511.1/1-7528 |Norovirus GII isolate PNV001501 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aattctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcctaaaatactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtgattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgagttctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaagcccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttattacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgctcttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcttt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatccctcctacataaagctaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgattatggaatgggtaaccctgtcaa +agatgccttaacactacaagaattagctgacacatgcccagttactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggactatttcaaacaagacttttcccatataaagctga +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatctctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggacgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaagaccg +ccttaagagatgtgaggttcaatgagtgtgaaataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtcccagactgcaaatgaagtgggctcagcac +tccttagacttagacaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcagatgacactaggagtgtggact +acaatgagaggcttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggtttccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctccagaaggtactgtctgttctattctcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggggaggcagtccttgagggaaatgaa +aaccttggcacttactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagggaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgat +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccacac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcagaccttggtacgatgatcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatagccctcccatgcagagtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggacctcttggcgcccagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggcctttcaccagacgttgtccaagcccattcctgtttt +tcattctatggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagagggcccaatcatgaaaacccatacgagagcatggttccccattcc +cagcgagccacccagctcatggcccttcttggtgaggcttcactgcatggtccccagttctacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggcgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaatcttgaattgggcccagaactaaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacatttccccgtggacaatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattttt +agtcccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---ttcccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------ggaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------accacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggcacagtgttcggagtggctagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tactgattt---taatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ctaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacggatccttttcttcaggtctgtagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaaccctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcattaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaacaagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaatataaagcaggggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcacactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtatagctccccttcctctgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-cttcctct---t-cc-ccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305512.1/1-7505 |Norovirus GII isolate PNV010077 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gattgttttctaacat +gtctgtcactcttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +atctctaa---------------accgccaagaccgccaacaccggaattggtg-------aagataatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtatctgggctgcctgacttaacaacagtcacgcagcc +tgatgcacgatgtacagcctatagcgtccccccgctcagtcaaagagaggcgggtgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctatcattatgggttgtacgtggagcgtggccttgt +gcttggggtgcacaaaccacccgctgcgataagcctcgctaaaattgagttaacaccattgtctctttattg +gagggttgtttacactcccc---agtacttaatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttttggaccttaatgattcttggct +cag---caggagaatgattcaaaggaccactggtttcttcaggccttaccaggagtggaacagaaagccatt +accaaccatggacgagcccaagatcaagaaagttgcaaacgctgtcctatgtgctctctcttcactcttcac +cagacccattaaagacatcatcggcaagctaaaaccaatgaacatccttaacatactggcaacttgtgactg +gacatttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgatcgctcccttgctcggtgatttcgaaatgcagggccctgaagatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacgctcagggcttgtaaagatctaggggcttatggattggaaatactcaaattagt +tatgaaatggttcttccctaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagaccttgaggcaatagaaaacaaccatatgaccactcttctcaaggacaaagacagtcttgccacata +catgagaaccctcgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaaggattgcagcagcccggtcactagtccacaaagcaaaagaagagct +gtcaagcagacaaagacctgttgtcgttatgatatctggcaggccgggcatagggaaaactcacctagccag +agagctggccaagaaagttgcatcaacactggcaggtgaccaaaggattggcctggtgcccaggaatggtgt +ggaccattgggatgcctacaaaggagaaagagtggtgctgtgggacgactatggcatgagcaaccccataca +ggatgccctaagactccaagaactggctgatacctgccctctaacacttaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagcgatgccataataataacaaccaacctctcgaatccagcacccttagactatgt +taacttcgaggcctg-ctccaggcgcatagacttcttagtatatgcagatgcgccagatattgagaaggcca +aacgagatttccctggccagccagacatgtggaaagaccattacagaccagacttctcacacatcaagctcc +aactggccccacagggcggttttgacaagaacggcaacaccccacacggtaagggtgtgatgaagtccttga +ctgttgggtcattgatcgccagagcctctggcctgctccatgaaagaatggatgaatttgagctacagggcc +ctggtctgtcaactttcaactttgaccgcaacaaggtcgctgcctttagacaactggcagctgaaaataagt +atggcatgttggacacactgagagtaggaaaccagctaaagggtgtcaaaaccatggatgagctgaagcgag +ccatcaataacatcaccatcaagaagtgcttgatagtgtataatggatgcacctacactatggaatctgatg +gacgtggtaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaatgagcttgcgggggccc +tgcaccacctcaggtctgcaagaataagatactatgtcaagtgtttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgcatga------atatctcaaacctatggt +cgaagccacctgctgaagacaatgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgtcgattccaaagacatcaaagtggaaggaaagaaaggcaagaaca +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagaatatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaagagtatctccaagatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggccaaaatccgccaga +ggatcttccgtcctaccaggaaacaacggaaggaggagagagtcaccctcggactcgtcacggggtcagaaa +tcaggaagaggaacccggatgacttcaaaccaagaggaaaactgtgggctgatgatgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagttaattttggttcaggctggg +ggttctgggtgtccc-caagccttttcataacctcaacccacgtgataccgaaggggatcacggaggctttt +ggtgtgcccatcaatcaaatacaaattcacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttagaagaaggtgcccctgagggaaccgtcgcaaccatccttgtcaaa +cggccgacaggggagttgatgcccttggctgctagaatgggaacccatgccacaatgaagatccaagggaga +atggtgggtggtcagatgggcatgttgctcaccggctcaaacgccaagggcatggacctcggcacaacacca +ggtgattgtgggtgcccttacatatacaagagaggcaacgactttgtggtcatcggcgtacacaccgcagca +gcacgtggaggcaacacagtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggagac +aacaagggtacttactgtggagcccctatcctgggtcctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggagatcttccaatgcaccactcccaccaggcacctatgagccagcgtacctaggtggaaaagaccca +cgagtgaaagggggtccgtccttgcaacaagtcatgagagatcagctcaagcctttcactgaacccagaggg +aaaccaccaaacccaagtattctggaatctgcaaagagaaccatcatcaacgttttggaacaaactattgac +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacttccagcggttacccacat +catgtccgcaagaatgactactggagtggtgagacattcacaggtaaactggcagatcaagcttcaaaggca +aatcttatgtatgaagaaggaaaacacatgacaccggtgtacaccgcggccctcaaggatgaactagtcaaa +actgacaaaatctatggtaagatcaagaagaggctactgtggggttctgacctttccaccatgatccgatgt +gctagggcattcggtggcctcatggaagaactcaaagcacactgcatcacccttcctgtcagagttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacaactaccattatgatgcagactac +t-cccgttgggattccacacaacaacgggcggtgcttgcgtcagcacttgaaatcatgg-tgagattttctg +ctgagccacaatt-agcgcaaaaagtggctgaggacctgctttcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgagggccttccatccggcgtgccatgcacgtcccagtggaactcaatctcccactgg +ttgctcacattgtgtgccttatctgaggtgacaggactaggtcctgacatcatacaggccaactccatgttc +tccttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaagttaactgcaaagctc +agagagtatggcctcaagcccactcgtcctgacaaaactgaggggccattggtgattagtgaagacttaaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctct +atcctcaggcaattgtattggacaaaaggacccaaccatgaagaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactgggagaatcctccctacatggaccctcattttatagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctagaaccagtggctggtgcagctcttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtttcacctaggaattccccagg +agaaatcctcctaaatttagaattaggtcctgacttaaatccctatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcagggaatgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaattttccagtcgaattcttaagtcctgcccaaattactatgctcccacattt +gatagttgacgtcaggacccttgaaccaattatgatacccctccccgacgtgagaaacaccttcttccatta +caacaataggccctct---gagcgtatgcgtttggtggccatgttgtacacacccctgagatccaacggctc +aggtgatgacgtcttcacagtttcatgtagagtgttaactagacccactccagattttgaattcacctacct +agttccaccctcagtagagtctaagacaaagcctttctctcttcccatcttaaccatttctgaattgactaa +ttcaagg---tttccagcacccattgattcattgtttaccgcccaaaataacaatcttaatgtccaatgtca +aaatggtcggtgcacactagatggtgagttgcagggaaccacccagctgctcccaactggaatatgtgcctt +cagag-----------------------------------------ggaaaatatcagcag----------- +-----------atgtggaaa------------g---------------------------------ca---- +-------gccacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggcaccccatttgatccaacagatgatgtcccagc +tccgcttggcactcctgacttcacaggtctactgtttggagttgcaagccaaa---gaaacgttggt----- +------------ggaacaggtaacaacaccacc--------agg-----------gcccacgaggtagtgat +agcaacaactagtacacaatttgtgccaaaattgggttctattaattttggg------------agtgaaag +tgacgattt---tcaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aaattgaaaccg---------ggcatccttttagacaatgggacctacctaa +ctattctggagca-ctgacc------ctcaacatgaaccttgctccacctgttgccccaaacttcccaggtg +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------tagtg--------- +--agggtattattgactgcctgctgcctcaagagtggatacaacatttctaccaggagtccgctccatccca +atcagatgtggcactgatcagatatgtcaaccctgacacgggccgcactctctttgaggcaaaactccacag +gactggttatattactgttgctcactctggtgattatcctcttgttgttccttctaatggctattttaggtt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcacctctgctgta +ggctcactggcgaatgctgg---agcaaatgccataacacagaaaattgactttgaaaacaacaaacaa--- +------------------------------cttcaagcagcctcctttcaacatgataaagatatgctccgc +gcacaagtggatgcaactaaacagctgcaggcagaaatgattgccatcaaacaggggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggagcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttactccgggcagttcacaccgacg--------- +cc--------------tgtgcacataccaaattttaac---------------------------------a +gt----a----------------aacccaggcctcc---tgccaa--------------------------- +------------------------------aacccagccttcttcttcttcttctggt------------ag +t--gttta-----------tagcc------------tt-------tcaacccaatcaacttcactc---c-- +----------ctggac-----cttcttcttcaggttcatctgtttcttctgtctcaacacaatcaacaaaat +tgagttc--------------------------------------agtttctt------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gaaccttagcccttacatga---gcggggcccttaatatttctcatgtgacacctccatcaagcag +ggcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tagttt---taat--tgg---------------------------------gttaaacttt +aattg------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305513.1/1-7475 |Norovirus GII isolate PNV011941 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagaactggtt-------aaagcaatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaccaatcatt +tcttacaacg----------tcaa---agagggtgtttctggtctgcctgaactctcaactgtcattcaact +ggaagagagttctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatttaccattatggcttatacgtggaacgaggattagt +actaggtgtacacaaaccaccagcagccatcagccttgccaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggactacaggctttttccgaccctatcaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcctttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggttcttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactttcaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +tgacgccctcagactccaggagcttgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggcaaagtctttgatagtgacgccataataataaccaccaacctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttcacacacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaaaaccctca +ctgccagttcyctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcaacttgccgctgaaaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaaaaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gtaaaggtaatgtgcgtgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtattatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgtcatctcctctgatgacatcaaaaccgagggcaaaaaaggaaagaaca +aaactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +aaagaatcagggaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagagcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaaacccaaagggaaaccatgggccgatgatgacaggagtgttgact +acaatgagaaactcagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagctcttt +ggagtgcccatcaaacaaatacaagttcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagacgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggagctcatgcccttggcagccagaatgggcacccacgcaaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggttattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcagcaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtgtacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattat +t-cccgctgggactcaacacaacaaagagcagtgctagctacagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaattaacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaggatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcagacagctggaaccagtyaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaatattgttgtccagtgtca +gaatgggcgcgtcactcttgatggtgagttgatgggcactacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gctagtgatcaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatactacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcattagagatttct------------actgaatc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcaactccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatatcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcataactatagccaagaatggtgactctccaataaccgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +aattc---------aataatggctggagcttttatagcaggattggctggtgacatgttcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgtgcacagatctacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtggatcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgttcgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgtctaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-t------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305514.1/1-7459 |Norovirus GII isolate PNV008798 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttctgataaagaagaggt------tggtgcattctccaatat +taaagttggattcaagaaaa----tgctgggtgtcgtccccaaggggacc-------------aaagcaccc +aatagtga----------------gcagcactgccccacagttaagatcgggaccagaacactagcggttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcagaaactgtgcgtgggttaccagacctaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggaacacagaccagccactgagccgct +tcctggaacaatactagagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +cctaggggttcacaagcccccagcagcaataagcctcgcgacgatagagctcacccccatatccctttactg +gagacctgtttacaccccca---actacctggtctgcccagacacgctgaagggccttgctggtgagaagtt +tccctatacagccttcagtaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagattaaaaaggtggctaatgcaatcctctgtgctcttggatcactgttttc +aaagccaatcaaagacctgttgggcaagcttaaaccactgaacttactgcacctgctcgcatcatgcgactg +gacgtttgcgggtgtagtggagacagtcatactaatggcggagcttttc---aacgtcttttggacaccgcc +agatgtctccaacttcatagcctccctgataggtgattttgaattgcaaggtcctgaggacctggctgtgga +gcttgttcctgtggtcatgggtggcataggaatggtcctcggcttcactgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacctaggaaactatgcacttgacatactcaaacttgt +tatgaagtggttcttcccaaagaaagaggaaaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctggacatggaagccatagggaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggacttggaagaggagaaggcgaggaaactgtccaccaaatcgtcctcgccagacatcgt +tggcactatcaacgccatactggccaggatagctgctgccagatccctcctacacaaggccaaagaagaaat +gttcagcaggatcagaccggtggttgttatgatctcaggcaggcctggcattggcaaaacccatatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccgcgcaatggggt +cgaccactgggacgcctacaggggagagagggtggtcttgtgggatgactatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccggtcaccctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcattataatcacgaccaatctagtcaacccggcgcccctcgactatgt +gaacttcgaggcgtg-ttctagaagggttgactttttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccccggtcaacctgatatgtggaaggaccattttaagccagacttctcccatataaagctga +ctctagccccccaaggcggatttgacaagaatggcaacaccccgcatggcaagggcaccatgcgatctctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagtttcagctccaaggga +acgacctccaaatatacaactttgacaccaacagagtctccgcatttaggaaactggccgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcggcactcaagaatgtcaagactttggaagatctgaaagttg +ccctgagggatgtgaagttcaacgagtgtgaaataatttacaagagctccaaatatcgcgtctcttccaacg +gtaaaggttctgtctctgttgataaggttgaggaccaagcatcccagactgcaaatgaggtgggttcagctc +ttcttagactcaggcaagcaagggccagatactacgtcagctgctttcaagacctcgtctacacgctaatac +aggttgccggagcgtcattcgttgtta---------------acagga------tctccaagaggttttgtt +gggagagatgggtcaaaccgaccgagac-------------ccaggaaacgagtgactccga-----aaagg +aagcagcccaaggta---gatgggagatcgaacccaaggacacagagccagagggtaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctccagcaagggcctgagtgatgaagagtatgacgagttta +agagaattagggaagaaaggaacgggaaatactccattgaggaatacctgcaagatcgggaccgctac---t +atgaggaggtggcagtcgcccgggcaacagaggaagacttctgtgaagaggaggaggccaagataaggcaga +gaatcttccgccctacaaagaaacagaggaaggaagaaaggggggtgcttggtctggtcactggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaacctgtgggcagatgacaccaggagtgtggact +ataacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccactgggcactggatggg +gcttctgggtctcat-ccaacctcttgatcacgacaacacacgtcctgcctaaagggattaaggaacttttt +ggggttgaaatcaaacagatccaaatccataagtctggagagttttgcaggttcaggttcccaagaccaatc +aggccagatgtcacggggctcgtgttggaggaaggtgccccagaaggcactgtctgttccatactcgtaaag +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggtaga +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccctacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccacacaggggcaagatggggaggcagtccttgagggaaatgaa +aaccttggcacttattgcggtgccccaattttgggtcctggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgctcatcaccagacgctttgccgccaggcacttatgaacctgcctacctgggaggcaaggacccc +agagtagagaaagggccatccctgcagcaagtcatgagagatcaactaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacttactcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaacggagaatccttcaccggcccccttgcagatcaagcatccaaagcc +aaccttatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagacgagcttgtcaag +accgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagttgtatagccctcccatgcagggtgggaatg +aacatgaatgaggatggtcccatcatatttgacaaacactctaagtacaggtaccactatgacgcagactac +t-ccaggtgggattcgactcaacaaaggagcattctcacagccgccatggaagtgatgg-tgcgattctctg +ccgaaccagaact-ggcacaagtggttgcagaggaccttctggctcccagtcaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcgggggtcccatgcacatcacaatggaactcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcgttttacggcgacgatgagatcgtcagcactgatatcaatcttgaccccatgaagttaacacagaaactc +agggagtatgggctggtccccacccgacctgacaaaactgaaggtcctctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcgattgcacgagacccagctgggtggtttggaaagttggaccaagactca +atccttaggcagttatactggacaaggggccccaaccatgagaatccatacgagagcatggtccctcattct +cagcgggccacacaacttatggcccttcttggtgaggcttcgctgcatggtccccagttttataagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggtgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcagctccatcgag---tgatggcgcggccggcctcgtcccagagatcaatcatga +ggttatggcaatcgagcctgtcgcaggtgcatcaatcgctgctcctgtggtgggacaacaaaatattattga +tccctggataagaaacaattttgtacaggcacctgctggagaatttactgtttcccctaggaatgccccagg +tgagttcttgcttgatttagaattaggtcctgatttgaacccctatctggcacatttggcaagaatgtacaa +cggtcatgcgggtggtatggaagtgcaaatagtactagctgggaatgcgttcacagc---tggtaaaatcct +gttcgccgtcataccgcctggatttccgtatgaaaacttgtccccagcacaactcacgatgtgcccccacgt +cgtggttgatgtaaggcagcttgagcctgtcatgctgcccatgccagacattaggaatacattctttcatta +taatcaagatggtggg---ccaaaattgaggttgattgctatgctgtatacccctctaagagctaataattc +aggtgatgatgtgttcactgtttcctgtagggttcttacaaggcctgcccctgattttgaatttacattttt +agttcccccctctgttgaatcaaagactaaggcattcaccatcccagtgcttaaaatttctgaaatgactaa +ttcaaga---ttccctgtaccagttgaccagatgtacaccagcaggagtgaggggatcgtggttcaacctca +gaacggtagggccacaattgacggagagctacttggcactactctcgtctctccagtctctgtgtgcaattt +caagg-----------------------------------------gaaacttgcaaactgag--------- +----------gtcccagg------tga-ac------------------------------------------ +-----------------------------------------------gccagctt----------------- +----------taccaactgcagctgaccaacctcgatggttcacctatcgaccccactgatgacacacctgg +gccactaggctgtccagacttcactggcctcctctacggggttgccagccagc---gtggtccaggtga--- +--------------------------cactacg--------cgg-----------gcccatgaggcacggat +tgacaccggcaatggtacttatgctcccaaaattggtcaggtcaggtt---ct---------attcaacttc +aaacaattt---tgaagtaaaccaacccacac---------------------------actttaccccag- +--------tgggaatctatattgagggcaatt---------cttctgattttaatcaatggcaactccccag +gtatgggggtcat-ctagct------aataacaaccatttggcacccgcagtttctcccctttttcctggag +agcaaattcttttctttagatctttcatcccag------gagccagtggtca------cacaa--------- +--atggagagatggattgtctcctgcctcaggagtttgtgcagcacttctaccaggaagcggcaactgcgca +gtcagaagtggccttactgaggtttgtcaaccctgacactggaagggttttgtttgagtccaaactccacaa +gcaaggattcatgacaattgcaagttcaggtgatcatcccatcatcatgccaactaatggttattttagatt +tgaagcttgggttaaccaattttactctctcgcccctgtgggaactggaagtgggcgcaga---------ag +gatcc---------aataatggctggagcttttatagcaggattggccggggacgttctgtcctctggcgtt +ggttcgctagtcaacgcggg---ttccaacgctatcaaccaaaatgttgaatacaatttcaacaggcaa--- +------------------------------ctccaggaagcatctttcaaacatgataaggaaatgctcaat +gcccagattgctgcgacaacgcagctgcaaaaagacataatggcaataaagcagggggttttgtccgctggc +ggcttttccccaactgatgccgcgagaggttcagtgggggcccctatgaccaaaatcttagattggaatgga +tcaagatattgggctccaaattcaatgaggaccactggctactctgg-caacttcact----tcccaaggtg +tt-----------aggcaagtgtttcagcc----tcaaggcact---------------------------c +ttaac-----------------ccaagtactttgaag----------------------------------- +----------------------------------------------------------------------aa +tgttcccaaggctccctcctcagta-----agttctcttagcacccaatctaccc----------------- +---------------------aatcaacaaa---attaagtggctccacag-------cagg--------aa +cc--------------------------------------tctattccctcat---------ccaga---ac +cactac-------------------act--------------ttcaagaaccagtgagtgggtgagaggaca +gaatgaaagacttagccctttcatga---gtggcgcgctacaaacaacgttcgtgacgccaccatcaagcaa +gtcttct---tctg------------------------------caggga---cagtctcgaccgtccctaa +ggaggttttgga-ctcctggacgcctgtct------------tcaatacacgcaggcagccactcttcgccc +acgttcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagaatg-------- +-------att-tgaa--------------------tttgatt------ct-ctattctg---t---tc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305515.1/1-7525 |Norovirus GII isolate PNV005297 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagcg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttattctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtactggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccccgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaacgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaagacccatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgactttctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaggtctgatttctcacacataaaattgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggtc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaaaaagtgtcagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgcgtccaggaggccctgtattctatcattc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaagctatgggctgacgatgacagaagcgtggact +acaatgagaaactcagttttgaggccccaccgagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgactgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttctcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatctatggtaagatcaagaagagacttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtatagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcaactgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaaaccacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgagaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcacttcacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggctagaatgtataa +tggttacgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcctagccaggtcactatgttcccccactt +aatagtagatgttaggcaattggaacctgtgttgatccctttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccatcaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaaccaaaccatttactgtcccaatcctaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgcttactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcgaaa---------ctgatacaga +aagtgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgaagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +caacaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccta +gcacaaattgaggccactaaaaagttgcaacaagaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggtacact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatttt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305516.1/1-7452 |Norovirus GII isolate PNV011337 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaac +g------ac----agtaccaacaccgccccttctgataaagaagaggt------tggtgcattctccaatat +taaagttggattcaagaaaa----tgctgggtgtcgcccccaaggggacc-------------aaagcaccc +aatagtga----------------gcagcactgccccacagttaagatcgggaccagaacactagcggttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagttcgatg----------cgaagtcagaaactgtgcgtgggttaccagacctaacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggaacacagaccagccactgagccgct +tcccggaacaatactagagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +cctaggggttcacaagcccccagcagcaataagcctcgcaacgatagagctcacccccatatccctctactg +gagacccgtttacaccccca---actacctggtctgcccagacacgctgaagggccttgctggtgagaagtt +cccctatacagccttcagtaacaactgttacaacttctgttgctgggtgcttgagctcaacgacacgtggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaactgttgatgatggaaagatcaaaaaggtggctaatgcaatcctctgtgctcttggatcactgttttc +aaaaccaatcaaagacctgttgggcaagcttaaaccactgaacttgctgcacctgctcgcatcatgcgactg +gacgtttgcgggtatagtggagacagtcatactaatggcggagcttttc---aacgtcttttggacaccgcc +agatgtctccaacttcatagcctccctgataggtgattttgaattgcaaggtcctgaggacctggctgtgga +gcttgttcctgtggtcatgggtggcataggaatggtcctcggcttcactgccgagaagataggccgcatgct +gtcgtccgccgcatcaacactgcgggcatgtaaagacctaggaaactatgcacttgacatactcaaacttgt +tatgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctggacatggaagccatagggaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctggacttggaagaggagaaggcgaggaaactgtccaccaagtcgtcctcaccagacatcgt +tggcactatcaatgccatactggccaggatagctgctgccagatccctcctacacaaggccaaagaagaaat +gttcagcaggatcagaccggtggttgttatgatctcaggcaggcctggcattggcaaaacccatatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccgcgcaatggggt +cgaccactgggacgcctacaggggagagagggtggtcttgtgggatgactatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccggtcaccctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcattataatcacgaccaatctagtcaacccggcgcccctcgattatgt +gaacttcgaggcgtg-ttccagaagggttgactttttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccccggtcaacctgatatgtggaaggaccattttaagccagacttctcccatataaagctga +ctctagccccccaaggcggatttgacaagaatggtaacaccccgcatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagtttcagctccaaggga +acgaccttcaaatatacaactttgacaccaacagagtctccgcatttaggaaactggccgcggacaacaagt +atgggatcatggaaacaatgagagtgggtgcggcactcaagaatgtcaagactttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgaaataatttacaagagctccaaatatcgcgtttcttccaacg +gtaaaggttctgtctctgttgataaggttgaggaccaagcatcccagactgcaaatgaggtgggttcagctc +ttcttagactcaggcaagcaagggccagatactacgtcagctgctttcaagacctcgtctacacactaatac +aggttgccggagcgtcattcgttgtta---------------acagaa------tctccaagaggttttgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgactccga-----aaagg +aagcagcccaaggta---gatgggagatcgaacccaaggacgcagagccagagggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctccagcaagggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaaggaacgggaaatactccattgaggaatacctgcaagatcgggaccgctac---t +atgaggaggtggcagtcgcccgggcaacagaggaggacttctgtgaagaagaggaggccaagataaggcaga +gaatcttccgccctacaaagaaacagaggaaggaagaaaggggggtgcttggtctggtcactggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaacctgtgggcagatgacaccaggagtgtggact +ataacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccactgggcactggatggg +gcttctgggtctcat-ccaacctcttgatcacgacaacacacgtcctgcctaaagggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacggggctcgtgttggaggaaggtgccccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtaga +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccctacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccacacaggggcaagatggggaggcagtccttgagggaaatgaa +aaccttggcacttactgcggtgccccaattttgggtcctggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgctcatcaccagacgctttgccgccaggcacttatgaacctgcctacctgggaggtaaggacccc +agagtagagaaagggccatccctgcagcaagtcatgagagatcaactaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacttactcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaacggagaatccttcaccggcccccttgcagatcaagcatccaaagcc +aaccttatgtatgaacaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagacgagcttgtcaag +accgataagatctacaaaaagataaagaaaaggctcttatggggttcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggacagcatgaaggcaagttgtatagccctcccatgcagggtgggaatg +aacatgaatgaggatggtcccatcatatttgacaaacactctaagtacaggtaccactatgacgcagactac +t-ccaggtgggattcaactcaacaaaggaacattctcgcatccgccatggaagtgatgg-tgcgattctcag +ccgaaccagaact-ggcacaagtggttgcagaggaccttctggctcccagtcaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcgggggtcccatgcacatcacaatggaactcaatagcacattgg +atcctgactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcaccgatatcaatcttgaccccatgaagttaacacagaaactc +agggagtatgggctggtccccacccgacctgacaaaactgaaggtcctctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcgattgcacgagacccagctgggtggtttggaaagttggaccaagactca +atccttaggcagttatactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattct +cagcgggccacacaacttatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggtgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcagctccatcgag---tgatggcgcggccggcctcgtcccagagatcaatcatga +ggttatggcaattgagcctgtcgcaggtgcatcaatcgctgctcctgtggtgggacaacaaaatattattga +tccctggataagaaacaattttgtacaggcacctgctggagaatttactgtttcccctaggaatgccccagg +tgagttcttgcttgatttagaattaggtcctgatttgaacccctatctggcacatttggcaagaatgtacaa +cggtcatgcgggtggtatggaagtgcaaatagtactagctgggaatgcgttcacagc---tggtaaaatcct +gttcgccgtcataccgcctggatttccgtatgaaaatttgtccccagcacaactcacgatgtgcccccacgt +cgtggttgatgtaaggcagcttgagcctgtcatgctgcccatgccagacattaggaacacattctttcatta +taatcaagatggtggg---ccaaaattgaggttgattgctatgctgtacacccctctaagagctaataattc +aggtgatgatgtgttcactgtttcctgcagggttctaacaagacctgcccctgattttgaatttacattttt +agttcccccctctgttgaatcaaagactaaggcattcactatcccagtgctcaaaatttctgaaatgacaaa +ttcaaga---ttccctgtaccagttgaccaaatgtacaccagcaggagtgaggggatcgtggttcaacctca +gaacggtagggccacaattgacggagagctacttggcactactctcgtctctccagtctctgtgtgtaattt +taagg-----------------------------------------gaaacttgcaaactgag--------- +----------gtcccagg------tga-ac------------------------------------------ +-----------------------------------------------gccagctt----------------- +----------taccaactgcagctgaccaacctcgatggttcacctatcgaccccactgatgacacacctgg +gccactaggttgtccagacttcactggcctcctctacggggttgccagccagc---gtggtccaggtga--- +--------------------------cactacg--------cgg-----------gcccatgaggcacggat +tgacaccggcaatggtacttatgctcccaaaattggtcaggtcaggtt---ct---------attcaacttc +aaacaattt---tgaagtaaatcaacccacac---------------------------acttcaccccag- +--------tggggatctatattgagggcaatt---------cttctgattttaatcaatggcaactccccag +gtatgggggtcat-ctagct------aataacaaccatttggcacccgcagtttctcccctttttcctggag +agcaaattcttttctttagatctttcatcccag------gagccagtggtca------cacaa--------- +--atggagagatggattgtctcctgcctcaggagtttgtgcagcacttctaccaggaagcggcaactgcgca +gtcagaagtggccttactgaggtttgtcaaccctgacactggaagggttttgtttgagtctaaactccataa +gcaaggattcatgacaattgcaagttcaggtgatcatcccatcatcatgccaactaatggttattttagatt +tgaagcttgggttaaccaattttattctctcgcccctgtgggaactggaagtgggcgcaga---------ag +gatcc---------aataatggctggagcttttatagcaggattggctggggacgtcctgtcctctggcgtt +ggttcgctagtcaacgcggg---ttccaacgccatcaaccaaaatgttgaatataatttcaacaggcag--- +------------------------------ctccaggaagcatctttcaaacatgataaggaaatgctcaat +gcccagattgctgcgacaacgcagctgcaaaaagacataatggcaataaagcagggggttttgtccgctggc +ggcttttccccaactgatgccgcgagaggttcagttggggcccctatgaccaaaatcttagattggaatgga +tcaagatattgggctccaaattcaatgaggaccactggctactctgg-caacttcact----tcccaaggtg +tc-----------aggcaagtgtttcagcctg-ttcaaggcact---------------------------c +ccaac-----------------ccaagtactttgaag----------------------------------- +----------------------------------------------------------------------aa +tgttcccaaggctccctcttcagtg-----agttctcttagcacccaatctaccc----------------- +---------------------aatcaacaaa---attgagtggctccacag-------cagg--------aa +cc--------------------------------------tctattccctcat---------ccaga---ac +tactac-------------------act--------------ttcaagaaccagtgagtgggtgagaggaca +gaatgaaagacttagccctttcatga---gcggcgcgctacaaacaacgttcgtgacgccaccatcaagcaa +gtcttct---tctg------------------------------taggga---cagtctcgaccgtccctaa +ggaggttttgga-ctcctggacgcctgtct------------tcaacacacgcaggcagccactcttcgccc +acgttcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagaatg-------- +-------att-tgaa--------------------tttgatt------ct-c-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305517.1/1-7487 |Norovirus GII isolate PNV008216 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gattgttttctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +atctctaa---------------accgccaagaccgccaacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtctgggctgcctgacttaacaactgtcacgcagcc +tgacgcacgatgtacagcctatagcgtccccccgctcagtcaaagagaggcgggtgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctatcattatgggttgtacgtggagcgtggccatgt +gcttggggtgcacaaaccacccgctgcgataagcttcgctaaaattgagttaacaccattgtctctttattg +gagggttgtttacacccccc---agtacctaatagctccagacactttgaaggacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttttggatcttaatgattcttggct +cag---caggagaatgattcaaaggaccactggtttcttcaggccttaccaggagtggaacaaaaagccatt +accaaccatggacgagcccaagatcaagaaagttgcaaacgccgtcctatgtgctctctcttcactcttcac +cagacccattaaagacatcatcggcaagctaaagccaatgaacatccttaacatactggcaacttgtgactg +gacatttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgatcgctcccttgctcggtgatttcgaaatgcagggccctgaagatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacactcagagcttgtaaagatctaggggcttatggattggaaatactcaaattagt +tatgaaatggttcttccctaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagacctggaggcgatagaaaacaaccatatgaccactctcctcaaggacaaagacagtcttgccacata +catgagaaccctcgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaaggattgcagcagcccggtcactagtccacaaagcaaaagaagagct +gtcaagcagacaaaggcctgttgtcgttatgatatctggcaggccgggcatagggaaaactcacctggccag +agagctggccaagaaagtcgcatcaacactggcaggtgaccaaaggattggcctggtgcccaggaatggtgt +ggaccattgggacgcctacaaaggagagagagtggtgctgtgggacgactatggcatgagcaaccccataca +ggatgccctaagactccaagaactggctgacacctgccctctaacacttaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagcgatgccataataataacaaccaacctctcaaatccagcacccttagactatgt +taactttgaggcctg-ctccaggcgcatagactttttagtgtatgcagatgcaccagatattgagaaggcca +agcgagatttccctggccagccagacatgtggaaagaccattacagaccagacttctcacacatcaagctcc +aactggccccacagggcggttttgacaagaacggcaacaccccacacggtaagggtgtgatgaagtccttga +ctgttgggtcattgatcgccagagcctctggcctgctccatgagagaatggatgaatttgagctacagggtc +ctggtctgtcaactttcaactttgaccgcaacaaggtcgctgccttcagacaactggcagctgaaaacaagt +atggcatgttggacacactgagagtaggaaaccagctaaagggtgtcaaaaccatggatgagctgaaacgag +ccatcaataacatcaccatcaagaagtgcctgatagtgtacaatgggtgcacctacaccatggagtctgatg +gacgtggcaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaatgagctcgcgggggccc +tgcaccacctcaggtctgcaagaataagatactatgtcaagtgcttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgcatga------acatctcaaacctatggt +caaagccacctgctgaagacaatgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgttgattccaaagatatcaaagtggaaggaaagaaaggcaagaaca +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagaatatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaagagtatctccaagatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgcgaagaggaggaggccaaaatccgccaga +ggatcttccgtcctaccaggaaacaacggaaggaggagagagccactctcggactcgtcacggggtcagaaa +tcaggaagaggaatccggatgacttcaaaccaagaggaaaactgtgggctgatgatgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagttaattttggttcaggctggg +gattctgggtgtcct-caagccttttcataacctcaacccacgtgataccgaaggggatcacggaggctttt +ggtgtgcccatcaatcaaatacaaattcacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttggaagaaggtgcccctgagggaaccgtcgcaaccatccttgtcaaa +cggccgacaggggagttgatgcccttggctgctagaatgggaacccatgccacaatgaaaatccaagggaga +atggtgggtggccagatgggcatgttgctcaccggctcaaacgccaagagcatggacctcggcacaacacca +ggtgattgtgggtgcccttatatatacaagagaggcaacgactttgtggtcatcggcgtacacaccgcagca +gcacgcggaggcaacacagtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggggac +aacaagggtacttactgtggagcccctatcctgggtcctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggagatcttccaatgcaccactcccaccaggtacctatgagccagcgtacctaggtggaaaagaccca +cgagtgaaggggggtccgtccttgcaacaagtcatgagagaccagctcaagcctttcactgaacccagaggg +aaaccaccaaacccaagtattctggaatctgcaaagagaaccatcattaacgttttggaacaaactattgat +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacttccagcggttacccacat +catgttcgcaagaatgactactggagtggtgagacattcacaggcaaactggcagatcaagcttcaaaggca +aatcttatgtatgaggaaggaaaacacatgacaccggtgtacaccgcggccctcaaggatgaactagttaaa +actgacaaaatctatggtaagatcaagaagaggctactgtggggttctgacctttccaccatgatccgatgt +gctagggcattcggtggcctcatggaagaactcaaagcacactgcatcactcttcctgtcagagttggcatg +aacatgaatgaagatggaccaataatatttgagaaacattccagatataactaccattatgatgcagactac +t-cccgttgggattctacacaacaacgggcggtgcttgcatcagcacttgaaatcatgg-tgagattttctg +ctgagccacaatt-ggcacagatagtggctgaggacctgctctcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgagggcctgccatccggcgtgccttgcacgtcccagtggaactcaatctcccactgg +ttgctcacattgtgtgccttatctgaagtgacaggactaggtcctgacatcatacaggccaactccatgtac +tccttctatggtgatgatgaaattgtgagcactgacataaaattggatccagaaaagttaactgcaaagctc +aaagagtatggcctcaagcccactcgtcctgacaaaactgaggggccattggtgattagtgaagacttgaac +gggttaacattccttcgccgcactgtgacccgtgatccagcaggttggtttggaaaactagatcaaagctct +atcctcaggcaattgtattggacaaaaggacccaaccatgaagaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactaggagaatcctccctacatggaccctcattttacagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcagctcttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtttcacctaggaattccccagg +agaaatcctcctaaatttagaattaggtcctgacttaaatccttatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcagggaatgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccaccaaatttcccagttgaattcttaagtcctgcccaaattactatgctcccacattt +gatagttgacgtcaggacccttgaaccaattatgatacccctccccgatgtgagaaacaccttcttccatta +caacaataggccctct---gagcgtatgcgtttggtggccatgttgtacacacccctgagatccaatggctc +aggtgatgatgtcttcacagtctcatgtagagtgttaactagacccactccagattttgaattcacctacct +agttccaccctcagtagagtctaagacaaagcctttctctcttcctatcttaaccatctctgaattgactaa +ttcaagg---ttcccagcacccattgattcattgtttaccgcccaaaataacaatctcaatgtccaatgtca +aaatggtcggtgcacactagatggtgagttgcagggaaccacccagctgctcccaactggaatatgtgcctt +cagag-----------------------------------------ggaaaatatcagcag----------- +-----------atgtgcaaa------------a---------------------------------ca---- +-------gccacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaacctcaatggaaccccatttgatccaacagatgatgtcccagc +tccgcttggcactcctgacttcacaggtctgctgtttggagttgcaagccaaa---gaaacgtcggt----- +------------ggaacaggtaacaacactacc--------aga-----------gcccacgaggtagtgat +agcaacaactagcacacaatttgtgccaaaattgggttctattaattttggg------------agtgaaag +tgacgattt---tcaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgaaaccg---------ggcatcctttcagacaatgggacctacctaa +ctattctggagca-ctgacc------cttaacatgaaccttgccccacctgttgccccaaacttcccaggtg +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------cagtg--------- +--agggtattattgactgcctgctgcctcaagagtggatacaacatttctaccaggaatccgctccatccca +atcagatgtggcactgatcagatatgtcaaccctgacacgggccgcactctctttgaggcaaaactccacag +gactggttacattactgttgctcactctggtgattatcctcttgttgttccttctaatggctattttagatt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtcttacaggtgacatgctcacctctgctgta +ggctcactggcgaatgccgg---agcaaatgccataacacagaaaattgactttgaaaataacaaacaa--- +------------------------------cttcaagcagcctcctttcaacatgacaaagatatgctccgc +gcacaagtggatgcaactaagcagctgcaggcagaaatgattgccatcaaacaggggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggagcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttactccgggcagttcacatcaaca--------- +cc--------------tgtgcacacaccaaatttcaac---------------------------------a +gt----a----------------aacccaggcctcc---taccaa--------------------------- +------------------------------aacccagccttcttcttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaacccagtcaacttcactc---c-- +----------ctggac-----cctcttcttcgggttcatctgtttcttctgtctcaacgcaatcaacaaaat +tgagttc--------------------------------------agtttctt------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gagcctcagcccctatatga---gcggggcccttaatatttctcatgtgacacctccatcaagcag +ggcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tagttt---taat------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305518.1/1-7493 |Norovirus GII isolate PNV014022 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cttttggcagtcaa---aactctgtcaat +g------ac----agtattaatgccaccccttccaataaggaagaggt------tggtacattctccaatat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------aaaacaccc +agcagtgg----------------tcaacattgtcccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---acaaaa +cgaacatgaaaacaccccatacaccgttcccccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccattactccgtgtatgtcagcgatggcaaagc +cctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggccttgctggtgagaagtt +cccctacacggcctttagtaacaactgctataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcagccttggaacaggaaacccct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagatctgttaggtaaacttaagccattgaacctgctacacttgcttgcgtcatgcgactg +gacatttgcgggtgtagtggagacagtcattttaatggcggagcttttc---aacatcttctggaccccgcc +agatgtttctaattttatagcctccctgataggtgattttgagttacaagggcctgaggatctggctgtgga +gctcgttcctgtggttatgggtggcataggaatggttctcggtttcaccgctgagaagataggtcgtatgct +atcgtccgccgcatcaacattgcgggcatgcaaagacctaggaaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctggacatggaagctatagggaataaccatctcacgaccctccttaaggacaaagacagccttacggcttt +tatgaagaccctggacttagaagaggaaaaagcaaggaaactgtccactaagtcatcttcaccggacattgt +tggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggattagaccagtggtcgttatgatatcaggcagacctggcattggcaagacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccacgtaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttatgggatgactatggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaagcgtg-ttccaggagagttgacttcttggtatatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttggccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +gtgacctccaaacatataattttgacaccaacagagtctccgcattccgaaaactggctgcagataacaagt +atggtatcatggagacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaatgaggtacaatcagcac +ttctcaggcttaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtaaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgatgagtaca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcaacggaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaatcttccgcccgacaaagaagcaaaggaaggaggaaaggggtgtacttggattagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccactaggcactggttggg +gtttctgggtctcat-ccaaccttttgatcacaacaacacatgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaga +agacctacgggtgagatgattcccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgtcggcggccagatgggaatgcttctaacaggagcaaatgcaaagaatatggatctcggcaccggccct +ggtgactgcggttgcccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccataccgcagca +gcccggggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggcaaggcacctaaactaagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcagagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttaagacccttcacagaacctagggga +aaaccacctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccatggtcctactcgcaagcatgtgcctcactggacaaaaccacttccagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggaatccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gctagggcttttggtggtctcatggacagcatgaaggcaagctgcatagctcttccatgtagggtaggaatg +aacatgaatgaagacggccctatcatatttgacaaacattctaagtacagataccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggaacgttctcactgccgctatggaagtgatgg-tgcggttttctg +ccgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagccagcttgatgttggtgatttt +atcatctcagtccaggagggtctgccatccggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttatccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctt +agggagtacggcctggtccccacccgacctgataagactgaaggtcccctcgttataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggactagggggcctaaccatgagaacccgtacgagagcatggtccctcattcc +cagcgggccacacagcttatggccctccttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggtcagcagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttttgccaatgccagacataagaaatgttttctaccacta +taatcagaacaatagt---cccaaacttaggcttgtagctatgctttatacccctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacttttct +ggtcccacctacagttgagtctaaaactaagaatttcaccctccccgttcttagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacaactgacggtgagctgcttggcactaccatcttacagtctgtgtctatttgcaactt +taaag-----------------------------------------gaacaatgcaggcaaaga-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattacaactcaccaacttggatggttcacctatagatccaacagatgatatgcctgc +ccctcttggcacgccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgatt---ca---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggaccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagccccagctgtgacaccactctttcctggtg +agcagattttgttctttaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtggatagagcacttctaccaggaagcggccccttccca +atctgacatcgcactggtaaggtttatcaaccctgacacaggaagagtgctctttgaagctaaattgcacaa +acaaggtttccttacaattgcagcatctggagatcaccccattgtgatgcctactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagtcagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccctagctccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaaat---------------------------------- +-------------------------------------tactaagacttcaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaataacgctgtctg-------cagg--------aa +cagggtc----a---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------at-tctccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305519.1/1-7493 |Norovirus GII isolate PNV015015 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cttttggcagtcaa---aactctgtcaat +g------ac----agtattaacgccaccccttccaataaggaagaggt------tggtgcattctccaatat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------aaaacaccc +agcagtgg----------------tcaacattgtcccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcagaaactataatcgggctgccggacttgacaacggt---acaaaa +cgaacatgaaaacaccccatacaccgttcccccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccattactccgtgtatgtcagcaatggcaaagc +cctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggccttgctggtgagaagtt +cccctacacggcctttagtaacaactgctataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaaacccct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagatctgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggagcttttc---aacatcttctggaccccgcc +agatgtttctaattttatagcctccctaataggtgattttgagttacaagggcccgaggatctggctgtgga +gctcgttcctgtggttatgggtggcataggaatggttctcggtttcaccgctgagaagataggtcgtatgct +atcgtccgccgcatcaacattgcgggcatgcaaagacctgggaaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcaatcgaggatgccgt +cctggacatggaagctatagggaataaccatctcacgaccctccttaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagcgaggaaactgtccactaagtcatcttcaccagacattgt +tggcaccatcaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaagacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttatgggatgactatggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaagcgtg-ttccaggagagttgacttcttggtatatgcagagtcaccagagattgaaaaggtca +agagggacttccctggtcaacctgacatgtggaaagaccattttaaggcagacttttctcacatcaagctaa +ctttggccccccagggtgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggag +gtgacctccaaacatataattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggagacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattgagggatgtcaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaatg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaatgaggtacaatcagcac +ttctcaggcttaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtaaatgagtctga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgatgagtaca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcaacggaggaggacttctgtgaagaggaggaggccaaaataagacaaa +gaatcttccgcccgacaaagaagcaaaggaaggaggaaagaggtgtacttggtttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtatggtcaaggatagtcccattaggcactggttggg +gtttctgggtatcat-ccaaccttttaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggggttgaaattaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaga +agacctacaggtgagatgattcccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgtcggcggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggacctcggcaccggccct +ggtgactgcggttgcccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacttactgcggcgccccaattctgggccctggcaaggcacctaaactaagcacgaaaaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcagagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacctagggga +aaaccacctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccatggtcctactcgcaagcatgtgcctcactggacaaaaccacttccagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggaatccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgcatagctcttccatgtagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtacaggtaccactatgacgctgactat +t-ctaggtgggactcaacccagcaaaggagcattcttactgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaagaccttttggcgcctagccagcttgatgttggtgatttt +atcatctcagtccaggagggtctgccatccggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctt +agggagtacggcctggtccccacacgacctgataagactgaaggtcccctcgtcataactgaagacctcacc +ggcttgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggactagggggcctaaccatgagaacccgtacgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttcttggtgaggcttcactacatggtccccagttttacaagaaagtt +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttttgccaatgccagatataagaaatgttttctatcacta +taatcagaacaatagt---cccaaacttaggcttgtagctatgctctacacccctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacttttct +ggttccacctacagttgagtctaaaactaagaatttcaccctccccgttcttagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacaactgacggtgagctgcttggcaccaccatcttacagtctgtgtctatttgcaactt +taagg-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattacaactcaccaacttggatggttcacctatagatccaacagatgatatgcctgc +ccctcttggtacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgatt---ca---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagccccagctgtgacaccactctttcctggcg +agcagattttgttctttaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtggatagagcacttctaccaggaagcggccccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattacacaa +acaaggtttccttacaattgcagcatctggagatcaccccattgtgatgcctactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccctaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaaat---------------------------------- +-------------------------------------tactaagactttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttcttcttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacaggtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------tt-tccccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305520.1/1-7475 |Norovirus GII isolate PNV010548 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttctgataaagaagaggt------tggtgcattctccaatat +taaagttggattcaagaaaa----tgctgggtgtcgtccccaaggggacc-------------aaagcaccc +aatagtga----------------gcagcactgccccacagttaagatcgggaccagaacactagcggttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagttcgatg----------cgaagtcagaaactgtgcgtgggttaccagacctaacaacggt---gcagaa +tgaacatgaaaacacaccatacactgtccccccattgagtgaaagggaacacagaccagccactgagccgct +tcccggaacaatactagagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +cctaggggttcacaagcccccagcagcaataagcctcgcgacgatagagctcacccccatatccctctactg +gagacccgtttacaccccca---actacctggtctgcccagacacgctgaagggccttgctggtgagaagtt +cccctatacagccttcagtaacaactgttacaacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaagaagcatctccagaactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagattaaaaaggtggctaatgcaatcctctgtgctcttggatcactgttttc +aaaaccaattaaagacctgttgggcaagcttaaaccactgaacttgctgcacctgctcgcatcatgcgactg +gacgtttgcgggtatagtggagacagtcatactaatggcggagcttttc---aacgtcttttggacaccgcc +agatgtctccaacttcatagcctccctgataggtgattttgaattgcaaggtcctgaggacctggctgtaga +gcttgttcctgtggtcatgggtggcataggaatggtcctcggcttcactgccgagaagataggccgcatgct +gtcgtccgccgcatcaacactgcgggcatgcaaagacctaggaaactatgcacttgacatactcaaacttgt +tatgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgatcgaggatgccgt +cctggacatggaagccatagggaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctggacctggaagaggagaaggcgaggaaactgtccaccaaatcgtcctcgccagacatcgt +tggcactatcaatgccatactggccaggatagctgctgccagatccctcctacacaaggccaaagaagaaat +gttcagcaggatcagaccggtggttgttatgatctcaggcaggcctggcattggcaaaacccatatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagttgggctcgtcccgcgcaatggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgactatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccggtcaccctaaactgtgataggattgagaacaa +ggggaagatgttcgatagtgatgtcattataatcacgaccaatctagtcaacccggcgcccctcgattatgt +gaacttcgaggcgtg-ttccagaagggttgactttttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccccggtcaacctgatatgtggaaggaccattttaagccagacttctcccatataaagctga +ctctagccccccaaggcggatttgacaagaatggtaacaccccgcatggcaagggcaccatgagatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagtttcagctccaaggga +acgaccttcaaatatacaactttgacaccaacagagtctccgcatttaggaaactggccgcggacaacaagt +atgggatcatggaaacaatgagagtgggtgcggcactcaagaatgtcaagactttagaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgaaataatttacaagagctccaaatatcgcgtttcttccaacg +gtaaaggttctgtctctgttgataaggttgaggaccaagcatcccagactgcaaatgaggtgggttcagctc +ttcttagactcaggcaagcaagggccagatactacgtcagctgctttcaagacctcgtctacacactaatac +aggttgccggagcgtcattcgttgtta---------------acagaa------tctccaagaggttttgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgactccga-----aaagg +aagcagcccaaggta---gatgggagatcgaacccaaggacacagagccagagggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctccagcaagggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaagaaacgggaaatactccattgaggaatacctgcaagatcgggaccgctac---t +atgaggaggtggcagtcgcccgggcaacagaggaggacttctgtgaagaagaggaggccaagataaggcaga +gaatcttccgccctacaaagaaacagaggaaggaagaaaggggggtgcttggtctggtcactggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaacctgtgggcagatgacaccaggagtgtggact +ataacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccactgggcactggatggg +gcttctgggtttcat-ccaacctcttgatcacgacaacacacgtcctgcctaaagggattaaggaacttttt +ggggttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacggggctcgtgttggaggaaggtgccccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtaga +accgtcggtggccagatggggatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccctacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccacacaggggcaagatggggaggcagtccttgagggaaatgaa +aaccttggcacttactgcggtgccccaattttgggtcctggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgctcatcaccagacgctttgccgccaggtacttatgaacctgcctacctgggaggtaaggacccc +agagtagagaaagggccatccctgcagcaagtcatgagagatcaattaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacttactcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaacggagaatccttcaccggcccccttgcagatcaagcatccaaagcc +aaccttatgtatgaacaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagacgagcttgtcaag +accgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gctagggcctttggcggtctcatggatagcatgaaggcaagttgtatagccctcccatgcagggtgggaatg +aacatgaatgaggatggtcccatcatatttgacaaacactctaagtacaggtaccactatgacgcagactac +t-ccaggtgggattcaactcaacaaaggagcattctcgcagccgccatggaagtgatgg-tgcgattctctg +ccgaaccagaact-ggcacaagtggttgcagaggaccttctggctcccagtcaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcgggggtcccatgcacatcacaatggaactcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcactgatatcaatcttgaccccatgaagttaacacagaaactc +agggagtatgggctggtccccacccgacctgacaaaactgaaggtcctctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcgattgcacgagacccagctgggtggtttggaaagttggaccaagactca +atccttaggcagttatactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattct +cagcgggccacacaacttatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggtgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcagctccatcgag---tgatggcgcggccggcctcgtcccagagatcaatcatga +ggttatggcaattgagcctgtcgcaggtgcatcaatcgctgctcctgtggtgggacaacaaaatattattga +tccctggataagaaacaattttgtacaggcacctgctggagaatttactgtttcccctaggaatgccccagg +tgagtttttgcttgatttagaattaggtcctgatttgaacccctatctggcacatttggcaagaatgtacaa +cggtcatgcgggtggtatggaagtgcaaatagtactagctgggaatgcgttcacagc---tggtaaaatcct +gttcgccgtcataccgcctggatttccgtatgaaaatttgtccccagcacaactcacgatgtgcccccacgt +cgtggttgatgtaaggcagcttgagcctgtcatgctgcccatgccagacattaggaatacattctttcatta +taatcaagatggtggg---ccaaaattgaggttgattgctatgctgtacacccctctaagagctaataattc +aggtgatgatgtgttcactgtttcctgcagggttctaacaagacctgcccctgattttgaatttacattttt +agttcccccctctattgaatcaaagactaaggcattcactatcccagtgcttaaaatttctgaaatgacaaa +ttcaaga---ttccctgtaccagttgaccaaatgtacaccagcaggagtgaggggatcgtggttcaacctca +gaacggtagggccacaattgacggagagctacttggcactactctcgtctctccagtctctgtgtgtaattt +caagg-----------------------------------------gaaacttgcaaactgag--------- +----------gtcccagg------tga-ac------------------------------------------ +-----------------------------------------------gccagctt----------------- +----------taccaactgcagctgaccaacctcgatggttcacctatcgaccccactgatgacacacctgg +gccactaggttgtccagacttcaccggcctcctctacggggttgccagccagc---gtggtccaggtga--- +--------------------------cactacg--------cgg-----------gcccatgaggcacggat +tgacatcggcaatggcacttatgctcccaaaattggtcaggtcaggtt---ct---------attcaacttc +aaacaattt---tgaagtaaatcaacccacac---------------------------actttactccag- +--------tggggatctatattgagggcaatt---------cttctgatttcaatcaatggcaactccccag +gtatgggggtcat-ctagct------aacaacaaccatttggcacccgcagtttctcccctttttcctggag +agcaaattcttttctttagatctttcatcccag------gagccagtggtca------cacaa--------- +--atggagagatggattgtctcctgcctcaggagtttgtgcagcacttctaccaggaagcggcaactgcgca +gtcagaggtggccttactgaggtttgtcaaccctgacactggaagggttttgtttgagtctaaactccataa +gcaaggattcatgacaattgcaagttcaggtgatcatcccatcatcatgccaactaatggttattttagatt +tgaagcttgggttaaccaattttattctctcgcccctgtgggaactggaagtgggcgcaga---------ag +gatcc---------aataatggctggagcttttatagcaggattggctggggacgtcctgtcctctggcgtt +ggttcgctagtcaacgcggg---ttccaacgccatcaaccaaaatgttgaatataatttcaacaggcag--- +------------------------------ctccaggaagcatctttcaaacatgataaggaaatgctcaat +gcccagattgctgcgacaacgcagctgcaaaaagacataatggcaataaagcagggggttttgtccgctggc +ggcttttccccaactgatgccgcgagaggttcagttggggcccctatgaccaaaatcttagattggaatgga +tcaagatattgggctccaaattcaatgaggaccactggctactctgg-caacttcact----tcccaaggtg +tc-----------aggcaagtgtttcatcctg-ttcaaggccct---------------------------c +ccaac-----------------ccaagtactttgaag----------------------------------- +----------------------------------------------------------------------aa +tgttcccaaggctccctcttcagtg-----agttctcttagcacccaatctaccc----------------- +---------------------aatcaacaaa---attgagtggctccacag-------cagg--------aa +cc--------------------------------------tctattccctcat---------ccaga---ac +cactac-------------------act--------------ttcaagaaccagtgagtgggtgagaggaca +gaatgaaagacttagccctttcatga---gtggcgcgctacaaacaacgttcgtgacgccaccatcaagcaa +gtcttct---tctg------------------------------taggga---cagtctcgaccgtccctaa +ggaggttttgga-ctcctggacgcctgtct------------tcaacacacgcaggcagccactcttcgccc +acgttcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagaatg-------- +-------att-tgaa--------------------tttgatt------ct-ctattttg---t---tcttat +c------------tttc-----tttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305521.1/1-7520 |Norovirus GII isolate PNV008673 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaattgtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgagctttccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgtccccccactcaaccagagggaaaatagggatgctaaggagccgct +gactgggacaattttggaaatgtgggatggagagatctatcattacggtctctatgtggagcaaggtctcgt +acttggtgtgcacaaaccaccagctgccattagcctcgctaaggtcgagctatcaccactctccttgttctg +gagacctgtgtataccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgattcgtggct +gag---taggaggatgatccagagaactactggctttttcagaccctaccaagattggaataggaaacccct +ccccaccatggatgattccaagctaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcagagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttgctcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccactttaagggcttgtaaagatctcggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaccaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaattgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgttgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagctctgacttctcacacataaaactga +cattggccccacagggtggcttcgacaagaacggaaacaccccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggctacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgagagtcggaaggcagctcaaggaggttaaaaccatgccagatcttaaacagg +cactcaggaacatctcaattaagaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaatgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgccc +tacaccacctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaagccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaatccagacgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcgaggatagtcaactttggttcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgttaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgaggttcccgaaaccaatt +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacgcttgaaggtggtgac +agtaagggaacatactgtggagcaccaatcctaggcccagggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggaacagttgaaaccatttacagaacccagaggc +agaccaccaaaaccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtttacacaggtgcgctcaaggatgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatcttcgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +agaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtctcctgacatcatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaggtaattttgtacaagcccctggtggagagtttactgtgtcccctagaaatgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaacttcccaactgaaggcttgagccccagccaggtcaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cctaccattaaattgatagcaatgctgtacacaccacttagggccaataacgc +tggagatgatgtcttcacagtctcttgtcgagtgctcacgaggccatcccctgattttgacttcatatttct +ggtaccgccaacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagagattgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctattaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggctcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgaatctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggag +agcaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcattccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaagtgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgtaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaaccctaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305522.1/1-7484 |Norovirus GII isolate PNV011225 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagaactggtt-------aaagcaatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaccaatcatt +tcttacaacg----------tcaa---agagggtgtttctggtctgcctgaactctcaactgtcactcaact +ggaagagagttctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatttaccattatggcttatacgtggaacgaggattagt +actaggtgtacacaaaccaccagcagccatcagccttgccaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggactacaggttttttccgaccctatcaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggttcttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcacttacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +tgacgccctcagactccaggagcttgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggcaaagtctttgatagtgacgccataataataaccaccaacctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttcacacacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaaaaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcaacttgccgctgaaaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaaaaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gtaaaggtaatgtgcgtgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtattatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgtcatctcctctgatgacatcaaaaccgagggcaaaaaaggaaagaaca +aaactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +aaagaatcagggaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagagcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaaacccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaactcagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagctcttt +ggagtgcccatcaaacaaatacaagttcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagacgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggagctcatgcccttggcagccagaatgggcacccacgcaaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggttattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtgtacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaataccattatgatgcagattat +t-cccgctgggactcaacacaacaaagagcagtgctagctacagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaattaacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaggatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaatattgttgtccagtgtca +gaatgggcgcgtcactcttgatggtgagttgatgggcactacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gctagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatactacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcattagagatttct------------actgaatc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatggactctccccga +ctatgctggccag-ttcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcaactccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatatcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcataactatagccaagaatggtgactctccaataaccgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +aattc---------aataatggctggagcttttatagcaggattggctggtgacatgttcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgtgcacagatctacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtggatcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgttcgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgtctaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------atttga--------t----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305523.1/1-7528 |Norovirus GII isolate PNV002309 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aattctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgcccaacagttaagatcgggcctaaaatactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtgattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgagttctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaagcccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttattacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgtgcgtgtaaagacttagggaactatgctcttgacatacttaaattggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagacatggaggccataggtaacaaccatctcacgaccctcctcaaggacaaagacagtctcacggcttt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatccctcctacacaaagctaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagggtcgggctcgttccgcgcaacggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgattatggaatgggaaaccctgtcaa +agatgccttaacactacaagaattagctgacacatgcccagttactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ttctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggactatttcaaacaagacttttcccatataaagctga +ccttagccccccaaggcggatttgacaagaacggtaacaccccgcatggtaagggcaccatgcgatctctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggacgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaagaccg +ccttaagagatgtgaggttcaatgagtgtgaaataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtcccagactgcaaatgaagtgggctcagcac +tcctcagactcagacaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcagatgacactaggagtgtggact +acaatgagaggcttgacttcgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctccagaaggtactgtctgttctattctcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtaggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggctgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggggaggcagtccttgagggaaatgaa +aaccttggcacttactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttctggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagggaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgat +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccacac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcagaccttggtacgatgatcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatagccctcccatgcagagtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggacctcttggcgcccagccagctagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggcctttcaccagacgttgtccaagcccattcctgtttt +tcattctatggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagagggcccaatcatgaaaacccatacgagagcatggttccccattcc +cagcgagccacccagctcatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaatcttgaattgggcccagaactaaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacatttccccgtggacaatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattttt +agtcccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---ttcccggctgctatagacatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------ggaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------accacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggcacagtgttcggagtggctagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaattgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tactgattt---taatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggagaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ctaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacggatccttttcttcaggtctgtagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaagttgagtatgattttaacaagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaatataaagcaggggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcacactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtatagctccccttcctctgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtt----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------ct-cttcctct---t-cc-ccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305524.1/1-7520 |Norovirus GII isolate PNV004328 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgagctttccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgttcccccactcaaccagagggaaaatagggatgctaaggagccact +gactgggacaattttggaaatgtgggatggagagatctaccattacggtctctatgtggagcaaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctatcaccactctccttgttctg +gagacctgtgtataccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggaggatgatccagagaactactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcagagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttactcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttaagggcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaccaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaatcgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctaactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgttgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagttctgacttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacggaaacaccccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggctacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcagcaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgagagtcggaaggcagctcaaggaggttaaaaccatgccagatcttaaacagg +cactcagtaacatctcaattaagaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaacgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgcct +tacaccatctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcgaggatagtcaactttggttcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgctaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacacttgaaggtagtgac +agtaagggaacatactgtggagcaccaatcctaggcccagggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggatcagttgaaaccatttacagaacccagaggc +agaccaccaaagccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcattcgcgcaagcttgtgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacattatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatacgggttgaaaccaacccgccctgacaagactgaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggaggactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +gatagtggatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaataatttctatcacta +taatcaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggccaataatgc +tggagatgatgtcttcacggtctcttgtcgagtgctcacgaggccatcccctgattttgatttcatatttct +ggtaccgccaacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagaggttgtacacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggagcaactatgacccaacggaagaaatcccagc +ccccctgggaaccccagattttgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggttcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgaatctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggtg +agcaactccttttcttcagatccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +gggttctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaaccctaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305525.1/1-7520 |Norovirus GII isolate PNV005999-c1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgagctctccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgttcccccactcaaccagagggaaaatagggatgctaaggagccact +gactgggacaattctggaaatgtgggatggagagatctatcattacggtctctatgtggagcaaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctatcaccactctccttgttctg +gagacctgtgtataccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggaggatgatccagagaactactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcagagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttactcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttaagggcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaacaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaatcgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggatgactatgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgtcgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagttctgacttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacggaaacactccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggttacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgagagtcggaaggcagctcaaggaggtcaaaaccatgccagatcttaaacagg +cactcaggaacatctcaattaaaaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaacgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgccc +tacaccatctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcgtctggtcgaggatagtcaactttggttcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgctaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacacttgaaggtagtgac +agtaagggaacatactgtggagcaccaatcctaggcccagggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggatcagttgaaaccatttacagaacccagaggc +agaccaccaaagccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacagacaattgac +ccacctgagaaatggtcattcgcgcaagcttgtgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcgctcaaggatgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atacttagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttggttatcgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccaactga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttaattcccctacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggccaataatgc +tggagatgatgtcttcacggtctcttgtcgagtgctcacgaggccatcccctgattttgatttcatatttct +ggtaccgccaacagttgaatcaagaactaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagaggttgtacacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggctcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgaatctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaaccctaggactcc------------------------------ +------------------------------tacccccgctcggagctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgac-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305526.1/1-7459 |Norovirus GII isolate PNV005999-c2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------------------gcacaaccagctcaaacagt +gaaattcac----aacaaagatgttagtaacacacaaaac------------------atctttgccaacat +gactgttggcataaagaggg----ctctgggggcgaggccaaaacaacctccccccaagcccccttccacaa +agaaggaggacaaa-----------------------------------------------accacccttcc +tccaatacccc--------------------ccccaccccccaatgg------tgaggacattgtcatcacg +tataacaagc----------aaga---tgacaaggtcagtggagttcccatcgtttccactgttgagacatc +ccctctgcatgacaccgcatacagtgtccctcccctggatcaaagggaaaaggttgatgcaaaggagcccct +aacaggttcaatactcgagatgtgggatggtgagatctaccactacggcctctatgtggagaagggtttggt +cctcggcgtgcacaagccaccatccgccttgagcctggcacgcatagagttaacccccctctctctctactg +gaggacagtctatacaccac---cctacctagtggctccagacaccctcaagaaactccacggggaatcatt +cccctacacggcttttgacaacaactgctacaccttttgctgttgggtcttagacctaaacgactcatggct +taa---taggaaatgtgtatcaaggactactggcttctacagaccctaccaggattggaatagaaaacccct +accaaccatggatgagagtaaactcaaaaaggtggccaatgtgtttctgtgtggtctatccagcttattcac +caggcctattaaggacctcgtaggtagactcaaaccattgaacatcctcaacattgtcaccaactgtgattg +gactttccccggtgttgtagaagctctcatcctactggcagaactcttt---ggcattttctggaccccacc +ggacatatccgctttcgtagcctccctgttgggcgactacgagatgcaagggcctgaggacattgcaaccga +gatcgtgccagttgttctcggtggtattggcatggtccttggtttcaccaaagagaggattggccgactact +gagttcagctgcatcatcactcagggcatgcaaggagattggcaactacgggatagaggtggtcaaattggt +gatgaaatggttctttcccaccaaaaatgaagtgaatgaaatggagatggttagggcgatagaagatgcggt +acttgacttcgaggcaatagaaaacaaccatatgacagccctgctcaaagacaagaacagcctagccacttt +cctcagagcactagacatggaggaggagaaagcgcggaaattgtcaaccaaatccgcgtcaccagacataat +cggtaccataaacgcccttctagccaggctcgccgccgctagatccctagtccacagggccaaggaagagat +gtcatccaggatgcgtcctgttgtcattatgatttctggccgacccggaatagggaagacacaccttgcacg +cgacctggctaagaagatggcagcaaccctctcaggtgaccagagagtgggccttgtaccaagaaacggtgt +cgatcactgggatgcatacaaaggagagagaatcgtgctctgggatgattatggcatgagcaaccccgtgtc +tgatgccctacggctccaagaacttgccgacacatgccccctaacacttaattgtgacaggatagagaacaa +agggaaagtctttgatagtgataccataatcataacaaccaatctgtcaaacccagctccacttgattatgt +aaactttgaagcttg-ctcccgccgcattgacttcctcgtctatgcggattcccctgcagttgacaaagcaa +agagggatttccctggtcaaccagacatgtggaaggatgcattcaaatcagacttctcccacataaaattac +aattggcaccacaaggaggtttcgacaaaaatggcaacaccccacatggtaaaggagtcatgaagaccctaa +ccacacactctctcatagccagggctactggtttgttgcatgagagactggatgaatttgatctacaaggtc +cagaattgcccatatacaattttgaccagaacaaggtggcttcctttaggaagctggctgcagacaacaagt +atggtctcatggaaaccataaaagcaggtaacaagttgaaggaagtcaagacactggatcaattcaaagagg +ccgtgagggacatacgcataaagccttgcagaataatctacaattccacagcttatgacctggagtctaacg +gctcagggaaggtcactgtcaagaaagtaggagaccaaaaagtccaagccaacaatgagctctactctgccc +tcaacaacctgcgtagagccaggattagatactatgtcaagtgtttccaagaaatgatctactcactcctcc +aaattgccggtgcggcttttgtcacatcgagaatgacacaaaggatga------atgttggcaagctgtgga +ccaagccgga------------gagaac--------tatgaaggcccccacggagccccctgctcctcca-- +--------attgatg---attggaccataaacccagttgacacaattccggaaggtaagaaaggcaagaaca +aaagtggtagagggaagaaacacactgccttctccagcaaaggtctcagtgatgaggagtacgatgaataca +agaggatcagagaggaacgtcaaggaaggtactccatagaagaatacttgcaggacagagaccgctat---t +atgaagaattggctatagccaaagcaacagaggaaaatttctgtgaagaggaagaagtcaaaataaggcaaa +ggatcttcaggccaaccaagaaacaacgcagggaagaaagagccaccctgggactggtcacaggcagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaagggaaagctgtgggctgatgatgaccgtagcgttaact +acaatgaaaggatagattttgaagccccccctagtctatggtctagaatagttaattttggttcaggttggg +gtttctgggtctctt-ccaacctcttcatcacctccacacatgttgttccaccaggcatgacggaggctttt +ggagtcccaacaagccaaatccaaattcacaggagtggggaattttgcaagatgagattccccaaagccatc +agacctgatgtctctggaatgattcttgaggaaggcgcacccgaagggacggtggtgaccatactgatcaag +agaaccactggagagctcatgccactggcagcccgtatgggcacccatgccaccatgaagatacaggggagg +atgattgggggccaaatggggatgcttctcacagggtccaatgccaaaaatatggaccttggtaccgtcccc +ggagattgtggctgtccttatgtctacaaaaggggtaatgattgggttgtcattggggtgcacaccgccgct +gcaaggggtggcaacacggtgatatgtgcaactcagggaccagatggagaagccacacttgagggaggagac +aatcacggtacttactgtggcgcaccaatcatgggaccaggaaatgccccaaaactcagcaccaaaaccaaa +ttctggagatcttccaatgccccacttccccctggcacatatgaacctgcctatcttggtggtagagacccc +agggttaaaggtggcccatcactacaacaagtcatgagagaccaactcaaacccttcaccgctccccgtggg +aagccgccaaggccggcagttctagaggccgctaaggagaccatctgtagcgtacttgagcaaaccatagaa +ccaccccaaaagtggtcctatgcgcaagcctgtgcttccctggacaagacaacatcaagtggctacccccac +cacaagaagaagaatgataactggaatggagagtctttcactggcgtcctggctgaccaggcatcaaaagca +aatctcatgtttgagcaagggaaacacatgcagcctgtgtatacagctgcacttaaggatgaacttgtcaag +accagtaagatctatgaaaccatcaagaaaaggctcttgtggggttctgacctgggcacgatgattcgttgt +gcaagatcatttgggggtctcatggatgagatgaaggctaactgtgtgagattgcccatcagggtcgggatg +aacatgaatgaagatggacctataatctttgagaaacatgcaaaatatagatatcattatgatgctgattat +t-ccaggtgggactcaacccaacagagacacatactgggtgttgcacttgacatcatgg-ttaaattctcag +ctgaaccagaact-atcacaagtggtgtctgaggatcttctgtcacccagtgtcgtggatgttggtgacttt +aagatcacaataaacgagggccttccctcaggtgtcccatgcacatctcaatggaactcaattgctcattgg +cttctaacactgtgtgccatgtcggaagtctctggactctcccccgacgtggtacaatcaaattcatgtttc +tccttctatggggatgatgagatagtcagcacagacataaagttggacccacaaaaactgacagacaaactg +agagagtatgggctcattccaacccgacctgataaaacagaggggccactcataattagagagagcttagag +ggtctgacgttcctcaggagagatatatgtagggacccagtcggctggtatggtaagcttgaccagtcctca +atcatgagacaactgtattggaccaaaggacccaaccatgaggatcccaatgaaacaatgattccacattct +caaagaccaatacaattaatgtcccttctcggtgaggctgccctgcatggaccaacattttacaagaaagtt +agcaaattggtaatcactgaactcaaagaaggtggaatggatttttacgtgcccagacaagaaccaatgtac +aggtggatgagattctccgacttgagcacgtgggagggtgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgccaacctcgttccagaggccaactcaga +ggtattggcattggaaccggtggcaggtggggctattgccgcacctctcactggtcaaacaaatataattga +cccctggattatgaaaaactttgtgcaggcacctaatggtgaattcacaatatccccaagaaattcccctgg +agaaattttgttaaaccttgagttaggaccagaaattaatccttttcttgcccacttatctaggatgtataa +tgggtttgctgggggagtggaggtacaggtgctcatggctggcaatgcattcactgc---aggaaaggtcat +atttgcggctgtgccgcctcatttcccagtagaaaacattagtcccccacagataactatgttcccccacat +aatagttgatgttaggactcttgaaccaattcttatccctgtcccagatgtgagaaataatttctttcatta +caatcaaatgaatgat---ccaaagatgaggttaattgctatgctgtacacccccttaagatcaaatggttc +ttctgatgatgttttcactgtgtcttgtagagttctcaccagacccacccctgattttgagttcaattattt +ggtaccacccactgtcgagtcaaggacaaaacccttcagtgtgcccatcctaacaattggagagatgacaaa +ttctagg---ttcccattacctattgacatgctgtacaccagcccgactgacagtttggtcgtccaacctca +aaatggcaggtgcacaattgaaggtgaattgcaaggtacaactcaattggtgactccaaacatttgttccct +tcgag-----------------------------------------gcgcaatcaccg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgaca----------------------------------accacaaa----------------- +----------tggcacatgacagtcacgagccctaatggtgccgcctttgacccaacagaggatgtgcctgc +ccccctgggcactccagatttcatagctgacatatatggggttctctcccaga---gaaatagatc---cat +cgaatct-----ggccagagtggtcctgcaaat--------aga-----------tctcatgaggctgttgt +ctccacacggagtcctaaatttacccctaaattaggttcagtaatgattgcca---------cttggaacac +caatgatat---tga---acttcagcccacca---------------------------aattcacaccta- +--------taggt------cttgagaatcccg------------gcccctttcaacaatggcggctaccaaa +ttactcaggagcc-ctaaca------ctcaacatgggacttgcatcatctgtattcccaacataccctggtg +aacaaattcttttcttccgttcatacattcccc------tcaaaggtggctt------tggaa--------- +--acacagccatagattgccttgtaccacaggaatgggtccagcacttctatcaggaatcagcccctgcaca +atcagatgtggcactacttaggtatgtgaaccctgagacaggacgtgtcctgtttgaggccaaactgcacag +acaaggtttccttacagttgctagatcaggtgaaagtcccatcaatgttcctgccaacggttatttcagatt +tgactcttgggttaaccaattctactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcttagcaggattggctggtgacatagtcacaaatagtgta +ggttctttagttaatgcagg---agctagtgcaatcaaccagaaaattgattttgaaaataataaatac--- +------------------------------cttcaaggagaatcttttaaacatgataaagaaatgctgaat +gcacaaattgaggctacaaagaaattgcagatggatatgataaacatcaaacaaggagttctttcagctggg +gggttctcacccactgatgcggctcgtggagccatcaacgctcctatgacaaaggttctggattggaatggg +actagatactgggcacccaatgctcctgtaacaacatcactgtctggtggcttcactggg------------ +ca-----------ggccgtacacaggcccacaccaaat---------------------------------t +ttggcag----------------caatcaaatcccaaagacaatg--------------------------- +-------------------------------------------------tcc---------------agtag +gggaacat-----------ctgtg------------agatcaaattcaactcaattgaccagt--------- +----------ctgggt-------tcccaatc------ttctggttcctcccgaagcagtgtgactaccgtga +gtagctcat------tgc--------------------------------ctt------------------c +aaccaa---------------------------------------caggactagagagtgggtgaaccaaca +aaatctcaatttggaacctcacctac---ctggatcactgaggacagcctttgtcactccaccatcgagcac +cgcttcc---agct------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattattta---- +atta-g-aac-taat------------------------------------ttcaatt------t------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305527.1/1-7525 |Norovirus GII isolate ONVHH2290 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcatttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcacttttcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccctgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaatcgaaaacaaccatatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgacattgt +gggcacaatcaactctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaatcgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctaggatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatttttagaccaacaaggaaacaacgcaaagaagagagggcctctcttggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +ataacgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacataaatcaggtgagttctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggtacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtagtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgctccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaggcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgtcaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcctagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtactcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacagcaggcttccttccaacatgacaaagagatgctccaa +tcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgcttctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggaagc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tg-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305528.1/1-7525 |Norovirus GII isolate ONVHH2342 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcatttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcacttttcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccctgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaatcgaaaacaaccatatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgacattgt +gggcacaatcaactctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaatcgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctaggatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggatttttagaccaacaaggaaacaacgcaaagaagagagggcctctcttggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +ataacgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacataaatcaggtgagttctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggtacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtagtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgctccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaggcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgtcaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcctagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtactcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacagcaggcttccttccaacatgacaaagagatgctccaa +tcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgcttctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggaagc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tg-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305529.1/1-7528 |Norovirus GII isolate ONVHH0788 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaatat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagttcc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actata +cagtttgatg----------caaaatcggaaacagtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccttacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgatacgtggtt +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggatctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcattttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctccaattttatagcctccctcataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggtttcacagctgagaagataggtcgcatgct +gtcatccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacaaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatttggaagaagagaaagcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatcccttctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattacggaatggggaaccctgtcaa +agatgctctaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggattgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggtagcaggacttgtccatgagaggaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaattatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtgaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttctaacg +gcaagggctctgtttctgttgataaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgtttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaactgaaac-------------ccaagaagcgagtgaacccga-----aaagg +aagtagctcaaggtg---gatgggagatagaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacaccgccttctctagcaaaggcttaagtgatgaagagtatgatgagttca +agagaatcagggaagagaggaatggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcggtcgcccgagcaacagaagaggacttttgtgaagaagaggaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcagaaagaggaaaccagacgattttcagccaaaaggcaatctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagttccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggatcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggttcaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggcgctcctgagggcactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgcttcttacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctggggggtaaggatccc +agggtggaaaaggggccctccctgcagcaagttatgagagaccagctaaaaccattcacagagcccaggggc +aaaccgcctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggaacattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccttcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaagctc +agagagtatggtctggtccctacccggcctgataagactgaaggtcccctcgttataactgaagacctaacc +ggcctgacattcctgcgtagatcaattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgccccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttttaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggacgtgttcactgtgtcctgtagagttctgactcgtcccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattttaacccttggtgagttgtccaa +ttcccgc---ttccctgctgccatagatatgctttatactgatcccaacgaatcaatagttgttcagcccca +aaatggtagatgcacccttgacggtacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagtcag--------- +----------actgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggtacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggtacagtgttcggagtggcgagccaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggtacaattctcat---ta---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgaca---------------------ataattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ttaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtgccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtcttataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agagggattcctcaccgtggctaatcctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgactgctggc +ggcttctcccctgctgacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-acaattctctagcagccccgtcca +ta-----------ggtctcctgctcccctccagcacaccgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctctccttccactgtttcttcac----------------- +---------------------aatcaactca---ctcaacagtgttgtctg-------tagg--------ag +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ccccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-cttcttcc---t--ccccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305530.1/1-7525 |Norovirus GII isolate ONVHH1493 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaactaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgccaaggtcgagctaacgccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaaccccttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctcctcaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgagacgtattgacttcctcgtgtacgcagaagcccctgatgtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggct +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggcagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctcaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgttaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctcac-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtagtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaggctcagtaccaagactaag +ttttggagatcatccacaacacctctcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaaaaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattacgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaaaccaactcgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactttggagcgcgcccttgggccctgatctaaatccttacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcactacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaaattacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305531.1/1-7528 |Norovirus GII isolate ONVHH0814 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaatat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagttcc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actata +cagtttgatg----------caaaatcggaaacagtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccttacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgatacgtggtt +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggatctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcattttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctccaattttatagcctccctcataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggtttcacagctgagaagataggtcgcatgct +gtcatccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacaaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatttggaagaagagaaagcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatcccttctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattacggaatggggaaccctgtcaa +agatgctctaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggattgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggtagcaggacttgtccatgagaggaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaattatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtgaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttctaacg +gcaagggctctgtttctgttgataaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgtttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaactgaaac-------------ccaagaagcgagtgaacccga-----aaagg +aagtagctcaaggtg---gatgggagatagaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacaccgccttctctagcaaaggcttaagtgatgaagagtatgatgagttca +agagaatcagggaagagaggaatggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcggtcgcccgagcaacagaagaggacttttgtgaagaagaggaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcagaaagaggaaaccagacgattttcagccaaaaggcaatctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagttccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggatcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggttcaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggagggcgctcctgagggcactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgcttcttacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctggggggtaaggatccc +agggtggaaaaggggccctccctgcagcaagttatgagagaccagctaaaaccattcacagagcccaggggc +aaaccgcctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggaacattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccttcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaagctc +agagagtatggtctggtccctacccggcctgataagactgaaggtcccctcgttataactgaagacctaacc +ggcctgacattcctgcgtagatcaattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgccccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttttaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggacgtgttcactgtgtcctgtagagttctgactcgtcccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattttaacccttggtgagttgtccaa +ttcccgc---ttccctgctgccatagatatgctttatactgatcccaacgaatcaatagttgttcagcccca +aaatggtagatgcacccttgacggtacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagtcag--------- +----------actgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggtacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggtacagtgttcggagtggcgagccaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggtacaattctcat---ta---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgaca---------------------ataattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ttaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtgccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtcttataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agagggattcctcaccgtggctaatcctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgactgctggc +ggcttctcccctgctgacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-acaattctctagcagccccgtcca +ta-----------ggtctcctgctcccctccagcacaccgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctctccttccactgtttcttcac----------------- +---------------------aatcaactca---ctcaacagtgttgtctg-------tagg--------ag +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ccccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-cttcttcc---t--ccccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305532.1/1-7528 |Norovirus GII isolate ONVHH0813 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaatat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagttcc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actata +cagtttgatg----------caaaatcggaaacagtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccttacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgatacgtggtt +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggatctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcattttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctccaattttatagcctccctcataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggtttcacagctgagaagataggtcgcatgct +gtcatccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacaaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatttggaagaagagaaagcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatcccttctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgtcccgcgcaacggggt +cgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattacggaatggggaaccctgtcaa +agatgctctaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggattgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctca +cccaggggtccctgaccgcaagggtagcaggacttgtccatgagaggaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaattatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtgaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttctaacg +gcaagggctctgtttctgttgataaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgtttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaactgaaac-------------ccaagaagcgagtgaacccga-----aaagg +aagtagctcaaggtg---gatgggagatagaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacaccgccttctctagcaaaggcttaagtgatgaagagtatgatgagttca +agagaatcagggaagagaggaatggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcggtcgcccgagcaacagaagaggacttttgtgaagaagaggaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcagaaagaggaaaccagacgattttcagccaaaaggcaatctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagttccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggatcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggttcaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggcgctcctgagggcactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgcttcttacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctggggggtaaggatccc +agggtggaaaaggggccctccctgcagcaagttatgagagaccagctaaaaccattcacagagcccaggggc +aaaccgcctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggaacattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccttcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaagctc +agagagtatggtctggtccctacccggcctgataagactgaaggtcccctcgttataactgaagacctaacc +ggcctgacattcctgcgtagatcaattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcagttatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgccccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttttaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggacgtgttcactgtgtcctgtagagttctgactcgtcccgctccagattttgaattcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattttaacccttggtgagttgtccaa +ttcccgc---ttccctgctgccatagatatgctttatactgatcccaacgaatcaatagttgttcagcccca +aaatggtagatgcacccttgacggtacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagtcag--------- +----------actgcgagagcg------gc----------------------------tgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggtacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggtacagtgttcggagtggcgagccaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggtacaattctcat---ta---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgaca---------------------ataattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ttaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtgccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtcttataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agagggattcctcaccgtggctaatcctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgactgctggc +ggcttctcccctgctgacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-acaattctctagcagccccgtcca +ta-----------ggtctcctgctcccctccagcacaccgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctctccttccactgtttcttcac----------------- +---------------------aatcaactca---ctcaacagtgttgtctg-------tagg--------ag +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ccccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaaccacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-cttcttcc---t--ccccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305533.1/1-7519 |Norovirus GII isolate ONVHH0987 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaataccagcacaaacagt +gtaattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgctcccagggttccttccccca +acagggagggaagacatgaaaccactcctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggagaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctattccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtatcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gactttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgtt +gagctctgccgcttcctcacttagagcgtgcagggagatcggcaactatgggatagaagtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctggatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatttggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatgggatgagcaaccctgtgac +tgatgcactgcggcttcaggagcttgccgacacatgccccctaacgcttaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatggaaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaggt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacctcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaggaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaggcgcctcccagcctttggtctcgaatagtcaacttcgggtcaggttggg +gtttttgggtctctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtctacaagagaggtaatgactgggtggctataggggtgcacaccgcagcc +gccagaggtggcaacaccgtgatttgtgccacccagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtccttcaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacaccgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactat +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttgccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttggatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttaacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggcgctgccggcctcgtgccagaaagtaacagtga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggatcagaactaattttgtccaagcccctaatggtgaattcacagtttctcctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgatgatgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtagagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttaggcacaacccaactacaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctcttccctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctaccaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggtcaatcaattttactctcttgcccccatgggaactgggaatgggcgtaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaagt +gcccaaattcaagcaacaaaacagttgcaggctgacatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaacc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaatct------cacaaattctactcaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctagaggttcttctgctccttctactctatcaaggactacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------gcggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattag---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305534.1/1-7525 |Norovirus GII isolate ONVHH0711 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaactaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgccaaggtcgagctaacgccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaaccccttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctcctcaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaactgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggct +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggcagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctcaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgttaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctcac-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtagtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacacctctcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaaaaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattacgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaaaccaactcgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccttacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcactacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcttacactggccaacatgatttggttattccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305535.1/1-7525 |Norovirus GII isolate ONVHH0051 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccaccatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtaagatccatcgaggatgcggt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tacaccacctaaggtgcgctagaatcagatattatgttaaatgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggattggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtagtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaaggaacatactgtggcgctccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaatctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcattcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaaaaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgaactcaaggcgcactgtgtcacactacctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagagccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcacactttgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacagttgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agtaaattagtcattgcagagttgaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgattgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccacg----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggttttggactgtctgctcccccaggaatgggtgcagttcttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcaca---------------------------------g +ccaggaa----------------gagctaatcttagggaagc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-taat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305536.1/1-7511 |Norovirus GII isolate ONVHH0778 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaagtcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctcggcctaaacagccc-gccccgagggacaacccacaa +aag---------------------cctccaagaccaccaactcccgagttggtc-------aaggggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagaaatataccactatggcttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaaggacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaatatatttctgtgttcattgtccacgctgttcac +cagacctataaaagatctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcgatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaagccagggataggcaagactcatttggccag +ggaggtggcgagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +agcgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccactggttcccttattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttagtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgccgaatcatctacggtggctcaacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtaaagaatacctctgtgcagaccaacaacgagttggccggagccc +tgcaccacctcaaacatgcccgaatcaggtactatgtcagatgcgtgcaagaagcagtctactctatcatac +aaatcgctggcgctgcgtttgtaaccacacgcattgcacgccgcatga------acatacaagaactttggt +cgaagccaccatt---agaccaaaatga--------gtcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------ggcg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacacagcattctctagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtaccttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagatttctgtgaggaggaggagatcaagatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgataacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttttgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaagcaaatccaggtccacaaatcaggtgaattttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcactgtggcaaccgtgctcatcaaa +cgccctaccggagaactcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgtccctacatctacaagaggggcaatgactatatagtcattggggtgcatacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatattgtggggcacccattctaggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgtcaagggtggaccctccctacagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cccccacaaaaatggacttacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgtccggaagaatgaatgctggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtcaag +actgacaaagtctatggaaagatcaaaaagagactgctctggggctctgacttatccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtaggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-cccgctgggattcaacacaacagagagcagtattagcatcagccttggaaatcatgg-tcaggttctctg +cagagccacaact-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctactaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaagagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagatcccagtgagacaatgataccccactct +caaagacccatacagctcatggcattgcttggtgaggcctcccttcacggaccctctttctatagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaacgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaattttccaactgacaatttgagtgcagcacagatcacaatgtgtcctcatgt +aattgtggatgtcagacagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagtcctgatttttcatttaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttttccctccctattttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgattctctgcacaccagtccaactgataacattgttgttcagtgcca +aaatgggcgcgtcacccttgacggtgagctaatgggcaccactcaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggtcagtgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacaactagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +ccctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaacg--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaacgaggcagac---------tttcaacaatggaccttacccga +ctattctggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacagctgcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcttggtcccccaggaatgggtcgaacatttctaccaggagtccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacattagcccccatgggaactgggaatgggcgcaga---------ag +gatcc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaggttgattttgaaaataataaatattta +caaaatg---------------------------------catctttcaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggttgcaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttttcccccactgatgcagcccgtggggctattaatgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccactacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttacaaccaatcaa--- +gccccaa----------------aacccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaaactca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------tagaactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-gtt-ttta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305537.1/1-7519 |Norovirus GII isolate ONVHH1420 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaacaccagcacaaacagt +gtaattcac----aaccaagatgtaaattccacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaactcgctcccagggttccttccccca +acagagagggaagacatgaaaccactcctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tacaccaagc----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggagaagattgaagcgaaggagcccct +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttagt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gactttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtactcggattcaccaaagaaagaattggccggttgtt +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtggtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctggatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatttggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatgggatgagcaaccctgtgac +tgatgcactgcggcttcaggagcttgccgacacatgccccctaacgcttaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatggaaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaataaattgaaaagcgtcaagactctagaacaactcaaggacg +ccctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccaggccaga------------aaaaca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccaacaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagggaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaggcgcctcccagcctttggtctcgaatagtcaacttcgggtcaggttggg +gtttttgggtctctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgattaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtctacaagagaggtaatgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatatgtgccacccagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccgccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtccttcactggtgtgttggctgaccaagcctccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatgggcccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttggatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttaacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggcgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggatcagaactaattttgtccaagcccctaatggtgaattcacagtttctcctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgtcagaaccttagaacctgtactgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgatgatgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtagagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttaggcacaacccaactacaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------tctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaactgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgagatcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctaccaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggtcaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaacc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------gcggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattag---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305538.1/1-7520 |Norovirus GII isolate PNV004379 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------gggggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgagctttccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgttcccccactcaaccagagggaaaatagggatgctaaggagccact +gactgggacaattttggaaatgtgggatggagagatctatcattacggtctctatgtggagcaaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctatcaccactctccttgttctg +gagacctgtgtacaccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggaggatgatccagagaactactggttttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcagagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttactcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttaagggcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaccaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaatcgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccaccaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgttgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagttctgacttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacggaaacaccccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggctacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgagagtcggaaggcagctcaaggaggttaaaaccatgccagatcttaaacagg +cactcaggaacatctcaattaagaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaacgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgccc +tacaccatctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcgaggatagtcaactttggttcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgctaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacacttgaaggtagtgac +agtaagggaacatactgtggagcaccaatcctaggcccggggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggatcagttgaaaccatttacagaacccagaggc +agaccaccaaagccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcattcgcgcaagcttgtgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatcattcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcgctcaaggatgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccactattaaattgatagcaatgctgtacacaccacttagggccaataatgc +tggagatgatgtcttcacggtctcttgtcgagtgctcacgaggccatcccctgattttgatttcatatttct +ggtgccgccaacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagaggttgtacacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggctcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgaatctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaaccctaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgccactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305539.1/1-7520 |Norovirus GII isolate PNV007073 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccaccccccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgaactttccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgttcccccactcaaccagagggaaaatagggatgctaaggagccact +gactgggacaattttggaaatgtgggatggagagatctatcattacggtctctatgtggagcaaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctatcaccactctccttgttctg +gagacctgtgtataccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggaggatgatccagagaactactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcggagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttactcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttaagggcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccacattgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaccaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaatcgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggaaagggtcgtcctatgggacgactacgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgttgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagttctgacttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacggaaacaccccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggctacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgagagtcggaaggcagctcaaggaggttaaaaccatgccagatcttaaacagg +cactcaggaacatctcaattaagaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaacgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgccc +tacaccatctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtcttagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcaactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcgaggatagtcaactttggctcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccacgtcataccccagggtgctaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacacttgaaggtagtgac +agtaagggaacatactgtggagcaccaatcctaggcccagggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggatcagttgaaaccatttacagaacccagaggc +agaccaccaaagccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcattcgcgcaagcttgtgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcgctcaaggacgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatatgggttgaaaccaacccgccctgacaagactgaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggagatgatgtcttcacggtctcttgtcgagtgctcacgaggccatcccctgattttgatttcatatttct +ggtaccgccaacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagaggttgtacacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attatgca----------------- +----------------atgaatttggcctctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggctcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgagtctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggag +agcaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagccccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaactctaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305540.1/1-7527 |Norovirus GII isolate PNV010945 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aattctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcctaaaatactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------gctgta +cagtttgatg----------caaaatcggaaactgtgattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgagttctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaagcccccggcagctataagcttcgcgacgatagagctcacccccatatctctatactg +gaggcctgtctacaccccca---gctacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +cag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttattacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgctcttgacatacttaaattggt +catgaagtggtttttcccaaagaaagaggagaaagccgagatggagaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccatctcacgaccctcctcaaggacaaagacagtctcacggcttt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaaatcgtcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatccctcctacataaggctaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgttaa +agatgccttaacactacaagaattagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggactatttcaaacaagacttttcccatataaagctga +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatctctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggacgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagtgctcaaaaatgtcaaaactttggaagatctgaagaccg +ccttaagagatgtgaggttcaatgagtgtgaaataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtcccagactgcaaatgaagtgggctcagcac +tccttagacttagacaagcaagggctagatattatgtcagctgtttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcctga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcagatgacactaggagtgtggact +acaatgagaggcttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctccagaaggtactgtctgttctattctcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggggaggcagtccttgagggaaatgaa +aaccttggcacttactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaag +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagggaccagctgaagccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgccaaaccatggacctactcacaagcatgtgcctcactggacaagaccacttctagtggaagcccacac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcagaccttggtacgatgatcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatagccctcccatgcagagtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtaccattatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggacctcttggcgcccagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggcctttcaccagacgttatccaagcccattcctgcttt +tcattctatggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccattcc +cagcgagccacccagctcatggcccttcttggtgaggcttcactgcatggtccccagttctacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggcgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgctcctaaatcttgaattgggcccagaactaaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacatttccccgtggacaatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattttt +agtcccaccaactgttgaatcaaaaacaaaaccctttactttacctattctaacccttggtgagttgtctaa +ttcccgt---ttcccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------ggaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggcacagtgttcggagtggctagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcgcccaaattaggcacaattcttat---ca---------aatctgaatc +tactgattt---taatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgacc------ctaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacggatccttttctttaggtctgtagtaccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaatataaaacaggggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcacactgctcc---------------------------a +ccaa-------------------aaggtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtatagctccccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-cttcctct---t-cc-ccttt +t------------ctct-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305541.1/1-7479 |Norovirus GII isolate PNV016867 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagaactggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaccaatcatt +tcttacaacg----------tcaa---agagggtgtttctggtctgcctgaactctcaactgtcactcaact +ggaagagagttctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatttaccattatggcttatacgtggaacgaggattagt +actaggtgtacacaaaccaccagcagccatcagccttgccaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaggaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggactacaggctttttccgaccctatcaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggttcttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcacttacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +tgacgccctcagactccaggagcttgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggcaaagtctttgatagtgatgccataataataaccaccaacctggccaacccagcgccactggattacgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgatttcacacacataaaactga +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaaaaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaactttgaccgcaacaaggtgcttgcttttaggcaacttgccgctgaaaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaaaaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaatatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gtaaaggtaatgtgcgtgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtattatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcatttattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgtcatctcctctgatgacatcaaaaccgagggcaaaaaaggaaagaaca +aaactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +aaagaatcagggaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagagtctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaaacccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaactcagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagctcttt +ggagtgcccatcaaacaaatacaagttcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagacgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggagctcatgcccttggcagccagaatgggcacccacgcaaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggttattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtgtacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagttagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattat +t-cccgctgggactcaacacaacaaagagcagtgctagctacagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaattaacaacaaaattg +aaggagtacgggctaaaaccaacccgtcctgacaaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagccgcgttgcatggtccatcattctacagtaggatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagcaattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaacaatttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaatattgttgtccagtgtca +gaatgggcgcgtcactcttgatggtgagttgatgggcactacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gctagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatactacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcattagagatttct------------actgaatc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcaactccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatatcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcataactatagccaagaatggtgactctccaataaccgtccctccaaatggatattttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +aattc---------aataatggctggagcttttatagcaggattggctggtgacatgttcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacg-aatca--------- +aa-------------ctgtgcacagatctacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtggatcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgttcgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatcccttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgtctaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------at------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305542.1/1-7523 |Norovirus GII isolate PNV018146 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------gatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccattccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctatcactatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatttctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgactg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggtttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcttccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaacgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctgacaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagggtcgttctgtgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccacaggctcccttattgcccgggcatcagggctactccacgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaagt +atgggttaatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagtgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccttgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gacgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggaacaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +agatccactggagaactcatgcccctagcagctaggatggggacccacgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggtgtgagggagaggctatacttgaaggtggtgac +aataaaggtacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggaccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagtcaaa +actgacaaaatttatagcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattat +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agggaatatgggttgaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaagctggagcagagttcg +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatttgagacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctaagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggaacccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caaccaatcaagtgac---cccaccatcaaactgatagcaatgttgtacacaccacttagagctaacaatgc +tggggacgacgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgttgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggagctttccttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccagtttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccatttttccacccct--------- +ca---------------------acccccgggggcgct---------------------------------g +ccaggaa----------------gagccaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctccccc------------------ag +cacatttt-----------ccaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305543.1/1-7510 |Norovirus GII isolate PNV004566 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgtt------------aacaac +a------ac----aacgacaccgcaaaaccttcaagtgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagcg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccccccactcaaccagagagagaatagagatgctaaggaaccact +gacaggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctattcac +cagacccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagactaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgattttctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaggcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaagctatgggctgacgatgacagaagcgtggact +acaatgagaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttc +ggagtccccatcaaacaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacagctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggcaaggacccc +agagtcaagggcggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttctcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactatccgaaatcacaaatttgtccccagatatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagaaaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcacttcacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggctagaatgtataa +tggttacgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcctagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcctaactgttgaagagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggaaatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcgaaa---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagtacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgttcttggcactggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +caacaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccta +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacgacgtacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305544.1/1-7528 |Norovirus GII isolate PNV011308 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aattctgtcaat +g------ac----agtattaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcctaaaatactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtgattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgagttctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaagcccccggcagctataagcttcgcgacgatagagctcacccccatatctttatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttattacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgctcttgacatacttaaattggt +catgaagtggtttttcccaaagaaagaggagaaagccgagatggagaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccatctcacgaccctcctcaaggacaaagacagtctcacggcttt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaaatcgtcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatccctcctacataaggctaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgccttaacactacaagaattagctgacacatgcccagttactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctaggagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctga +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatctctca +cccaggggtccctaaccgcaagggttgcaggccttgttcatgagaggaaggacgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagtgctcaaaaatgtcaaaactttggaagatctgaagaccg +ccttaagagatgtgaggttcaatgagtgtgaaataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtcccagactgcaaatgaagtgggctcagcac +tccttaggcttagacaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaattttccgcccgacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcagatgacactaggagtgtggact +acaatgagaggcttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaagcaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctccagaaggtactgtctgttctattctcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggggaggcagtccttgagggaaatgaa +aaccttggcacttactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagggaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgat +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccacac +catgtcaggaaaaatgaccactggaatggagagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcagaccttggtacgatgatcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatagccctcccatgcagagtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggacctcttggcgcccagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggcctttcaccagacgttgtccaagcccattcctgcttt +tcattctatggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccattcc +cagcgagccacccagctcatggcccttcttggtgaggcttcactgcatggtccccagttctacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggcgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaatcttgaattggggccagaactaaacccctacttgagtcatttgtcccgcatgtacaa +tggttatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacatttccccgtggacaatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggggaggacgtgttcactgtgtcctgcagggttttgactcgccccgctccagattttgaattcacattttt +agtcccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---ttcccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------ggaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggcacagtgttcggagtggctagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacatat +tgacacaactgacccaaagtatgcgcccaaattaggcacaattcttat---ca---------aatctgaatc +tactgattt---taatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ctaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacggatccttttcttcaggtctgtagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaacaagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaatataaagcaggggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcacactgctcc---------------------------a +ccaa-------------------aaggtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtatagctccccttcctctgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-cttcctct---t-ct-ccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305545.1/1-7518 |Norovirus GII isolate PNV007123 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------gctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggcttgcccgaactttccaccgtcagacaacc +ggaagaaaacaatacagccttcagtgttcccccactcaaccagagggaaaatagggatgctaaggagccact +gactgggacaattttggaaatgtgggatggagagatctatcattacggtctctatgtggagcaaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctatcaccactctccttgttctg +gagacctgtgtataccccac---aatacctcatttccccagacactctcaggaaattacacggggagtcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggaggatgatccagagaactactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagccaacgtattcctgtgtgctctatcttcactattcac +caggcccataaaagatataatagggaaactaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggtatagtggaatccctgatacttctggcggagctcttt---ggagtttactggacaccccc +agatgtgtctgcaatgattgcccccttactcggcgattacgagttgcaagggcctgaggaccttgcagtgga +acttgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttaagggcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +tatgaagtggttcttcccaaagaaacaggaagaaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccacattgctcaaggacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcaaaggaggagct +ttccagcagaccaagaccagttgtcctgatgatatcaggcagaccaggaatagggaagactcaccttgctag +agaagtggccaagagaatcgcatccaccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggaaagggtcgtcctatgggacgactacgggatgagtaatcccatcca +cgacgcactcaggctgcaagaactcgctgacacctgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattattaccactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccctgatgttgagaaggcga +aacgtgacttcccaggacaaccagacatgtggaagaacgccttcagttctgacttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacggaaacaccccgcacggaaagggcgtcatgaagacactca +ccactggctccctcattgcccgggcatcagggctacttcatgagaggatggatgagtttgaattacagggcc +cggctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgagagtcggaaggcagctcaaggaggttaaaaccatgccagatcttaaacagg +cactcaggaacatctcaattaagaagtgccagattgtgtacagtggttgtacttatgtacttgagtctgatg +gcaagggcaacgtgaaagttgacaaagttcagagcacctctgtgcagaccaacaacgagctgtccggcgccc +tacaccatctgaggtgcgccagaattaggtattacgttaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaataaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtcttagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactctatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgctagggcaactgaggaagacttctgtgaagaagaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggccgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcgaggatagtcaactttggctcgggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccacgtcataccccagggtgctaaagagttcttt +ggagtccctatcaagcagatccagatacataagtcaggcgagttttgtcgcttgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgagaattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccttacatctataagagggaaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaataccgtcatatgtgccacccagggaagtgagggggaggccacacttgaaggtagtgac +agtaagggaacatactgtggagcaccaatcctaggcccagggagcgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacttatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcagcaggttatgagggatcagttgaaaccatttacagaacccagaggc +agaccaccaaagccaagtgtgttggaagccgccaagaaaactattatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcattcgcgcaagcttgtgcgtccctcgataagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggtaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcgctcaaggacgaactagttaaa +actgacaaaatttatggcagaatcaagaagaggctgctctggggctcggacttagcgaccatgatccggtgc +gcccgagcgtttgggggcttaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcatgccagatacaagtaccattatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttagcatcagctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggttgatgtgggcgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggcgatgatgaaattgttagtacagatataaaactagatccagagaaattgacagcgaagctc +aaagaatatgggttgaaaccaacccgccctgacaagactaaaggaccccttgtcatttctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaagatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggagatgatgtcttcacggtctcttgtcgagtgctcacgaggccatcccctgattttgatttcatatttct +ggtaccgccaacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggagaggttgtacacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attatgca----------------- +----------------atgaatttggcctctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagagatggctcgacc--------cgc-----------ggccacaaagccacagt +gctcactgggagtgccgactttgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgagtctggcgaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggatggttccaccacccaccggaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttacccgggag +agcaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcggcacttctaccaagaggcagccccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcggtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaactctaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +tactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tctt---tttcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305546.1/1-7520 |Norovirus GII isolate PNV007866 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------acatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagcg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgatcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtaccttatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaagatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaacgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaactta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgggcaaaggaggaact +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcggcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgttatcattatcactactaatttggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgattttctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaggtctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgagttacagggcc +cggctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgttaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtatagtggttgtacctacacactagagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtattatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacctatggt +ctaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +tcaggaaaagaaacccagaagacttcaagcccaaggggaagctatgggctgacgatgacaggagcgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +agaactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcacaaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttctcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccagggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccagatacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgagatcacaaatttatccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccgacccgccctgataaaactgaaggacctcttgttatttctgaagatttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttcg +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcacttcacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattttcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatcccatttggctagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaatgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaagtcaccatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggaagatgtcttcacagtctcttgccgagtcctcacaaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcctaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggaaatggctcgacc--------cgt-----------ggccataaagctacagt +ttacaccgggagtgccccctttactccaaagctgggcagtgttcaattcgaaa---------ctgacacaga +caatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcgtccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagctcccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgctgcacttctaccaagaggcagccccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaaccaattctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttccctaatcaatgccgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +caacaagcttcctttcagtttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccta +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttagattggagcgga +acaaggtactgggcccctgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacact---------------------------------g +ccaggaa----------------ggatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +tatatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtagtgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------ctttt- +---------------------tcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305547.1/1-7529 |Norovirus GII isolate PNV011149 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aattctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcctaaaatactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------gctgta +cagtttgatg----------caaaatcggaaactgtgattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgagttctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaagcccccggcagctataagcttcgcgacgatagagctcacccccatatctctatactg +gaggcctgtctacaccccca---gctacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +cag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttattacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctgataggtgattttgaattgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgctcttgacatacttaaattggt +catgaagtggtttttcccaaagaaagaggagaaagccgagatggagaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccatctcacgaccctcctcaaggacaaagacagtctcacggcttt +catgaagaccctggatctagaagaagagaaggcaaggaagctatccaccaaatcgtcctcgccggacatcgt +cggcactatcaatgccatactggctagaatagctgccgctagatccctcctacataaggctaaagaagagat +gttcagtaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcctacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgttaa +agatgccttaacactacaagaattagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaggactatttcaaacaagacttttcccatataaagctga +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatctctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggacgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagtgctcaaaaatgtcaaaactttggaagatctgaagaccg +ccttaagagatgtgaggttcaatgagtgtgaaataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtcccagactgcaaatgaagtgggctcagcac +tccttagacttagacaagcaagggctagatattatgtcagctgtttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcctga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctgtgggcagatgacactaggagtgtggact +acaatgagaggcttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctccagaaggtactgtctgttctattctcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggggaggcagtccttgagggaaatgaa +aaccttggcacttactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaaaaccaag +ttttggcgctcatcaccagatgccctacctcctggtacgtatgaacctgcttacctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagggaccagctgaagccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgccaaaccatggacctactcacaagcatgtgcctcactggacaagaccacttctagtggaagcccacac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatggggatcagaccttggtacgatgatcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatagccctcccatgcagagtggggatg +aacatgaatgaggatggtcctatcatatttgacaaacactccaagtataggtaccattatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggacctcttggcgcccagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggcctttcaccagacgttatccaagcccattcctgcttt +tcattctatggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccattcc +cagcgagccacccagctcatggcccttcttggtgaggcttcactgcatggtccccagttctacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggcgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgctcctaaatcttgaattgggcccagaactaaacccctacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacatttccccgtggacaatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattttt +agtcccaccaactgttgaatcaaaaacaaaaccctttactttacctattctaacccttggtgagttgtctaa +ttcccgt---ttcccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------ggaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgatattcctgc +agtcctgggggctattgacttcaaaggcacagtgttcggagtggctagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcgcccaaattaggcacaattcttat---ca---------aatctgaatc +tactgattt---taatacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgacc------ctaaatatgaaccttgcccccgctgtttccccatctttccctggtg +aacggatccttttctttaggtctgtagtaccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaatataaaacaggggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccccccagcacactgctcc---------------------------a +ccaa-------------------aaggtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ccagtgtgtatagctccccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggactagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-cttcctct---t-cctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305548.1/1-7525 |Norovirus GII isolate 55HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatactacttgctgaactcctc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaggagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaaaaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttggggacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacctatcctaggccctgggggtgcaccaaaactgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaggcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactaaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattgtcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataaccgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctccgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctactcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagat-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305549.1/1-7515 |Norovirus GII isolate 92HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacgatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgctcgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaatagaaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcactcggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggtcctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaggctgtctaccaaatcatcctcaccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcaggtaggcctggcattggcaaaacccacatggcgag +acacttggccaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgtccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagtag +cactgagggatgtgaaattcaatgagtgtgagataatttacaaaaactccaaataccgagtctcttccaatg +gtaaaggctctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggcgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaagcgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgacgaggagtatgatgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacggaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaggagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgagggggcaacactgtcatatgtgccactcaagggcaggatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcacgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcataaccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcagaggagcattctctcggccgctatggaagtgatgg-ttcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctgaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgttgtcggccaacaaaatgtaattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccagatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtcc------gt----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccccgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacaa--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagcatgaagacaactagttattcggg-ccagttttccagcaaccccgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggacccccatgt------------tcaatacccataggcagcctctcttcgctc +acgtgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305550.1/1-7503 |Norovirus GII isolate 99HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaataacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggacttaagaaaa----tgctgggcgccgtacccaaaggtgcc-------------aaagcgccc +agcagtaa----------------tcaaaattgccccacagttaagatcgggcctaaaacgttgacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattgggctaccagacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccctccattaagtgagagggagcacaggccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagtgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctagcgacgatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---actacttggtctctccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaataactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---tagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaatagaaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaatgcgatcctctgtgcactcggttcgctgttttc +aaaaccaatcaaagacctattaggtaaactcaagcccttgaatctactgcacttgctcgcgtcctgtgattg +gacgtttgcaggcatagtggagacagtcatcttaatggcggaacttttc---aacgtattctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaactacaagggcctgaagacctggctgtaga +actcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacgacccttctcaaggacaaagacagcctcacagcttt +catgaagaccttggatctagaagaggagaaggcgagaaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatattagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagtagaatcagaccagtggtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +gcacttggctaagagcatcgccaacaccatgagtggcgatcagagagtcggactcgttccacgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgtccagtcactttgaattgtgataggattgagaataa +gggaaagatgtttgatagcgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgattatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttagaccagatttttcccatattaagttga +ctctagccccccagggtgggtttgacaaaaatggcaataccccacatggcaagggtaccatgcggtccttaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagggacgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcatttagaaaattggctgcagataacaagt +atgggatcatggagacgatgagagttggtgcagcgctcaagagtgtgaagaccttggaagatcttaaagctg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaacg +gcaaaggctcggtttctgttgacaaagttgaagacaatgcctcccaggctgtgaacgaggtgcattcagcac +ttcttagactcaggcaggcaagggccagatactacatcagctgcttccaagacctcgtttacactctcatgc +aggttgccggggcatcattcgtcgtca---------------gtagga------tctccagaagattctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaagtgaatgagcccga-----aaagg +aagtggcccaaggtg---gatgggaaattgagcccaaggacacagaaccggaaggtaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggcctgagtgatgaagagtacgatgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaggtggcagttgctcgggcgacagaggaggacttctgtgaagaggaagaagccaaaataagacaaa +gaattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagaggagacccgacgacttccaaccaaagggcaacctatgggcagatgacaccagaagtgtggact +acaacgagaggcttgattttgaagcacccccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggtcaaggaactcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttaggtttccaagacccatc +aggccagatgtcacaggactcgtgctggaggaaggagccccagagggcactgtctgttctgtacttgtaaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacgcacgcatccatgaaaatacagggcagg +accgttggtggccaaatggggatgctcctcacaggagcaaacgcgaagaacatggacctcggtactggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacatagttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgtcatatgcgccacccaagggcaagacggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattctgggtcctggcaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagacccc +agggtggaaaaaggtccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccgcccagacctgcagtcctggaggaagcaaagaagacagtgatgaatgttttagaacaaaccattgac +cccgccaagccatggtcctactcccaggcatgtgcctcacttgacaaaaccacctctagtggtagtcctcac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggcagcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcgagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctctctgccgctatggaagtaatgg-tgcggttttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggctcctagccagcttgacgttggcgacttt +gtcatctcagtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctgactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttacggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgataaaactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctccgtaggtcgattgctcgggacccagctggttggtttgggaaactggaccaagactca +attctcaggcagctatactggacaagggggcctaaccatgagaacccgtatgagagcatggtccctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcgctgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaacgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagagttgaacccttatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggctcccatacgaaaatttgtcaccttcacaaattacaatgtgcccccacgt +tataattgatgttagacaattagaaccagtcctattacctatgccagatattagaaataatttcttccatta +caatcagggtaatgat---ccaaaattgaggttggtagctatgctctacactcctttaagggctaacaattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggttccccccacagttgaatccaagaccaagcaattcacattgcccatcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtgccggtggaaatgatgtacacagcaaggaatgaaaatcaagttgtccagccaca +aaatggtagggtcacactcgatggcgagctattgggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggtcatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccactgaagatacacctgg +tcccattggatcacctgattttcaaggtatactctttggtgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +caatactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcatcagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggtg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccctttattcccaggtg +agcagattctgttctttagatcacaaataccca------gttcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagagtgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggtagagtcctctttgaggccaagctacacaa +gcaaggctttataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtatttcagatt +tgaagcctgggtcaatcagttttactcactcgcccccgtgggaactgggaatgggcgtagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccacgataaagaaatgctccaa +gcccaaattgaagccactaaacgtttgcaacaagagatgattgacataaaacaaggggtgctgacggctgcg +ggattctctcccacggatgccgcgaggggctctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggctcctggtgccatgaggacaacaggctattcagggactttcactcacttgccccctatg +ca-----------gcctacttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaactttttaaag----------------------------------- +----------------------------------------tagatccttctccttc---------------- +---ttctt-----------caagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactgctctctcggg-cacttcaag--------gg +tggactc----t---ccatc-------------------ccagtcaaccctgt---------cgaccagacc +gagctc-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatctagcag +ggtatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccgctcttcgccc +acctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagatta-------- +-------att-aggaaagcttgattagttt-----ccttttc------ta-ttattcct---ttaatttttc +t------------ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305551.1/1-7515 |Norovirus GII isolate 103HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacgatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgctcgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaatagaaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaggctgtctaccaaatcatcctcaccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggaccagacccgtggttgtcatgatctcaggtaggcctggcattggcaaaacccacatggcgag +acacttggccaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactga +ctctagccccacaaggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatacaactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagtag +cactgagggatgtgaaattcaatgagtgtgagataatttacaaaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaagcgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgacgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggcaacactgtcatatgtgccactcaagggcaggatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcataaccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcagaggagcattctctcggccgctatggaagtgatgg-ttcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgttgtcggccaacaaaatgtaattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatatc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccagatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtcc------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccccgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacaa--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagcatgaagacaaccagttattcggg-ccagttttccagcaaccccgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaac----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggacccccatgt------------tcaatacccataggcagcctctcttcgctc +acgtgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305552.1/1-7500 |Norovirus GII isolate 168HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaataacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggacttaagaaaa----tgctgggcgccgtacccaaaggtgcc-------------aaagcgccc +agcagtaa----------------tcaaaattgccccacagttaagatcgggcctaaaacgttgacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattgggctaccagacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccctccattaagtgagagggagcacaggccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagtgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctagcgacgatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---actacttggtctctccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaataactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---tagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaatagaaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaatgcgatcctctgtgcactcggttcgctgttttc +aaaaccaatcaaagacctattaggtaaactcaagcccttgaatctactgcacttgctcgcgtcctgtgattg +gacgtttgcaggcatagtggagacagtcatcttaatggcggaacttttc---aacgtattctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaactacaagggcctgaagacctggctgtaga +actcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacgacccttctcaaggacaaagacagcctcacagcttt +catgaagaccttggatctagaagaggagaaggcgagaaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatattagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagtagaatcagaccagtggtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +gcacttggctaagagcatcgccaacaccatgagtggcgatcagagagtcggactcgttccacgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgtccagtcactttgaattgtgataggattgagaataa +gggaaagatgtttgatagcgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgattatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttagaccagatttttcccatattaagttga +ctctagccccccagggtgggtttgacaaaaatggcaataccccacatggcaagggtaccatgcggtccttaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagggacgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcatttagaaaattggctgcagataacaagt +atgggatcatggagacgatgagagttggtgcagcgctcaagagtgtgaagaccttggaagatcttaaagctg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaacg +gcaaaggctcggtttctgttgacaaagttgaagacaatgcctcccaggctgtgaacgaggtgcattcagcac +ttcttagactcaggcaggcaagggccagatactacatcagctgcttccaagacctcgtttacactctcatgc +aggttgccggggcatcattcgtcgtca---------------gtagga------tctccagaagattctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaagtgaatgagcccga-----aaagg +aagtggcccaaggtg---gatgggaaattgagcccaaggacacagaaccggaaggtaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggcctgagtgatgaagagtacgatgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaggtggcagttgctcgggcgacagaggaggacttctgtgaagaggaagaagccaaaataagacaaa +gaattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagaggagacccgacgacttccaaccaaagggcaacctatgggcagatgacaccagaagtgtggact +acaacgagaggcttgattttgaagcacccccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggtcaaggaactcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttaggtttccaagacccatc +aggccagatgtcacaggactcgtgctggaggaaggagccccagagggcactgtctgttctgtacttgtaaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacgcacgcatccatgaaaatacagggcagg +accgttggtggccaaatggggatgctcctcacaggagcaaacgcgaagaacatggacctcggtactggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacatagttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgtcatatgcgccacccaagggcaagacggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattctgggtcctggcaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagacccc +agggtggaaaaaggtccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccgcccagacctgcagtcctggaggaagcaaagaagacagtgatgaatgttttagaacaaaccattgac +cccgccaagccatggtcctactcccaggcatgtgcctcacttgacaaaaccacctctagtggtagtcctcac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggcagcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcgagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctctctgccgctatggaagtaatgg-tgcggttttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggctcctagccagcttgacgttggcgacttt +gtcatctcagtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctgactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttacggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgataaaactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctccgtaggtcgattgctcgggacccagctggttggtttgggaaactggaccaagactca +attctcaggcagctatactggacaagggggcctaaccatgagaacccgtatgagagcatggtccctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcgctgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaacgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagagttgaacccttatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggctcccatacgaaaatttgtcaccttcacaaattacaatgtgcccccacgt +tataattgatgttagacaattagaaccagtcctattacctatgccagatattagaaataatttcttccatta +caatcagggtaatgat---ccaaaattgaggttggtagctatgctctacactcctttaagggctaacaattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggttccccccacagttgaatccaagaccaagcaattcacattgcccatcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtgccggtggaaatgatgtacacagcaaggaatgaaaatcaagttgtccagccaca +aaatggtagggtcacactcgatggcgagctattgggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggtcatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccactgaagatacacctgg +tcccattggatcacctgattttcaaggtatactctttggtgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +caatactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcatcagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggtg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccctttattcccaggtg +agcagattctgttctttagatcacaaataccca------gttcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagagtgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggtagagtcctctttgaggccaagctacacaa +gcaaggctttataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtatttcagatt +tgaagcctgggtcaatcagttttactcactcgcccccgtgggaactgggaatgggcgtagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccacgataaagaaatgctccaa +gcccaaattgaagccactaaacgtttgcaacaagagatgattgacataaaacaaggggtgctgacggctgcg +ggattctctcccacggatgccgcgaggggctctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggctcctggtgccatgaggacaacaggctattcagggactttcactcacttgccccctatg +ca-----------gcctacttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaactttttaaag----------------------------------- +----------------------------------------tagatccttctccttc---------------- +---ttctt-----------caagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactgctctctcggg-cacttcaag--------gg +tggactc----t---ccatc-------------------ccagtcaaccctgt---------cgaccagacc +gagctc-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatctagcag +ggtatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccgctcttcgccc +acctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagatta-------- +-------att-aggaaagcttgattagttt-----ccttttc------ta-ttattcct---ttaatttttc +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305553.1/1-7496 |Norovirus GII isolate 170HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcctaaacagcct-gccccgagagacgaaccacga +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggctaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggttatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggatgagaccagtagttgttatgatatcaggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccgcaatcaccaccttcaatttcgaccggaacagaatcacatcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccatcggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccagggga +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttccttcgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccactcagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggtaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcgaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +accaggctatgttacagtggctcacactggccaacatgatttggttatcccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305554.1/1-7515 |Norovirus GII isolate 182HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagcgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatccctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaacagttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcgtcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagtaggatcagacccgtggttgtcatgatctcgggtaggcctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cacaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagttg +cactgagagatgtgaagttcaacgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcagaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggaatatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +ataacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgccttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagttaaaacctttcacagaacccaggggc +aagccacctaggcctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +accgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagacgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtatggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggccctcaattttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggccctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgttcacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccgactgtggagtcaaagaccaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggcacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaaggaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaacggttacttcaggtt +tgaggcctgggtcaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaagggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttctcccctgcagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttccgcatctactgttccttcac----------------- +---------------------aatcaactca---atcaacggttttgactg-------cggg--------gt +ctagctc----a---tccag-------------------gacaacatcttctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgccc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305555.1/1-7528 |Norovirus GII isolate 194HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcagcaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaaggtcgggcccaaaacactgacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------taaaatcggaaactgtgattgggataccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgcccagacacactaaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccaaccgtagatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctactaggcaagctcaaaccattgaacttactacacctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcaattgaggatgccgt +cctagatatggaggccataggcaacaaccacctcacaaccctcctcaaggataaagacagtctcacggcctt +tatgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcaccggatatcgt +tggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggattagaccagtggttgttatgatctcaggcagacctggcattggaaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagagtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcatg-ttctagaaggattgatttcttggtctatgcagaatcaccagagattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcgggtttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctca +cccaggggtccctgaccgcaagggtcgcaggccttgttcacgagagaaaggatgagttccagttacaaggga +atgacctccagacatataactttgacaccaacagggtctctgcgttcagaaaactggctgcagacaacaagt +acggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaggtcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactccaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgttagctgtttccaagatctcgtctataccctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctcaaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagaccga-----aaagg +aagtggctcaaggta---gatgggagatagagcccaaagacacagaacccgaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatattccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaaggaaagaggaaaggggggtacttggcttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaaatcaaacaaattcaaatccacaagtctggagaattctgcaggtttaggttcccaagaccgatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgtcaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtctatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gctcgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcgtcaccagatgctctacctcctggcacgtatgagcctgcttatctggggggtaaggacccc +agagtggaaaaggggccctccctacaacaagttatgagagaccagctgaaaccatttacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacctctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatctaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagaaaataaagaagagacttctatgggggtcagaccttggcacgatggtcaggtgt +gccagggcttttggtggccttatggacagtatgaaagcaagttgtatatcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggaacattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgagccagaact-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgacttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcgcaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgatatcaaccttgatcccatgaaactgacacaaaaactc +agggagtatggtctggttcccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggacccagctggatggtttggaaaattggaccaagactca +atcctcaggcaattatactggacaagggggcccaaccatgaaaacccatacgagagcatggttccccactcc +cagcgagccactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttcttaatcttgaattgggcccggaacttaacccctatttgagtcacttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaagacacc---ccccggatgaggcttgtggctatgctctacacgcctctaagggc---taattc +aggagaggatgtgttcactgtgtcttgtagggttttgactcgccccgctccagattttgaatttacattctt +ggttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgaccccaatgaatcaatagtcgttcagcccca +aaatggtagatgcacccttgatggcacgctgcagggcacaacacaactggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatttaacag--- +--attccccccag--------agagcccgta----------------atcatccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggcaagccaga---gggatgtctctgggac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgata---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctgaacatgaaccttgcccctgctgtttccccagctttccctggtg +agcgaatccttttctttcggtctatagtgccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcatag +agaagggttcctcaccgtggctaattctggaaataatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaagagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgccccaatgacaaaaatattggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagttactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtatgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggac----g---tctag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-cttcttct---t--tcccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305556.1/1-7515 |Norovirus GII isolate 203HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagcgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatccctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaacagttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagtaggatcagacccgtggttgtcatgatctcgggtaggcctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaagaccatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cacaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagttg +cactgagagatgtgaagttcaacgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaagcgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgacgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgccttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaagggccatccctgcagcaagtcatgagggaccagttaaaacctttcacagaacccaggggc +aagccacctaggcctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +accgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagacgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtatggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcacggccctcaattttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgttcacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccgactgtggagtcaaagaccaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagcggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaaggaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaacggttacttcaggtt +tgaggcctgggtcaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaagggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggttttgtccgctggc +ggcttctcccctgcagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcctactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaactaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---atcaacggttttgactg-------cggg--------gt +ctagctc----a---tccag-------------------gacaacatcttctt---------ctgcagcagc +ttctac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcac------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgccc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305557.1/1-7496 |Norovirus GII isolate 211HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +agacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggattagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggtatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccagacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaagggagtgatgaaaaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaggatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacatctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcacaacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggtcgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctatcctaggccctgggagtgcaccaaaattgagcaccaaaaccaag +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaggcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcgtcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactaaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattgtcagtgaagacttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggaggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccgca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgcggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagggttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggctgccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctccgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagccaatcttaggg--------------atgc---------------- +------------------------------tgcccctactcggggacccttc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305558.1/1-7520 |Norovirus GII isolate 249HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcctaaacagcct-gccccgagagacgaaccacga +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggctaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggttatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +gtctagcaggatgagaccagtagttgttatgatatcaggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccgcaatcaccaccttcaatttcgaccggaacagaatcacatcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccatcggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccagggga +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttccttcgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcagggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccactcagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggtaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcgaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +accaggctatgttacagtggctcacactggccaacatgatttggttatcccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305559.1/1-7515 |Norovirus GII isolate 268HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacgatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgctcgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaatagaaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggtcctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaggctgtctaccaaatcatcctcaccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcaggtaggcctggcattggcaaaacccacatggcgag +acacttggccaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccgcgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgtccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgtacatgagaggagagacgagtttcagctccagggga +acgacctccaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagtag +cactgagggatgtgaaattcaatgagtgtgagataatttacaaaaactccaaataccgagtctcttccaatg +gtaaaggctctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaagcgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgacgaggagtatgatgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaggagaagaccagatgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggcaacactgtcatatgtgccactcaagggcaggatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcataaccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcagaggagcattctctcggccgctatggaagtgatgg-ttcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgttgtcggccaacaaaatgtaattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccagatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtcc------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccccgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacaa--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaactagttattcggg-ccagttttccagcaaccccgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggacccccatgt------------tcaatacccataggcagcctctcttcgctc +acgtgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305560.1/1-7520 |Norovirus GII isolate 278HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaagacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggtgtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------attagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaaccgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacgcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattagaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttggaa---------ctgacacaga +ccatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcagcaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tatccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtagaaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---aacc------------------------------aaggca---cagtctcgaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305561.1/1-7514 |Norovirus GII isolate 291HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaaaatcgggaccaagacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagcgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacactgccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaacagttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgaaaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaacttgt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagtaggatcagacccgtggttgtcatgatctcaggtaggcctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgaccattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagcaagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgatcttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcggacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagttg +cactgagagatgtgaagttcaacgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaatatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcagaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaagca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtttcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagactaag +ttctggcgttcatcaccagacgccttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctaggcctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +accgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatggtcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtatggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggcccttctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaaaatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccgactgtggagtcaaagaccaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctccgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttact------cttaacatgaatttggcccctgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaaggaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaacggttacttcaggtt +tgaggcctgggtcaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttctcccctgcagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggttttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcttctt---------ctacagcagc +ttccac-------------------ccc--------------atccaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacctataggcagcctctcttcgccc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305562.1/1-7503 |Norovirus GII isolate 292HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaataacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggacttaagaaaa----tgctgggcgccgtacccaaaggtgcc-------------aaagcgccc +agcagtaa----------------tcaaaattgccccacagttaagatcgggcctaaaacgttgacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattgggctaccagacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccctccattaagtgagagggagcacaggccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagtgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctagcgacgatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---actacttggtctctccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaataactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---tagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaatagaaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaatgcgatcctctgtgcactcggttcgctgttttc +aaaaccaatcaaagacctattaggtaaactcaagcccttgaatctactgcacttgctcgcgtcctgtgattg +gacgtttgcaggcatagtggagacagtcatcttaatggcggaacttttc---aacgtattctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaactacaagggcctgaagacctggctgtaga +actcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacctagggaactacgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacgacccttctcaaggacaaagacagcctcacagcttt +catgaagaccttggatctagaagaggagaaggcgagaaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatattagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagtagaatcagaccagtggtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +gcacttggctaagagcatcgccaacaccatgagtggcgatcagagagtcggactcgttccacgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgtccagtcactttgaattgtgataggattgagaataa +gggaaagatgtttgatagcgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgattatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttagaccagatttttcccatattaagttga +ctctagccccccagggtgggtttgacaaaaatggcaataccccacatggcaagggtaccatgcggtccttaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagggacgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcatttagaaaattggctgcagataacaagt +atgggatcatggagacgatgagagttggtgcagcgctcaagagtgtgaagaccttggaagatcttaaagctg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaacg +gcaaaggctcggtttctgttgacaaagttgaagacaatgcctcccaggctgtgaacgaggtgcattcagcac +ttcttagactcaggcaggcaagggccagatactacatcagctgcttccaagacctcgtttacactctcatgc +aggttgccggggcatcattcgtcgtca---------------gtagga------tctccagaagattctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaagtgaatgagcccga-----aaagg +aagtggcccaaggtg---gatgggaaattgagcccaaggacacagaaccggaaggtaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggcctgagtgatgaagagtacgatgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaggtggcagttgctcgggcgacagaggaggacttctgtgaagaggaagaagccaaaataagacaaa +gaattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagaggagacccgacgacttccaaccaaagggcaacctatgggcagatgacaccagaagtgtggact +acaacgagaggcttgattttgaagcacccccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggtcaaggaactcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttaggtttccaagacccatc +aggccagatgtcacaggactcgtgctggaggaaggagccccagagggcactgtctgttctgtacttgtaaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacgcacgcatccatgaaaatacagggcagg +accgttggtggccaaatggggatgctcctcacaggagcaaacgcgaagaacatggacctcggtactggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacatagttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgtcatatgcgccacccaagggcaagacggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattctgggtcctggcaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagacccc +agggtggaaaaaggtccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccgcccagacctgcagtcctggaggaagcaaagaagacagtgatgaatgttttagaacaaaccattgac +cccgccaagccatggtcctactcccaggcatgtgcctcacttgacaaaaccacctctagtggtagtcctcac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggcagcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcgagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctctctgccgctatggaagtaatgg-tgcggttttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggctcctagccagcttgacgttggcgacttt +gtcatctcagtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctgactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttacggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgataaaactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctccgtaggtcgattgctcgggacccagctggttggtttgggaaactggaccaagactca +attctcaggcagctatactggacaagggggcctaaccatgagaacccgtatgagagcatggtccctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcgctgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaacgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagagttgaacccttatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggctcccatacgaaaatttgtcaccttcacaaattacaatgtgcccccacgt +tataattgatgttagacaattagaaccagtcctattacctatgccagatattagaaataatttcttccatta +caatcagggtaatgat---ccaaaattgaggttggtagctatgctctacactcctttaagggctaacaattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggttccccccacagttgaatccaagaccaagcaattcacattgcccatcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtgccggtggaaatgatgtacacagcaaggaatgaaaatcaagttgtccagccaca +aaatggtagggtcacactcgatggcgagctattgggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggtcatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccactgaggatacacctgg +tcccattggatcacctgattttcaaggtatactctttggtgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +caatactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---ccaggtgcatcagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggtg---accctt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccctttattcccaggtg +agcagattctgttctttagatcacaaataccca------gttcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagagtgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggtagagtcctctttgaggccaagctacacaa +gcaaggctttataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtatttcagatt +tgaagcctgggtcaatcagttttactcactcgcccccgtgggaactgggaatgggcgtagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccacgataaagaaatgctccaa +gcccaaattgaagccactaaacgtttgcaacaagagatgattgacataaaacaaggggtgctgacggctgcg +ggattctctcccacggatgccgcgaggggctctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggctcctggtgccatgaggacaacaggctattcagggactttcactcacttgccccctatg +ca-----------gcctacttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaactttttaaag----------------------------------- +----------------------------------------tagatccttctccttc---------------- +---ttctt-----------caagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactgctctctcggg-cacttcaag--------gg +tggactc----t---ccatc-------------------ccagtcaaccctgt---------cgaccagacc +gagctc-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatctagcag +ggtatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccgctcttcgccc +acctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagatta-------- +-------att-aggaaagcttgattagttt-----ccttttc------ta-ttattcct---tcaatttttc +t------------ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305563.1/1-7515 |Norovirus GII isolate 331HBO nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggagacc-------------aaagcaccc +aatagtgg----------------tcaacactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacgatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgctcgagctcaatgacacgtggct +tag---cagaagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaatagaaaacccct +tccaactgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggtcctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggacagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaggctgtctaccaaatcatcctcaccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggaccaggcccgtggttgtcatgatctcaggtaggcctggcattggcaaaacccacatggcgag +acacttggccaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcacggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagtttcagctccagggga +acgacctccaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagtag +cactgagggatgtgaaattcaatgagtgtgagataatttacaaaaactccaaataccgagtctcttccaatg +gtaaaggctctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatgc +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaagcgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgacgaggagtatgatgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctacctaaggggattaatgaactcttt +ggagtagagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgattgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggcaacactgtcatatgtgccactcaagggcaggatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttacgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcataaccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcagaggagcattctctcggccgctatggaagtgatgg-ttcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgttgtcggccaacaaaatgtaattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagctcaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgattgacatgttgtatactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatgggacacttcaagggaccacccaactggtacccacccagatttgctcctt +caggg-----------------------------------------gcacgctaattggtcag--------- +----------acgtcgaggtcc------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccctgcagttgcccccgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattcttcacactcacccccatgggaactggacaggggcgcaga---------ag +aattc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +ggatccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacaa--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagcatgaagacaaccagttattcggg-ccagttttccagcaaccccgtgca +ta-----------ggcagcccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattttg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggacccccatgt------------tcaatacccataggcagcctctcttcgctc +acgtgcgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305564.1/1-7491 |Norovirus GII isolate 522SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattttccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaaggc------accgtg +cagtttgatg----------cgaagtcagaaactgtgcgtgggctaccagacttaacaacggt---gcaaaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggcggcaaagc +cctaggggttcacaagccccctgcagcaataagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +tccctacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctccaggactaccggcttcttcaaaccatatcaatcttggaacaggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttctc +aaaaccaatcaaagacctgttgggcaaacttaaaccattaaacttgctgcacttgctcgcatcatgtgattg +gacgtttgcgggtatagtggagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggacgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacctggggaattatgcccttgacatattaaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaatcatctcacaaccctcctcaaggataaggacagcctcacggcttt +catgaaaactctggacctagaagaggagaaggcaaggaaactgtctaccaaatcatcctcgccagacatcgt +cggcactatcaatgccatattggccagaatagctgctgccaggtccctcctacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacctggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcggagtcaccagagattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccggacttctcccacataaagctga +ctctagcccctcagggcggattcgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagagaagagatgagtttcagctccagggga +acgactttcaaacatacaactttgacaccaacagggtctccgcatttaggaggctggccgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctgaaaattg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaacg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggctcagcac +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagatctcgtctacactctaatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaagaggttctgtt +gggagagatgggtcaaaccaaccgaagc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacgggaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgtcctacaaagaaacaaaggaaggaagaaaggggggtgcttggtttggttactggttcagaca +tcaggaagaggagaccagacgattttcaaccaaagggcaatctgtgggcagacgacaccagaagtgtggact +acaacgagaggcttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacgacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagatccaaattcataagtctggagagttttgcaggttcagattcccaaggccaatc +aggccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaaaaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaaggacaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagtacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctgggaggcaaggatccc +agagtggaaaaaggaccgtccctgcagcaagtcatgagggaccaactaaaacctttcacagaacccaggggc +aaaccacctagacctgcggtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaagaaagatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagcttgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacaatgatcaggtgc +gccagggcctttggtggtcttatggatagcatgaaggcaagttgtatagccctcccgtgcagggtagggatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcgccagatgttgttcaagcccactcctgtttc +tcattttacggcgatgatgagatcgtcagcactgatatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggtctggtccccacccgacctgacaaaactgaaggccccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgagacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttatactggacaaggggccccaatcatgagaatccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggcgaggcttcactgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaacttaacccctatctaagccatttgtcccgtatgtacaa +cgggtatgctggtggtatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aatcgttgatgtgagacaacttgaaccagtacttctgcccctccctgacataagaaacaggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttatacccccctgagggc---taactc +tggtgaggatgtgtttactgtctcttgtagggtcttgacccgccctgcccctgattttgaatttactttctt +ggtgccaccaactgttgaatcaaagaccaaaccttttacactgcccatattaactcttggtgagctatctaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcacgctgcaaggcaccacacaactggtccccacccaaatttgtgcctt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcgaccg--- +--actcagtccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggaccgtctttggggtggccagtcaga---gagacgtgtcagggag +-----tc---aagtgggg---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactgggatccatcctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtgc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcggttgctcctgcttttccgggcg +agaggattcttttcttcaggtcaatagtccctt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctatcaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaataaccccattgttgtcccccccaatgggtatttcaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcaattaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcagacgctgctagaggggccgtcaacgccccaatgacaaagatcctggactggaatggc +accaggtactgggcaccaaacagcatgaaaactacaagctactcagg-acagttttctagcagccctgttca +ta-----------agtcccctgcttcctcccagcatgtcgctcc---------------------------a +tcaa-------------------agggtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagcttcccctcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ctgggtc----t---tccag-------------------gtccatcaccacat---------ccacaacaac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +acctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttc------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305565.1/1-7493 |Norovirus GII isolate 735SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------------tgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaacatccc +ccc-----------------------------ccccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaattaacaccactctccttgttctg +gagacctgtgtatattcctc---agtacctcatctctccagacgctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactacggatgactccaaactaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaaactaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccactttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggtagaccaggaatagggaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaacttgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +agcgtgacttcccaggccaacctgacatgtggaagaacgttttcatttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaagggtgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccacgagaggctagatgaatttgagctacagggcc +caactctcaccaccttcaactttgatcgtaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtacagaccaacaatgagctgactggcgccc +tgcaccacctaaggtgcgccagaatcagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcgaggacgggtgcccaaaacccgaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggagactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaagagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacattactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctatacttgaaggtggtgac +aataaggggacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacccggtacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagagatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcattcgcacaagcgtgcgcatcccttgacaagactacttccagtggccatccccat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaggctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccattatcttcgagaggcattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacagcagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctctgaagtcacaaatttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggagtatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +attttcagcagtcccaccaaatttcccaaccgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcaatcaaatgat---cccaccatcaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgactttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaagagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctgggaactccagatttcgtgggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgact--------cgc-----------ggccacaaagccacagt +gagcactggaagtgtccactttaccccaaagctgggcagtgttcaattctcca---------ctgatacaag +caatgactt---tgaaactggccagaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggatggcagtaccacccaccaaaatgaaccccaacaatgggtgcttccaaa +ttattcaggtaga-gatggt------cacaatgtacacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatccctcccaatggctattttagatt +cgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaagttg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgaaacggatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggaccacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accctcggggacacc---------------------------------g +ccaggaa----------------gaaccaatctcagggctac------------------------------ +------------------------------tgcccccgctcggggctcctcc------------------ag +cacacctt-----------ctagc------------acttctactgctgctt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaatcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305566.1/1-7519 |Norovirus GII isolate 899SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggcccggcctaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aagagaatacc +ccc-----------------------------tcccccgcctaatggc------gaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcctgagctcacgacagttccccaacc +gaatgtgaccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgtt +gactggggcaatactagagatgtgggatggagagatataccactatggtttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagtatggcaaaggtggaaatgacgccgctgtcattgtactg +gcgtgtggtgtacacccctc---aatatctcatctcccctgacactctcaagagactcaacggggaggcatt +cccttacactgcctttgacaacaactgttatgccttttgttgctgggtgttagatcttaatgactcatggct +cag---cagaaggatggtgcaaagaacaacgggcttcttcagaccctaccaagagtggaacaggaaacccct +acccaccatggatgactcaaagattaagaaggtggcaaacattttcttatgttcactgtccacgctgttcac +cagacctataaaagacatcatagggaaaatcaaaccactaaatatcttgaacattctggcaacgtgtgactg +gacgttcgccggaatcgtagagtctctaatattgcttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggcgaatacgagctgcaagggccagaagatatcgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcatcagcagcatcaaccctcagggcttgcaaagaccttggtgcttatggtttagagatactcaaactggt +catgaaatggttcttcccaaagaaagaagaggtcaatgaactagccatggtgagagcaatagaggatgctgt +actagatcttgaagcgatagaaaacaatcacatgacagctctgctgaaagataaggacagccttgcaaccta +catgaaaacactggatctagaggaagagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcggcggctagatcactagtccatagggccaaggaggagct +atccagcaggatcagaccagttgttgttatgatttctggcaagccagggataggcaagacccacctagccag +ggaggtggcgagaaaggtggcatccactctcacgggagatcaaagagtcggactcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagcaaccccatcca +tgatgctctgcgcatacaggagttggccgacacgtgtcccctcaccctaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataatcacaacaaaccttgccaatccagctcccctcgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcaccagaagtggaaaaagcaa +aacgagacttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttttcgcatatcaagctac +aacttgcgcctcagggcggttttgacaagaacggcaataccccacatggtaaaggagtgatgaagaccctca +ctactggttctctgattgcccgcgcgtcaggtttactacatgagaggatggatgaatttgaactccagggcc +ccacaatcaccactttcaatttcgaccgaaacagaatcaccgcctttagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagggttggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +caatcaagaatgtgtccatcaagaggtgccagattatctataatggctccacgttcgaccttgagtctgatg +gtaagggcaaagttttagtggaaaaggtcaaaagcacctctgttcagaccaacaacgagctggccggagccc +tgcatcacctcaaaagtgctcgaattaggtattatgtcaagtgtgtgcaagaagcagtctactccatcctgc +aaattgccggcgctgcgttcgttaccacacgcattgcacgccgcatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------accagaggctaaagaagaggctcccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacacagcattctctagcaagggcttgagtgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttttgcgaggaagaagaaatcaaaatccgccaga +gaatctttcgccccactagaaaacaaaggaaggaagaaagggccacgctaggactagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaattggactttgaggcccccccaagcatatggtctagaattgtgagctttggttccggttggg +gcttctgggtgtcac-caagtctgttcataacatcaactcatgtaatccctgcgggcatagcagaggcattt +ggagtccccatcaaacaagtccaagttcacaaatcaggtgagttttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgattctggaagagggcgcgccagagggcactgtggcaaccgtgctaatcaaa +cgccccaccggggaactcatgccactcgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaagggtatggatttgggaacaactcct +ggtgattgtggttgcccgtacatctacaaaaggggcaatgattatatagtcattggagtgcacacagcagca +gcccgtggtggaaatactgtcatttgcgccacgcaggggagtgagggtgaggcgactctcgagggtggagac +gacaaaggaacatactgtggggcacccattctgggccctggaggagcaccaaaattgagtaccaaaaccaaa +ttctggaggtcatcaaacacgcccctcccaccagggacatatgagcccgcttaccttggtggtcgtgacccg +cgtgtaaagggtgggccctctttgcagcaagtcatgagagatcagttgaagcccttcactgagcccaggggt +agacctccaagacctagtgtactggaggcagctaaacaaaccatcatcaacgtcctcgagcaaaccttggat +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagacctttattggtaagttggcagaccaagcatcaaaagca +aatttgatgtatgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtcaag +actgacaaaatttatagtaagatcaagaagagactgctttggggctctgacttgtccaccatggtccgatgt +gctagggcctttggtggactcatggatgaaatgaaggcacactgcatatcactcccagttcgagttggtatg +aacatgaatgaggatggcccaatagtatttgagaagcattccagatataagtaccattatgatgctgattac +t-cccgctgggactcaacacaacaaagggctgttctagcagcggccttggagataatgg-tcagattctctg +cagaaccacaact-ggcgcaaacagtcgctgaagatctgctggcccctagtgtggtagatgtaggggacttc +aaaatctcaataaatgaggggctcccttctggtgtaccatgcacttcccagtggaactccatcacacattgg +ctgctgactctctgtgctttgtctgaagtcaccaacctgtcccctgacatcgtgcaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agagaatatggtctgaaaccaacccgcccagataaaactgagggacccctgatcatcagcgaggatctggac +ggactcactttcctccggaggacagtttctcgtgacccagctggctggtttggaaagctagatcaaagttca +atactaagacagatgtattggaccagaggaccaaaccatgaagatcccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggcgaggcttccctccatggaccctctttctatagtaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcactagaaccagttgcaggagcttcaattgctgcccctttaactggtcaaaacaatgtaataga +cccctggattagattaaattttgtacaagcccccaatggtgagttcacggtttccccccgaaactcgcctgg +tgaaattttgctaaatttggagttagggcctgaattgaatccatacttagcccatttagcaaggatgtataa +tggttatgcaggtggggtcgaggtgcaggtactgctggctggaaatgcgtttacagc---aggcaaacttgt +atttgcagcaatcccccctcattttccagtagataatttgagccctggccagattactatgttcccccacgt +gatcattgatgttagaacacttgaacctgtcttgttaccattacctgatgttagaaataatttctttcatta +taatcaacagagtgat---cagcgcatgagacttattgctatgctttatacccctcttagatctaatggttc +aggtgatgatgtctttactgtgtcatgcagggtcctaaccaggccatcccccgattttgattttaattattt +ggttcctccaacagttgaatccaaaactaaacccttctcagtcccagtgctgacccttaatgagctgaccaa +ctctcgt---tttcctgttccgattgatgccatgtacaccagccctaatgattcaattgtggtccaacccca +aaatggaagggcaaccatagacggtgagttgcttggcaccactcaactcatacccagtggtatctgttcatt +taggg-----------------------------------------gaaaaatcacaacac----------- +-----------atttgtc------------------------------------------------ag---- +-------atgata----------------------------------ggcac-------------------- +-------ttgtggaacatccaagtctccaatttgaatggtactccgtttgacccaacagacgacgtgcccgc +accattgggtatgccagacttttctgggcaaatatttggggtggttagtcaaa---gggacacag------- +----------------gcaccaaccccgcaaac--------aga-----------gctcatgatgctgttct +tgcaacctacagcgccaaatacacacctaaactcggctcagtccaaattggaa---------catgggacac +cgaggattt---gcttgaaagacagcctgtca---------------------------aattcacgcccgt +tggtctcaatgaaatt---------gggcaagacaagcat---------ttcgaccaatgggtgttgccaaa +ttattctggtgcc-ctggga------ctcaacatgcacctggctcctgctgtgtccccactctttcccggag +agagattattgttctttaggtcatatatacct------ctaaaaggtggcca------tgggg--------- +--acccatttattgattgtcttgtgccacaagagtggattcaacacttttaccaagaatcagccccagcaca +atcctcggtggctctactgaggtatgtgaatccagacacaggtcgcactctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagcacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgactcttgggttaaccaattctactcattagcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgctggtgacattgtcactaacggcatt +ggttcgcttgtgaacgctgg---agccaatgctataaaccaaaaagttgattttgaaaataacaaacagcta +caacagg---------------------------------cctcttttaaccatgacagagagatgctgcaa +gcccaaattcaagccaccaaacagctacaggctgacatgatttcaatcagacaaggggttttgaccgcgggc +ggcttctcccctactgatgctgcaaggggtgcagtcaacgcaccgatgacccaagtgctggactggaatgga +actagacattgggctcctggagcctcaaggactaccagcttctctggtgggttcaccaattct--------- +ac---------------------ccgtgccagaacagttgagccacctaagagttccccccccgttcaaaat +actttga----------------tctctgattccagac--------------ctag---------------- +------------------------------ctctactgtctcatcttcctct------------------ac +ccgatcga-----------ctgtg------------gtcactagctcttctactgccc-------------- +----catc---taagt-----cttctgcaac------tagaaattcacc-----------cc--------gc +-------------------agtgttactcaatctgtttctt---------ctg------------------t +ttcttc---------------------------------------tcgcactggtgattgggtgcaaaatca +aaatagaatgctggagccatacctga---gggggtcgtcgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---agta------------------------------gtggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------ttaatacccgcagacagccgctcttcgctc +acctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagaatt-------- +---a-g-att-ttct-----tt------------ttctttc----------tt-------------tccttt +t-gttgaaaatc-ttat---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305567.1/1-7492 |Norovirus GII isolate 912SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------------gct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ccaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +agaggaatctaacacggccttcagtgtccctccactcagtcagagggagaatagagatgctaaagagccact +gacaggaacaattctagaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctagggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtatctcatctccccagacgctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaacgattcgtggct +gag---taggaggatgatccagagaacgtctggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaatatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgaactacaaggacctgaggaccttgcggtgga +gctcgtccctgtagtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatccaccttgagggcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaactta +catgaggacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtattgatgatatcaggtaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtataaaggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgacttctcacacataaaactaa +cattggctccacagggtggctttgacaagaacgggaacacccctcacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcaggactactccatgagagactagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcgacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaataatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctctgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaatcagatactatgtcatgtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgttaccacgcgcatcgtcaagcgcatga------acatacaagatctatggt +ccaagccacaagtggaaaacacagagga--------gactgccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtagccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgatagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggttggg +gattctgggtctccc-ccagcctgttcataacgtcaacccatgtcataccccagggcgcaagggagttcttt +ggagtccctatcaaacagattcaggtgcacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgtggctgtccctacatttacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggagtgagggagaggctacactcgaaggtggtgac +aataaggggacatactgtggtgcaccaattctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggatccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcagactggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttacggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-cccggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacaccatacaggctaattccctcttc +tctttctatggtgatgatgagattgttagcacagacataaagttggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctga---tgggtctacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcctttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaactgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcttttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaaccccagc +ccctctgggaactccagatttcgtgggaaggatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggccacaaagccacagt +gagcactggaagtgtccactttatcccaaagctgggcagtgtccaattctcca---------ctgatacaag +caatgactt---tgaaactggtcaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtggcaccacccatcagaatgaaccccaacaatgggtgcttccaga +ttattcaggcaga-gatagc------cataatgtacacctagcccctgccgtggccccctcttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatgaatctggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaatta +caacaagcttccttccaatttagcagcagcctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +acaggaa----------------gaactaatctcagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------gg +cacacctt-----------ctaat------------acttctactgctgctt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305568.1/1-7524 |Norovirus GII isolate 925SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ccaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaggaatctaacacggccttcagtgtccctccactcagtcatagggagaatagagatgctaaagagccact +gacaggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctagggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtatctcatctctccagacgctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaacgattcgtggct +gag---taggagaatgatccagagaacgactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagacataatagggaagctgaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccattgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtattgatgatatcaggtagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtataaaggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgccttcagttctgacttctcacacataaaactaa +cattggctccacagggtggctttgacaagaacgggaacacccctcacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcaggactactccatgaaagactagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgccttcaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaataatatctcaatcaagaagtgccagatagtgtataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgagagttgacagagttcagagcgcctctgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaatcagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagatctatggt +ccaagccacaagtggaaaacacagagga--------gactgccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcatttcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagaaaggaatggcaggtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtagccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggttggg +gattctgggtctccc-ccagcctgttcataacgtcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccctatcaaacagattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaaaatccaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggagtgagggagaggctacactcgaaggtggtgac +aataaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggatccc +agagtcaagggcggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtctttcacaggcagactggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttacggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaacgaagatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-cccggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacactatacaggctaattccctcttc +tctttctatggtgatgacgagattgttagcacagacataaagttggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaagattagagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgagatactgtggagcgcgcctttgggccctgatttgaatccctacctttcccatttggctagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactatcaaattgatagcgatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaacctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +cccactgggaactccagatttcgtgggaaggatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggccacaaagctacagt +gagcactggaagtgtccactttaccccaaagctgggcagtatccaattctcca---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtggtaccacccatcaaaatgaaccccagcaatgggtgcttccaga +ttattcaggcaga-gatagc------cataatgtacacctagcccctgccgtggccccctcttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatgaatctggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaatta +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +acaggaa----------------gaactaatctcagggctac------------------------------ +------------------------------tgtccccgctcgaggctcctct------------------gg +tacacctt-----------ctaat------------acttctactgctgctt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcaccttttatga---ggggggcccacaacgtatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttcc------------tt----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305569.1/1-7460 |Norovirus GII isolate B17-c1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-----------------ctaacaccaccccttctaataaagaagaggc------tggtgcattttccaacat +taaagttggatttaagaaaa----tgctgggtgccgtgcccaagggcacc-------------aaaacgccc +agcggtga----------------ccaacactgccccacagttaagatcggacctaaaacattaatggtccc +acc-----------------------------tgaacctccaaatgg------agaagat------gtcgtg +cagtttgatg----------cgaagtcagaaactgtacgtgggctaccagacttgacaacggt---acaaaa +tgagcatgaaaataccccatacacagtccccccactgagtgaaagggaacatagaccagccactgagcccct +ccctggcacaatactggagatgtgggacggtgagttctaccactactccgtctatgtcagcagtggcaaagc +cctgggggtccacaaaccccctgcagctataagcctcgcgacaattgagctcacccccatatccctttactg +gcggcccgtttacactccca---actacttggtttgcccagacacattaaagggccttgctggtgagaagtt +cccctacactgccttcagcaacaactgttacaacttctgttgttgggtgctggagctcaatgacacgtggct +ttg---tagaagatgcatctccagaaccaccggcttctttaaaccgtaccagtcttggaataggaagcctct +tccaaccgtcgatgatgggaaaatcaaaaaggtggccaacgcaattctctgtgcgcttggctcgctgttttc +aaaaccaatcaaagatctattaggcaaactcaaaccactgaatctgctgcacctgctcgcgtcatgtgactg +gactttcgcgggtatagtggaaacggtcatcttaatggcggaactcttc---aacgtcttttggaccccgcc +ggatgtctccaatttcatagcctccctgataggtgacttcgagttgcaagggcctgaggacttggccgtgga +gctcgtccctgtggtcatgggtggcataggaatggttctcggtttcactgctgagaagataggccgcatgtt +gtcatctgctgcgtcaaccttgcgggcatgtaaagatctggggaactatgccctcgatatactcaagttagt +catgaagtggttctttccaaagaaagaagagaaagccgagatggagaccttaagagcgattgaggacgccgt +cttggacatggaggctataggaaacaaccacctcacgactctcctcaaggacaaggatagcctcacggcttt +catgaagaccctagacctggaagaggagaaagcaaggaagctgtcaaccaaatcatcttcgccggatattgt +cggcaccattaatgccatactggccagaatagctgccgccagatccctcctacataaagccaaagaggagat +gtttagcaggatcagaccagtggttgttatgatctcaggcagacccggcattggcaaaacccatatggcaag +acacctggctaagagcatcgccaataccatgagtggtgaccagagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggggagagggtggttttatgggatgactacggcatggggagccctgtcaa +agatgctttaacactacaagaattggccgacacctgcccggtcaccttaaattgtgacaggattgagaacaa +gggaaagatgtttgacagtgacgtcattataatcacaaccaatttagttaaccctgcacccctcgactatgt +gaacttcgaggcatg-ctccagaagagttgactttctagtctatgcagagtcaccagaaatcgaaaaggtta +aaagagatttccctggtcaacctgatatgtggaaagaccacttcaagccggacttttctcatataaagctga +ctttagccccccagggcgggtttgataagaatggcaacactccgcatggtaagggtaccatgcgatccttaa +cccaggggtccctaactgcaagagttgctgggcttgtccatgagaggagagatgaattccagctccaaggga +acgacctccaaacatataattttgacaccaacagggtctccgcatttaggaagctggctgcagacaacaagt +atggaatcatggagacaatgagagtgggtgcagcgctcaagaatgttaagactttggaagacctaaaagtcg +ctctgagagacgtgaagttcaatgagtgtgaaattatttacaggaactccaagtatcgagtctcttccaacg +gcaaaggctcagtttctgttgataaggtcgaggaccacgcatcccaaactgcaaatgaggtgagctcagcac +tcctaaggctcaggcaagcaagggccagatactatgtcagctgcttccaagaccttgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaagagattctgct +gggaaaggtgggttaaaccaactgagac-------------ccaggagacgagtgaacccga-----gaagg +agaccgctcagggca---ggtgggagattgaacccaaggacgcagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagctttctccagtaaaggcctaagtgatgaagagtatgacgaattca +aaagaatcagagaagaaagaaatggaaagtactccattgaggagtacctgcaagatcgggaccgctac---t +acgaggaagtggcagttgcccgagcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccgacaaagaaacaaaggaaggaggaaagaggtgtgctcggcttggtcaccggctcggaca +tcagaaagaggaggccagatgacttccaaccaaaaggcaacctatgggcggatgacactagaagtgtggact +ataatgagagactcgactttgaggcccctccaagtgtttggtcgaggatagtcccattgggtactggttggg +gtttctgggtctcat-ccaacctcttgatcacgacaacacacgtccttcctaagggactcaaagaacttttt +ggagttgaagtcaaacaaatccaaattcacaaatctggagagttctgcaggtttagattcccaagaccaatc +aggccagatgtcacagggcttgtgttggaagaaggtgctccagagggcactgtttgctccatacttgtaaag +agacctacaggtgaaatgatccccttggcagtgagaatgggcactcatgcgtccatgaaaattcagggcaga +accgtcggtggccagatgggaatgcttcttacaggagcgaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggctgtccctacatttacaagcgcggtaatgacatagttgttgcaggagttcacaccgcggca +gcccgggggggcaacactgtcatctgtgccacccaagggcaagatggggaggcagtccttgagggaaacgag +aatcttggcacatactgtggtgccccaattctcggtccaggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgccttgccacctggcacatatgaacctgcttacctaggaggcaaggaccct +agagtagaaaaagggccctccctgcagcaagtcatgagagaccagttaaaaccctttacagagcctaggggt +aaaccaccgagacctgcagtcctagaagaggccaaaaagacagtgatgaatgttttggaacaaaccattgac +cctgccaagccatggacttactcacaagcatgtgcctcattggataaaaccacttccagtggtagcccccac +cacgtcaggaaaaatgaccactggaatggagaatccttcacaggtcccctcgcagatcaagcatctaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtatacggccgcactcaaggatgaacttgttaag +actgataaaatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggcctcatggacagcatgaaggcgagttgcatagctcttccatgcagggtgggaatg +aacatgaatgaggacggtcccatcatctttgacaagcactccaaatatagataccactatgatgctgactac +t-ctaggtgggattcaacccaacaaaggagcatcctttctgctgctatggaagtgatgg-tgcgattctccg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcgcctagtcaactagatgttggcgatttt +gtcatctcagttcaggaaggtctaccatcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcaggcctttcaccagatgttgtccaagcccactcctgtttt +tctttctatggtgatgatgagattgtcagcactgacatcaacctcgaccctgcaaaattgacacagaaactc +agggagtacggtctggttcctacccgacctgacaaaactgaaggtccccttgtcataactgaagacctagct +ggccttacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggatcaggactca +atcctcaggcaattgtattggacaagagggcccaaccatgagaacccatacgaaagtatggtcccccattct +cagcgagctacacagctcatggccctcctaggtgaagcctcattgcatggaccccaattttacaagaaggtt +agtaagatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtcgtcggacaacagaatataattga +tccctggattaggaataattttgtacaagcccctgctggtgaatttacagtctcccctagaaattctcctgg +agaacttttgcttgatttagagctgggccctgaactaaatccctatcttgcacatttggctagaatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactagctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccacctagtttcccctacgaaaatttgtcacccgctcaactgaccatgtgcccccacgt +gatagtggatgtgagacaattggaaccggtgctcctgccaatgcctgacataaggaatgttttctatcacta +caaccagaacaacagt---cccaaacttaggcttgtagctatgctgtacactcctctgagagctaacaactc +aggtgatgacgtgttcacggtgtcatgccgcgttttaacacgtccctctccagattttcaattcacctttct +ggtcccacccacagttgagtctaaaaccaaaaatttcacccttcctgttctcagagtctccgagatgacaaa +ctcaagg---tttccagtcgttctggaccaaatgtacacgagcaggaatgaaaacatcattgtccaacccca +aaatggcaggtgcacgactgacggtgagctccttggcactaccatcttgcagtctgtgtctatttgcaactt +taaag-----------------------------------------gaaccatgcaggcagaat-------- +---------tgagtgatcaacc-----------------------------------acgatac-------- +--------ca--------------------------------------------g----------------- +----------taccaattgcaactcaccaacttggatggctcacctatagacccaacagatgacgtgcctgc +ccctcttggcacaccagattttcaggctatgttgtatggcgttgcgagtcaac---gttcctccag------ +---------------aga-----caacgccact--------agg-----------gcacatgatgcacaaat +tgacactgcgggtgacacattcgccccaaagattggccaggttcgttt---ta---------aatcaagttc +caatgattt---tgacctacatgaccccacaa---------------------------aattcacgccca- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtctctaccaaa +ttacggtggacat-cttgcc------ctgaataatcatttggcccccgctgtaacaccactcttccctggcg +agcagattttatacttcaggtcatacattccaa------gcgctggaggtca------cacag--------- +--acggtgctatggactgcttgctaccccaagaatggattgaacatttctaccaagaggcagccccttccca +atctgacatcgcactagtgaggttcataaaccctgacacaggaagagtgctctttgaggccaaattgcacaa +acaaggtttcctcacaattgcagcatctggagaccaccccattgtgatgcccactaatggttatttcaggtt +tgaagcttgggttaaccccttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gatcc---------aataatggcaggagctttccttgcaggcttggcaggtgacgttgtaacttccagtttg +ggctcacttgcgggcgctgg---agccaacgccatcaaccaaaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatctttcagacatgataaggacatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggctatgattgacatcaaacgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagtcagagcacctatgacacagatcctggattggaatggt +tccaggtattgggctcccaactccatgaggacaacaggttattcaggtacatttgtttcccagggtgtca-a +aa-----------atattccccacctgtc-------------ta---------------------------g +tcaagctc--------------caagcgcttctagacc---------------------------------- +-------------------------------------ctccagagctttaccatctat-----------ttc +tagttctt-----------ctagtgtgtatagttctccctctactgctccttcgc----------------- +---------------------aatcaacaca---attaacaacgctgtctg-------cggg--------ga +ctgggtc----g---tctag-------------------gcctaacaccgtgt---------ccacaggaac +atccac-------------------act--------------gtctagaacaagtgattgggttagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcacttcaaactgcttacgtcacaccaccatcgagcaa +ggcctca---tcac------------------------------aaggga---cagtctcgactgtgcccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg-------------------ttttcttc------ct-ttcccctt---cta------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305570.1/1-7441 |Norovirus GII isolate B17-c2 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +----------------------------------------------------ct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcacggcctaaacagccg-cccccgagggaagtaccacag +agg---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgaaccagtggtt +tcttatagcg----------tcaa---agatggcgtctccggtttgcctgagctttccactgtcaggcaacc +ggatgaaaccagcacggcgttcagtgttcccccactcaaccagagggagaatagagatgccaaggaaccact +aactgggactattatagaaatgtgggatggggagatctaccattatggcctgtatgtggaacgaggccttgt +gcttggcgtgcacaaaccaccagctgccatcagcctcgctaaggtcgaactaacaccactttctctattttg +gagacctgtatacactcccc---agtacctcatctccccagacactcttaggagactgcacggggaatcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcttagacctaaatgattcatggct +gag---taggagaatgatacagagaacaacaggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattctaaattgaagaaggtagccaacatatttctgtgtgccctatcttcgctattcac +cagacctattaaagacataatagggaagctgagacctcttaacatccttaacatcttagcctcatgtgactg +gacttttgcaggcatagtggaatccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttactaggtgatttcgagctgcaggggcctgaggaccttgcagtgga +actcgttccaatagtgatggggggaattggtttggtgctagggttcaccaaagagaagattgggaagatgtt +gtcgtctgctgcatccaccttaagagcttgtaaagatcttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaagtgagctggctatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgaaaacaaccacatgactaccctgcttaaggacaaagatagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgccctcctggcgaggattgctgctgcccgctccctggtgcaccgggcaaaggaagaact +ttccagtaggccaagacccgttgttgtgatgatatcaggcaaaccagggatagggaagacccaccttgccag +ggaactggccaagaagatcgcaacctccctcacaggggaccagcgggtaggtctcatcccacgcaatggcgt +tgaccactgggacgcatacaagggagagagggtcgtcctctgggatgactatggaatgagtaatcccgtcca +tgatgccctcaggttacaagaactcgctgatacttgccccctcacactaaattgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgctataattattaccaccaatttggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgactttctcgtgtatgccgatgcccctggagtcgaaaaggcga +aacgtgatttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccacagggtggctttgacaagaacggcaacaccccgcatgggaagggcgtcatgaagaccctca +ctaccggctccctcatcgcccgagcatcaggacttctccacgagagattagacgaatatgagctgcagggtc +caactctcacaaccttcaactttgaccgcaacaaagtacttgctttcagacagcttgctgctgaaaataagt +acggactgatggacacgatgagagttggagggcagctcaagggtgtcaggaccatgccagaactcaaacaag +cactcaagaacatctcaatcaagaggtgccagatagtgtatggtggcagcacctatacactcgaatctgatg +gcaagggtaatgtgaaagttgacagagttcagagtaccactgtgcagaccaacaacgaactggctggcgctc +tacaccacctcagatgtgccagaattaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcattgtcaaacgcatga------acatacaggacctctggt +ctaagccacaggtggaagacacagaaga--------gaccgccagcaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtttcatccgacgacattaagactgagggcaagaaaggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagcaaaggtctcagtgatgaagagtacgaagagtaca +agagaatcagagaagaaagaaacggtaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagattcggcaga +gaatttttaggccaacaaggaaacaacgcaaagaggagagggcctctcttggtttggtcacaggctctgaaa +tcaggaagaggaacccagatgacttcaaacccaaaggaaaactgtgggctgatgacgacaggagtgttgatt +acaatgagaggctcaactttgaagctccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gattttgggtttctc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcacaggagttcttt +ggagtccccatcaaacagattcagatacacaagtcaggcgaattctgtcgcttgagatttccaaaaccaatc +agaactgatgtgacgggcatgatcttggaagaaggggcccccgaagggaccgtggctacactactcatcaag +aggccaaccggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatccaaggacgc +actgttggaggccagatgggcatgctcctaacagggtccaacgctaagagcatggacctaggcactacacca +ggtgactgtggctgtccctacatttacaaaagggaaaatgactacgtggtcatcggagttcacacggccgct +gctcgtggaggaaacactgtcatatgtgccacccaggggaatgaaggagaagccacgctcgaaggtggtgac +aacaaagggacctactgtggtgcaccaatcttaggtccagggagtgccccaaagctcagcaccaagactaag +ttttggagatcatctacaacaccactccctcctggcacctacgaaccagcttaccttggtggcaaggatccc +agagttaagggtggtccctcgttacaacaagtcatgagggaccagctaaaaccattcacagaacccaggggc +aaaccaccaaaaccaagtgtgttggaggctgccaagaaaaccatcataaatgtccttgaacaaacaattgac +ccacctcaaaagtggtcattcgcgcaagcttgcgcgtcccttgacaagaccacctccagtggtcatccgcac +cacatacggaaaaatgattgctggaacggtgaatccttcacaggcaaactggcagaccaggcttccaaggcc +aacctgatgttcgaggaagggaagagcatgaccccggtctacacaggtgcgctcaaggatgagctggtcaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacctggcaaccatgatccggtgc +gctcgggcatttggaggtctaatggatgaactcaaggctcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggacggtcctatcatctttgagagacactccagatacagataccactatgatgctgattac +t-ctcggtgggactcaacacaacagagagcagtgctagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacacct-ggcccagatagttgcagaagatctcctctctcccagtgtgatggatgtaggtgacttt +aaaatatcaattaatgagggcctcccctctggggtgccctgcacctcacagtggaactccatcgcccattgg +ctcctcaccctctgtgcactctctgaagttacaaacctgtcccccgacatcatccaggctaattcccttttc +tctttttatggtgatgatgaaattgtgagtacagatataaagttggacccagaaaaattgacagcaaaactc +aaagaatacgggttgaaaccaacccgccctgacaaaactgagggacccctgattatttctgaagacctgaat +ggtttgaccttcctgcggaggactgtaacccgtgacccagctggttggtttggaaaattagaacagagctca +atacttaggcagatgtactggactaggggccccaatcatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattaatgtctttgctgggtgaggcggcactccacggcccagcattctacagtaaaatc +agtaagctagttattacagagctgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagtacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggcgctgccttggcagctccagtcactggccaaacaaacattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcactgtttccccacgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaacccttatctggcacacttggcaaggatgtataa +cgggtatgccggtggaatggaggtgcaggtcatgctagctggaaatgcgtttacagc---tggaaagttggt +cttcgccgcagtcccgcctcatttcccggttgaaaaccttagcccgcagcaaatcactatgttcccccatgt +aattatagatgttagaactttggaacctgtcctattaccacttcctgatgtcaggaataatttctttcatta +taatcaaaaggatgac---cccaagatgagaattgtggctatgctttacactccccttagatcgaatggttc +tggtgatgatgtattcacagtttcttgcagggtgttaactaggccctcccctgactttgatttcacatattt +ggtgccaccaacagtggaatctaaaacaaaaccatttacacttccaatccttacactcggggagctttccaa +ttccaga---ttcccggtatctatagaccaaatgttcactagccctaatgaagtcatatctgtgcagtgtca +gaatggcaggtgcacactggacggggagctccaagggacaacacagctccaagtcagtggtatttgtgcatt +caaag-----------------------------------------gagaagtgaccgcccatttac----- +----acgataat-------------------------------------------------------g---- +-------accacc----------------------------------tctacaat----------------- +----------------gtcaccatcacaaatttgaatgggtccccttttgacccctctgaggacatccccgc +tcccctgggtgtgcccgatttccaagggagggtcttcggcatcattagccaaa---gagataatcaca---a +tgtcagt-----ggacataaccagcctgcaaac--------agg-----------gggcatgacgctgtggt +cccaacctatacagctcaatacaccccaaaattgggtcaaattcaaattggca---------cgtggcagac +tgatgacct---aaaagttaaccaacctgcca---------------------------agttcaccccag- +--------ttggtc---------tcaatgatatgg---------agcattttaatcaatgggtggttcccag +atacgctggtgca-ctaaat------ttaaacacaaatcttgccccttccgttgcaccagtattcccaggag +aacggttgctcttcttcagatcataccttcctc------tcaaaggtggtta------cggca--------- +--acccagccattgactgcctggtgccacaggaatggatacagcacttctaccaagaagctgccccctcaat +gagtgaggttgcccttgttaggtacatcaacccggacactggtcgggcgctgtttgaggccaagctccacag +ggctggttttatgacagtctcgagtaacaccagtgctccggtggtcgtgcctgccaatggatactttagatt +tgactcctgggtgaaccaattttactctcttgcccccatgggaactggcaatgggcgtaga---------ag +gattc---------aataatggctggtgcttttatggctggtttagcaggagacgtgctcagcaatgggctc +ggctcattaattaatgcagg---tgctaatgcaataaatcagagagcagagtttgattttaatcagagg--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagatacaggcaactaagcagctgcaggcagacatgatggccataaagcagggggtgttgaccgctggc +ggcttctcccctgctgatgcagccaggggtgctgtaaacgcacccatgacacaagcgctagattggaatggt +acaaggtactgggcaccaggctccatgagaacaacttcctactccggaaggttcacatcaa----------- +-------------------------------ccgctcc---------------------------------a +gcaagac----------------aggctgactt--------------------------------------- +------------------------------ccaacacacccagagtcggccttcgag------------tgg +t---tctt-----------ccgtg------------tcctcctactctacacaatcctcaagaccaacctta +accacaattgcagggt-----cttcacacag------ctcaacctc------------------------at +ccaattc--------gacccgtagcacaaatctcccc---tcgactatttctag---------------agc +cacttc---------------------------------------taggactagtgaatgggttagagacca +aaataggaatttggaaccctacatgc---atggtgctttacaaacggcctttgttacaccaccttctagcag +ggcatcc------g------------------------------atggga---cggtctcaaccgttcccaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305571.1/1-7528 |Norovirus GII isolate S7d nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcactaacaccaccccttctaacaaagaggaggc------tggtgcattctccaacat +taaagttggaattaagaaaa----tgctgggtgccgtgcccaaaaacccc-------------aaggcaccc +agcggtga----------------ccagcactgtcccacggttaagattggacctaaaactttagtgatccc +acc-----------------------------agagcccccaaacgg------tgaagat------gttgtg +cagtttgacg----------cgaagtcggaaactgtgcgtgggattcccgatctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacggtccctccactgagtgaaagggaacatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgagttctaccactactccatctatgtcagcggtggcaaagc +cctgggggtccacaaacccccagcagctataagcctcgcgacaatagagctcacccccatatctctctactg +gcggcctgtctacaccccaa---attatttggtctgtccagacacattgaagggccttgctggtgaaaagtt +tccctacacggccttcagtaataactgctacaacttctgttgctgggtgcttgagctcaatgacacatggct +ttg---cagaagaagcatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaacgcaatcctctgtgcgcttggctcactgttttc +aaaaccaatcaaagaccttttgggaaaactcaaaccactaaacctactacacctactcgcgtcctgtgactg +gacattcgcaggcatagtggagacggtcatcttaatggcggaactcttc---aatgtcttttggactccgcc +agatgtctccaactttatagcctctctgataggtgattttgagctacaagggcctgaggacttggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggtcctcggtttcactgctgagaagatagggcgcatgtt +gtcatctgccgcatcaactctgcgggcgtgcaaagatctggggaactacgccctcgacatactaaaactagt +cacgaagtggttcttcccaaagaaagaagagaaggctgagatggagactttgagggcgattgaggacgccgt +attggacatggaggcgatagggaacaaccacctcacgacgctcctcaaggacaaggacagtctcactgcatt +tatgaagactctagacctggaggaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggtaccatcaatgccatattggccagaatagcagctgccagatcccttctacacaaggccaaggaagagat +gtttagcaggattagaccagtggttgtcatgatctcaggcaggcctggtattggcaaaacccatatggcgag +gcatctggctaagagtatagccaacaccatgagtggagaccagagagttgggctcgtccctcgcaacggggt +tgaccactgggacgcctacagaggagagagagtggtcctgtgggacgactatggtatgggaaaccctgtcaa +agatgccttaacattgcaagaactggccgacacctgtccagtcactctaaattgtgacaggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattacgt +aaattttgaggcttg-ctccagaagaattgacttccttgtttatgcagaatccccagaaatagaaaaggtca +aaagagacttccctggccaacctgatatgtggaaagaccacttcaagccggacttctcacacataaaactga +ccttagccccccagggcgggtttgacaagaatggtaacaccccacatggtaagggtaccatgcggtccctaa +cccaagggtccctgactgcaagagtcgcaggtctcgttcatgagaggagagatgaattccagctacaagggg +atgaccttcaaacatacaactttgacaccaacagggtctctgcgttcagaaaactggccgcggataacaagt +atggaatcatggagacaatgagagtgggagcggcactcaagaacgtcaaaactttggaagaccttaaagttg +ccttgaaagatgtgaaattcaatgaatgtgagatcatttacaggaactccaagtaccgagtctcatccaatg +gcaagggcgctgtctctgttgacaaaatcgaagacctcacatctcagactgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcaagggccagatactacgtcagctgcttccaggaccttgtctacaccctcatac +aggttgctggggcttcattcgttgtca---------------atagga------tctcgaagaggttctgct +gggaaaggtgggttaagccgaccgagac-------------tcaggaaacgaatgagcccga-----gaagg +aaactgcccaaggta---gatgggagattgaacccaaggatgcagaaccagaaggtaaaaagggcaaaaaca +agaaaggaagaggcaagaaacacacagccttctccagtaagggcttgagtgatgaagagtatgatgaattca +agaggatcagggaagaaagaaacgggaagtattccattgaggaatatctgcaggaccgggatcgttac---t +acgaagaagtagcggtcgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccaacaaggaaacagaggaaagaagagaggggggtgcttggcctggttactggctcggaca +tcagaaagaggagaccagatgacttccagccaaagggtaacttgtgggcagatgacaccagaagtgtggact +ataacgaaaggcttgactttgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gtttttgggtctcat-ccaacctccttatcacaacaacacatgtcctacctaagggcatcaaggaactcttt +ggagttgatgtcaaacaaatccaaattcataaatctggagagttttgcaggttcagattcccgagaccaatc +aggccagacgtctcagggctcgtgttggaagagggcgcaccagagggtaccgtctgctctgtactcgtgaag +agatcaacaggtgagatgatccctctggcagtaaggatgggtacacatgcatccatgaaaatccagggcagg +actgtcggtggccaaatggggatgcttctcacaggagcgaacgcaaagaacatggatcttggcaccggtcca +ggtgactgcggttgtccttacatctacaaacgcggtaatgacataattgtggcaggtgtccacaccgcagca +gcccgagggggcaacactgtcatctgcgccacccaagggcaggatggggaggcagtccttgaagggaatgag +aatcttggcacgtactgcggtgccccaattttaggtcctggcaaagcgcccaagctcagcacgaaaaccaaa +ttttggcgctcgtcgccggatgccctgccacctggcacatatgagcctgcttacctgggaggcaaggacccc +agagtggagaaaggaccctccctacagcaagtcatgagagaccagttaaaacccttcacggagcccagaggc +aaaccaccaaggcccacagtcctagaagaggctaaaaagacagtgatgaatgtcctagaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgtgcctccctggacaagaccacttccagtggtagccctcac +cacgtcaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagatcaagcgtccaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcactcaaagatgagctcgtcaag +actgataaaatctataagaagataaagaagaggctcctttgggggtcggatctgggcacaatggtcagatgt +gccagagcttttggtggcctcatggacagcatgaaagcaagctgcataaccctcccgtgcagggtaggtatg +aacatgaatgaggacggacccatcatctttgacaagcactcaaaatacaggtatcactatgatgctgactac +t-ctaggtgggattcaactcaacaaaggagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaact-ggcacaagtggttgcagaagaccttctagcacccagccaactagacgttggtgacttt +gtcatctcagtccaggaaggtttaccatcaggagtcccatgcacatcacaatggaactcgatagcgcattgg +attttaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgatattaaccttgacccttcaaaactgacacagaaactt +agggagtatggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctacgtaggtcgattgcacgggacccagctgggtggtttggaaaactggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgagagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcatgggccccagttttacaagaaggtc +agcaagatggtcatcagtgaaattaagagtggtggtctggagttttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtctcaccaaggaattcgcctgg +tgagatgcttttaaatcttgagttgggcccagaacttaatccctatttaagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccctgtagaaaacatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgatataaggaacaggttcttccatta +caaccaagagaacacc---ccccggatgaggcttatagccatgctttatacacctctgagggc---caattc +tggtgaggacgtgttcactgtgtcctgcagggttttgactcgtcccgctccagattttgagttcacattttt +agtgccaccaactgttgaatcaaagacaaaacctttcactttgcctattctgacccttggtgagttgtctaa +ttctcgc---tttccggctgctatagatatgctttatactgatcctaatgaatcaatagttgtacaacccca +aaatggtaggtgcactcttgatggcaccttgcaaggcacaacacaattggtccccacacaaatttgtgcctt +tagag-----------------------------------------gcactctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacaatacgacccaacggatgatatacctgc +agtcctgggggctattgacttcaaaggtacagtttttggagtggccagtcaaa---gggatgtctctgggca +-----ac---aagaacagggccactatgccacc--------cga-----------gcccatgaagcacacat +tgatacaactgacccaaagtatgcacccaaattaggcacaatccttat---ta---------aatctgaatc +taatgattt---tactacaaatcagcccatta---------------------------ggttcactccgg- +--------tgggcatgggtgaca---------------------acaattggagacagtgggagttacctga +ttattctggtaga-ttaact------ttgaacatgaacctcgctcccgctgtttctccgtctttccctggtg +aacgaattcttttcttcaggtctatagtaccat------cagccggaggctt------cggat--------- +--ccggttatatagactgtctcatacctcaggaatgggtacagcacttctaccaggaagcagcgccttcgca +atccgctgttgccctggttagatatgtcaaccccgacactgggcgtaacatctttgaggccaagttacatag +agaagggttcctcaccgtggctaactctgggaacaatcctattgtggtcccccccaatggttattttagatt +tgaagcttgggttaatcagttttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcaggattagcaggtgatgtcgtgtcgaacggcatc +ggatcccttatcaatgcagg---tgctaatgcagttaatcaaaaggtggagtatgactttaacaagcaa--- +------------------------------cttcagatggcatcattcaagcacgacaaggagatgctacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgccgatgctgctagaggggctgttaatgccccaatgacgaagattctggactggaatggc +acaagatattgggcaccaaacagtatgaaaaccacaagctattcagg-acagttttctagcagccctgttca +ta-----------gatcctttgctaccccccagcatactgctcc---------------------------a +ccaa-------------------agggcaagttgcaa----------------------------------- +----------------------------------------------------------------------gg +tgattctg-----------ctagtgtgtacagttctccctctaccatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------gtccacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgactgggtcagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacgcataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-ctttctct---t--ctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305572.1/1-7520 |Norovirus GII isolate C110 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggaaacaccacaa +aga---------------------cccccacgaccgcccactccggagttgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaacgg------ggaggacgaaccagtgatt +tcttacaacg----------ccaa---gagtggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +tactggaacaatcctggagatgtgggatggggagatctaccattacggcttgtatgtggatcgaggcctggt +gctcggcgtgcacaaaccgccagcagctattagcctcgctaaggttgaactgacaccactctctttgttttg +gagacctgtctacacccccc---agtacctcatctccccagacacccttaggagattacatggtgaatcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgctgggttttggacctgaacgactcatggtt +gag---taggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcctct +ccccaccatggatgattctaaattaaagaaagtggccaacatattcctgtgtgctttgtcttcactattcac +cagacctatcaaggacataataggaaagctaagacctcttaacattctcaatattttagcttcatgtgactg +gacctttgcaggcatagtggagtctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactatgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtagtaatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttgaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaaacaatcatttgaccactctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgctctcctggcgaggatcgcggctgcccgttccctggtgcaccgagcaaaagaagaact +ttccagcaggccaaggcctgttgtcgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaaaatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggatgcgtacaagggagaaagggtcgtcctttgggatgactacggtatgagtaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactaaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcattgacttcctcgtgtacgccgaagctcctgatgttgagaaagcga +agcgcgacttcccaggccaacctgacatgtggaagaatgctttcagccctgacttctcccacataaagctga +tgctggccccgcagggtggctttgacaagaatggcaataccccacatgggaagggtgttatgaagaccctca +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcaggcagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaggtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtagtgtgagggttgacaaggtccagagtgccactgtgcaaaccaacaacgaactagccggcgccc +tgcatcatctcaggtgcgccaggatcagatactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaagccacaactggaggatacggaaga--------agccactggtaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtctcatccgacgacatcaaggttgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggtaaatactctatagaggagtacctccaagacagagacaagtat---t +atgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaagaagaggccaagattcgacaga +gaatctttaggccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggttctgaga +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaaacaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacattactcatcaag +agaccaactggtgagctcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgt +actgttggaggtcaaatgggtatgctcctgacagggtccaatgccaaaagtatggacctgggcaccacacct +ggcgactgtggttgtccctacatttacaagagaggaaacgactacgtggtcatcggggttcacacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagcgaaggtgaggccacacttgagggcggtgac +aacaagggtacttactgtggcgccccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agaattaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggagccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccattattaacgtccttgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgactccagtttacacaggtgccctcaaggatgagttggttaaa +acagacaagatatatggcaagattaagaagagactactttggggatcggacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgaactcaaggcccactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaggcactccaggtataggtatcactatgatgcagactat +t-ccagatgggactcaacacaacaaagagctatattggctgcggccctagagatcatgg-tcaaattctccc +cagagccgcactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggatgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtgccttgcacttcacaatggaactctattgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacatcgttcaagccaattctctcttc +tctttctatggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacggcaaagctg +aaggaatacggactgaagccaacccgccctgacaagactgaaggacccctaatcatttctgaggatctaaat +ggtttgaccttcttgcgaaggactgtaacccgtgatccagctggttggtttggtaaattggaacaaagttca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagaaccgatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgctgccattgcagcacctgtagcaggccagcaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatttgaacccctatctctctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggcctaagccccagtcaggttactatgttcccccatat +aattgtggatgttaggcaattggaacctgtattgatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tccaccctcaaattgatagcaatgttgtacacaccactcagagctaacaatgc +cggggatgatgtctttacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaacatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggac------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgacccaacagaagaaatcccagc +tcccctgggaacaccagactttgtaggaaagatccaaggtttgctcacccaaa------------------- +-----ct-----acaagagcggacggctcgacc--------cgc-----------gcccacaaggccacagt +gagcaccgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgatacgga +caatgattt---cctaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccgccttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaggcagccccagcaca +atccgatgtggccctgctgaggtttgtgaacccagacacaggtagggttctgtttgagtgcaaactccataa +gtcaggctatatcacagtggctcatactggcccatatgatttggttatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttctggactt +ggttctctaatcagtgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaatagaaaattg +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccagcatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcagcaagaattgatgaaagttaaacaggcagtgctcctagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacacccccatgacaaaggctctggactggagcgga +acaaggtattgggctcctgatgccaggatcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggagcatt---------------------------------g +cctggga----------------gaaccaatcctagggttcc------------------------------ +------------------------------tgcatctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attccaatca------aactgcttcaac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcaagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacaaaaatttgtcgcctttcatga---agggggctctcaacacatcatttgtgacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaatacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305573.1/1-7485 |Norovirus GII isolate HK4 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------------gcagtgca---aacgctaccagc +g------ac----agcattcaagactcccagaataacaacgagggagt------ctcattattatccaacgt +aaaggttggatttaaaaaga----tgttagggtcttccaccagagataga-------------ccaccaact +ccggtgga----------------aagaccacaacaaactgttaaaataaaaggggagatgttacgggtccc +tga-----------------------------cccccctccaaacgg------ggaagat------gtggtg +acctacaaga----------gggatggagaccaaataacaggtatacctgatttgacaacagt---ccgaga +tgaaactggcaacaccccctacactgtgccacctcttagtgagagagagcacaggccagccaccgaaccact +acctggctcaattcttgaaatgtgggacggcgagttcttccattacgcactatacgtggagaatgggaaagc +attgggcgtgcacaaaccacccgccgccatcagcatggccaccatcgagctcacaccaatctcactgtactg +gagggtggtttacacccccc---cgtacctcgtgtcaccagactcccttaagggattggctggggagaaatt +tccgtacaccgcgttcagcaacaattgttacaacttttgttgctgggtgctcgagttgaatgacacctggct +atc---gaggaagtcgatcacaaggactacaggtttcttcagaccctaccaaacctggaacagaaaaccggc +accttccgttgacgacagcaaaatcaagaaagtcgctaacgcgatactgtgtgctcttgggtccctcttttc +taggcccatcaaagatctcctagggaagttgaagccactgaacgtactcaatctattggcttcgtgtgattg +gtcattctcaggtgttgtagaaaccatggccttgctggcagaactcttt---ggtgtcttttggagcccccc +agacatatccaactttatcacctcaatcataggggatatggagctgcagggcccccaagacctcgctgctga +cttggtcccagtggtcatgggtggcatcggcatggtccttggattcaccacagagaagctcggccggatgct +gacctccgcagcatccaccttgcgcgcgtgtaaagatcttggtgggtacgcgcttgacatactcaaacttgt +catgaagtggttcttcccccccaaggaagaaaaggcagagatggagacactcagggcaatagaggatgcagt +cctcgatatggaagctataggaaataaccacttgaccagcttgctcaaggacaaagacagcctccaagcata +catgaaaacccttgacatggaagaagagaaagctaggaagctgtctacaaagtcttcatcacctgacatagt +tggcacgattaatgctatactggctagaatcgcagctgctaggtcgctcttacacaaagcaaaggaagagat +gtgttcaagaataagacccgtcgtcgtcatgatatcaggccgccccgggattggtaaaacccacatggcaag +acatctggcaaaaacggtggcaggtacaatgactggcgaccaaagagttggccttgtgcctaggaatggggt +tgaccactgggacgcgtacaggggtgagagaattgtgctgtgggatgactatggcatgggcagccccgtgaa +ggacgcactaaccctccaggaattggctgacacctgcccagtgaccttgaactgtgacaggatagaaaacaa +aggaaaaatgtttgacagtgatgtcattgtgataacaaccaatcttgccaacccagcgcccctcgactatgt +caacttcgaggcgtg-ctcgagacgaattgacttcctcgtctatgctgaggccccagaggtcgagaaggcca +agaaagacttccccggccaacctgacatgtggaaagattacttcaaacctgacttctcccacataaaattga +ccctcgccccccaaggtgggtttgacaagaacggtaatacgccccatggaaaaggagtgatgaagactcttt +cgcaagggtcgctcacggcaaggatcgcgggactcgttcacgagaggcgcgacgagttccagcttcaaggcg +aagacatacaaacttatgattttgacaccagcacaattggctcgttccggaaactggctgcagacaacaaat +acagcctgatggagacaatgagggtcggtaaacagcttaaagatgtcaagaccatggatcaactcaagctcg +ctatcaaagacttcagggtcaaagagtgcaagatcatatataagggaaacctgtataggatgtcatcagatg +gcaaggggaaggttagtgtcaacagggaagcttctgccaccagtcagactgtcaatgaggccatatcagcca +tcaaccggttgagacaggcaagaatcaggttctatgtgcaaagtgcccaggagatcatcctgaccttgctgc +aagtggcgggagccgcctttgttgttg---------------gcagga------tatcaaggaggttcaact +ggggcaaagccattggagaggacaaaac------------gatagagggagaccacgaccaac---ccgcag +agactggcagtgaca---agtggaagataaagattgatgacgctgagactgagggtaagaaaggtaagaaca +agaaagggagaggcaagaaacacacagctttctccagcaagggcctcagcgatgaagagtacgatgagtaca +agagaatcagggaagaaagaaatggaaagtactccattgaagaatacctccaagacagagacagatac---t +atgaggagctcgccgtagccagggcgacagaggaggatttctgtgaagaggaggaaataaagatcagacaaa +gaatcttccgcccaacaaggaaacaaagaaaagaagaaaggggcgtgttgggcttggtcactggctctgaaa +tcaggaagagaagaccagatgatttccagccaaagggaaaactgtgggctgatgatgaccggaatgtggact +ataatgagagactagactttgaggccccacccagtatatggtctcgcatagtcccatttggcaccggctggg +ctttctgggtatcgc-ctagcctcctgataacaaccacccatgtagtgccgaagggactaaatgaagccttt +ggcgttgacatcaaacaaatacaagtccacaggtccggtgagttctgtaggctcaggttcccaaggccaatc +aggacagatgtgactggcatgatcctcgaagagggcgcaccagaagggacggtttgctcgattctgataaag +cgtgccactggtgagatgctccctctagctgtccgcatggggacacatgcttcaatgaagatacaaggcaag +acagtaggtggacagatgggcatgctgctcactggctcgaatgcaaagaacatggacctcggcacgagccca +ggggactgtggctgcccgtacgtctacaagaggggcaacgatctggtggtggcaggagtgcacactgcagcg +gcccggggtggcaacaccgtgatctgtgccacacagggggcggaaggagaggcgacccttgaagggaaggag +aaccttggaacctactgtggggcccctatactatccactggcaaggcaccaaagctcagtaccaaaacaaaa +ttctggaggtcatcaccagaggcattgcccccggggacctatgaacctgcctacctcggcgggaaagaccca +agggtggagaatggcccgtccctgcaacaagtcatgagggaccaactaagacctttcactgagcccaggggg +aagccaccaaaccccaaagtccttgaagaggccaagaagactatcatgaatgtcctggaacagacaatagac +ccaccacaaaaatggacgtaccagcaggcatgccagtccctggacaagacaacgtccagtggtagcccgcat +catgtcagaaagaatgaacactggaacggggaatcgtttactgggccacttgccgatcaggcttctaaagcc +aacctaatgtatgagcagggcaagcacatgaaaccaatgtacacagcagcattaaaggatgaattggtcaaa +actagcaaattgtacaaaactataaagaaaagactcttgtggggatcagaccttggtacaatgattcggtgt +gcgcgggcatttggcgggctccttgacagtatgaaggccagctgtatagcactaccctgcagagtgggcatg +aacatgaatgaagatggccccatcatcttcgaaaaacattctaggttcaaataccattatgatgctgattac +t-ccaggtgggattcaacacaacagagggcagtgctagcagctgctatggaaatcatgg-tgaagttctctg +ctgaacctgagct-ggcacaagtagtcgcagaggacttggtggcccctagcagtcttgatgtcggtgatttt +gtggtgtctgtccaggaaggcctaccatctggagttccatgcacatcacagtggaactccatctcccactgg +ctgctaaccctttgtgctatgtcagaagtctctggattgtcacccgatgtggtccaggcatattccctgttc +tctttttatggtgacgatgagatagtgagcaccgacattgatatcgacccagagaagctcacacaacaactg +aggagctatggactcgtgcccactaggccagacaaaaccgagggcccgctgattatctctaaagacctcaca +aatctgaccttcctgagaagaaccatcacaagagatcctgcaggatggtttggaaagctggacaaagattca +atactcagacaactctattggacaaaggggccaaatcatgagaatccatatgagagtatgataccacatgca +cagagagcaacacagctaatggcactcctaggagagtctgccctgcacggccctcaattttacaaaaaggtt +agcaaaatggtgattagtgaaataaagagtggtggtctggagttttatgtgcccagacaagaggccatgtac +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatctggctcccgactatgtgaatgaa +gatggcgtcgaatgacgcagctccatctag---tgatggtgcagcaggcctcgtaccagagatcaataatga +ggtcatgccccttgaacccgtggctggtgcatcgctggcgacaccagtcgtcgggcaacaaaatataattga +tccctggataagaaataattttgtgcaggctcctgcaggtgagtttactgtttcccctagaaattcccccgg +agagatcttgcttgatttggaattgggaccagaattaaacccctatcttgcccatttggcccgcatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgctggctgggaatgcgttcacagc---aggcaagatcat +atttgctgccatccccccagggttcccatatgaaaatttgtcaccttctcaaattacaatgtgcccacatgt +cataattgatgttaggcaattggagccagttcttttgcctatgccagacattaggaataatttcttccatta +taatcagggcaatgat---ccaaaattgaggctagttgctatgctctacactcctttaagggccaataactc +tggtgatgatgtgttcacagtttcttgcagggtgcttacaaaaccttcacccgactttgaattcacattctt +agtcccccccacagtcgagtctaagaccaaacagttcaccttgcccatcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtgccagtggatgtgatgtacacggccaggaatgagaaccaggtcgtccaaccaca +gaatggtagagttacgctcgacggtgagctgttgggcaccacccccctgctggctgttaatatatgtaaatt +taagg-----------------------------------------gagaagtcatagccaa---------- +----------gaatggagatgt-----------------------------------gaggtcctacag--- +--aatggata-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggaacacctattgaccctacagaggacacacccgg +tcccattggctcaccagattttcaaggcatactctttggcgttgccagtcagc---gcaataagaatga--- +------------gcagaa-----ccctgccacg--------agg-----------gctcatgaggccaacat +caacactggtggggaccagtatgcccccaaactagcccaagtgaagtt---ct---------tttcagagtc +ccaagattt---tgaggtgcaccaacccacga---------------------------tcttcaccccgg- +--------ttggagtggcagggg---acacct---------ctcacccgttcagacaatggacgctgccacg +atacggtggacac-ctcacc------aataatacccatctggctccagcagtggcaccactgttcccaggag +agcagctcctgtttttcaggtcacaaataccca------gttctggtggtca------tgaac--------- +--agggttacatggattgtcttgtcccacaagaatgggtccagcacttctaccaggaagctgccacggccca +atctgaggtggccctcataagattcatcaacccagacaccggtagagtcctctttgaggctaagctacacaa +gcaaggctttataactgtggctcacaccggtgacaatccaattgtcatgccaccgaatgggtacttcagatt +tgaggcttgggttaatcagttttattcacttgcccccgtgggaactgggaacgggcgtagg---------ag +ggtcc---------aataatggctagtgctttctttgcaaatttggctggaggtgttgcctccaatggaatt +agttcacttataaatgctgg---ggctaatgccatcaaccagaaggttgagtttgattataacaaacaa--- +------------------------------ctccaaaatgcatcattttcacatgacaaggaaatgctccaa +gcccaaattgaagctaccaaacgcctgcaacaagagatgattgacataaaacagggtgtgttgtcagctgca +gggttctcccccacggatgccgcgaggggctccgtcaatgcaccaatgacaaagttagtggattggaatggt +accagatattgggcacctggtgctatgagaacaacaggctattcagggaccttctctcacctgtctcctatg +ca-----------acttgccccacatatta-----------gta---------------------------a +tcagagtg--------------ggcaatcccctaagg----------------------------------- +----------------------------------------tagatcttccctcccc---------------- +---ttcct-----------tgagtgg------------ttcttcagtttcttcta----------------- +---------------------ttaaaacaca---atcaaccaccctttcggg-cacttcaag--------aa +ctggctc----t---tcgtc-------------------acagtcaactctgt---------cgaccagacc +---------------------------------------gagctcaagaacatccgactgggttcgcagtca +gaatgagaggctgagcccattcatga---atggagcgttacaaacaacctacgtgacgccaccatccagcaa +ggcatca---agtg------------------------------tcagca---cagtctcaaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcgtaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggaaaa-----------------cttttcc------cg-cttttctt---taattctttc +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305574.1/1-7492 |Norovirus GII isolate HK46 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcccaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acccccacgaccgcccactccggagttggtc-------aaaaagatccc +gcc-----------------------------tcccccgcccaacgg------ggaggacgagttagtggtc +tcctatagtg----------ttaa---agatggcgtctccggtttgcctgagctctctaccgtcagtcaacc +agacgaggccaacacagcatttagtgtccccccattaaaccaaagggagaacagagatgctaaggaaccact +gcccggcaccatcttggagatgtgggacggagagatctaccattatggcctgtacgtggaacggggtctggt +gcttggggtacacaaaccaccagcggctattagtcttgccaaggttgagttgacaccattgtctctatattg +gagaccagtgtatacccccc---agtaccttatgtccccggacactctcagaaagctacatggagaactatt +cccttatacggcctttgataataactgttatgccttctgttgttgggttttagatctaaacgactcttggct +tag---caggagaatgatacagagaacaactggctttttccggccctaccaggactggaacagaaagcccct +tcccaccatggatgattccaaattgaaaaagatggccaatataatactgtgtgctttgtcatcgctgtttac +caggcccattaaggacataattggaaagttgagacccctaaacatcctcaatatattggcttcctgcgattg +gacttttgcaggtatagtagaatccctaatcctcttggcagagctcttt---ggagttttctggacgccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctacagggacctgaagatcttgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaagaaaagattggaaaaatgct +atcatctgctgcatccactcttagggcttgtaaagaccttggagcatacgggttggaaatcttaaaattggt +catgaagtggttcttcccgaagaaagatgaggcaaacgagctcgcaatggtgagatccatcgaggacgcagt +attggatctcgaagcaattgaaaacaaccacatgacctctttgctcaaagacaaggacagtttggcaaccta +catgagaactctagatcttgaagaggagaaggctagaagactctccaccaagtctgcctctcctgacattgt +gggcacaatcaatgccctattggcgcggatcgcagccgcccgctccctggtgcatcgggcaaaagaagagct +ctctagcaggccaaggcccgttgttgtgatgatatcaggcaaaccaggaataggaaagactcacctcgctag +agagttagcaaagaaaattgcagccaccctcacaggagatcagagggtgggccttgtcccacggaacggtgt +tgaccactgggacgcatacaaaggtgagagagtcgtcctttgggatgactacgggatgagcaatcccattca +cgacgccctcagactgcaagaacttgctgacacgtgccccctaacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgacgctataatcattacaactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcattgacttcctcgtgtatgctgatgcccctgatgttgaaaaggcga +agcgcgactttccaggacaacctgatatgtggaaggacgctttcaaacccgacttctcacacataaaactaa +tgctggcccctcaaggtgggtttgataagaacggcaacaccccacacggaaagggcgtcatgaaaaccctca +catctggttctctcattgcacgtgcatcagggctcctccatgaaagattggacgaatacgagttgcaaggcc +caacgcccacaaccttcaatttcgaccagaacaaggtctttgctttcaggcaactcgctgctgaaaacaaat +acgggttgatggacactatgagagtgggaagccagctcaagggagtcaaaactgtgtcagagcttaagcagg +cgctcaagaacatcgcaattaaaaggtgtcagatagtctacaatggttccacatactcacttgaatctgatg +gcaaaggtaatgtgaaagttgagaaggtacagagtacaactgtgcaaacaaacaatgagctatctggtgcgc +tacaccacctcaggtgcgccaggatcagatattatgttaagtgtgcccaggaggccctttattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctctggt +ctaagccacaggtggaggatgcagaaga--------aaccatcaataaagatgggtgtccaaagccaaaa-- +-gat----gatgagg---aatttgtcatctcgtctgaagacatcaaagtcgagggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcaagcaagggtctcagtgatgaggagtacgatgaataca +aaagaattagagaagaaagaaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaggaagaggaagccaaaatccgacaga +ggattttcagaccaacgaggaaacaacgtaaagaggagagggcttctcttggcctggtcacaggctcagaaa +tcaggaagaggaacccagacgacttcaaacccaagggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgagaaactcagctttgaagctcccccaagcatctggtcaagaatagtcaactttggttcaggttggg +gtttctgggtttcac-caagtttgtttataacatccacccatgttatacctcagggatcacaggagttcttc +ggggtttccattaaacagatccaaatccacaaatcgggtgagttctgccgactaagatttccaaaaccaatc +agaactgatgtgacaggcatgatcctggaggaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggaactcatgccactggcagctaggatgggcacccacgcaactatgaagatccagggtcgc +actgttgggggccaaatgggaatgctcttgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtgggtgtccatatatctacaaaagaggaaatgactacgtggtcattggagtccacactgccgcc +gctcgcggggggaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgcttgaaggtggtgac +aacaaaggcacctattgcggtgccccaatcctaggtccaggaaatgcccccaagctcagcactaagaccaaa +ttttggaggtcctcaacagctccactcccacctggcacatacgaaccagcctacctcggaggtaaggacccc +aggatcaaaggtggcccctcattacaacaagtcatgagggatcaattaaagccattcatggaacccaggggc +aaaccaccaaacccaagtgtgctagaagctgccaaaaagaccatcattaatgttcttgaacaaacaatagac +ccaccacagaaatggtcatttgcacaagcatgcgcatcgcttgacaaaaccacctccagtggctacccgcac +cacatgcggaagaatgaatgttggaatggagagtccttcacaggaaaattggcagaccaagcttcaaaagct +aacctaatgtatgaggaaggtaaaaacatgaccccggtctacacaggtgccctcaaggatgagctagtcaaa +actgacaaaatatatggcaagattaagaagaggctcctctgggggtcagacttggcaaccatggtccggtgc +gctcgagcattcggagggctaatggatgaactcaaggcccactgcgtcacactccctattagggttgggatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtacaactaccattatgatgcagattac +t-ctcggtgggattcaacacaacagagggctgtgttagctgcagctctagaaatcatgg-taaaattttccc +cagaaccacacct-agcccagatagtcgcagaagaccttttgtcccccagtgtgatggacgtgggcgatttt +aaaatatcaatcactgaagggctcccctctggggtgccttgcacctcacaatggaactccatcgcccattgg +ctcctcacactctgtgcactctctgaggtaacaaatttatcccctgacaccatccaagcaaattctcttttt +tctttctatggtgatgatgaaattgtgagcacagatattaaattggatccagaaaagctgacagctaaattg +aaagagtatgggctaaaaccaactcgccctgataagactgaaggacctctggtcatctctgaggacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggaacagagctca +atacttagacaaatgtattggaccaggggccccaatcatgaggacccctccgaaacaatgataccacattcc +caaagacccatacagctaatgtccctactaggtgaagctgcactgcatggcccatcattctacagcaagatc +agtaagctagttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggtgggtgcagcgatagcagcacccctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaattttccaattgataatctgagcgcagcacaaattacaatgtgcccgcatgt +gattgtggatgtcaggcagctggaaccaattaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgctgtatacacctcttagggcaaacaattc +cggagatgatgtttttactgtgtcctgtagagtattaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagataaaacccttcaccctccccattctgactatctctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctgcacaccagcccgactgagaacattgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggtaccacccaactcttgccgagtcagatatgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaagccgacacagcaacccctaggttattca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggacaatctaaatggaaccccctacgaccctgcagaggacataccagc +ccctctgggaacaccagacttccggggcaaggtctttggcgtagccagccaga---gaaa------------ +-----cc------------ctgacagcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcaccccgaaattgggctccctagaaatatcc------------actgaatc +cggtgactt---tgacccaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------tgaggcagattttcagcaatggtccttacctga +ctattccggtcag-ttcact------cacaacatgcacttagccccagctgtcgcccccaattttcctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcgg-----tcaa---------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtggccctggttaggtatgttaaccctgacactggtagagtgctatttgaggccaagctacataa +attaggtttcatgactatagctaagaatggtgactctccaataaccgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaagtactgtg +ggatctttagttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcccgtggggcaattaatgcccccataacaagagttttggactggagtgga +acgaggtactgggcaccaagcgccacctccacaacctcaatgtcaggtggcttcaca-agcca--------- +aa-------------ctgtacacagaaccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaagtccacacccagcagtgggtcttcagtgagatca +aactcaacccaactcac--tagcttgagctcacactcatccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cggttgttagctcattgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatttcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------tct-taa--------------------attt-a--------gt-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305575.1/1-7518 |Norovirus GII isolate HK54 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcccaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acccccacgaccgcccactccggagttggtc-------aaaaagatccc +gcc-----------------------------tcccccgcccaacgg------ggaggacgagttagtggtc +tcctatagtg----------ttaa---agatggcgtctccggtttgcctgagctctctaccgtcagtcaacc +agacgaggccaacacagcatttagtgtccccccattaaaccaaagggagaacagagatgctaaggaaccact +gcccggcaccatcttggagatgtgggacggagagatctaccattatggcctgtacgtggaacggggtctggt +gcttggggtacacaaaccaccagcggctattagtcttgccaaggttgagttgacaccattgtctctatattg +gagaccagtgtatacccccc---agtaccttatgtccccggacactctcagaaagctacatggagaactatt +cccttatacggcctttgataataactgttatgccttctgttgttgggttttagatctaaacgactcttggct +tag---caggagaatgatacagagaacaactggctttttccggccctaccaggactggaacagaaagcccct +tcccaccatggatgattccaaattgaaaaagatggccaatataatactgtgtgctttgtcatcgctgtttac +caggcccattaaggacataattggaaagttgagacccctaaacatcctcaatatattggcttcctgcgattg +gacttttgcaggtatagtagaatccctaatcctcttggcagagctcttt---ggagttttctggacgccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctacagggacctgaagatcttgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaagaaaagattggaaaaatgct +atcatctgctgcatccactcttagggcttgtaaagaccttggagcatacgggttggaaatcttaaaattggt +catgaagtggttcttcccgaagaaagatgaggcaaacgagctcgcaatggtgagatccatcgaggacgcagt +attggatctcgaagcaattgaaaacaaccacatgacctctttgctcaaagacaaggacagtttggcaaccta +catgagaactctagatcttgaagaggagaaggctagaagactctccaccaagtctgcctctcctgacattgt +gggcacaatcaatgccctattggcgcggatcgcagccgcccgctccctggtgcatcgggcaaaagaagagct +ctctagcaggccaaggcccgttgttgtgatgatatcaggcaaaccaggaataggaaagactcacctcgctag +agagttagcaaagaaaattgcagccaccctcacaggagatcagagggtgggccttgtcccacggaacggtgt +tgaccactgggacgcatacaaaggtgagagagtcgtcctttgggatgactacgggatgagcaatcccattca +cgacgccctcagactgcaagaacttgctgacacgtgccccctaacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgacgctataatcattacaactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcattgacttcctcgtgtatgctgatgcccctgatgttgaaaaggcga +agcgcgactttccaggacaacctgatatgtggaaggacgctttcaaacccgacttctcacacataaaactaa +tgctggcccctcaaggtgggtttgataagaacggcaacaccccacacggaaagggcgtcatgaaaaccctca +catctggttctctcattgcacgtgcatcagggctcctccatgaaagattggacgaatacgagttgcaaggcc +caacgcccacaaccttcaatttcgaccagaacaaggtctttgctttcaggcaactcgctgctgaaaacaaat +acgggttgatggacactatgagagtgggaagccagctcaagggagtcaaaactgtgtcagagcttaagcagg +cgctcaagaacatcgcaattaaaaggtgtcagatagtctacaatggttccacatactcacttgaatctgatg +gcaaaggtaatgtgaaagttgagaaggtacagagtacaactgtgcaaacaaacaatgagctatctggtgcgc +tacaccacctcaggtgcgccaggatcagatattatgttaagtgtgcccaggaggccctttattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctctggt +ctaagccacaggtggaggatgcagaaga--------aaccatcaataaagatgggtgtccaaagccaaaa-- +-gat----gatgagg---aatttgtcatctcgtctgaagacatcaaagtcgagggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcaagcaagggtctcagtgatgaggagtacgatgaataca +aaagaattagagaagaaagaaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaggaagaggaagccaaaatccgacaga +ggattttcagaccaacgaggaaacaacgtaaagaggagagggcttctcttggcctggtcacaggctcagaaa +tcaggaagaggaacccagacgacttcaaacccaagggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgagaaactcagctttgaagctcccccaagcatctggtcaagaatagtcaactttggttcaggttggg +gtttctgggtttcac-caagtttgtttataacatccacccatgttatacctcagggatcacaggagttcttc +ggggtttccattaaacagatccaaatccacaaatcgggtgagttctgccgactaagatttccaaaaccaatc +agaactgatgtgacaggcatgatcctggaggaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggaactcatgccactggcagctaggatgggcacccacgcaactatgaagatccagggtcgc +actgttgggggccaaatgggaatgctcttgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtgggtgtccatatatctacaaaagaggaaatgactacgtggtcattggagtccacactgccgcc +gctcgcggggggaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgcttgaaggtggtgac +aacaaaggcacctattgcggtgccccaatcctaggtccaggaaatgcccccaagctcagcactaagaccaaa +ttttggaggtcctcaacagctccactcccacctggcacatacgaaccagcctacctcggaggtaaggacccc +aggatcaaaggtggcccctcattacaacaagtcatgagggatcaattaaagccattcatggaacccaggggc +aaaccaccaaacccaagtgtgctagaagctgccaaaaagaccatcattaatgttcttgaacaaacaatagac +ccaccacagaaatggtcatttgcacaagcatgcgcatcgcttgacaaaaccacctccagtggctacccgcac +cacatgcggaagaatgaatgttggaatggagagtccttcacaggaaaattggcagaccaagcttcaaaagct +aacctaatgtatgaggaaggtaaaaacatgaccccggtctacacaggtgccctcaaggatgagctagtcaaa +actgacaaaatatatggcaagattaagaagaggctcctctgggggtcagacttggcaaccatggtccggtgc +gctcgagcattcggagggctaatggatgaactcaaggcccactgcgtcacactccctattagggttgggatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtacaactaccattatgatgcagattac +t-ctcggtgggattcaacacaacagagggctgtgttagctgcagctctagaaatcatgg-taaaattttccc +cagaaccacacct-agcccagatagtcgcagaagaccttttgtcccccagtgtgatggacgtgggcgatttt +aaaatatcaatcactgaagggctcccctctggggtgccttgcacctcacaatggaactccatcgcccattgg +ctcctcacactctgtgcactctctgaggtaacaaatttatcccctgacaccatccaagcaaattctcttttt +tctttctatggtgatgatgaaattgtgagcacagatattaaattggatccagaaaagctgacagctaaattg +aaagagtatgggctaaaaccaactcgccctgataagactgaaggacctctggtcatctctgaggacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggaacagagctca +atacttagacaaatgtattggaccaggggccccaatcatgaggacccctccgaaacaatgataccacattcc +caaagacccatacagctaatgtccctactaggtgaagctgcactgcatggcccatcattctacagcaagatc +agtaagctagttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggtgggtgcagcgatagcagcacccctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaattttccaattgataatctgagcgcagcacaaattacaatgtgcccgcatgt +gattgtggatgtcaggcagctggaaccaattaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgctgtatacacctcttagggcaaacaattc +cggagatgatgtttttactgtgtcctgtagagtattaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagataaaacccttcaccctccccattctgactatctctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctgcacaccagcccgactgagaacattgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggtaccacccaactcttgccgagtcagatatgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaagccgacacagcaacccctaggttattca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggacaatctaaatggaaccccctacgaccctgcagaggacataccagc +ccctctgggaacaccagacttccggggcaaggtctttggcgtagccagccaga---gaaa------------ +-----cc------------ctgacagcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcaccccgaaattgggctccctagaaatatcc------------actgaatc +cggtgactt---tgacccaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------tgaggcagattttcagcaatggtccttacctga +ctattccggtcag-ttcact------cacaacatgcacttagccccagctgtcgcccccaattttcctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcgg-----tcaa---------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtggccctggttaggtatgttaaccctgacactggtagagtgctatttgaggccaagctacataa +attaggtttcatgactatagctaagaatggtgactctccaataaccgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaagtactgtg +ggatctttagttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcccgtggggcaattaatgcccccataacaagagttttggactggagtgga +acgaggtactgggcaccaagcgccacctccacaacctcaatgtcaggtggcttcaca-agcca--------- +aa-------------ctgtacacagaaccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaagtccacacccagcagtgggtcttcagtgagatca +aactcaacccaactcac--tagcttgagctcacactcatccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cggttgttagctcattgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatttcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------tct-taa--------------------attt-a--------gt-ttag-attggatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305576.1/1-7501 |Norovirus GII isolate HK74 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaac +g------ac----agtactaacaccaccccttctaatagagaagaggt------tggtgcgttttccaacat +taaagttggatttaagaaaa----tgctgggtgccgtgcccaagggcacc-------------aaaacgccc +agcagtga----------------tcaacactgccccacagttaagatcgggcctaagacattagtgatccc +acc-----------------------------tgagcctccaaatgg------agaagat------gtcgtg +cagtttgatg----------cgaagttggaaactgtacgtgggttaccagacttgacaacggt---gcaaaa +tgagcatgaaaacaccccatacacagtccccccactaagtgaaagggaacatagaccagccactgagcccct +ccctggcacaatactggagatgtgggacggtgagttctaccactactccgtctatgtcagcggaggcaaagc +cctgggggtccacaaaccccctgcagctataagcctcgcgacaattgagctcacccccatatctctttactg +gcggcccgtctacactccca---actacttggtttgtccagacacattaaagggccttgctggtgagaagtt +tccctacactgccttcagcaacaactgttacaacttctgttgctgggtgctggagctcaatgacacgtggct +tag---tagaagatgcatctccagaaccaccggcttctttaaaccgtaccagtcttggaataggaagcctct +tccaaccgtcgatgatgggaaaatcaaaaaggtggccaacgcaattctctgtgcgcttggctcgctgttttc +aaaaccaatcaaagatctattgggcaaactcaaaccactgaatctgctgcatctgctcgcgtcatgtgactg +gactttcgcgggtatagtggagacggtcatcttaatggcggaactcttc---aacgtcttttggactccgcc +ggatgtctccaatttcatagcatccctggtaggtgacttcgagttgcaagggcctgaggacttggccgtgga +gctcgtccctgtggttatgggtggcataggaatggttctcggtttcaccgctgagaaaataggccgcatgtt +gtcatctgctgcgtcaaccttgcgggcatgtaaagatctggggaactatgccctcgatatactcaagctagt +catgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccttaagagcgattgaggatgctgt +cttggatatggaggctataggaaacaaccacctcacgactctcctcaaggacaaggatagcctaacagcttt +catgaagaccctagacctggaagaggagaaagcaaggaagctgtcaaccaaatcatcctcgccggacatcgt +cggcaccattaatgccatactggccagaatagctgccgccagatctctcctacacaaagccaaagaagagat +gtttagcaggatcagaccagtggttgttatgatctcaggcaggcccggcattggcaagacccatatggcaag +acacctggctaagagcatcgccaataccatgagtggtgaccagagagtcgggctcgttccgcgtaacggggt +cgaccactgggacgcctacaggggggagagggtggttttatgggatgactacggcatggggagccctgtcaa +agatgcactaacactacaagaattggccgacacctgcccagtcaccttaaattgtgacaggattgagaacaa +gggaaagatgtttgacagtgacgtcattataatcacaaccaacttagtcaaccctgcacccctcgactacgt +gaacttcgaggcatg-ctccagaagagttgacttcctggtttatgcagagtcaccagaaatcgaaaaggtta +agagagattttcctggtcaacctgatatgtggaaagaccacttcaagccggatttttcccatataaagttaa +ctctagccccccagggcgggtttgataagaatggcaacactccgcatggtaagggtaccatgcgatctttaa +cccaggggtccctaactgcaagagttgctgggcttgttcatgagaggagagatgaatttcagctccaaggga +gcgacctccaaacatacaattttgacaccaacagggtctccgcattcaggaagctggctgcagacaacaagt +atggaatcatggagacaatgagagtgggtgcagcgctcaagaacgttaagactttggaagacctaaaagtcg +ccctgagagacgtgaagttcaatgagtgtgaaattatttacaggaactccaagtatcgagtctcttccaatg +gcaaaggctcagtttctgttgataaggtcgaggaccacacatcccaaactgcaaatgaggtgagctcagcac +ttttaagactcaggcaagcaagggccagatactatgtcagttgcttccaagaccttgtctacactctcatac +aggttgctggggcatcattcgttgtta---------------acagga------tctccaagagattctgtt +gggaaaggtgggttaaaccaactgagac-------------ccaggagacgagtgaacccga-----gaagg +agaccgctcagggca---ggtgggagattgaacccaaggacgcagaaccagaaggcaagaagggcaagaaca +agaaggggagaggcaagaaacacacagccttctccagtaaaggtctaagtgatgaagagtatgacgagttca +aaagaatcagagaagaaagaaatggaaagtactctattgaggagtacctgcaagaccgggaccgctac---t +atgaggaggtggcagttgcccgagcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccgacaaagaaacaaagaaaggaggaaagaggtgtgcttggcctgatcaccggctcagaca +tcagaaagaggaggccagacgacttccaaccaaaaggcaacctatgggcggatgatactagaagtgtggact +acaatgagagactcgactttgaggcccctccaagtgtttggtcgaggatagttccattgggcactggttggg +gtttctgggtctcat-ccaacctcttgatcacgacaacacacgtccttcctaagggactcaaagaacttttt +ggagttgaaatcaaacaaatccagattcacaaatctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacagggcttgtgttggaagaaggtgctccagagggcactgtttgctccatacttgtaaag +agacctacaggtgagatgattcccctggcagtgagaatgggcactcatgcgtccatgaaaattcagggcaga +accgtcggtggccaaatgggaatgcttctcacaggagcgaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggctgtccctacatctacaagcgcggtaatgacatagttgttgcaggagtccacaccgcggca +gcccgggggggcaacactgtcatctgtgccacccaagggcaagatggggaggcagtccttgaaggaaatgag +aatcatggcacatactgtggtgccccaattctcggtccaggcagagcgcccaaactcagcacaaagaccaaa +ttctggcgctcatcaccagacgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtagaaaaagggccctccctgcagcaagtcatgagagaccagttaaagccctttacagagcctaggggt +aaaccaccgagacctgcagtcctagaagaggccaaaaagacagtgatgaacgttttggaacaaaccattgac +cctgccaagccatggacctactcgcaagcatgtgcctcgctggataaaaccacatccagtggtagccctcac +catgtcaggaaaaacgaccactggaatggagaatccttcacaggtcccctcgcagatcaagcatctaaagcc +aacctcatgtatgaacaggccaagcatgtgcagcccgtgtatacggccgcgctcaaagatgaacttgttaag +actgataaaatctacaagaagataaagaagaggctcctatgggggtcggaccttggtacgatgatcaggtgc +gccagggcttttggtggcctcatggacagcatgaaggcgagttgcatagctcttccatgcagggtgggaatg +aacatgaatgaggacggccccatcatctttgacaagcactccaaatacagataccactatgatgctgactac +t-ctaggtgggattcaacccaacaaaggagcattctgtctgctgccatggaagtgatgg-tgcgattctccg +cagaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcaactagatgttggcgatttt +gtcatctcagttcaggaaggcctaccatcaggggttccatgcacgtcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcaggcctttcaccagatgttgtccaagcccactcctgtttt +tctttctatggtgatgatgagattgtcagcactgacatcaacctcgaccctgaaaaattgacacagaaactc +agagagtacggtctggttcctacccgacccgacaaaactgaaggtccccttgtcataactgaagacctagct +ggcctgactttcctgcgtaggtcaattgcacgggacccagctgggtggtttgggaaattggatcaggactca +atcctcaggcaattgtattggacaagagggcccaatcatgagaacccatacgaaagcatggtcccccattct +cagcgagccacacagctcatggccctcctaggtgaagcctcattgcatgggccccaattttacaagaaggtt +agtaagatggttatcagtgagatcaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcttccattgcagcccccgttgtcggacaacaaaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtctcccctagaaattctcccgg +agaacttttgcttgatttagagctgggccctgaactaaatccttatcttgcacatctggctagaatgtataa +tgggcatgcgggaggaatggaagtgcagatagtactagctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccacctagcttcccctatgaaaatttgtcacccgctcaactgactatgtgcccccacgt +gatagtggatgtgagacaactggaaccggttctcctgccaatgcctgacataaggaatgttttctatcacta +caaccaaaacaacagc---cccaaactcaggcttgtagcaatgctgtacactcctctgagagctaacaactc +aggtgatgacgtgttcacggtgtcatgccgcgttttaacacgtccctccccagatttccaattcacctttct +ggtcccacctacagttgagtctaaaactaaaaatttcactctacctgttctcagagtctccgagatgacaaa +ctcaagg---tttccagtcgttctggaccaaatgtacacgagcaggaatgaaaacatcattgtccaacccca +aaatggcaggtgcacgactgacggtgagctccttggcaccaccatcttgcagtccgtgtctatttgcaactt +taaag-----------------------------------------gaaccatgcaggcagaat-------- +---------tgagtgatcaacc-----------------------------------acgatac-------- +--------ca--------------------------------------------a----------------- +----------taccaactgcaacttaccaatttggatggctcacccatagacccaacagatgatgtgcctgc +ccctcttggcacaccagattttcaagctatgttgtatggcgttgcgagtcaac---gttcctccag------ +---------------aga-----caatgccact--------agg-----------gcacatgatgcacaaat +tgacactgcgggtgacacattcgccccaaagattggccaggttcgttt---ca---------aatcaagttc +caatgactt---tgacctacatgaccctacaa---------------------------aattcacgccca- +--------ttggcgtcaatgtgg---acgacc---------agcacccttttagacaatggtctctaccaaa +ttatggtggtcat-cttgcc------ctgaataatcatttggcccctgctgtaacgccactcttccctggcg +aacaaattttattcttcagatcatacattccaa------gcgctggaggtca------cacag--------- +--acggtgctatggattgcttgctaccccaagaatggattgagcacttctaccaagagtcagccccttccca +atctgacattgcattagtgaggttcataaaccctgacacaggaagagtgctctttgaagccaaattgcacaa +acaaggcttcctcacaattgcagcatctggagaccaccccatcgtgatgcccactaatggttatttcaggtt +tgaagcttgggtcaaccccttctacactctcgcccccgtgggaactgggtctgggcgcaga---------ag +gatcc---------aataatggcaggagctttccttgcaggcttggcaggcgatgttgtgacttccagtttg +ggctcgctcgtgggtgctgg---agccaacgccatcaaccaaaaagtggagtatgactttaacagacag--- +------------------------------cttcaggaggcatctttcagacatgacaaggacatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggctatgattgacatcaaacgggaggcattgaccgcaggc +ggcttttctcccgctgatgctgcgagaggtgcagtcagagcacctatgacacagatcctggattggaatggt +tccaggtattgggctcccaactccatgaggacaacaggttattcaggtacatttgtttcccagggtgtca-a +aa-----------atcttccccatttgtc-------------ta---------------------------g +tcaaactc--------------caagtatttctagacc---------------------------------- +-------------------------------------ctccagagcttcaccatccat-----------gtc +tagttctt-----------ctagtgtgtatagttctccctctactgctccttcgc----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cggg--------ga +ctgggtc----g---tccag-------------------gcctaacaccgcgt---------ccacaggaac +atccac-------------------act--------------gtctagaacaagtgattgggttagaggtca +gaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttacgtcacaccaccatcgagcaa +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg-------------------ttttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305577.1/1-7462 |Norovirus GII isolate KL90 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaagcaaccg-cccccgagggaaacaacacaa +aaacaaaa---------------acccccacgaccgcccactccagagttggtc-------aagaagatccc +gcc-----------------------------tcccccgcctaacgg------ggaggacgaattagtggtc +tcctatagtg----------tgaa---agatggcgtctccggtttgcctgagctctctaccgtcagtcaacc +agacgaggccaacacagcatttagtgtccccccactaaaccagagggagaacagggatgctaaggaaccact +gcctggcaccatactggagatgtgggatggagagatctaccattatggcctgtacgtggaacggggtctggt +gcttggagtacacaagccaccagcggctatcagtcttgccaaggttgagttggcaccattgtctctatattg +gagaccagtgtacacccccc---agtatcttatgtccccggacactctcaaaaagctacatggagaattatt +cccttacacggcctttgacaataactgttacgccttctgttgttgggtcttagatctaaacgattcttggct +tag---caggagaatgatacagagaacaactggctttttccgtccctaccaggactggaacagaaagcccct +tcccaccatggatgattccaaattgaaaaaggtggccaatataatgctgtgtgctttgtcatcactattcac +caggcccattaaggacataattggaaagttgagaccactaaacatcctcaacatattggcttcctgcgattg +gacttttgcaggtatagtagaatccctaatcctcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctacagggacctgaagaccttgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaagaaaagattggcaaaatgct +atcatctgctgcatccactcttagggcttgtaaagaccttggagcatacggattggaaatcttaaaattagt +catgaaatggttcttcccaaagaaagatgaggcaagcgagctcgcaatggtgagatccattgaggacgcagt +attggatcttgaagcaattgaaaacaaccacatgacctctttgctcaaagacaaggacagtttggcaaccta +catgagaactctagatcttgaagaggaaaaggctagaaaactctccaccaagtctgcctctcctgacattgt +gggcacaattaatgccctattggcgcggatcgcagccgcccgctccctggtgcatcgtgcaaaagaagagct +ttctagcaggccaaggcccgttgttgtgatgatatcaggcaaaccgggaataggaaagactcacctcgctag +agagttagcaaagaaaattgcagccaccctcacaggggatcagagggtgggtcttgtcccacggaacggcgt +tgaccattgggacgcatacaaaggtgagagagtcgtcctttgggatgactatgggatgagcaaccccattca +tgacgccctcagactgcaagaacttgctgacacgtgccccctgacactaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgctataatcattacaactaatctggccaacccagcaccactggattatgt +taactttgaagcatg-ctcaaggcgcattgacttcctcgtgtatgctgatgcccctgatgttgagaaggcaa +agcgtgactttccaggacaacctgacatgtggaaggacgctttcaaacccgacttctcacatataaagttaa +tgctggcccctcaaggtgggtttgataagaacggcaacaccccacacggaaagggcgtcatgaaaaccctca +catctggttctctcattgcacgtgcatcagggctcctccatgaaagattggacgaatacgagttgcaaggcc +caacgcctacaaccttcaacttcgaccagaacaaagtctttgctttcaggcaactcgctgctgaaaacaaat +acgggttgatggataccatgagagtgggaagtcagctcaagggagtcaaaactgtgtcagagcttaagcaga +cgcttaagaacattgcaattaaaaagtgccagatagtctacaatggttctacatactcacttgaatctgatg +gcaaaggtaatgtaaaagttgaaaaggtacagagtgcaactgtgcaaaccaataacgagctatctggtgcac +tacactatctcagatgcgccaggatcaggtattatgttaagtgtgtccaggaggccctttattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctttggt +ctaagccacaggtggaggatgcagaaga--------aaccatcaataaagatgggtgtccaaaacaaaaa-- +-gat----gatgagg---agtttgtcatcgcgtctgaagacatcaaagttgagggcaagaagggaaagaaca +agtctggccgaggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaggagtacgatgaataca +aaagaattagagaagaaagaaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaggaagaggaagccaaaatccgacaga +ggattttcaggccaacgaggaaacaacgcaaagaggagagagcttctcttggcctggttacaggctctgaaa +tcaggaagaggaacccagatgacttcaaacccaagggaaaattgtgggctgatgacgacagaagtgtcgatt +acaatgagaagctcagtttcgaagctcccccaagcatctggtcaagaatagtcaactttggttcaggttggg +gtttctgggtttcac-caagtttgtttataacatccacccatgttatacctcagggatcacaggagttcttc +ggggtttccattaaacagattcaaatccataaatcgggtgagttctgccgactaaggtttccaaagccaatc +agaactgatgtgacgggtatgatcctggaggaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggaactcatgccactggcagctaggatgggtacccatgcaactatgaagatccagggtcgc +actgttgggggccaaatgggaatgctcctgacaggatccaacgccaagagcatggacctgggtactatacca +ggtgactgtgggtgtccatatatctacaaaagaggaaatgactacgtggtcattggagtccacactgccgcc +gctcgcggagggaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgcttgaaggtggtgac +aacaaaggcacctattgcggtgcaccaatcctaggtccagggaatgcccccaaactcagtactaagaccaaa +ttttggaggtcctcaacagccccactcccgcctggcacatacgaaccagcctacctcggaggtaaggacccc +agagttaagggtggcccctcattacaacaagtcatgagagaccaattaaagccattcacggaacccaggggc +aagccaccaaacccaagtgtgctagaagctgccaaaaagaccatcattaacgttcttgaacaaacaatagac +ccaccacagaaatggtcgttttcacaagcatgcgcatcgcttgacaaaaccacctccagtgaccacccgcac +cacatgcggaagaatgaatgttggaatggagagtccttcacaggaaaattggcagatcaagcttcaaaagct +aacctaatgtatgaggaagggaaaaacatgaccccagtctacacaggtgcccttaaggatgagctagtcaaa +actgacaaaatatatggcaagatcaagaagaggctcctctgggggtcagatctggcaaccatgattcggtgt +gctcgagcattcggaggactaatggatgaactcaaggcccactgcgtcacacttcctattagagttgggatg +aacatgaatgaggatggtcccatcatctttgaaaagcactccaggtacaactaccattatgatgcagattac +t-ctcggtgggattcaacacaacagagggctgtgttagctgcagctctagaaatcatgg-taaagttttccc +cagaaccacacct-cgcccagatagtcgcagaagaccttctgtcccctagtgtgatggacgtgggcgatttt +aaaatatcaatcactgaagggctcccctctggggtgccttgcacctcacaatggaactctattgcccattgg +ctcctcacactctgtgcactctctgaggtaacaaatttgtcccccgacaccatccaagcaaattctcttttc +tctttctatggtgatgatgaaattgtgagtacagatattaaattggatccagaaaagttgacagctaaactg +aaagagtatgggctgaagccaactcgccctgataagactgaaggacctctggtcatctctgaggacttgaat +ggcctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggaacagagttca +atacttagacaaatgtattggaccaggggtcccaatcatgaggacccctccgaaacaatgataccacattcc +caaagacccatacagctaatgtccctattaggtgaagctgcactgcatggcccatcattctacagcaagatc +agcaagctagtcattgcagagttgaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagctagtctcgtaccagagggcatcaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtagcgggacaaactaatataattga +cccctggataagaacaaactttgtgcaagcccccaatggagaattcacagtgtcgccaagaaattcccctgg +tgagattttgttaaatttagaattaggaccagatctaaatccttatttggcccatctatcaagaatgtataa +tggttatgctggaggtgttgaggtgcaagtactccttgctgggaatgcgttcacagc---aggtaagatact +gtttgcagcaatcccccctaactttcctgtagacatgattagtccagcccagatcactatgcttccccactt +gattgtagatgttaggaccttggaacctatcatgatacctttgcctgatgttagaaatgtgttctatcactt +caacaaccaaccccaa---cctagaatgaggctagtagctatgctttacaccccattgaggtctaatggttc +aggagatgatgttttcactgtgtcttgtagagtgctaactaggccaactcctgattttgagtttatttattt +ggtacccccttctgtggaatctaaaaccaaaccattcacattaccaatactgaccatttctgaattgaccaa +ctctcga---ttccctattccaattgagcaattgtacacggccccaaatgagaacaatgttgtccagtgcca +aaatggcaggtgcaccttggatggtgagctccaaggcacgacccaactgctgtcaagtgcgatatgctctta +taggg-----------------------------------------gcaggactgt--ggc----------- +-----------caacaatgggg------ataattggg----------------------------------- +----------acc----------------------------------agaatctg----------------- +----------------ctccagctgacctatccaagtggtgcaagttatgaccccaccgatgaagtgccagc +accattgggcactcaggattttagtgggatgttgtatggagtgctgacccagg---acaa------------ +-----tacaaatgtgagtgcaggggaggccaaa--------aat-----------gctaagggaatatatat +atctaccaccagtgggaaattcaccccaaaaattgggtcaattggattgcat------------tcaataac +tgagcatgt---gcaccctaaccaacagtcgc---------------------------ggtttactcctg- +--------ttggagttgccgtgaatga------------gaatacccccttccaacaatgggttctaccaca +ctatgcaggtagc-cttgct------ctcaacaccaatttggcacccgctgttgccccaaccttccctggtg +agcaattgttattcttcaggtcccgtgttccatgt---gttcaaggccagca--------------ggggca +agatgtgttcatggattgtctcctaccccaagagtgggtaaatcatttttatcaagaagcagctccttctca +agcagacgttgccctcatcaggtatgtcaaccctgacactggccgtacgctgtttgaagccaaattgcatag +atcaggtttcatcactgtgtcacatactggtgcttaccctcttgtggtccccccaaatggtcactttaggtt +tgattcttgggttaatcaattttattcactcgcccccatgggaactggcaatgggcgcagg---------ag +aattc---------aataatggcaggagcatttatagctggtttagccggtgacatgttgacttctgctgtt +gggtcactgacctctgcagg---agccaatgccatcaaccaaaaattaaattttgattacaacaaacaa--- +------------------------------ctccaaagcgcatccttccagcatgacaaggaaatgttgcag +gctcaaattgacgccacaaagaagctccaatcagagatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgacaagagtgttggattggtcagga +acacgctactatgccccaaattctgcacaaaccactagttactctgggcaattcacc-ccctc--------- +gc-------------cagttcatcgggtg------------------------------------------- +--caggt----------------gaagccttcctctagctcaac----------------tcagcggactgc +agctccaagcag------------------------tgtccgcagtctgtcaactcaatcaacc-------- +---------------------------------------tctgtgactggctcagctt-------------- +----------c-------------cctgggg------gggtcttct-------------------------a +caatctc--------------------------------------------tt------------------c +cagctc---------------------------------------taggacagcagattgggtgcaacagca +aag---ggctcttagcccatacatgc---atggagccctgcagacggcgtatgtcacaccgccgtcaagtag +ggcctcc---aatg------------------------------tgagct---ctgtctcaacagagcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +-------atc-aatg-----------------------------------------attaaatgtgatttt- +--------------gtt---ctcctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305578.1/1-7501 |Norovirus GII isolate KL136 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgtc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----cccttggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cccccaaggccacccactccagaactggtg-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaagatgaaccggtcgtt +cattatagca----------ccaa---agatggcataactgggctgcccgaacttacaacagtgaggcagcc +aaaagaggttgctacagcattcagcgtcccacccctcgaccagagagagaatagggacgctaaggagccatt +gaccggcaccatcttggagatgtgggatggcgagatctaccattatggcctatatgtggagcgagggctggt +gcttggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gagaccagtgtacacccccc---agtacctcattgctcctgacaccctcaggaaactgcacggggagttatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttggacttaaatgattcttggtt +gag---cagaaggatgatacagagaacaactggctttttcaggccttaccaagattggaataggaagcccct +ccccaccatggatgactccaagttgaagaaggtggccaacatacttttgtgtgccttgtcatcactattcac +tagacccatcaaggacataattgggaaactcaggcctctcaacatccttaacatcctggcttcttgtgattg +gtctttcgcaagtatagtggaatctctaattctcctagctgaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacctgaagatcttgctgtgga +acttgtaccggtagtaatgggggggataggattggtgttggggttcaccaaggaaaagattgggaagatgtt +atcatctgccgcctccaccctgagggcctgcaaagaccttggcgcctatgggctggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaggaggcaaacgagcttgcgatggtgagggctattgaggacgcagt +cctagacctcgaggctattgagaacaaccatatgacagctctactcaaagacaaagatagcctcgcgacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccactaagtccgcttcacctgatatagt +gggcacgatcaacgccctactggctagaattgccgctgctcgttcccttgtacacagggccaaggaagaact +gtccagcaggctaaggccagttgttgtgatgatatctggcaagcctggcatcgggaagacccatctggctag +agaattggcaaagaagatcgctataaccctctcaggagaccagagggtaggcctcatcccccgcaacggagt +cgaccactgggatgcttacaagggtgagagagtcgttctctgggacgactatggaatgagtaaccctgtcca +tgatgccctaagactccaagaacttgccgacacctgccccctgaccctaaactgtgacagaattgagaacaa +gggcaaggtttttgacagtgatgccataatcatcacaaccaacctggctaacccagctccacttgattatgt +caactttgaagcttg-ctccaggcgcattgacttcctcgtgtatgccgatgcacctgacgttgagaaggcga +agcgcgacttcccgggacaacctgacatgtggaagagcgcttacagtcccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacgggaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaaagactggatgaattcgaactacaaggac +ccaacctcacaactttcaactttgaccgtaataaaatacaggcttttaggcagcttgctgccgaaaacaaat +atggcctggtggacacaatgagagtgggtggacaactcaagagtgtcagaactataccagaactcaagcagg +ccctcaagaacatattaatcaaaaggtgccagatagtgtacggtggtagcacctacacacttgaatctgatg +gcaaagggagtgtgaaagtggaaaaagtgcaaaataccaacatccaaatcaacaacgagctagctggtgctc +tacaccacctccgatgcgccaggatcaggtattatgttaaatgtgttcaggaggctctttactccatcatcc +aaattgctggggccgcgtttgtaaccacgcgcattgtgaagcgcatga------acatacagaacttgtggt +caaggcctccagtaggagatgcggagga--------ggtcactagccaggatggttgcccaaagcccaaa-- +-gat----gatgagg---agttcgtcatctcgtctagtgacatcacgcctgaaggcaagaaaggaaagaaca +agactggccgcggtaagaaacacacagccttctcgagcaagggtcttagtgatgaggagtacgatgagtaca +aaagaattagggaagaaaggaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaagtggccatagccagggcaactgaggaagacttctgtgaggaagaagaagccaagatccgacaga +ggatatttaggccaacgaggaagcaacgcaaggaggagagggcttcccttggccttgtcaccggctcagaga +tcagaaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgatgaaagggttgttgact +ataatgagaaactcagttttgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttttgggtgtccc-ctagcctgttcattacatcaacccatgttataccccaaggcactcaggaattcttt +ggtgtacccatcaagcagattcaaattcacaaatcaggggagttttgccgcctgagattccctaaatcaatc +agaactgatgtaacaggcatgatcctagaagagggagccccagaaggaaccgtggtctcactactcatcaag +agaccaaccggtgagctcatgcccctggcagccagaatgggcacccatgcgactatgaagatccaaggtcgc +acggttgggggtcagatgggcatgttgctaacagggtccaatgctaaaagcatggatttgggcacgacgcct +ggtgactgtggctgcccctacatttacaagagaggcaatgactacgtggtcatcggcgtgcacacagccgcg +gctcgcggaggtaacaccgtcatctgtgcaacccagggtagtgaaggtgaggccacgctcgaaggcggtgat +aacaaaggtacctactgtggagctccaatactaggtcctggtagcgcacccaaactcagtaccaagactaag +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcctacttaggtggcaaggatccc +agggtgaagggtggaccttcactacaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagccgccaagaagaccattatcaatgtgttggagcaaacaatagat +cccccccaaaaatggtcattttcacaagcatgtgcgtcgcttgataaaaccacctccagcggccacccccac +cacatacggaagaacgattgctggaatggagagtcttttacaggaaaattggcagatcaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtctatacaggggccctcaaggatgagctggtcaag +actgacaagatttatgggcagatcaagaaaaggcttctttggggctcggacttggcaacaatgatccgttgt +gcgcgggcgtttggagggttgatggatgagcttaaggcccattgtgtaacacttcctgtcagggttggaatg +aacatgaatgaggatggacccataatcttcgaaaagcactccaggttctcatatcactatgatgcagactac +t-cgcgctgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-taaaattctcac +cagaaccacattt-ggcccaaattgttgcagaggatctcctagcccccagtgtgatggatgtaggtgatttc +aaaataacaattaacgagggtctgccctcgggagtaccctgcacatcacagtggaattccatcgcccactgg +ctcctcacactctgtgcactatctgaagtcacaaacctggctcctgacatcatacaagctaactccttgttc +tctttctatggtgatgatgaaattgtgagtactgacataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaaaccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggtttgacctttctgcggcggaccgtgacccgtgatccagctgggtggtttggcaagttggaccagagttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +cagaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccaacattttacaccaaaatc +agtaaattggtcatcacagagctgaaggaaggtggcatggatttttacgtgcccagacaggaacccatgttc +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgagcctgtggctggtgctgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcacagtttctccccgcaatgcccctgg +tgaagtgctattgaatctagaattgggtccagaattaaatccttatctggcacatttggcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgctagctgggaacgcgttcacagc---tggcaaattggt +cttcgctgctgtaccacctcattttccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgttaggactttggaacctgttttgttgccactccccgatgttagaaataatttcttccatta +taatcaaaaagatgat---cctaagatgagaattgtggctatgctttatactcccctcaggtccaatggttc +tggtgatgatgtgttcacagtctcttgcagggtgttgactagaccctcccctgattttgattttacatacct +ggtgccaccaacagtggaatccaaaacaaaaccattcactcttccaatccttacacttggggagctttccaa +ttctaga---tttccagtgtccatagaccagatgtacactagccccaatgaagtcatatctgtgcagtgcca +gaatggaaggtgcacactggatggggagctccaaggaacaacacagctccaagttagtggcatttgtgcatt +caaag-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcagga--------------------------------------------caatg---- +-------atcacc----------------------------------tatataac----------------- +----------------atcaccatcacaaacttgaatgggtcccctttcgatccctctgaggacatccccgc +ccccctgggtgtgcccgactttcagggaagagtctttggtgtcatcactcaaa---gagacaa--------- +-----ac-----agaatgccactgggcaaagcc--------agccggcaaacaggggacacgatgctgtagt +tcccacttacacagcccagtacaccccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---taaagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggtctca---------atgacac---------agaacatttcaatcagtgggtggttcctag +gtacgctggtgct-ttaaat------ctaaatacaaatcttgccccctctgttgctccagtgtttccagggg +agcgtttgctcttctttaggtcatacctccccc------ttaagggtggtta------tggaa--------- +--acccagctattgattgcctgctaccacaagagtgggtgcagcatttttatcaggaagcagccccctcaat +gagtgaggtagcccttgtcagatacatcaatccggacactggccgggcgctgtttgaggccaaactccacag +agctggtttcatgacagtctcgagtaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtgaaccaattttattctcttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------agtaatggctggagctttcgtagctggtctcgcgggggatgtgctcagcagtgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttttcccctactgatgcagccagaggcgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggactacatcctactctggcaggtt------------------- +-----------------------tacatcgaccgcccc---------------------------------g +gcaaggc----------------aggccgactt--------------------------------------- +------------------------------tcaacacactcaaaatcggccttcg---------------ag +tggctctt-----------ctgtg------------tactcttatgccactcaat----------------- +----------cttcaa-----gaccaactct------aaccacaaccac----------aggg--tcctcac +acggtac--------aacctcatccaattcgacccgtagcacaaacctttcccagtcgacggtctctagggc +tacctc---------------------------------------taggactagtgagtgggttagagatca +aaataggaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccccaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtg--------- +---a-a-aat-ttatct---ta---------------------------------agttaa---t-tgatt- +---------------ct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305579.1/1-7501 |Norovirus GII isolate KL137 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgta------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----cccttggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cccccaaggccacccactccagaactggtg-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaagatgaaccggtcgtt +cattatagtg----------ccaa---agatggcataactgggctgcccgaacttacaacagtgaggcagcc +agaagaggttgctacagcattcagcgtcccacccctcgaccagagagagaatagggacgctaaggagccatt +gaccggcaccatcttggagatgtgggatggcgagatctaccattatggcctatatgtggagcgagggctggt +gcttggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gagaccagtgtacacccccc---agtacctcatcgctcctgacaccctcaggaaactgcacggggagttatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttggacttaaatgattcttggtt +gag---cagaaggatgatacagagaacaactggctttttcaggccttaccaagattggaataggaagcccct +ccccaccatggatgactccaagttgaagaaggtggccaacatacttttgtgtgccttgtcatcactattcac +tagacccatcaaggacataattgggaaactcaggcctctcaacatccttaacatcctggcttcttgtgattg +gtctttcgcaagtatagtggaatctctaattctcctggctgaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacctgaagatcttgctgtgga +acttgtaccggtagtaatgggggggataggattggtgttggggttcaccaaggaaaagattgggaagatgct +atcatctgccgcctccaccctgagggcctgcaaagaccttggcgcctatgggctggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaggaggcaaacgagcttgcgatggtgagggctattgaggacgcagt +cctagatctcgaggctattgagaacaaccatatgacagctctactcaaagataaagatagcctcgcgacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccactaagtccgcttcacctgatatagt +gggcacgatcaacgccctactggctagaattgccgctgctcgttcccttgtacacagggccaaggaagaact +gtccagcagactaaggccagttgtcgtgatgatatctggcaaacctggcatcgggaagacccatctggctag +agaattggcaaagaagattgctacaaccctctcaggagaccagagggtaggcctcatcccccgcaacggagt +cgaccactgggatgcttacaagggtgagagagtcgttctctgggacgactatggaatgagtaaccctgtcca +cgatgccctaagactccaagaacttgctgacacctgccccctgaccctaaactgtgacagaattgagaacaa +gggcaaggtttttgacagtgatgccataatcatcacaaccaacctggctaacccagctccacttgattatgt +caactttgaagcttg-ctccagacgcattgatttcctcgtgtatgccgatgcacctgacgttgagaaggcga +agcgcgacttcccgggacaacctgacatgtggaagagcgcttacagtcccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacgggaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaaagactggatgaattcgaactacaaggac +ccaacctcacaactttcaactttgaccgtaataaaatacaggcttttaggcagcttgctgccgaaaacaaat +atggcttggtagacacaatgagagtgggtggacaactcaagagtgtcagaactataccagaactcaagcagg +ccctcaagaacatactaatcaaaaggtgccagatagtgtacggtggcagcacctacacacttgaatctgatg +gcaaagggagtgtgaaagtggaaaaagtgcaaaataccaacatccaaatcaacaacgagctagctggtgctc +tacaccacctccgatgcgccaggatcaggtattatgttaaatgtgttcaggaggctctttactccattatcc +aaattgctggggccgcgtttgtaaccacgcgcattgtgaagcgcatga------acatacagaacttgtggt +caaggcctccagtaggagatgcggagga--------ggtcactagccaggatggttgcccaaagcccaaa-- +-gat----gatgatg---agttcgttatctcgtctagtgacatcacgcctgaaggcaagaaaggaaagaaca +agactggccgcggtaagaaacacacagccttctcgagcaagggtctcagtgatgaggagtacgatgagtaca +aaagaattagggaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaagtggccatagccagggcaactgaggaagacttctgtgaggaagaagaagccaagatccgacaga +ggatatttaggccaacgaggaagcaacgcaaggaggagagggcttcccttggccttgtcaccggctcagaga +tcagaaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgatgaaagggttgttgact +ataatgagaaactcagtttcgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttttgggtgtccc-ctagcctgttcattacatcaacccatgttataccccaaggcactcaggaattcttt +ggtgtacccatcaagcagattcaaattcacaaatcaggggagttctgccgcctgagattccctaaatcaatc +agaactgatgtaacaggcatgatcctagaagagggagccccagaaggaaccgtggtctcactactcatcaag +agaccaaccggtgagctcatgcccctggcagccagaatgggcacccatgcgactatgaagatccaaggtcgc +acggttgggggtcagatgggcatgttgctaacagggtccaatgctaaaagcatggatttgggcacgacgcct +ggtgactgtggctgcccctacatttataagagaggcaatgactacgtggtcatcggcgtgcacacagccgcg +gctcgcggaggtaacactgtcatctgtgcaacccagggtagtgaaggtgaggccacgctcgaaggcggtgat +aacaaaggtacctactgtggagctccaatattgggtcctggtaacgcacccaaactcagtaccaagactaag +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcctacttaggtggcaaggatccc +agggtgaagggtggaccttcactacaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagccgccaagaagaccattatcaatgtgttggagcaaacaatagat +cccccccaaaaatggtcattttcacaagcatgtgcgtcgcttgataaaaccacctccagcggccacccccac +cacatacggaagaacgattgctggaatggagagtcttttacaggaaaattggcagatcaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtctatacaggggccctcaaggatgagctggtcaag +actgacaagatttatgggcagatcaagaaaaggcttctttggggctcggacttggcaacaatgatccgttgt +gcgcgggcgtttggagggttgatggatgagcttaaggcccattgtgtaacacttcctgtcagggttggaatg +aacatgaatgaggatggacccataatctttgaaaagcactccaggttctcataccactatgatgcagactac +t-cacgatgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-taaaattctcac +cagaaccacattt-ggcccaaattgttgcagaggatctcctagcccccagtgtgatggatgtaggtgatttc +aaaataacaattaacgagggtctgccctcgggagtaccctgcacatcacagtggaattccatcgcccactgg +ctcctcacactctgtgcactatctgaagtcacaaacctggctcctgacatcgtacaagctaactccttgttc +tctttctatggtgatgatgaaattgtgagcactgacataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaaaccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggtttgacctttctgcggcggaccgtgacccgtgatccagctgggtggtttggcaagttggaccagagttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +cagaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccaacattttacaccaaaatc +agtaaattggtcatcacagagctgaaggaaggtggcatggatttttacgtgcccagacaggaacccatgttc +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggcgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgagcctgtggctggtgctgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcacagtttctccccgcaatgcccctgg +tgaagtgctattgaatctagaattgggtccagaattaaatccttatctggcacatttggcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgctagctgggaacgcgttcacagc---tggcaaattggt +cttcgctgctgtaccacctcattttccggttgaaaaccttagcccacagcaaattaccatgttcccccatgt +gattatagatgttaggactttggaacctgttttgttgccactccccgatgttagaaataatttctttcatta +taatcaaaaagatgat---cctaagatgagaattgtggctatgctttatactcccctcaggtccaatggttc +tggtgatgatgtgtttacagtctcttgcagggtgttgactagaccctcccctgattttgattttacatacct +ggtgccaccaacagtggaatccaaaacaaaaccattcactcttccaattcttacacttggggagctttccaa +ttctaga---tttccagtgtccatagatcagatgtacactagccccaatgaagtcatatctgtgcagtgcca +gaatggaaggtgcacactggatggggagctccaaggaacaacacagctccaagttagtggcatttgtgcatt +caaag-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcagga--------------------------------------------caatg---- +-------atcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctctgaggacatccccgc +ccccctgggtgtgcccgactttcagggaagagtctttggtgtcatcactcaaa---gagacaa--------- +-----ac-----agaatgccgctggacaaagcc--------agccggcaaacaggggacacgatgctgtagt +tcccacttacacagcccagtacaccccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---taaagtcaaccaaccagtaa---------------------------aattcaccccag- +--------tcggtctca---------atgatac---------agaacatttcaatcagtgggtggttcctag +gtacgctggtgct-ttaaat------ctaaatacaaatcttgccccctctgttgctccagtgtttccagggg +agcgtttgctcttctttagatcatacctccccc------ttaggggtggtta------tggaa--------- +--acccagctattgattgcctgctaccacaagagtgggtgcagcatttttatcaggaagcagccccctcaat +gagtgaggtagcccttgtcagatacatcaatccggacactggccgggcgctgtttgaggccaaactccacag +agctggtttcatgacagtctcgagtaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtgaaccaattttattctcttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------agtaatggctggagctttcgtagctggtctcgcgggggatgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaaccagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttttcccctactgatgcagccagaggcgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggactacatcctactctggcaggtt------------------- +-----------------------cacatcgaccgcccc---------------------------------g +gcaaggc----------------aggccgactt--------------------------------------- +------------------------------tcaacacactcaaaatcggccttcg---------------ag +tggctctt-----------ctgtg------------tcctcttataccactcaat----------------- +----------cttcaa-----gaccaactct------aaccacaaccac----------aggg--tcctcac +acggtac--------aacctcatccaattcgacccgtagcacaaacctttcccagtcgacggtctctagggc +tacctc---------------------------------------taggactagtgagtgggttagagatca +aaataggaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccccaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtg--------- +---a-a-aac-ttatct---ta---------------------------------agttaa---t-tgatt- +---------------ct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305580.1/1-7519 |Norovirus GII isolate C15 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaaaaccagcacaaacagt +gaaattcac----aatcaagatgcaaaccctacatcaaac------------------ctctttgccaacat +gactgttggcttgaagaggg----ccctgggggcgaggccaaaacaatccgctcccagggtctcctccccca +acagggagggaaagctcgataccactcccagagccccctctcccaacaagggaggaaa--aatcaacatccc +cccaataccac--------------------ccccaccgcccaacgg------tgaggacatagtcatcaaa +tacaccaaac----------aaga---tgatgtagttgaaggggtacccaccgtcgccacggtggacgtttc +tcttacacacaacaccgcctacagtgttccccccttggaccagagggaaaaggttgatgcgaaggaacccct +gacaggttcgatacttgaaatgtgggatggggaaatctaccattatgggctatatgtggagaagggcttggt +ccttggtgtgcataaacccccagccgccataagctttgcacgcatagaactcactcccctttctctatactg +gagggtagtctataccccac---cttacctaatagccccagaaaccctcaggaaactccatggggagtcgtt +tccatacacagcctttgacaataactgctattccttctgctgttgggtcctggatctgaacgattcttggct +caa---taggaagtttgtgtcaaggaccacgggtttctacaggccctaccaagagtggaacagaaaacccct +accaactatggatgagggaaagcttaagaaggtggccaatgtgctcctatgtggcctctctgggctctttac +taggcccatcaaggacctcataggaaaattgaggccgctgaacatactcaacatcatcaccaattgtgattg +gaccttccccggagttgtggaggctctcatactacttgcagaactcttt---ggagtcttttggacaccacc +agacatttccacctttatagcatcactgctgggtgattatgaaatgcaaggccctgaggatatcgcggttga +ggtcgtgccggtgatcctcggtggcataggcatggtgcttggattcaccaaagaaaggatcggccgactgtt +gagctctgccgcgtcttcgctcagggcatgcagggagattggtaactacgggatagaagtggtgaaactggt +gatgaagtggtttttccccaccaaggatgagacaaacgagatggatatggtgagggcgatagaggatgctgt +gctcgattttgaagccatacagaacaatcatatgacagcattactcaaagacaaaaacagtctggcaacctt +cctcagggagttagatatggaagaggaaaaggcgcggaagctgtcaacgaaatctgcgtccccagatattat +tggcaccataaatgcccttctagccaggattgccgccgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggtcgacccgggataggaaaaacacacttggctcg +tgacctggccaagaagatggcagcgaccctctcaggtgatcagagggtggggctcgtaccgaggaatggtgt +cgaccattgggatgcatataaaggagagaggattgtgctttgggacgactacggcatgagcaaccctgtgac +cgacgcactgcggctccaggagttggccgacacatgccccttgacactcaattgtgatagaatagaaaacaa +ggggaaagtgtttgacagtgacaccataatcatcaccaccaatctagccaaccctgctcctctagactatgt +taattttgaagcttg-ctcccgccgtatcgatttccttgtctacgcagactccccttcggttgacaaagcga +agagagacttccctggtcaaccagacatgtggaaagatgccttcaaatcagacttttcacatataaagcttc +agttggcgccacaagggggctttgataagaacggaaacaccccccacgggaaaggtgtcatgaaaacgctga +ccacacactcccttattgcccgcgccacgggcctcctgcacgagagactggatgagttcgacctgcagggac +ctgagttgcctgtgtacaactttgaccacaacagggtggctgctttcaggagacttgcagctgacaacaagt +atggccttatggaaaccatgaaagtgggcaacaaactgaagggtgtcaagaatctggaacaactcaaggatg +ctctaaaggacataagtatcagaccttgcaggatagtctacaactcgatggcttacgacctcgactcgaacg +ggtcagggagagtcaacgtcaaaaaggctgtagaccacaaggtccaaaccaacaacgaactcaactccgcgc +tcaacaatctgcgtggcgccagagtgagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaaggatgacacggagactga------acatcagcagtatttggg +ccaggccaga------------aaaaca--------aatggaggccgctgaggaacccccagccccccca-- +--------actgagg---aatggactataataccagcaaatgcagcccaggaaggtaagaagggtaagaaca +agagtggtagaggcaagaaacacaccgccttctccagcaaaggcctcagtgatgaagagtatgatgagtaca +aaagaatcagagaagagagacagggaaaatactctatagaagagtaccttcaggacagggaccggtac---t +atgaagaactagccatagccaaagcaacagaagagaacttctgtgaggaggaagaaataaaaattagacaga +gggtcttccgcccgaccaggaaacagcgtaaggaagagagagcgactctgggcctggttacgggcagtgaaa +taaggaagaggaacccagatgacttcaagccaaagggaaaactgtgggctgatgatgaccgcagtgtaaact +acaatgagaaaatagactttgaagcgccccccagcctctggtcccgaatagtgaactttggatcaggttggg +gcttctgggtgtctt-ccaatttgttcatcacatcaacacatgtcatccccccaaacatgaccgaggctttt +ggtgtaccaataggtcaaatacaagtgcacaggagtggggagttctgcaaaatgaggttccctaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagcccccgagggaacagtggtgaccattctgatcaag +agaacaactggtgaactcatgccactggcagcccggatgggcactcacgccaccatgaaaatacaggggaag +atgcttggaggccaaatgggcatgcttctcacagggtccaatgccaagaacatggatcttggcaccatcccc +ggggactgtggctgtccttatgtgtacaagagaggcaatgattgggtggtcataggggtgcacaccgcagct +gccagaggcggcaacacggtgatttgcgccacccagggaccagatggtgaggccacgcttgaggggggagac +aatcacgggacttactgtgctgcaccaatacttggaccagggagtgcaccaaagctcagcaccaagacgaag +ttctggaggtcatccaacgccccactcccacctggtacttatgaacccgcctacctaggcggaaaggaccca +agggtcaagggagggccatcactgcagcaagtcatgagggaccaactcaagcccttcaccgccccccgaggg +aagccaccacgaccggcgatcctggaggctgctaaagagaccatctgcaatgtgcttgaacaaaccattgac +ccacccctaaaatggtcttacgcccaagcctgtgcctcattggataagacaacatcaagtggccaccctcat +catatgaaaaagaatgacaactggaacggggagtcctttactggcgtgctagctgaccaggcctccaaggca +aacctcatgtatgaacaggggaaacacatgcagcctgtgtacactgctgccctcaaggatgagctcgttaag +accagcaaaatttatgagagcattaagaaaaggctcctatggggctcagatctgggcacaatggttcgctgt +gctagagcttttggtggtcttatggatgagatgaaagcaaattgtgtgaacttaccaattagagttggcatg +aacatgaacgaggatgggcccattatttttgaaaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggactcaacccaacagaggcacatcttgggggctgcccttgaaataatgg-ttagattctcag +ctgaacctgaatt-ggcacaaattgtgtctgaggacctcttagcccccagcgtggtggacgttggtgacttt +aaaattgccataaatgagggtttgccctctggggtgccgtgcacatcacaatggaactcaatctctcattgg +ctaataacattatgtgccatatcagaagtctcagggttgtcgccagatgtggtgcaaacaaactcctgtttc +tctttctacggggatgatgagatagtcagcactgacatcaagttagatcccatgaaactaaccaacaagttg +aaggagtacgggttgattccaacaagaccagacaagacagaggggccactcataattaaagaaaaccttgag +ggtttgactttcctgaggagggacgtgtgccgggacccagctggttggtacggaaaacttgatcaatcctca +atcatgagacaattgttctggaccaagggacccaatcatgaagaccccaatgaaacaatgattccacactct +cagaggcccatacaactaatgtcactgctaggggaggcagcactgcatggaccaactttctacaagaaagtc +agcaaattggttatcactgagctcaaagagggtgggatggatttctatgtgccaagacaggaacctatgttc +aggtggatgagattctctgatctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgccgccggcctcgtgccagaaagtagtaatga +ggcaatggctctggaacccgtggtgggggcatctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctcgaaactcccctgg +agaggtattggtcaatttggagctaggtccagaactgaacccttatctggcacacttagctatgatgtacaa +tggttatgcgggtggtatggaagtgcaagtgttgctcgcagggaacgcgttcactgc---tggcaagatcat +ctttgctgccgtgccaccttactttccagtggaaaatcttagcccttctcaaataacaatgttcccacatgt +gattattgatgttagaaccctggaacctgtattactcccaatgcctgatgttagaagtaccttgttccattt +taatcaaaaggatgag---cctaagatgagacttgttgctatgctttatacccctcttcgttctaatggttc +tggtgacgatgttttcaccgtctcgtgtaggatccttactaggccctcccctgaatttgatttcacatattt +agtaccaccaacagtagaatcaaaaaccaaaccattcacactacctgtactaacactgggagaattgtctaa +ctctaga---tttcccctctctattgatgaaatggttaccagccccaatgagtccatagttgtccagccaca +gaatggtagggttacgctggatggggagctgttgggcacaactcaattacaagcatgcaacatttgctctat +aaggg-----------------------------------------ggaaggtaacag-------------- +------------ggcaggttcc--------------------------------------------ta---- +----atgaac-------------------------------------aacatatg----------------- +----------tggaacctagagatcacaaacctaaatgggacacaatttgaccccacagatgatgtcccagc +cccccttggtgtgcccgactttgcaggtgaggtttttggtgtactcagccaga---gaaatagagg---tga +gagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgacaagtacacccccaaactgggcttagtgcaaattggaa---------cttggaacac +caatgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggttgcca---atggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctaaca------ctaaacatgaatttagcccctgctgtggctccgctctttcctggag +agcgtctccttttcttccgctcttatgttccat------taaaaggtggatt------tggta--------- +--accctgctatagattgtctggtgcctcaagagtgggttcaacacttctatcaggagtctgccccctctct +gggggatgtggccttggtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +gggtggattcctgactgtgtcaagcactagcacagggcctgttgtggtgccagccaatggctatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +atttc---------agtaatggcaggagcttttatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcaacaaaattctttcaatcatgataaagaaatgttaagt +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctggctgctgga +ggtttctccccaactgatgcagccagaggagctgttaacgcacccatgacccaagcactagattggaatggc +actaggtactgggcccctgactcaa------------tgaagaccaccagctactctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgaattcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctccgtgtcttct--------- +----------ggtaga-------actaattt------gacaaattccactcaatcaact---------gttg +ttagtgcttcctcagtgc--------------------------------cac------------------c +ttctaggggcccctctgctccttctactctgtcaagggccacagccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---agggtgcccttcaaacagcatttgtcacccccccctctagccg +ggcatct---agta------------------------------atggaa---cagtctcaactgtgccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgctt +accttcgtaagaagggggagtcaca--------agcttag--t-----------gaaaagataattaa---- +-----------tgat------------------------------------taataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305581.1/1-7528 |Norovirus GII isolate S9d nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcactaacaccaccccttctaacaaagaggaggc------tggtgcattctccaacat +taaagttggaattaagaaaa----tgctgggtgccgtgcccaaaaacccc-------------aaggcaccc +agcggtga----------------ccagcactgtcccacggttaagattggacctaaaactttagtgatccc +acc-----------------------------agagcccccaaacgg------tgaagat------gttgtg +cagtttgacg----------cgaagtcggaaactgtgcgtgggattcccgatctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacggtccctccactgagtgaaagggaacatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgagttctaccactactccatctatgtcagcggtggcaaagc +cctgggggtccacaaacccccagcagctataagcctcgcgacaatagagctcacccccatatctctctactg +gcggcctgtctacaccccaa---attatttggtctgtccagacacattgaagggccttgctggtgaaaagtt +tccctacacggccttcagtaataactgctacaacttctgttgctgggtgcttgagctcaatgacacatggct +ttg---cagaagaagcatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaacgcaatcctctgtgcgcttggctcactgttttc +aaaaccaatcaaagaccttttgggaaaactcaaaccactaaacctactacacctactcgcgtcctgtgactg +gacattcgcaggcatagtggagacggtcatcttaatggcggaactcttc---gatgtcttttggactccgcc +agatgtctccaactttatagcctctctgataggtgattttgagctacaagggcctgaggacttggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggtcctcggtttcactgctgagaagatagggcgcatgtt +gtcatctgccgcatcaactctgcgggcgtgcaaagatctggggaactacgccctcgacatactaaaactagt +cacgaagtggttcttcccaaagaaagaagagaaggctgagatggagactttgagggcgattgaggacgccgt +attggacatggaggcgatagggaacaaccacctcacgacgctcctcaaggacaaggacagtctcactgcatt +tatgaagactctagacctggaggaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggtaccatcaatgccatattggccagaatagcagctgccagatcccttctacacaaggccaaggaagagat +gtttagcaggattagaccagtggttgtcatgatctcaggcaggcctggtattggcaaaacccatatggcgag +gcatctggctaagagtatagccaacaccatgagtggagaccagagagttgggctcgtccctcgcaacggggt +tgaccactgggacgcctacagaggagagagagtggtcctgtgggacgactatggtatgggaaaccctgtcaa +agatgccttaacattgcaagaactggccgacacctgtccagtcactctaaattgtgacaggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattacgt +aaattttgaggcttg-ctccagaagaattgacttccttgtttatgcagaatccccagaaatagaaaaggtca +aaagagacttccctggccaacctgatatgtggaaagaccacttcaagccggacttctcacacataaaactga +ccttagccccccagggcgggtttgacaagaatggtaacaccccacatggtaagggtaccatgcggtccctaa +cccaagggtccctgactgcaagagtcgcaggtctcgttcatgagaggagagatgaattccagctacaagggg +atgacctccaaacatacaactttgacaccaacagggtctctgcgttcagaaaactggccgcggataacaagt +atggaatcatggagacaatgagagtgggagcggcactcaagaacgtcaaaactttggaagaccttaaagttg +ccttgaaagatgtgaaattcaatgaatgtgagatcatttacaggaactccaagtaccgagtctcatccaatg +gcaagggcgctgtctctgttgacaaaatcgaagacctcacatctcagactgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcaagggccagatactacgtcagctgcttccaggaccttgtctacaccctcatac +aggttgctggggcttcattcgttgtca---------------atagga------tctcgaagaggttctgct +gggaaaggtgggttaagccgaccgagac-------------tcaggaaacgaatgagcccga-----gaagg +aaactgcccaaggta---gatgggagattgaacccaaggatgcagaaccagaaggtaaaaagggcaaaaaca +agaaaggaagaggcaagaaacacacagccttctccagtaagggcttgagtgatgaagagtatgatgaattca +agaggatcagggaagaaagaaacgggaagtattccattgaggaatatctgcaggaccgggatcgttac---t +acgaagaagtagcggtcgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccaacaaggaaacagaggaaagaagagaggggggtgcttggcctggttactggctcggaca +tcagaaagaggagaccagatgacttccagccaaagggtaacttgtgggcagatgacaccagaagtgtggact +ataacgaaaggcttgactttgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gtttttgggtctcat-ccaacctccttatcacaacaacacatgtcctacctaagggcatcaaggaactcttt +ggagttgatgtcaaacaaatccaaattcataaatctggagagttttgcaggttcagattcccgagaccaatc +aggccagacgtctcagggctcgtgttggaagagggcgcaccagagggtaccgtctgctctgtactcgtgaag +agatcaacaggtgagatgatccctctggcagtaaggatgggtacacatgcatccatgaaaatccagggcagg +actgtcggtggccaaatggggatgcttctcacaggagcgaacgcaaagaacatggatcttggcaccggtcca +ggtgactgcggttgtccttacatctacaaacgcggtaatgacataattgtggcaggtgtccacaccgcagca +gcccgagggggcaacactgtcatctgcgccacccaagggcaggatggggaggcagtccttgaagggaatgag +aatcttggcacgtactgcggtgccccaattttaggtcctggcaaagcgcccaagctcagcacgaaaaccaaa +ttttggcgctcgtcgccggatgccctgccacctggcacatatgagcctgcttacctgggaggcaaggacccc +agagtggagaaaggaccctccctacagcaagtcatgagagaccagttaaaacccttcacggagcccagaggc +aaaccaccaaggcccacagtcctagaagaggctaaaaagacagtgatgaatgtcctagaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgtgcctccctggacaagaccacttccagtggtagccctcac +cacgtcaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagatcaagcgtccaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcactcaaagatgagctcgtcaag +actgataaaatctataagaagataaagaagaggctcctttgggggtcggatctgggcacaatggtcagatgt +gccagagcttttggtggcctcatggacagcatgaaagcaagctgcataaccctcccgtgcagggtaggtatg +aacatgaatgaggacggacccatcatctttgacaagcactcaaaatacaggtatcactatgatgctgactac +t-ctaggtgggattcaactcaacaaaggagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaact-ggcacaagtggttgcagaagaccttctagcacccagccaactagacgttggtgacttt +gtcatctcagtccaggaaggtttaccatcaggagtcccatgcacatcacaatggaactcgatagcgcattgg +attttaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgatattaaccttgacccttcaaaactgacacagaaactt +agggagtatggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctacgtaggtcgattgcacgggacccagctgggtggtttggaaaactggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgagagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcatgggccccagttttacaagaaggtc +agcaagatggtcatcagtgaaattaagagtggtggtctggagttttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtctcaccaaggaattcgcctgg +tgagatgcttttaaatcttgagttgggcccagaacttaatccctatttaagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccctgtagaaaacatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgatataaggaacaggttcttccatta +caaccaagagagcacc---ccccggatgaggcttatagccatgctttatacacctctgagggc---caattc +tggtgaggacgtgttcactgtgtcctgcagggttttgactcgtcccgctccagattttgagttcacattttt +agtgccaccaactgttgaatcaaagacaaaacctttcactttgcctattctgacccttggtgagttgtctaa +ttctcgc---tttccggctgctatagatatgctttatactgatcctaatgaatcaatagttgtacaacccca +aaatggtaggtgcactcttgatggcaccttgcaaggcacaacacaattggtccccacacaaatttgtgcctt +tagag-----------------------------------------gcactctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacaatacgacccaacggatgatatacctgc +agtcctgggggctattgacttcaaaggtacagtttttggagtggccagtcaaa---gggatgtctctgggca +-----ac---aagaacagggccactatgccacc--------cga-----------gcccatgaagcacacat +tgatacaactgacccaaagtatgcacccaaattaggcacaatccttat---ta---------aatctgaatc +taatgattt---tactacaaatcagcccatta---------------------------ggttcactccgg- +--------tgggcatgggtgaca---------------------acaattggagacagtgggagctacctga +ttattctggtaga-ttaact------ttgaacatgaacctcgctcccgctgtttctccgtctttccctggtg +aacgaattcttttcttcaggtctatagtaccat------cagccggaggctt------cggat--------- +--ccggttatatagactgtctcatacctcaggaatgggtacagcacttctaccaggaagcagcgccttcgca +atccgctgttgccctggttagatatgtcaaccccgacactgggcgtaacatctttgaggccaagttacatag +agaagggttcctcaccgtggctaactctgggaacaatcctattgtggtcccccccaatggttattttagatt +tgaagcttgggttaatcagttttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcaggattagcaggtgatgtcgtgtcgaacggcatc +ggatcccttatcaatgcagg---tgctaatgcagttaatcaaaaagtggagtatgactttaacaagcaa--- +------------------------------cttcagatggcatcattcaagcacgacaaggagatgctacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgccgatgctgctaaaggggctgttaatgccccaatgacgaagattctggactggaatggc +acaagatattgggcaccaaacagtatgaaaaccacaagctattcagg-acagttttctagcagccctgttca +ta-----------gatcctttgctaccccccagcatactgctcc---------------------------a +ccaa-------------------agggcaagttgcaa----------------------------------- +----------------------------------------------------------------------gg +tgattctg-----------ctagtgtgtacagttctccctctaccatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------gtccacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgactgggtcagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtctcaaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacgcataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-ctttctct---t--ctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305582.1/1-7446 |Norovirus GII isolate T055 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------------------aagtcttcaagtgacg---------------gcttgtttgctaacat +gactgtcacttttaagaagg----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaaacaa +atatctaa---------------accaccaagaccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------tgaagatgagccaaaggtg +gtgtacaggg----------tggg---agaaggtgtatctgggctgcctgacttaacaaccgtcacgcagcc +tgacgcacaaaacacagcctatagtgttcccccactcagtcaaagagaggtgggtgacgcgaaggaaccact +acctgggtccatcttggaaatgtgggacggcgagatctaccactatgggctgtacgtggagcgtggtcatat +actcggggtacacaaaccacccgctgcaataagcctcgctaaaattgagttaacaccattgtctctctactg +gagggtggtttacacccccc---agtatttgatagctccagacactttgaagaacttgagtggagagtcatt +tccctacacggcttttgataacaactgttatgctttttgctgctgggtcctggatctcaacgattcttggct +tag---tagaaggatgatccaaagaacgaccggtttctttagaccatatcaggattggaacagaaagcccct +gccaaccatggatgaacctaaaatcaagaaggtcgcgaatgccgtcctatgtgccctctcttcactcttcac +taggcctattaaggacattattggaaagctcaaaccaatgaacatcctcaatatactggctacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgccgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttgctcggcgactacgagatgcaaggtcccgaagacctggccgtgga +actcgtgcccgtagtaatgggagggataggtctggtgctgggattcaccaaggaaaagatcggcaagatgct +ctcatcggctgcatccacactcagagcctgcaaagacctaggggcttacggattggaaatactcaaattagt +tatgaaatggttcttccctaagaaagaggaggctaatgagttagctatagtgagagccattgaagatgctgt +cttagacctggaggcaatagaaaacaaccacttgaccactctcctcaaggataaggacagcctggccacata +catgaggactcttgacttagaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacattgt +aggcacaataaactcattgttggcaagaattgcagctgctaggtcactagtccacaaggcaaaggaggaatt +gtcaagcagacagaggcctgtcgtcgtaatgatgtctggcagaccaggcatagggaaaacccacctcgccag +agagatagctaagaaggttgcatcaacgttggcgggtgatcaaagaattgggttggtgcccaggaacggtgt +ggaccactgggacgcctacaaaggagaaagggtggtgctatgggatgactatggcatgagcaaccctataca +ggatgctctaagactccaagagttggccgacacctgccctctaacactaaattgtgacagaattgaaaacaa +gggaaaagtgtttgacagcgatgtcataatcataacaaccaaccttgcaaacccagcaccactggattatgt +caactttgaggcctg-ctccagacgcatagacttcttagtgtatgcagatgcaccagacattgaaaaggcca +agcgtgacttccctggccaaccagacatgtggaaagatcattacagaccagacttctcacacatcaagctcc +agctagcaccgcagggtggttttgacaagaatggtaacaccccacatggcaaaggtgtgatgaaatccctga +cggtcggatcattgatcgccagggcttctggattactccatgagagaatggatgaatttgaactccaaggcc +ctaacctaccaactttcaactttgaccgcaacaaagtcaccgcctttaggcaattggcagctgaaaacaaat +atggtatgatggacacactgagggttggcaaccaactgaaaagtgttaaaaccatggatgaacttaaacaag +ccatcagaaacatcaccatcaaaaagtgccagatagtgtacaatggatgcacctacaccatggagtctgacg +ggcgtggcaaagtgtcagttgacaaagtgcaaaatgcaacagttcaaaccaacaacgaacttgtgggagcgc +tacaccacctaaggtctgcaagaataagatactatgtcaagtgcttccaggaggcaatctactccttgttgc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaagtctctggt +caaagccacccgttgaagaca---atga--------gtcagaagacaaagaggggtgccccaagcccaga-- +-gat----gaggatg---agttcactgttgactccaaggacatcaaggtggaaggaaagaaaggcaagaaca +agtctggcagaggaaagaaacacacggctttctccagtaagggcctcagtgatgaagagtacgatgagtata +aaagaatcagagaagaaaggcatggcaaatactcaatagaggaatacctccaagatagggacaggtac---t +atgaagaactcgccatcgctaaggccactgaggaggacttctgtgaagaggaggaagctaaaatccgccaga +gaatcttccgccccaccaggaaacagcggaaggaggaaagggccacactcggactcgtcacggggtcagaaa +tcagaaagaggaacccagatgacttcaaaccaaaggggaaactgtgggctgacgacaacaggagtgtggatt +acaatgagagaatagattttgaggcacctccaagcatttggtcaagaatagtcaactttggttcaggttggg +ggttttgggtctccc-caagtctcttcataacttcaacccacgtgataccgaaaggaatcacggaggctttt +ggtgtacccatcagtcaaatacaaatccacaagtcaggggaattctgccgcttgcggtttccaaaaccaatc +aggacagatgtgagtgggatgattttagaagagggtgcccctgagggaaccgttgcaaccattcttgtcaag +cgaccaacaggggaactaatgcccctagcggccagaatggggacccatgccgcaatgaagatccaagggaga +atggtgggtggtcagatgggtatgttgcttaccggttcaaacgccaaaagcatggaccttggcacaacacca +ggtgattgtggatgcccttacatatacaaaagaggcaatgacttcgtagtcatcggcgtgcacaccgcagca +gcacgtggaggcaacacagtcatatgtgccacacaggggagcgaaggtgaggccactcttgaaggtggtgac +aacaggggcacctactgcggagctcccatcctggggcctggtaacgcaccaaaactgagcaccaaaacaaaa +ttttggaggtcttccaacgcaccactcccaccaggcacctatgaaccagcatacctaggtgggagagaccca +cgtgtgaagggaggtccgtccttgcaacaggtcatgagagaccagctcaagccttttactgaacccagagga +aaaccaccaaacccaagtgttttagaatcagcaaagaaaaccatcattaatgtcttggaacaaaccattgat +cccccccagaaatggacctacgcccaagcatgtgcatctcttgacaaaacaacctccagcggtcatccacat +cacgtccgtaagaatgactactggagtggtgagtccttcataggcaagctagcagaccaggcatcaaaggca +aatctcatgtacgaggagggtaaacacatgacaccagtgtacaccgcagctctcaaggatgagctggtgaaa +actgacaaaatttatggtaagatcaagaaaagactcttatggggttccgacctctccaccatgattcggtgt +gccagggcattcggcggtctcatggatgagctcaaagcacattgcatcactctccctgtcagagttggcatg +aatatgaatgaagatggacccataatatttgagaaacattccagatacagataccactatgatgcagactat +t-cccgttgggattccacacagcaacgggcagtgctagcagcagcacttgaaatcatgg-tgagattttctg +cagaaccacaatt-ggcacagatagtggctgaggacctgctgtcgccgagcgtggttgacgtgggcgatttt +aagattacaatcaatgagggtctgccatctggcgtgccttgcacgtctcaatggaattccatctcccactgg +ttgctcaccttatgtgccctgtctgaagtgacaggactgggccctgacatcatacaagctaactccatgtat +tctttctatggtgatgatgaaattgtaagcactgacataaaattggacccagaaaagctaactacaaaactt +aaggaatatggcctcaaacccactcgccctgacaaaactgaggggccactggtgatcagtgaagacttgaac +gggttaacgttcctccgtcggacagtgacccgtgatccagcaggttggttcggaaagttggaccaaagttcc +atcctcaggcagttatattggacaagaggacccaaccatgaagatcctagtgaaaccatgataccacacgca +caaagacccgtgcagctcatggcattgttaggagaatcctccctacatggaccctcattttacagcaaagtt +agcaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgctacgggcctcgtcccagagatcaaccacga +gacccttcctctagaaccagtggcaggcgcagctattgccgcacccgtcactggtcaaaataacataattga +tccctggataagaacaaattttgtacaagcacccaatggggagtttacggtttcacctaggaactctcctgg +agaaatcctcctaaatttggaattaggccctgatttgaatccttatttggcacatctgtctagaatgtacaa +tgggtatgctggtggtgtggaagtccaagtcctcctagcggggaacgcgttcactgc---aggaaagattct +tttcgctgccgtgccaccaaatttcccagttgaattcttgagtcctgcccaaatcactatgctaccacattt +gattgttgatgtcagaacccttgagcccattatgataccactccctgatgttagaaacaccttcttccatta +taataatcagcctgcc---caacgcatgcgcctagtggccatgttatacacccctctgaggtccaatggttc +tggtgatgatgttttcactgtttcttgcagagttttgactagacccaccccagattttgagtttacatattt +ggtccccccttcggtggagtctaaaactaaacccttttccctgcccattttaactatctctgagctgactaa +ttcaaga---tttcctgcacctatagattcactgttcacggcccaaaacaatgccctcaatgtccaatgcca +gaatggccggtgcacactggatggtgagctacagggaaccactcaactgttgccatcaggtatatgtgcctt +cagag-----------------------------------------gcaggttgacagcag----------- +-----------atgtaaatc------------a---------------------------------gc---- +-------aacacg----------------------------------atgaca------------------- +--------gatggcacatgcaactgacaaaccttaatggaactccctttgatccaacagaggatgtgccagc +ccctctaggtaccccagactttacaggtctcctctacggtgtggccagccaga---gaaac----------- +------------------agtgacaacaccacc--------aga-----------gcacacgaggtcgtgat +ttccacaactagctcacaattcgtgcctaaattggggtcaatcaactttggg------------agtacaag +tactgattt---tcagttgcagcaacccacca---------------------------gatttacaccgg- +--------ttggaatca---aaattgaagacg---------gacatgaatttaatcaatggaccctacccag +gtattcaggccat-ttgacc------cttaacatgaaccttgccccacctattgctccaaatttccctggtg +aacagttgctattctttagatcaaatgtccctt------gtgccggtggcat------caatg--------- +--ctggcatcattgactgcctgttgcctcaagagtggatacagcatttctatcaggaatctgccccctctca +atcagacgtggccctaatcaggtatgtcaaccctgacacagggcgcacgctctttgaggcaaagctccacag +atcaggttacatcactgttgcccactcaggtgactatccacttgttgtcccctctaatggatactttagatt +tgattcttgggtgaaccagttttactcacttgcccccatgggaacagggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcaccaacgcagtc +ggctcactggcaaacgctgg---ggccaatgccataacccaaaagatagattttgagaacaacaagcag--- +------------------------------ctccaatctgcctctttccagcatgacaaagacatgctccaa +gcacaggtagctgccaccaaacaattgcaggctgacatgatcgccatcaaacaggggatactgaccgctggc +ggcttctcccctactgatgcggcgagaggagcagtgggtgcacccatgaccaaggtccttgattggtccggc +actcgctattgggcaccaaattccacaaaaacaaccagctattcgggacagttcacatcaacg--------- +cc--------------cgtacacatgcc------tgtt---------------------------------a +aa----c----------------agcccacccctgt---tagaaa--------------------------- +------------------------------gacccagcccccttcctcttcttctggt------------ag +t--gtcta-----------tagtc------------tt-------tcaacacagagtaccactttg---t-- +----------ctgtac-----cttcttcc---agttcttctgctccttctgcttcaacgcaattaacaaaat +tgagttc--------------------------------------agcttcct------------------c +tatgga---------------------------------------taggacagcaaattgggttaatcaaca +gag---aagccttagcccctacatga---gcggtgctctcaacatctctcacgtgacacctccgtcgagcag +ggcttca---agtt------------------------------cgggga---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------agtttag--t-----------gaaaagaatc-------- +-------aat-tgattt---taaa---------------------------------------ttagattt- +------aaa----ttgg---att------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305583.1/1-7506 |Norovirus GII isolate T091 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcacggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggagttggtc-------aagaggatacc +tcc-----------------------------cccccctcctaatgg------ggaggatgaaccagtggtc +tcttatagtg----------tcag---agatggtgtctccgggctgcctgagctctccactgtcaggcagcc +agaagagaccaacacagcatttagtgtccctccacttaaccagagagagaacagggatgccaaagagccact +gactggaacaatcctggagatgtgggatggggagatctaccattatggcttgtatgtggaacggggcttagt +gcttggcgtgcacaaaccaccagcagccattagcctcgccaaggttgaactgacaccactctctttgttttg +gagacctgtgtacactcccc---agtacctcatctccccagacactcttaggagactgcatggggaactgtt +cccttacacagcctttgacaacaattgctatgccttctgttgctgggttctagaactgaatgactcatggct +gag---taggaggatgatacagaggacaactggtttctttagaccttaccaagactggaacaggaagcccct +tcccaccatggatgattccaaactaaagaaggtggccaacatattcctatgtgccttgtcttcattgttcac +cagaccaatcaaggacataatagggaagctaagaccccttaacatccttaacatcttggcttcatgtgattg +gacctttgcaggcatagtggaatccctaatccttttagcagagctcttt---ggagttttctggacgccccc +agacgtgtctgcgatgattgcccccttgctgggtgactacgagctacaggggcctgaggacctcgcggcaga +aatagtgccagtagtgatggggggaataggtttggtgctaggattcaccaaagaaaagattgggaagatgtt +gtcatctgctgcatccacattgagggcttgtaaagaccttggtgcatacggtctggagatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaggcaagcgagttggccatggttaggtccattgaggatgcagt +gttggacctcgaagcaattgaaaacaaccacttgaccaccttgcttaaggacaaggacagcctggcgactta +catgaaaactctcgaccttgaggaagagaaagccaggaaactctcaactaagtctgcttcacctgatatcgt +gggtacaatcaacgctctcctggcgaggattgcagctgcccgttccctagtgcatcgggcgaaggaagagct +ttccagcaggccgagacctgttgttgtgatgatatcaggaaaaccagggatagggaagacccacctcgccag +agagctggccaaaaagatcgcaaccaccctcacgggggaccagagagtgggccttatcccacgcaatggcgt +cgaccactgggatgcatacaagggagagagggtcgtcctttgggatgactacggaatgagcaaccccatcca +cgacgctctcaggttgcaggagcttgctgacacctgccccttaacactaaattgtgatagaattgaaaacaa +aggtaaagtctttgacagtgatgctataatcatcaccactaacttggccaacccagcaccactggactatgt +caattttgaggcgtg-ctcaaggcgcattgatttcctcgtgtacgccgaagcccctgatgtcgagaaggcga +agcgcgacttcccgggccaacctgacatgtggaagaatgctttcagctctgacttctctcacataaagctga +tgctggctccacagggtggttttgacaagaatggcaacaccccacatgggaagggcgtcatgaagaccctca +ctatcggttccctcatcgcccgcgcttcagggctccttcatgagaggctggatgagtacgagctgcaaggcc +cagcccttacaaccttcaactttgaccgaaacaaagtgctcgccttcaggcagctggctgctgaaaacaagt +atgggttgatggacacaatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagagcatctcaattaagaggtgccagatagtgtatagtggcagcacctatacacttgagtctgatg +gcaagggcagtgtaaaggttgacagagttcagagcgctactgtgcagaccaacaatgagctagccggcgccc +tacaccacctcaggtgtgccaggattaggtactacgtcaagtgtgttcaggaggccctgtactccatcatcc +aaattgcaggggccgcatttgtcaccacacgcattgtcaagcgcatga------acatacaggacctttggt +ctaagccacagctggaggacacagaaga--------agctgccggtaaagaagggtgcccaaaacccaaa-- +-gat----tatgagg---agtttgttgtctcgtctgacgacatcaaggccgagggcaagaaagggaagaaca +agaccggtcgcggcaagaaacacacagccttctcgagtaaaggtctcagtgatgaggagtacgatgagtaca +aaagaatcagggaggaaagaaacggcaagtactctatagaggagtatctccaggatagagacaagtat---t +atgaggaggttgccatcgccagagcgactgaggaggatttctgcgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaggaagagagagcttctctcggcctagtcacgggctccgaaa +tcaggaaaagaaacccggatgacttcaaacctaagggaaagctatgggccgatgacgacagaagtgtcgact +acaatgagaagctcaattttgaagccccaccaagtatctggtcaaggatagtcaactttggctcaggttggg +gtttctgggtttctc-ctagtctgttcataacatcaactcatgtcataccccagggcacacaggagttcttt +ggagtacccatcaaacagatccaaatacacaagtcaggcgagttctgccgtttgaggttcccaaagccaatt +agaactgatgtaacgggtatgatcttggaggagggtgcccccgaaggaaccgtggtcacgctactcatcaag +agaccaactggtgaactcatgcccttagcagccagaatgggcactcatgcaactatgaaaatccaaggtcgc +actgttggaggtcaaatgggtatgctcctaacagggtctaatgctaagagtatggacctgggcaccacaccc +ggtgactgtggttgcccttacatctataagagggggaatgactacgtggtcatcggggttcacacggctgct +gctcgtggaggaaacaccgtcatatgcgccactcagggaaatgaaggtgaggccacacttgaaggtggtgac +aacaaaggcacctactgtggtgccccgatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttttggagatcatccacagcaccactcccgcctggcacctatgaaccagcttacctcggcggtaaggacccc +agagttaagggtggtccatcactacaacaggtcatgagggatcagttgaaaccattcacagaaccacgaggc +aaacaaccaaagccaagtgtgctggaagctgccaagagaaccatcattaatgtccttgaacaaacaatagac +ccacctcaaaaatggtcattcgcgcaagcttgcgcgtctcttgacaaaaccacctccagtggtcacccacac +catatacggaagaatgagtgctggaatggggagtcctttacaggtaagttggcggatcaggcttcaaaggcc +aacttgatgtttgaggaggggaagaacatgactccaatttatacaggtgccctcaaggatgagttagtcaaa +actgacaagatatatggtaagatcaagaagaggctgctttggggatcggacctggcaaccatgatccggtgc +gcccgggcgttcggaggcctgatggatgagctcaaggcccactgtgtcacacttcccgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtacagataccattatgatgcagattac +t-ctcggtgggactcaacacaacagagagctgtgctagctgcagccctggagatcatgg-ttaaattctccc +cagagccacactt-ggcccagatagttgcagaagacctcttatcccctagtgtgatggacgtaggtgatttc +aagatatcaatcaacgagggccttccctccggggtaccttgcacctcacaatggaactccatcgctcactgg +ctcctcacactctgtgcactctctgaagtcacggacctctcccctgacatcgtccaggccaattctcttttc +tccttctatggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaattgacagcaaaattg +aaagaatacgggctgaaaccaactcgccctgacaagactgagggacccctgatcatttctgaggatctaaat +ggtttgactttcttgcggaggactgtgacccgtgacccagctggttggtttggcaaactggaacagagttca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacactcc +caaaggcccacacaactgatgtccctgctgggtgaggctgcgttacacggcccagcgttctatagcaaaatc +agcaaactggtcatcacagagttgaaagaaggtggcatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggagctgctattgcagccccagtggcaggtcaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccccggtggggagtttacagtgtctcctagaaatgccccagg +tgaaatattatggagtatgcctttaagccctgaattgaacccctacctttcacatttatctaggatgtataa +tgggtatgcaggtggttttgaggtgcaggtgatcctcgcggggaatgcgttcaccgc---ggggaagatcat +attcgcagcaatccccccaaattttcccactgatggcctgagtcctagtcaggtcaccatgtttccgcatat +aattgtggatgttagacaattggaacctgtgctgatacccttacccgatgttaggaacaatttttatcatta +taatcaggcaaatgat---tccaccttgaaattgatagctatgctgtacacaccacttagagctaataatgc +tggagatgatgtttttactgtttcttgccgtgtattaacaaggccatcccctgattttgatttcatattctt +ggtccctcccacagtcgaatcaagaacgaaacctttcactgtccctatactgactgttgatgaaatgaccaa +ttcgagg---ttccctacccccctggagaaattgcatacgggcccaaacaactctatagttgtccaacctca +gaatggaaggtgcacaattgatggcgtcctcttgggcactacgcagttgtccaccgtcaacatctgcaactt +tagag-----------------------------------------gtagcaccacacgtgcag-------- +------gtcagtcacacg------------------------------------------------c----- +------------------------------------------------ctacacg----------------- +----------------atgaatttggtctctcaaaattggaacaattatgacccaacagaggagattccagc +ccctttggggacaccagactttgtcgggaagatcgtgggcatgctctcgcaga------------------- +-----cc-----accagagagaacagttcaacg--------cga-----------gcccacaaggccacggt +gagcactggagatgcccacttcacgccaaagtcaggcagtgtcttgttcacca---------ctgacactga +c---gacct---ccaaaatggccaaaatacaa---------------------------gattcaccccag- +--------tcggagttgcacaagatggtgaacc---ccaccagaatgagccacaacaatggcgactcccaaa +ttattctggcaca-cccggc------cacaatgtgcacctggcaccccctgtcgcacccactttcccaggtg +aacagttgctcttctttaggtccaccatgccag------gttgtggtggtta------tccta--------- +--acatggatttggattgcctgctccctcaagagtgggtgcgccatttctaccaagaagccgcaccagcaca +atctgatgtggctctgctgaggtttgtgaatccagacacgggaagggtgttatttgagtgcaagctccacaa +ggcaggatacatcacagtctctcacactggtccctatgacttggtcattccacctaatggttactttagatt +tgattcctgggttaatcagttttatgcacttgcccccatgggaactggaacggggcgcaga---------cg +tgctt---------tataatggctggggctttctttgctggattagcgtctgacgtactcggcaccggcctt +ggttctctaatcggcgccgg---ggctggcgccatcaatcagaaagtggaatatgagaataacagaaaattg +cagcaggcttccttccaatttagtagtgatttacagcaagcttctttccaacatgataaggatatgctccaa +gctcagattaaggcaacccaaaaattgcaacatgatcttatgagagtcaagcaggcagtgctactagaggga +ggcttttcccccaccgacgctgcacgtggtgcaatcaacgcacctatgacaaaggtcttggactggagcggg +actcgctactgggctcctggggctagggttacaacatctaacgcaggccaattctctttctca--------- +ca---------------------acccatccgggagcc---------------------------------a +tctggca----------------gga---------------c------------------------------ +------------------------------cgcccccgcccgaagtcccgcc------------------aa +tcgagctt-----------ctagt------------gtatctgcaccctctt-------------------- +----------ctacac-----tttctaatca------aacaacctcaac----------gag--------ac +ttggcac--------ttcagcaggttctggtgccagtgtctcgggctcttcat------------------c +ggcctc---------------------------------------gagggttaggagctgggtagagggcca +aaacaggagcctttcgcccttcatgg---acggggcgctccacacttcatttgtcacacccccatcaagtaa +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggtgctt------------tcaacacgcacagacagccgctcttcgccc +acgtgcgcagacaaggggagtcacg--------agtttaaagt-----------gaaaagat---------- +-----------tact-----taa---aa------ttttc----------t-tt----t--------tcttaa +g-att--a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305584.1/1-7494 |Norovirus GII isolate T045 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgtc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cctccaaggccacccaccccagaattggtg-------aaaaagatccc +acc-----------------------------tcccccgcctaacgg------ggaggacgaaccggtcgtt +cactatagtg----------ctaa---agatggtataactgggctgcccgaacttacaacagtgaggcagcc +agaagaggccgctacagcattcagcgtcccacccctcgaccagagagagaacagggacgctaaagaaccatt +gaccggcaccatcttggagatgtgggatggcgagatctaccattatggcctatatgtggagcgagggctggt +gcttggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gaggccagtgtacactcctc---agtacctcatcgctcctgacaccctcaggagactgcacggggagtcatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttagaactaaacgactcttggtt +gag---cagaaggatgatacaaagaacaactggctttttcagaccttaccaggaatggaataggaagcccct +ccctaccatggatgattccaagttgaagaaggtggccaacatagtcttgtgtgccttgtcatcactattcac +tagacccatcaaggacataattgggaaactcaggcctctcaacattcttaacatcctggcttcttgtgattg +gactttcgcaggtatagtggagtctctaattctcctagctgaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacccgaagatcttgctgtgga +acttgtaccaatagtgatgggggggataggattggtgttggggttcaccaaggaaagaattgggaagatgct +atcatctgctgcttccaccctgagggcctgcaaagaccttggcgcttatggactggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaagaggcaaacgagcttgcgatggtgagggctattgaggacgcagt +cctagatctcgaggctattgagaacaaccatatgacagctctactcaaagacaaagatagcctcgcgacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccaccaagtccgcttcacctgatatagt +gggcacgatcaacgccctactggctagaatcgccgctgctcgttcccttgtgcacagggccaaggaagaact +gtccagcaggctaaggccagttgttgtgatgatatctggtaagccaggcatcgggaagacccatctggctag +agaattggcaaagaagatcgctacaaccctatcaggagaccagagggtaggcctcatcccccgcaacggggt +cgatcactgggatgcttacaagggtgagagagtcgtcctctgggacgattatgggatgagtaaccctgtcca +tgatgccctaagactccaagaacttgctgacacctgccccttgaccctaaactgtgacaggattgagaataa +gggcaaggtctttgacagtgatgccataatcatcacaaccaacctggccaacccagctccacttgattatgt +caactttgaagcttg-ctccaggcgcattgacttccttgtgtatgccgatgcacctgacgttgagaaagcaa +agcgcgacttcccgggacaacctgacatgtggaagagcgcttacagctccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacggaaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaaagattggatgagttcgagctacaaggac +ccaacctcacaactttcaattttgaccgtaataaaatacaggctttcaggcagcttgccgctgaaaacaaat +atggcctggtggacacaatgagagtgggtggacaactcaagggtgtcagaactatgccagaactcaagcagg +ccctcaagaacatatcaatcaaaaggtgccagatagtgtatggtggcagcacctatacacttgaatctgatg +gcaaagggaatgtgaaagtggaaaaagtacaaaataccaatgtccaaatcaacaacgagctaactggtgctt +tacaccatctccggtgcgccaggatcaggtactatgttaaatgtgttcaggaggctctttattccatcatcc +aaattgctggggccgcttttgtaaccacgcgcattgtgaagcgcatga------acatacaaaacttgtggt +caaggccaccagtaggagatgcggagga--------ggttgctggccaggatagttgcccaaagcccaaa-- +-ggt----gatgagg---agttcgtcatctcgtctagtgacatcacacctgaaggcaagaaaggaaagaaca +agactggccgcggcaagaaacacacagccttctcgagcaagggtcttagtgatgaggaatatgatgagtaca +aaagaatcagggaagaaaggaacggtaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaagaagtggccatagccagggcaactgaggaagacttctgtgaggaagaagaagccaaaatccgacaga +ggatatttaggccaacgaggaaacaacgcaaggaggagagggcttcccttggtcttgtcactggctcagaga +tcaggaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgatgaaagggtcgtcgact +ataatgagaaactcagttttgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttctgggtgtccc-ccagcctgtttattacatcaacccatgtcataccccaaggcactcaggaattcttt +ggtgtacccatcaagcagattcaaattcacaaatcaggggagttttgtcgcctgagattccctaaatcaatc +agaactgatgtaacaggcatgattctagaagagggggccccagaaggaaccgtggtctcattactcatcaag +agaccaaccggtgagctcatgcctctggcagccagaatgggcacccatgcgactatgaagatccaaggtcgc +acggttggaggtcagatgggtatgttgctaacagggtccaatgctaagagcatggatttgggtacaacacct +ggtgactgtggctgcccctacatttacaagagaggcaatgactacgtagtcatcggcgtgcacacagccgct +gctcgcggaggtaacactgtcatctgtgcaacccagggtagtgaaggtgaggccacgctcgaaggcggtgac +aacaaaggtacctactgtggagctccaatactaggccctggtaacgcacccaagctcagcaccaagaccaaa +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcctacttaggtggtaaggacccc +agggtgaaaggtggaccttcactgcaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagccgccaagaagaccatcattaatgtgttggaacaaacaatagat +cccccccaaaaatggtcattttcacaagcatgtgcgtcgcttgataaaaccacctccagcggccacccctac +cacatacggaagaacgattgttggaatggggagtctttcacaggaaaattagcagatcaagcatcaaaagct +aacttaatgtatgaggaaggaaagaacatgaccccagtctacacaggggctctcaaggatgaactggtcaag +actgacaagatctatggacagatcaagaaaaggcttctttggggctcggacctggcaacgatggttcgttgt +gctcgggcgtttggagggttgatggatgagcttaaggcccattgtgtaacacttcctgtcagggttgggatg +aacatgaatgaggatggacccataatctttgaaagacactccaggttctcataccactatgatgcagactac +t-cacgctgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-ttaaattctcac +cagaaccacactt-ggcccaaattgttgcagaggaccttctagcccctagtgtgatggatgtaggtgatttc +aaaataacaattaatgagggtctaccctcgggagtaccctgcacatcgcagtggaattccatcgcccactgg +cttctcacactctgtgcactatctgaagttacaaacctggctcccgacatcacacaagctaactccttgttc +tctttctatggtgatgatgaaattgtaagcactgacataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaaaccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggcttgacctttctgcggaggaccgtaacccgcgatccagctgggtggtttggcaagttagaccagggttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +cagaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccaacattttacaccaaaatc +agtaaattggtcattacagaactgaaggaaggtggcatggatttttacgtgcccaggcaggaacccatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgagcccgtggctggcgctgccttagcggctccagtcactggccaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcactgtttccccacgcaatgcccctgg +tgaagtgctactaaatctagaactgggtccagaactgaacccttatctggcacacttggcaaggatgtacaa +cgggtatgccggtggaatggaggtgcaggtcatgctagctgggaatgcgtttacggc---tggaaagttggt +cttcgccgctgttccacctcatttcccggttgaaaaccttagcccgcagcaaattaccatgtttccccatgt +gattatagatgttaggactttagaacctgttttactaccacttcctgatgttaggaataacttcttccacta +caaccagaaagatgac---cctaagatgagaattgtggccatgctttacaccccccttagatcgaatggttc +tggtgatgatgtgttcacggtctcttgtagagtgttgactaggccttcccctgattttgatttcacatactt +agtgccaccaacagtggagtctaaaacaaaaccattcactatcccaatcctcacactcggggagctttccaa +ttctaga---tttccagtgtccatagatcagatgttcactagccccaatgaagtcatatctgtgcagtgtca +gaatggaaggtgtacactagacggggagcttcaaggaacaacgcaactccaagtcagtggtatctgtgcatt +tagag-----------------------------------------gagaagtgactgcccac--------- +-----------ttgcatga--------------------------------------------taatg---- +-------accatc----------------------------------tttataat----------------- +----------------gtcaccataacaaatttaaacgggtctccttttgacccctctgaggacatccctgc +tcccctgggtgtgcccgactttcaagggagggtttttggtgtcatcagtcaga---gagacaa--------- +-----ct-----acaatgccagtggacataacc--------agcctgcaaacaggggacacgatgctgtggt +tccaacctacacagctcaatacaccccaaaattgggtcaaatccagattggca---------cgtggcagac +tgatgacct---aacagtcaatcagcctgtta---------------------------aattcaccccag- +--------ttggcctta---------atgatat---------ggagcaatttaatcaatgggtggtccctag +gtatgctggtgca-ctaaat------ttaaacacaaaccttgccccttcagttgcacccgttttcccaggag +aacggctgctattctttagatcataccttcctc------tcaaaggtggtta------tggca--------- +--acccagccattgactgtctgctgccacaggagtggatacaacacttctatcaagaagctgccccctcaat +gagtgaggtggcccttgttaggtacatcaacccagacactggtcgggcgctgtttgaggccaagctccatag +agctggcttcatgacagtctcgagtaacaccagtgctccagtagtcgtgcctgccaacgggtacttcagatt +tgactcctgggtaaatcaattttactctctcgcccccatgggaactggcaatgggcgcaga---------ag +gatcc---------aataatggctggtgccttcatagctggtcttgcaggggacgtgctcagcaatgggctc +ggctcactaatcaatgcagg---tgctaatgcaataaatcagagagcagagtttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaagcaaccaagcagctgcaggcagacatgatggctataaagcagggggtgttgaccgctggc +ggcttctctcctgctgatgcagccagaggcgctgtaaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaggctccatgaggacaacttcttactccggaaggtt------------------- +-----------------------tacatcagccgctcc---------------------------------a +acaaggc----------------aggctgactt--------------------------------------- +------------------------------tcaacacactcagggccgaccttcg---------------ag +tggttctt-----------ccgtt------------tcctcctactccacacaat----------------- +----------cctcaa-----gaccaacctt------aaccacaactac----------aggg--tcctcac +atagcac--------aacatcatccaatttgacccgcagcacaaatcttccc---tcgactacttctagagc +aacctc---------------------------------------taggactagtgaatgggttagagaaca +aaatagaaatttggaaccctacatgc---atggtgccttacaaacagcctttgtcacaccaccatctagcag +ggcatcc---gac---------------------------------ggga---cggtctcaaccgttcccaa +gggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag--t-----------gaaaaggta--------- +---a-a-att-tta-------a---------------------------------aataat---c-ttatt- +---------------ct---gcctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305585.1/1-7517 |Norovirus GII isolate 40 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gggtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcagacaacc +ggaagaagccaatacggccttcagtgtccccccactcaaccagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtctcat +acttggtgtgcacaaaccaccagccgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactcttaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaatctaaggcctcttaacatcctcaacatcttggcctcatgtgactg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgttgattgcccccttactcggtgattacgagttacagggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgataggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaagagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccattcacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccatctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aacatgaatgaggatggccccatcattttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggcagccctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtcgcagaagaccttctatctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccatgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctattgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +caatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaacaatgc +cggggatgatgtcttcacagtctcctgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaattcacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcacccaggacggtgataa---ccatcaaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccggggg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacactggcccgcacgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactcaaaaattgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tacacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaaaaatttgtcaccttttatga---gggaggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------ttttt- +---------------------tctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305586.1/1-7500 |Norovirus GII isolate 57 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggtatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaaaccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggacgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagatataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctgacattcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctttcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaacaa---ccatcaaaatgaaccccaacaatgggcgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttagacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tg---------------------------------------g +tacacctt-----------ctagt------------acttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttggggatca +aaacagaaatttatcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305587.1/1-7500 |Norovirus GII isolate 60 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgactg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggtatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaaaccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggtaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagatataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctgacattcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctttcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaacaa---ccatcaaaatgaaccccaacaatgggcgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttagacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tg---------------------------------------g +tacacctt-----------ctagt------------acttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttatcaccttttacga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305588.1/1-7500 |Norovirus GII isolate 65 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcataaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtttttgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaaaccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaagatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagacataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctacctttctcatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaagg---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctctcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgttatccaggacggtaacaa---ccatcaaaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cacaatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tg---------------------------------------g +tacacctt-----------ctagt------------acttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttatcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305589.1/1-7521 |Norovirus GII isolate 75 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactgatc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcag---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaaccagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatgtattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcatacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagaccttaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcaaaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgctcaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtctagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgatagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggtaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtagggacccc +agagtcaaggatggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgattcggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtattggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaatttctatcatta +caatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------ca---- +-------gtcatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgagagaggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactggaagtgtccactttactccaaagctgggcagtgtccaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccacaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacaccggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctgggttggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttccttccaacatgataaagagatgctccaa +gcacagattgaggccactaaaaaattgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgacgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tgcacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305590.1/1-7521 |Norovirus GII isolate 170 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaaccagagggaaaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcatacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctatcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaata +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggaatccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgat +ccacccgagaaatggtcattcacgcaagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgcgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaggcattccagatacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatattatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +caatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ctcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---tcatcaaaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccactttcccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggccactaagaaattgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tacacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtgccagtgtctcgagtctcccgt------------------t +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-c-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305591.1/1-7506 |Norovirus GII isolate 101-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +cct-----------------------------acccccacccaacgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtaggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatacacggcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cctggacttagaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggtatagggaagacccacctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttgcacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaatcgctggtgcggcctttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacccgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---atctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcagctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacaggtac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgccccaccagaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtaagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgcctcttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagttatatgtgccacacaaggaagcgaaggtgaagccactcttgagggaggtgac +aacaagggcacctattgtggagcccccattttaggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctgggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaatcaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaagaaggcaaacacatgccaccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgcatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgagtttctctg +ctgaaccacagtt-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccctgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcgccccgacaaaaccgaagggccgctggtaatcagtgaagacttgaat +ggtttgacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggatcaaaattcc +atcctcaggcagctatactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactgctgggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaacttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaagtggtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaacttccctattgataatctgagcgcagcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagagtatcgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgaaccaaatatgtgcttt +caggg-----------------------------------------gaacacttactagat----------- +-----------caacaaacagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacagcaacccccaggctatt +taaccatcattggcacatacaattggataatctaaatggaaccccctacgaccctgcagaggacataccagc +tcctttgggtacaccagacttccggggcaaagtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cctagaaat-----aaccactgaatc +tgatgactt---tgacccaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagattttcagcagtggtccttacctga +ctattccggtcag-tttact------cataacatgaacttagccccagctgtcgcccccaattttcctggtg +aacagcttcttttcttccgatcacagctgccat------cttctggtgggcg------gtcta--------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaagaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatgggtattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgtg +ggatctttggttaatgcagg---ggctagtgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttggattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +ttagagc----------------gaaccaggcccccaaa--------------------------------- +----------------------------------------------ctcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcactagcttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +ttagctc--------------------------------------gttgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcacagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------aat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305592.1/1-7506 |Norovirus GII isolate 101-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +cct-----------------------------acccccacccaacgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtaggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatacacggcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtgatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cctggacttagaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccacctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttgcacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaatcgctggtgcggcctttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacccgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---atctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcagctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacaggtac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgccccaccagaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtaagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgcctcttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagttatatgtgccacacaaggaagcgaaggtgaagccactcttgagggaggtgac +aacaagggcacctattgtggagcccccattttaggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctgggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaatcaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaagaaggcaaacacatgccaccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgcatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagtt-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccctgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcgccccgacaaaaccgaagggccgctggtaatcagtgaagacttgaat +ggtttgacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggatcaaaattcc +atcctcaggcagctatactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactgctgggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaacttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaagtggtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaacttccctattgataatctgagcgcagcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagagtatcgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgaaccaaatatgtgcttt +caggg-----------------------------------------gaacacttactagat----------- +-----------caacaaacagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacagcaacccccaggctatt +taaccatcattggcacatacaattggataatctaaatggaaccccctacgaccctgcagaggacataccagc +tcctttgggtacaccagacttccggggcaaagtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cctagaaat-----aaccactgaatc +tgatgactt---tgacccaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagattttcagcaatggtccttacctga +ctattccggtcag-tttact------cataacatgaacttagccccagctgtcgcccccaattttcctggtg +aacagcttcttttcttccgatcacagctgccat------cttctggtgggcg------gtcta--------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaagaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatgggtattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggttggagcctttatagcaggattggctggtgacatgctcacaaacactgtg +ggatctttggttaatgcagg---ggctagtgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttggattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +ttagagc----------------gaaccaggcccccaaa--------------------------------- +----------------------------------------------ctcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcactagcttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +ttagctc--------------------------------------gttgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcacagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------aat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305593.1/1-7491 |Norovirus GII isolate 110-11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataacacaa +aaacaaaa---------------acccccacgaccgcccaccccagaactgatc-------aaaaagatccc +gcc-----------------------------ccccccgcccaacgg------ggaggacgagttggtggtc +tcctatagcg----------taaa---agatggcgtttccggtttgcctgagctctccaccgtcagccagcc +gggcgagaccaacacggcgtttagtgttcccccactcaaccaaagggaaaacagagacgctaaggagccact +aactggcactattctggaaatgtgggatggggagatctaccattatggcctgtatgtggaacggggtttggt +gcttggggtacacaaaccaccagcagctatcagctttgccaaggttgagctgacaccattgtccctgtactg +gagaccagtgtacacccctc---agtaccttatatccccggacaccctcagaaaactacacggggagtcatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcctggacctgaacgactcttggct +tag---caggaggatgatacagagaacaactggctttttcaggccttaccaggactggaacagaaaacccct +ccccaccatggatgattccaaattaaagaaggtggccaatgtagtcctgtgtgccttgtcatcattgttcac +cagacctattaaggacataattggaaaactaagacccctaaacatcctcaacatattggcttcctgcgattg +gacctttgcaggtatagtagaatccctaatcctcctggcagaactcttt---ggagtattttggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactatgaactacaggggcctgaggaccttgctgtaga +actcgtaccagtggtaatgggggggataggtttggttctaggtttcaccaaagagaaaattggcaagatgct +atcatctgccgcgtccactctcagggcttgtaaagatcttggagcttacgggttagaaatcttgaagctggt +catgaagtggtttttcccgaagaaagacgaggtgaacgaactcgcaatggtgagatccatcgaagacgcagt +attggacctcgaagcgattgaaaacaaccacatgaccgctctgctcaaagacaaggatagtttggcaaccta +tatgaacactctagatcttgaagaggagaaagctagaagactgtccaccaagtctgcctcccctgacatcgt +gggtacaataaacgccctgctggcacggatcgcagccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaaaccaggaatagggaagactcaccttgctag +agacctagcaaagaaaatcgcagccaccctcacaggagatcagagggtgggtctcatcccacgaaacggcgt +tgatcactgggacgcatataaaggtgaaagagttgtcctctgggatgactatgggatgagcaaccccatcca +tgacgccctcagattacaagaactcgccgacacgtgccctctgacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgatgctataatcatcacaactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcaaggcgtatcgacttccttgtgttcgctgatgctcctgatgttgagaaggcaa +agcgtgacttccctggacaacctgacatgtggaaagatgcctttagacctgacttctcacacataaagctga +tgctggccccccaagggggttttgacaagaatggcaacaccccacacgggaaaggcgtcatgaagaccctca +catctggctctctcattgcacgcgcatcagggctcctccatgagagattggatgaatacgagctgcagggcc +caacacccacaaccttcaactttgaccagaataaggtttttgctttcaggcaactcgctgctgagaacaagt +atgggttaatggacaccatgagagtgggaagccagctcaagggtgtcaaaaccatgtcagagcttaaacagg +cactcaagaacatcgcaatcaaaaagtgtcaaatagtctatggaggttcaacatattcacttgaatctgatg +gcaaaggcaatgtaaaggtcgagagagtgcagagcgcaactgtgcagaccaacaacgaactgacaggtgctc +tgcaccatctcagatgcgccaggatcaggtattacgttaagtgtgtccaggaggccctgtactctatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaacctttggt +ccaggccacaagtggaggacacagaaga--------gaccatcaacaaagatgggtgcccaaagcccaaa-- +-gat----gatgagg---agtttgtcgtatcgtctgaggacataaaagttgagggcaagaagggaaagaaca +agtctggtcgtggtaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaatata +aaagaattagggaagaaagaaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaggtggccatagctagggctactgaggaggacttctgtgaggaagaggaggccaagatccgacaga +ggatcttcagaccaacgaggaaacaacgcaaagaggagagggcctctcttggactggtcacaggctcagaaa +tcagaaagagaaacccagatgacttcaaacctaagggaaaattgtgggctgatgacgacaggagtgttgact +acaatgagaaactcagttttgaagctcccccaagtatctggtcaagaatagtcaactttggttcaggttggg +gcttctgggtctcac-caagcctgttcataacatccactcatgttatacctcagggagcacaggagttcttc +ggggtttccattaggcagattcaaatccacaaatcaggtgaattctgtcgactaagattcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaggagggggcccctgaaggaacagtggccacactgctcataaag +agaccaactggggaactcatgccattggcggctaggatgggcacccacgcaaccatgaagatccaaggccgc +accgtcgggggtcaaatggggatgcttttgacaggatccaatgccaagagcatggacttgggcaccacacca +ggtgactgtggatgtccatacatctacaagagaggaaatgactatgtagtcattggggtccacacagccgct +gctcgcggaggaaacactgtcatctgtgcaacccaaggaagcgaaggtgaggccgtacttgagggtggtgat +aacaagggcacctattgcggtgccccgatcctaggtccagggagcgccccaaagctcagcaccaagaccaaa +ttctggaggtcatcaacagcaccactcccacccggcacatacgaaccagcctacctaggaggtaaggatccc +agggtcaagggtggcccctcattacagcaagtcatgagagaccaattgaaaccattcacagaacccagggga +aagccaccaaacccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgaacaaacaatagac +ccaccccaaaaatggtcattttcacaggcatgtgcatcccttgataaaaccacctccagtggtcatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacaggaaaattggcagatcaagcttcaaaagct +aacctgatgtatgaggaggggaagaatatgaccccagtctacacaggtgcactcaaggatgagctagtcaaa +actgataaaatatatggaaaaattaagaagagacttctctggggatcagacctggcaaccatgatccgttgt +gctcgagcattcggaggactaatggatgaactcaaggcccactgtgtcacactccctattagagttgggatg +aacatgaatgaagatggccccattatctttgagaaacattctaggtaccactaccattatgatgcagactac +t-cccggtgggattcgacacaacagagagctgtgctagctgcagccctagaaatcatgg-taaaattctctt +cagaaccacatct-agcccaggtagtcgcagaagaccttttgtctcccagtgtgatggacgtgggcgatttc +aagatatcaattactgaagggcttccttctggggtgccttgcacttcacagtggaattccatcgcccattgg +ctcctgacactctgtgcactctctgaggtaacaaatttgtcccctgacatcatccaagcaaattccctcttc +tccttctatggtgatgatgaaatcgtgagcacagatatcaaattagacccgggaaagcttacagccaagtta +atagagtatgggctaaaaccaactcgccctgacaagactgaagggcctctggtcatctctgaggacctagat +ggtctgaccttcttgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcaaagttca +atacttagacaaatgtattggaccaggggccctaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacagctaatgtcactgctaggtgaagcagcactgcatggaccatcattctacagcaggatc +agtaagctggtcattgcagagttgaaggaaggtggcatggacttttacgtgcctagacaggagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcacttgagccagtggttggggcttcaatagcggctccactcactggtcaaaataatattataga +cccctggattagattaaattttgtacaggcccccaatggagagttcactgtctcaccacggaactcacctgg +agaagtcttgctaaacttagaattaggccctgaactaaatccttatttgtcacatctatctagaatgtataa +tggttatgcaggaggagtggaggtgcaagtgttgctggccgggaatgcgttcacagc---tggaaaattggt +gtttgctgcagtccctccccactttccattagaaaatattagccctggacaaataactatgttcccccatgt +gattgttgatgttagaactttagaaccagttttgttgcccctcccagatgttaggaataatttctttcatta +taatcagcaaaatgaa---cccagaatgagacttgtggctatgctctacacccccctcaggtccaatggttc +tggtgatgatgtcttcactgtctcctgcagggtgctcactcgcccctctcctgattttgattttaattatct +ggttccccccacagttgaatcaaagacaaaaccattcacattgcctatcctaactatgggtgagctgaccaa +ttctagg---tttcctgtacctatagatgaactttacaccagccccaatgagaacctggttgtgcaacccca +gaatggtaggtgtacgctagatggggagttgcaggggacaacccagcttcttcccacggcagtctgctcgtt +ccgtg-----------------------------------------gc------------------------ +---------------------------------------------cgcataaacacaaaggtggccggg--- +---gaagataatg----------------------------------tttggaac----------------- +----------------atgcaagtcactaatatcaatggaacaccctttgacccaactgaggatgtcccagc +accattgggcacccccgacttttcagggaaaatcttcggcgtactcagccaaa---gaaa------------ +-----ta------------caaacaatgcctgc--------aga-----------gcccatgatgcagtggt +ggcaaccaacagccccaaatttaccccaaaattgggttctctccatattggaa---------cttgggaaca +aactgatat---tgacaccaaccagcccacta---------------------------aattcaccccag- +--------tcgggct------------------acatgaacacacagattataaccagtggactttgcctaa +ttattctggtgca-ttaacc------ctcaatatgggattggcccctcctgttgctcccactttccctggtg +aacagattctcttctttagatctcatgtccct-------cttaaaggaggagt-----agcag--------- +--acacagtcattgattgcctcctgccacaggagtgggtccaacacctttaccaggaatctgccccctcaca +gtcagatgtggccctaatcagattcacaaacccagacacagggcgtgtcttatttgaggcaaaattacacag +aaatggctacatcactgtgtccaatactggaagcaaaccaattgttgtgccagctaatggttactttagatt +tgactcctgggtcaaccaattttattctcttgcccccatgggaactgggaacgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgcaggtgacatagtcactaacagcatt +ggctcacttgtgaacgctgg---ggccaacgcaataaaccagaaagtagactttgaaaacaataaacaa--- +------------------------------cttcaacaggcctccttcaatcatgacaaagagatgctacaa +gcccaaatccaagccacaaaacagttgcagcaagatatgattgcaatcaggcagggggttttgaccgcaggc +ggcttttcccccactgatgcagcgagaggtgcagtcaacgcaccgatgactcaagtcttggactggaatggt +actaggtactgggctcctggggctacaaggacaactgccttttcaggaggattcaccagctcc--------- +ac-------------ccataccaagactgttgatttat---------------------------------c +caataaa----------------acaacagctgcaccaatcccctc-------------------------- +-----aaagcccatatc--taggcctagttctt--ctgtttcttcaaattcaacccgctcaactctagttag +tgggtctt--------------------------------ctacctctccttctgtg--------------- +------------agga-----gtctgtctag------tgtttcttc---------------------ccagt +cttcctc--------------------------------------------tc------------------c +ttcttc---------------------------------------ccgaaccagtgagtgggtgcggagtca +gaatagagcactggaaccatacatga---ggggggcgttgcaaacagcttacgttacgcctccctctagtag +ggcttcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +ggaaattttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgcttttcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatag-------- +-------aat-ttctc----t-------------ttttac--------ct-ct---------tcttttatt- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305594.1/1-7521 |Norovirus GII isolate 110-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttctactgtcaggcaacc +ggatgaagtcaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatacgtggagcgaggtcttgt +actcggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttattctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacatattcctgtgtactctatcttcactattcac +caggcccatcaaagacataatagggaagctaagacctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaagcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaagaggagct +ttccagcagaccaagacctgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggagagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgccataattatcaccacaaatctggccaacccagcaccattggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagaccctca +ctactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatttcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcgccaccgtgcagaccaataacgagcttgtcggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaaaccacaagtggaagacacagagga--------gactatcaacaagggcgggtccccaaaacccaaa-- +-gat----gatgagg---agttcgtcatctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agaccggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaagaaacggtaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctccgaaa +tcaggaagaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcaattttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagtctgttcataacatcaactcatgtcataccccatggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgccgcctaaggttcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactacgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttttggagatcatctacaacacctctcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcttccctcgacaagactacttccagtggccacccacat +cacatacggaagaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattat +t-ctcggtgggattcaacacaacaaagagccgtgttggcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +gaaatatcaatcaatgagggtctcccctctggggtaccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagttacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagctggacccagagaaattgacagcaaaactt +aaggaatacgggttgagaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagctca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttactgggcgaggccgcactccacggcccagcgttctacagcaaagtt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtggatgttaggcaattggaacctgtgttgatccccctacctgatgtcaggaacaatttctatcatta +caatcaatcacatgat---tctaccctcaagttgatagcaatgttgtacacaccactcagggctaacaatgc +cggggatgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattcct +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaagg---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgtacgactgatggcgtgctcttaggcactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcctcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgc-----------gcccacaaagccacagt +gagcactgggagtgtccacttcactccaaaactgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaagacggtgatca---ccatcagaatgagccccaacaatgggtactaccaaa +ttactcaggtagg-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttaggtctactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttctaccaggaagcagctccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctgggttggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaagattg +caacaagcttccttccagtttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacagggcctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctagggttac------------------------------ +------------------------------cgtccccactcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctgctgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgttttaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305595.1/1-7491 |Norovirus GII isolate 110-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataacacaa +aaacaaaa---------------acccccacgaccgcccaccccagaactgatc-------aaaaagatccc +gcc-----------------------------ccccccgcccaacgg------ggaggacgagttggtggtc +tcctatagcg----------taaa---agatggcgtttccggtttgcctgagctctccaccgtcagccagcc +gggcgagaccaacacggcgtttagtgttcccccactcaaccaaagggaaaacagagacgctaaggagccact +aactggcactattctggaaatgtgggatggggagatctaccattatggcctgtatgtggaacggggtttggt +gcttggggtacacaaaccaccagcagctatcagctttgccaaggttgagctgacaccattgtccctgtactg +gagaccagtgtacacccctc---agtaccttatatccccggacaccctcagaaaactacacggggagtcatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcctggacctgaacgactcttggct +tag---caggaggatgatacagagaacaactggctttttcaggccttaccaggactggaacagaaaacccct +ccccaccatggatgattccaaattaaagaaggtggccaatgtagtcctgtgtgccttgtcatcattgttcac +cagacctattaaggacataattggaaaactaagacccctaaacatcctcaacatattggcttcctgcgattg +gacctttgcaggtatagtagaatccctaatcctcctggcagaactcttt---ggagtattttggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactatgaactacaggggcctgaggaccttgctgtaga +actcgtaccagtggtaatgggggggataggtttggttctaggtttcaccaaagagaaaattggcaagatgct +atcatctgccgcgtccactctcagggcttgtaaagatcttggagcttacgggttagaaatcttgaagctggt +catgaagtggtttttcccgaagaaagacgaggtgaacgaactcgcaatggtgagatccatcgaagacgcagt +attggacctcgaagcgattgaaaacaaccacatgaccgctctgctcaaagacaaggatagtttggcaaccta +tatgaacactctagatcttgaagaggagaaagctagaagactgtccaccaagtctgcctcccctgacatcgt +gggtacaataaacgccctgctggcacggatcgcagccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaaaccaggaatagggaagactcaccttgctag +agacctagcaaagaaaatcgcagccaccctcacaggagatcagagggtgggtctcatcccacgaaacggcgt +tgatcactgggacgcatataaaggtgaaagagttgtcctctgggatgactatgggatgagcaaccccatcca +tgacgccctcagattacaagaactcgccgacacgtgccctctgacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgatgctataatcatcacaactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcaaggcgtatcgacttccttgtgttcgctgatgctcctgatgttgagaaggcaa +agcgtgacttccctggacaacctgacatgtggaaagatgcctttagacctgacttctcacacataaagctga +tgctggccccccaagggggttttgacaagaatggcaacaccccacacgggaaaggcgtcatgaagaccctca +catctggctctctcattgcacgcgcatcagggctcctccatgagagattggatgaatacgagctgcagggcc +caacacccacaaccttcaactttgaccagaataaggtttttgctttcaggcaactcgctgctgagaacaagt +atgggttaatggacaccatgagagtgggaagccagctcaagggtgtcaaaaccatgtcagagcttaaacagg +cactcaagaacatcgcaatcaaaaagtgtcaaatagtctatggaggttcaacatattcacttgaatctgatg +gcaaaggcaatgtaaaggtcgagagagtgcagagcgcaactgtgcagaccaacaacgaactgacaggtgctc +tgcaccatctcagatgcgccaggatcaggtattacgttaagtgtgtccaggaggccctgtactctatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaacctttggt +ccaggccacaagtggaggacacagaaga--------gaccatcaacaaagatgggtgcccaaagcccaaa-- +-gat----gatgagg---agtttgtcgtatcgtctgaggacataaaagttgagggcaagaagggaaagaaca +agtctggtcgtggtaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaatata +aaagaattagggaagaaagaaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaggtggccatagctagggctactgaggaggacttctgtgaggaagaggaggccaagatccgacaga +ggatcttcagaccaacgaggaaacaacgcaaagaggagagggcctctcttggactggtcacaggctcagaaa +tcagaaagagaaacccagatgacttcaaacctaagggaaaattgtgggctgatgacgacaggagtgttgact +acaatgagaaactcagttttgaagctcccccaagtatctggtcaagaatagtcaactttggttcaggttggg +gcttctgggtctcac-caagcctgttcataacatccactcatgttatacctcagggagcacaggagttcttc +ggggtttccattaggcagattcaaatccacaaatcaggtgaattctgtcgactaagattcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaggagggggcccctgaaggaacagtggccacactgctcataaag +agaccaactggggaactcatgccattggcggctaggatgggcacccacgcaaccatgaagatccaaggccgc +accgtcgggggtcaaatggggatgcttttgacaggatccaatgccaagagcatggacttgggcaccacacca +ggtgactgtggatgtccatacatctacaagagaggaaatgactatgtagtcattggggtccacacagccgct +gctcgcggaggaaacactgtcatctgtgcaacccaaggaagcgaaggtgaggccgtacttgagggtggtgat +aacaagggcacctattgcggtgccccgatcctaggtccagggagcgccccaaagctcagcaccaagaccaaa +ttctggaggtcatcaacagcaccactcccacccggcacatacgaaccagcctacctaggaggtaaggatccc +agggtcaagggtggcccctcattacagcaagtcatgagagaccaattgaaaccattcacagaacccagggga +aagccaccaaacccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgaacaaacaatagac +ccaccccaaaaatggtcattttcacaggcatgtgcatcccttgataaaaccacctccagtggtcatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacaggaaaattggcagatcaagcttcaaaagct +aacctgatgtatgaggaggggaagaatatgaccccagtctacacaggtgcactcaaggatgagctagtcaaa +actgataaaatatatggaaaaattaagaagagacttctctggggatcagacctggcaaccatgatccgttgt +gctcgagcattcggaggactaatggatgaactcaaggcccactgtgtcacactccctattagagttgggatg +aacatgaatgaagatggccccattatctttgagaaacattctaggtaccactaccattatgatgcagactac +t-cccggtgggattcgacacaacagagagctgtgctagctgcagccctagaaatcatgg-taaaattctctt +cagaaccacatct-agcccaggtagtcgcagaagaccttttgtctcccagtgtgatggacgtgggcgatttc +aagatatcaattactgaagggcttccttctggggtgccttgcacttcacagtggaattccatcgcccattgg +ctcctgacactctgtgcactctctgaggtaacaaatttgtcccctgacatcatccaagcaaattccctcttc +tccttctatggtgatgatgaaatcgtgagcacagatatcaaattagacccgggaaagcttacagccaagtta +atagagtatgggctaaaaccaactcgccctgacaagactgaagggcctctggtcatctctgaggacctagat +ggtctgaccttcttgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcaaagttca +atacttagacaaatgtattggaccaggggccctaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacagctaatgtcactgctaggtgaagcagcactgcatggaccatcattctacagcaggatc +agtaagctggtcattgcagagttgaaggaaggtggcatggacttttacgtgcctagacaggagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcacttgagccagtggttggggcttcaatagcggctccactcactggtcaaaataatattataga +cccctggattagattaaattttgtacaggcccccaatggagagttcactgtctcaccacggaactcacctgg +agaagtcttgctaaacttagaattaggccctgaactaaatccttatttgtcacatctatctagaatgtataa +tggttatgcaggaggagtggaggtgcaagtgttgctggccgggaatgcgttcacagc---tggaaaattggt +gtttgctgcagtccctccccactttccattagaaaatattagccctggacaaataactatgttcccccatgt +gattgttgatgttagaactttagaaccagttttgttgcccctcccagatgttaggaataatttctttcatta +taatcagcaaaatgaa---cccagaatgagacttgtggctatgctctacacccccctcaggtccaatggttc +tggtgatgatgtcttcactgtctcctgcagggtgctcactcgcccctctcctgattttgattttaattatct +ggttccccccacagttgaatcaaagacaaaaccattcacattgcctatcctaactatgggtgagctgaccaa +ttctagg---tttcctgtacctatagatgaactttacaccagccccaatgagaacctggttgtgcaacccca +gaatggtaggtgtacgctagatggggagttgcaggggacaacccagcttcttcccacggcagtctgctcgtt +ccgtg-----------------------------------------gc------------------------ +---------------------------------------------cgcataaacacaaaggtggccggg--- +---gaagataatg----------------------------------tttggaac----------------- +----------------atgcaagtcactaatatcaatggaacaccctttgacccaactgaggatgtcccagc +accattgggcacccccgacttttcagggaaaatcttcggcgtactcagccaaa---gaaa------------ +-----ta------------caaacaatgcctgc--------aga-----------gcccatgatgcagtggt +ggcaaccaacagccccaaatttaccccaaaattgggttctctccatattggaa---------cttgggaaca +aactgatat---tgacaccaaccagcccacta---------------------------aattcaccccag- +--------tcgggct------------------acatgaacacacagattataaccagtggactttgcctaa +ttattctggtgca-ttaacc------ctcaatatgggattggcccctcctgttgctcccactttccctggtg +aacagattctcttctttagatctcatgtccct-------cttaaaggaggagt-----agcag--------- +--acacagtcattgattgcctcctgccacaggagtgggtccaacacctttaccaggaatctgccccctcaca +gtcagatgtggccctaatcagattcacaaacccagacacagggcgtgtcttatttgaggcaaaattacacag +aaatggctacatcactgtgtccaatactggaagcaaaccaattgttgtgccagctaatggttactttagatt +tgactcctgggtcaaccaattttattctcttgcccccatgggaactgggaacgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgcaggtgacatagtcactaacagcatt +ggctcacttgtgaacgctgg---ggccaacgcaataaaccagaaagtagactttgaaaacaataaacaa--- +------------------------------cttcaacaggcctccttcaatcatgacaaagagatgctacaa +gcccaaatccaagccacaaaacagttgcagcaagatatgattgcaatcaggcagggggttttgaccgcaggc +ggcttttcccccactgatgcagcgagaggtgcagtcaacgcaccgatgactcaagtcttggactggaatggt +actaggtactgggctcctggggctacaaggacaactgccttttcaggaggattcaccagctcc--------- +ac-------------ccataccaagactgttgatttat---------------------------------c +caataaa----------------acaacagctgcaccaatcccctc-------------------------- +-----aaagcccatatc--taggcctagttctt--ctgtttcttcaaattcaacccgctcaactctagttag +tgggtctt--------------------------------ctacctctccttctgtg--------------- +------------agga-----gtctgtctag------tgtttcttc---------------------ccagt +cttcctc--------------------------------------------tc------------------c +ttcttc---------------------------------------ccgaaccagtgagtgggtgcggagtca +gaatagagcactggaaccatacatga---ggggggcgttgcaaacagcttacgttacgcctccctctagtag +ggcttcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +ggaaattttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgcttttcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatag-------- +-------aat-ttctc----t-------------ttttac--------ct-ct---------tcttttatt- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305596.1/1-7491 |Norovirus GII isolate 110-7 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataacacaa +aaacaaaa---------------acccccacgaccgcccaccccagaactgatc-------aaaaagatccc +gcc-----------------------------ccccccgcccaacgg------ggaggacgagttggtggtc +tcctatagcg----------taaa---agatggcgtttccggtttgcctgagctctccaccgtcagccagcc +gggcgagaccaacacggcgtttagtgttcccccactcaaccaaagggaaaacagagacgctaaggagccact +aactggcactattctggaaatgtgggatggggagatctaccattatggcctgtatgtggaacggggtttggt +gcttggggtacacaaaccaccagcagctatcagctttgccaaggttgagctgacaccattgtccctgtactg +gagaccagtgtacacccctc---agtaccttatatccccggacaccctcagaaaactacacggggagtcatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcctggacctgaacgactcttggct +tag---caggaggatgatacagagaacaactggctttttcaggccttaccaggactggaacagaaaacccct +ccccaccatggatgattccaaattaaagaaggtggccaatgtagtcctgtgtgccttgtcatcattgttcac +cagacctattaaggacataattggaaaactaagacccctaaacatcctcaacatattggcttcctgcgattg +gacctttgcaggtatagtagaatccctaatcctcctggcagaactcttt---ggagtattttggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactatgaactacaggggcctgaggaccttgctgtaga +actcgtaccagtggtaatgggggggataggtttggttctaggtttcaccaaagagaaaattggcaagatgct +atcatctgccgcgtccactctcagggcttgtaaagatcttggagcttacgggttagaaatcttgaagctggt +catgaagtggtttttcccgaagaaagacgaggtgaacgaactcgcaatggtgagatccatcgaagacgcagt +attggacctcgaagcgattgaaaacaaccacatgaccgctctgctcaaagacaaggatagtttggcaaccta +tatgaacactctagatcttgaagaggagaaagctagaagactgtccaccaagtctgcctcccctgacatcgt +gggtacaataaacgccctgctggcacggatcgcagccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaaaccaggaatagggaagactcaccttgctag +agacctagcaaagaaaatcgcagccaccctcacaggagatcagagggtgggtctcatcccacgaaacggcgt +tgatcactgggacgcatataaaggtgaaagagttgtcctctgggatgactatgggatgagcaaccccatcca +tgacgccctcagattacaagaactcgccgacacgtgccctctgacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgatgctataatcatcacaactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcaaggcgtatcgacttccttgtgttcgctgatgctcctgatgttgagaaggcaa +agcgtgacttccctggacaacctgacatgtggaaagatgcctttagacctgacttctcacacataaagctga +tgctggccccccaagggggttttgacaagaatggcaacaccccacacgggaaaggcgtcatgaagaccctca +catctggctctctcattgcacgcgcatcagggctcctccatgagagattggatgaatacgagctgcagggcc +caacacccacaaccttcaactttgaccagaataaggtttttgctttcaggcaactcgctgctgagaacaagt +atgggttaatggacaccatgagagtgggaagccagctcaagggtgtcaaaaccatgtcagagcttaaacagg +cactcaagaacatcgcaatcaaaaagtgtcaaatagtctatggaggttcaacatattcacttgaatctgatg +gcaaaggcaatgtaaaggtcgagagagtgcagagcgcaactgtgcagaccaacaacgaactgacaggtgctc +tgcaccatctcagatgcgccaggatcaggtattacgttaagtgtgtccaggaggccctgtactctatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaacctttggt +ccaggccacaagtggaggacacagaaga--------gaccatcaacaaagatgggtgcccaaagcccaaa-- +-gat----gatgagg---agtttgtcgtatcgtctgaggacataaaagttgagggcaagaagggaaagaaca +agtctggtcgtggtaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaatata +aaagaattagggaagaaagaaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaggtggccatagctagggctactgaggaggacttctgtgaggaagaggaggccaagatccgacaga +ggatcttcagaccaacgaggaaacaacgcaaagaggagagggcctctcttggactggtcacaggctcagaaa +tcagaaagagaaacccagatgacttcaaacctaagggaaaattgtgggctgatgacgacaggagtgttgact +acaatgagaaactcagttttgaagctcccccaagtatctggtcaagaatagtcaactttggttcaggttggg +gcttctgggtctcac-caagcctgttcataacatccactcatgttatacctcagggagcacaggagttcttc +ggggtttccattaggcagattcaaatccacaaatcaggtgaattctgtcgactaagattcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaggagggggcccctgaaggaacagtggccacactgctcataaag +agaccaactggggaactcatgccattggcggctaggatgggcacccacgcaaccatgaagatccaaggccgc +accgtcgggggtcaaatggggatgcttttgacaggatccaatgccaagagcatggacttgggcaccacacca +ggtgactgtggatgtccatacatctacaagagaggaaatgactatgtagtcattggggtccacacagccgct +gctcgcggaggaaacactgtcatctgtgcaacccaaggaagcgaaggtgaggccgtacttgagggtggtgat +aacaagggcacctattgcggtgccccgatcctaggtccagggagcgccccaaagctcagcaccaagaccaaa +ttctggaggtcatcaacagcaccactcccacccggcacatacgaaccagcctacctaggaggtaaggatccc +agggtcaagggtggcccctcattacagcaagtcatgagagaccaattgaaaccattcacagaacccagggga +aagccaccaaacccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgaacaaacaatagac +ccaccccaaaaatggtcattttcacaggcatgtgcatcccttgataaaaccacctccagtggtcatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacaggaaaattggcagatcaagcttcaaaagct +aacctgatgtatgaggaggggaagaatatgaccccagtctacacaggtgcactcaaggatgagctagtcaaa +actgataaaatatatggaaaaattaagaagagacttctctggggatcagacctggcaaccatgatccgttgt +gctcgagcattcggaggactaatggatgaactcaaggcccactgtgtcacactccctattagagttgggatg +aacatgaatgaagatggccccattatctttgagaaacattctaggtaccactaccattatgatgcagactac +t-cccggtgggattcgacacaacagagagctgtgctagctgcagccctagaaatcatgg-taaaattctctt +cagaaccacatct-agcccaggtagtcgcagaagaccttttgtctcccagtgtgatggacgtgggcgatttc +aagatatcaattactgaagggcttccttctggggtgccttgcacttcacagtggaattccatcgcccattgg +ctcctgacactctgtgcactctctgaggtaacaaatttgtcccctgacatcatccaagcaaattccctcttc +tccttctatggtgatgatgaaatcgtgagcacagatatcaaattagacccgggaaagcttacagccaagtta +atagagtatgggctaaaaccaactcgccctgacaagactgaagggcctctggtcatctctgaggacctagat +ggtctgaccttcttgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcaaagttca +atacttagacaaatgtattggaccaggggccctaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacagctaatgtcactgctaggtgaagcagcactgcatggaccatcattctacagcaggatc +agtaagctggtcattgcagagttgaaggaaggtggcatggacttttacgtgcctagacaggagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcacttgagccagtggttggggcttcaatagcggctccactcactggtcaaaataatattataga +cccctggattagattaaattttgtacaggcccccaatggagagttcactgtctcaccacggaactcacctgg +agaagtcttgctaaacttagaattaggccctgaactaaatccttatttgtcacatctatctagaatgtataa +tggttatgcaggaggagtggaggtgcaagtgttgctggccgggaatgcgttcacagc---tggaaaattggt +gtttgctgcagtccctccccactttccattagaaaatattagccctggacaaataactatgttcccccatgt +gattgttgatgttagaactttagaaccagttttgttgcccctcccagatgttaggaataatttctttcatta +taatcagcaaaatgaa---cccagaatgagacttgtggctatgctctacacccccctcaggtccaatggttc +tggtgatgatgtcttcactgtctcctgcagggtgctcactcgcccctctcctgattttgattttaattatct +ggttccccccacagttgaatcaaagacaaaaccattcacattgcctatcctaactatgggtgagctgaccaa +ttctagg---tttcctgtacctatagatgaactttacaccagccccaatgagaacctggttgtgcaacccca +gaatggtaggtgtacgctagatggggagttgcaggggacaacccagcttcttcccacggcagtctgctcgtt +ccgtg-----------------------------------------gc------------------------ +---------------------------------------------cgcataaacacaaaggtggccggg--- +---gaagataatg----------------------------------tttggaac----------------- +----------------atgcaagtcactaatatcaatggaacaccctttgacccaactgaggatgtcccagc +accattgggcacccccgacttttcagggaaaatcttcggcgtactcagccaaa---gaaa------------ +-----ta------------caaacaatgcctgc--------aga-----------gcccatgatgcagtggt +ggcaaccaacagccccaaatttaccccaaaattgggttctctccatattggaa---------cttgggaaca +aactgatat---tgacaccaaccagcccacta---------------------------aattcaccccag- +--------tcgggct------------------acatgaacacacagattataaccagtggactttgcctaa +ttattctggtgca-ttaacc------ctcaatatgggattggcccctcctgttgctcccactttccctggtg +aacagattctcttctttagatctcatgtccct-------cttaaaggaggagt-----agcag--------- +--acacagtcattgattgcctcctgccacaggagtgggtccaacacctttaccaggaatctgccccctcaca +gtcagatgtggccctaatcagattcacaaacccagacacagggcgtgtcttatttgaggcaaaattacacag +aaatggctacatcactgtgtccaatactggaagcaaaccaattgttgtgccagctaatggttactttagatt +tgactcctgggtcaaccaattttattctcttgcccccatgggaactgggaacgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgcaggtgacatagtcactaacagcatt +ggctcacttgtgaacgctgg---ggccaacgcaataaaccagaaagtagactttgaaaacaataaacaa--- +------------------------------cttcaacaggcctccttcaatcatgacaaagagatgctacaa +gcccaaatccaagccacaaaacagttgcagcaagatatgattgcaatcaggcagggggttttgaccgcaggc +ggcttttcccccactgatgcagcgagaggtgcagtcaacgcaccgatgactcaagtcttggactggaatggt +actaggtactgggctcctggggctacaaggacaactgccttttcaggaggattcaccagctcc--------- +ac-------------ccataccaagactgttgatttat---------------------------------c +caataaa----------------acaacagctgcaccaatcccctc-------------------------- +-----aaagcccatatc--taggcctagttctt--ctgtttcttcaaattcaacccgctcaactctagttag +tgggtctt--------------------------------ctacctctccttctgtg--------------- +------------agga-----gtctgtctag------tgtttcttc---------------------ccagt +cttcctc--------------------------------------------tc------------------c +ttcttc---------------------------------------ccgaaccagtgagtgggtgcggagtca +gaatagagcactggaaccatacatga---ggggggcgttgcaaacagcttacgttacgcctccctctagtag +ggcttcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +ggaaattttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgcttttcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatag-------- +-------aat-ttctc----t-------------ttttac--------ct-ct---------tcttttatt- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305597.1/1-7491 |Norovirus GII isolate 110-8 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataacacaa +aaacaaaa---------------acccccacgaccgcccaccccagaactgatc-------aaaaagatccc +gcc-----------------------------ccccccgcccaacgg------ggaggacgagttggtggtc +tcctatagcg----------taaa---agatggcgtttccggtttgcctgagctctccaccgtcagccagcc +gggcgagaccaacacggcgtttagtgttcccccactcaaccaaagggaaaacagagacgctaaggagccact +aactggcactattctggaaatgtgggatggggagatctaccattatggcctgtatgtggaacggggtttggt +gcttggggtacacaaaccaccagcagctatcagctttgccaaggttgagctgacaccattgtccctgtactg +gagaccagtgtacacccctc---agtaccttatatccccggacaccctcagaaaactacacggggagtcatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcctggacctgaacgactcttggct +tag---caggaggatgatacagagaacaactggctttttcaggccttaccaggactggaacagaaaacccct +ccccaccatggatgattccaaattaaagaaggtggccaatgtagtcctgtgtgccttgtcatcattgttcac +cagacctattaaggacataattggaaaactaagacccctaaacatcctcaacatattggcttcctgcgattg +gacctttgcaggtatagtagaatccctaatcctcctggcagaactcttt---ggagtattttggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactatgaactacaggggcctgaggaccttgctgtaga +actcgtaccagtggtaatgggggggataggtttggttctaggtttcaccaaagagaaaattggcaagatgct +atcatctgccgcgtccactctcagggcttgtaaagatcttggagcttacgggttagaaatcttgaagctggt +catgaagtggtttttcccgaagaaagacgaggtgaacgaactcgcaatggtgagatccatcgaagacgcagt +attggacctcgaagcgattgaaaacaaccacatgaccgctctgctcaaagacaaggatagtttggcaaccta +tatgaacactctagatcttgaagaggagaaagctagaagactgtccaccaagtctgcctcccctgacatcgt +gggtacaataaacgccctgctggcacggatcgcagccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaaaccaggaatagggaagactcaccttgctag +agacctagcaaagaaaatcgcagccaccctcacaggagatcagagggtgggtctcatcccacgaaacggcgt +tgatcactgggacgcatataaaggtgaaagagttgtcctctgggatgactatgggatgagcaaccccatcca +tgacgccctcagattacaagaactcgccgacacgtgccctctgacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgatgctataatcatcacaactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcaaggcgtatcgacttccttgtgttcgctgatgctcctgatgttgagaaggcaa +agcgtgacttccctggacaacctgacatgtggaaagatgcctttagacctgacttctcacacataaagctga +tgctggccccccaagggggttttgacaagaatggcaacaccccacacgggaaaggcgtcatgaagaccctca +catctggctctctcattgcacgcgcatcagggctcctccatgagagattggatgaatacgagctgcagggcc +caacacccacaaccttcaactttgaccagaataaggtttttgctttcaggcaactcgctgctgagaacaagt +atgggttaatggacaccatgagagtgggaagccagctcaagggtgtcaaaaccatgtcagagcttaaacagg +cactcaagaacatcgcaatcaaaaagtgtcaaatagtctatggaggttcaacatattcacttgaatctgatg +gcaaaggcaatgtaaaggtcgagagagtgcagagcgcaactgtgcagaccaacaacgaactgacaggtgctc +tgcaccatctcagatgcgccaggatcaggtattacgttaagtgtgtccaggaggccctgtactctatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaacctttggt +ccaggccacaagtggaggacacagaaga--------gaccatcaacaaagatgggtgcccaaagcccaaa-- +-gat----gatgagg---agtttgtcgtatcgtctgaggacataaaagttgagggcaagaagggaaagaaca +agtctggtcgtggtaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaatata +aaagaattagggaagaaagaaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaggtggccatagctagggctactgaggaggacttctgtgaggaagaggaggccaagatccgacaga +ggatcttcagaccaacgaggaaacaacgcaaagaggagagggcctctcttggactggtcacaggctcagaaa +tcagaaagagaaacccagatgacttcaaacctaagggaaaattgtgggctgatgacgacaggagtgttgact +acaatgagaaactcagttttgaagctcccccaagtatctggtcaagaatagtcaactttggttcaggttggg +gcttctgggtctcac-caagcctgttcataacatccactcatgttatacctcagggagcacaggagttcttc +ggggtttccattaggcagattcaaatccacaaatcaggtgaattctgtcgactaagattcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaggagggggcccctgaaggaacagtggccacactgctcataaag +agaccaactggggaactcatgccattggcggctaggatgggcacccacgcaaccatgaagatccaaggccgc +accgtcgggggtcaaatggggatgcttttgacaggatccaatgccaagagcatggacttgggcaccacacca +ggtgactgtggatgtccatacatctacaagagaggaaatgactatgtagtcattggggtccacacagccgct +gctcgcggaggaaacactgtcatctgtgcaacccaaggaagcgaaggtgaggccgtacttgagggtggtgat +aacaagggcacctattgcggtgccccgatcctaggtccagggagcgccccaaagctcagcaccaagaccaaa +ttctggaggtcatcaacagcaccactcccacccggcacatacgaaccagcctacctaggaggtaaggatccc +agggtcaagggtggcccctcattacagcaagtcatgagagaccaattgaaaccattcacagaacccagggga +aagccaccaaacccaagtgtgctggaagctgccaagaagaccatcatcaatgtccttgaacaaacaatagac +ccaccccaaaaatggtcattttcacaggcatgtgcatcccttgataaaaccacctccagtggtcatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacaggaaaattggcagatcaagcttcaaaagct +aacctgatgtatgaggaggggaagaatatgaccccagtctacacaggtgcactcaaggatgagctagtcaaa +actgataaaatatatggaaaaattaagaagagacttctctggggatcagacctggcaaccatgatccgttgt +gctcgagcattcggaggactaatggatgaactcaaggcccactgtgtcacactccctattagagttgggatg +aacatgaatgaagatggccccattatctttgagaaacattctaggtaccactaccattatgatgcagactac +t-cccggtgggattcgacacaacagagagctgtgctagctgcagccctagaaatcatgg-taaaattctctt +cagaaccacatct-agcccaggtagtcgcagaagaccttttgtctcccagtgtgatggacgtgggcgatttc +aagatatcaattactgaagggcttccttctggggtgccttgcacttcacagtggaattccatcgcccattgg +ctcctgacactctgtgcactctctgaggtaacaaatttgtcccctgacatcatccaagcaaattccctcttc +tccttctatggtgatgatgaaatcgtgagcacagatatcaaattagacccgggaaagcttacagccaagtta +atagagtatgggctaaaaccaactcgccctgacaagactgaagggcctctggtcatctctgaggacctagat +ggtctgaccttcttgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcaaagttca +atacttagacaaatgtattggaccaggggccctaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacagctaatgtcactgctaggtgaagcagcactgcatggaccatcattctacagcaggatc +agtaagctggtcattgcagagttgaaggaaggtggcatggacttttacgtgcctagacaggagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcacttgagccagtggttggggcttcaatagcggctccactcactggtcaaaataatattataga +cccctggattagattaaattttgtacaggcccccaatggagagttcactgtctcaccacggaactcacctgg +agaagtcttgctaaacttagaattaggccctgaactaaatccttatttgtcacatctatctagaatgtataa +tggttatgcaggaggagtggaggtgcaagtgttgctggccgggaatgcgttcacagc---tggaaaattggt +gtttgctgcagtccctccccactttccattagaaaatattagccctggacaaataactatgttcccccatgt +gattgttgatgttagaactttagaaccagttttgttgcccctcccagatgttaggaataatttctttcatta +taatcagcaaaatgaa---cccagaatgagacttgtggctatgctctacacccccctcaggtccaatggttc +tggtgatgatgtcttcactgtctcctgcagggtgctcactcgcccctctcctgattttgattttaattatct +ggttccccccacagttgaatcaaagacaaaaccattcacattgcctatcctaactatgggtgagctgaccaa +ttctagg---tttcctgtacctatagatgaactttacaccagccccaatgagaacctggttgtgcaacccca +gaatggtaggtgtacgctagatggggagttgcaggggacaacccagcttcttcccacggcagtctgctcgtt +ccgtg-----------------------------------------gc------------------------ +---------------------------------------------cgcataaacacaaaggtggccggg--- +---gaagataatg----------------------------------tttggaac----------------- +----------------atgcaagtcactaatatcaatggaacaccctttgacccaactgaggatgtcccagc +accattgggcacccccgacttttcagggaaaatcttcggcgtactcagccaaa---gaaa------------ +-----ta------------caaacaatgcctgc--------aga-----------gcccatgatgcagtggt +ggcaaccaacagccccaaatttaccccaaaattgggttctctccatattggaa---------cttgggaaca +aactgatat---tgacaccaaccagcccacta---------------------------aattcaccccag- +--------tcgggct------------------acatgaacacacagattataaccagtggactttgcctaa +ttattctggtgca-ttaacc------ctcaatatgggattggcccctcctgttgctcccactttccctggtg +aacagattctcttctttagatctcatgtccct-------cttaaaggaggagt-----agcag--------- +--acacagtcattgattgcctcctgccacaggagtgggtccaacacctttaccaggaatctgccccctcaca +gtcagatgtggccctaatcagattcacaaacccagacacagggcgtgtcttatttgaggcaaaattacacag +aaatggctacatcactgtgtccaatactggaagcaaaccaattgttgtgccagctaatggttactttagatt +tgactcctgggtcaaccaattttattctcttgcccccatgggaactgggaacgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgcaggtgacatagtcactaacagcatt +ggctcacttgtgaacgctgg---ggccaacgcaataaaccagaaagtagactttgaaaacaataaacaa--- +------------------------------cttcaacaggcctccttcaatcatgacaaagagatgctacaa +gcccaaatccaagccacaaaacagttgcagcaagatatgattgcaatcaggcagggggttttgaccgcaggc +ggcttttcccccactgatgcagcgagaggtgcagtcaacgcaccgatgactcaagtcttggactggaatggt +actaggtactgggctcctggggctacaaggacaactgccttttcaggaggattcaccagctcc--------- +ac-------------ccataccaagactgttgatttat---------------------------------c +caataaa----------------acaacagctgcaccaatcccctc-------------------------- +-----aaagcccatatc--taggcctagttctt--ctgtttcttcaaattcaacccgctcaactctagttag +tgggtctt--------------------------------ctacctctccttctgtg--------------- +------------agga-----gtctgtctag------tgtttcttc---------------------ccagt +cttcctc--------------------------------------------tc------------------c +ttcttc---------------------------------------ccgaaccagtgagtgggtgcggagtca +gaatagagcactggaaccatacatga---ggggggcgttgcaaacagcttacgttacgcctccctctagtag +ggcttcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +ggaaattttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgcttttcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatag-------- +-------aat-ttctc----t-------------ttttac--------ct-ct---------tcttttatt- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305598.1/1-7510 |Norovirus GII isolate 212 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccaataaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaaacaccc +agcggtga----------------ccagcactgccccacagttaagatcgggtccaaaacactagtgatccc +acc-----------------------------agaacccccaaacgg------cgaggac------attgtg +cagttcgacg----------caaaatcggaaactgtacgtgggctgcccgacctgacgacagt---gcaaaa +tgaacatgagaacaccccatacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactggagatgtgggatggtgagttctaccattactccatctacgtcagcggaggcaaagc +tctgggggtacacaaacccccagcggctataagcctcgcgacagtggagctcactcccatatccctttactg +gcggcctgtctacactccaa---actacctggtccacccagacacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtacttgaacttaacgacacgtggct +ttg---cagaaggagtatttctagaaccactggcttctttaaaccatatcagtcttggaacaggaagcccct +ccccaccattgatgatgggaagatcaaaaaggtggccaatgcaattctctgcgcacttggctcactgttttc +aaaaccaatcaaagacctactgggtaaactcaagccacttaacctactacatctgcttgcgtcatgtgactg +gacgtttgcgggtatagtagagacagtcatcttaatggcggaactcttc---aatgtattctggaccccacc +tgatgtttccaatttcatagcctccttgataggtgattttcagttacaaggacccgaggacttggctgtgga +gctcgtccccgtggttatgggaggcataggtatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgccgcgtcaaccctaagggcatgtaaagatctggggaactacgccctagacatactaaaactagt +cgtgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttaagggcgattgaggatgccgt +cttagacatggaggcaatagggaacaatcacctcacgacacttctcaaggacaaggatagccttactgcatt +tatgaaaaccctagatctagaggaggagaaagcaagaaagctatcgacgaagtcatcctcaccagacatcgt +cggcaccattaacgccatactggctagaatagcagccgctaggtccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggcattggcaaaacccacatggcaag +gcatctggctaagaatatagccaacacaatgagtggagaccagagagttggacttgtcccgcgcaacggggt +tgaccattgggatgcttacaggggggagagagtggtcctgtgggacgactatggtatggggaaccctgtcaa +agatgccttaacactgcaagaactggccgacacctgtccagtcaccttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacaaccaacttggtcaaccctgcacctctcgattatgt +gaacttcgaggcttg-ctccagaaggatcgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggtaccatgcgttctctga +cccaggggtctctgactgcaagagtggcgggtcttgttcacgagaggagagatgaattccagctgcaagggg +gtagcctacaaacatacaattttgataccaacagggtctctgcgtttaggaaactggccgcagacaacaagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcagagttg +ctttgagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatctgatg +gcaaaggcacagtctctgttaacaaagtcgaggacctcacttcccagactgcaaacgaggtgagttcagccc +tcctcaggctcagacaagcgagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtta---------------acagga------tctccaagaggttctgct +gggaaagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagaata---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaagaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaagaggccaaaataaggcaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggtgtgcttggtctggttactggcacggata +ttaggaagagaagaccagatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggact +acaatgagagacttgatttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctaattacaacaacacatgtcctgcctaagggtgttaaggaactcttt +ggtgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggcactgtttgctccatactcgtgaag +agaccaacaggtgagatgatccccctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcagg +actgttggtggccaaatgggaatgctcctcactggggcgaacgcaaagaacatggaccttggcaccggcccg +ggggattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgtccacactgcagcg +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcaaggcgcccaagctcagcacgaagaccaag +ttctggcgctcatcgcctgatgccctaccacccggcacatatgaacctgcctacctaggaggcaaggacccc +agagtagagaagggaccttccctgcagcaagttatgagggatcagttgaaacctttcacggaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgac +cccgctaaaccgtggacatactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcaggaagaatgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcctgtgtacacagctgcactcaaggatgagctcgtcaaa +actgacaaaatttacaagaagataaagaagaggctcctatgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggacgggcctatcatttttgacaagcactccaaatacagataccattatgacgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagttcaggaaggcctaccatcaggagtcccatgcacgtcacaatggaattcaatagcccactgg +atcttgactttgagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgtttc +tctttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggcccccttgtcataactgaggacctcacc +ggcctaacattcctgcgcaggtcgatcgcgcgggatcccgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtattggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactcc +cagcgagccacacaactcatggcccttcttggtgaagcttcactgcacggaccccaattctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaatattagtgcagctcaaatcacaatgtgcccccatgt +gattgttgatgtgagacagcttgagcctgtgcttttgcccctccctgatataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggctatgttgtacacacctcttagagc---aaactc +tggtgaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagcctttcacactccctattttaaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaattgtggtacaaccaca +aaatggcagatgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttaatcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgagtgagga----------------accacccc----------------- +----------ctccacgttcagctgaagaacctcgacggtacaccatatgacccaacagatgaggtgccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagttgctagccaga---gaaacaccacggggag +-----ct---ctgtaggg---------gcgacc--------cgc-----------gcccacgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gt---------attctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattccggtcac-ctcact------cttaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--caggccaaatagactgcctcatcccacaggaatgggtccagcacttctaccaggaggccgccccatcaca +atctgcggtggctcttatcagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgtagg---------ag +agccc---------aataatggcaggagctttctttgctggattagcaggtgacgccataacaaatggtgtc +gggtccctgatcaatgctgg---ggccaatgcaattaaccagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgttgcaa +tcacaagttctggccaccaaacagctccagcaagaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaaaattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcggg-tcagttctccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtt---ctgatcc---------------------------c +ccaa-------------------aagttaagattaat----------------------------------- +----------------------------------------------------------------------ag +tgatcctg-----------ctagtgtatatagttctacatccactgctccttcac----------------- +---------------------aatcaaccca---ttcaacgactctgactg-------cagg--------gt +ctggatc----a---tccag-------------------gacatcctcctctt---------ccgcagcaac +ttccac-------------------cct--------------atctaggaccagtgactgggtgaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgcac +acttacgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------cttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305599.1/1-7529 |Norovirus GII isolate Arg1261 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacatcaccccttcaaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagagaa----tgctgggtgccgtgcctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtcccacagttaagatcgggcccaaaacaataacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaagtcagaaactataagtggactaccggacttgacaacagt---gcaaaa +tgaacacgaaaacaccccatacaccgtccctccgttgagtgagagggaacataggccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggcggcaaggc +tctaggggtccacaaacccccggcagctataagcctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagtaacaattgttataacttctgttgctgggtacttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccataccagtcttggaataggaagcctct +cccaaccgttgatgatggaaaaatcaaaaaggtggccaacgcgatcctctgtacgctcggctcgctgttctc +aaagccaattaaagacctgttaggcaagctcaaaccattgaacttgctacacttgctcgcgtcatgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaactcttc---aacgtcttttggactccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtgga +gcttgttcctgtggtcatgggtggtatagggatggttctcggcttcaccgctgagaagataggtcgtatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgctcttgacatactcaaattagt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctagatatggaggctataggtaacaatcatctcacaaccctcctcaaggataaggacagtctcacggcttt +catgaagaccctggacctagaagaggagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgctgctagatccctcctgcacaaggccaaagaagagat +gttcagcaggatcagaccagtggttgtcatgatctcaggcagacctggcattggaaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtggtcttgtgggacgactatggcatggggaaccctgtcaa +agatgctttgacactacaagaattggctgacacatgcccagtcactctaaattgtgataggatcgagaacaa +ggggaagatgttcgacagtgatgtcatcataattacgaccaatctagttaaccctgcgcctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgacttcttggtctatgcagaatcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggattatttcaaacaagacttttcccacataaagctga +ccctagcccctcagggcggatttgacaagaatggtaacaccccgcatggcaagggtaccatgcgatccctca +cccaggggtccctgactgcaagagttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtctctgcattcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcggcactcaaaaatgtcaagactttggaagatctgaaagtcg +ccttgagagatgtaaaattcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaacgaggtgagctcagcac +tcctcagactcagacaggcaagggccagatattatgttagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagaa------tctccaaaaagttctgct +gggaaaagtgggtgaaaccaaccgagac-------------ccaagaaacgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagagaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtgcttggcttggtcactggctcagata +tcagaaagaggagaccagacgatttccaaccaaaaggcaacctgtgggcagatgacactaggagtgtagact +acaatgagagacttgacttcgaggctcccccaagcgtctggtcaagaatagtcccattgggtactggttggg +gtttctgggtttcat-ccaacctcctgatcacaacaacacacgtcctgcccaggggggtcaaggaactcttt +ggagttgaaatcaaacaaattcaaattcacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcataaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatatgtgccactcaaggacaagatggggaggcagtccttgaaggaaatgaa +aaccttggtacttactgtggtgccccaattttgggccctggcaaagcgcctaaactcagcacaaagactaaa +ttttggcgctcatcaccggatgccctacctcctggcacatatgaacctgcttacctggggggtaaggacccc +agagtggaaaaagggccctccctgcagcaagttatgagagaccagctgaaacccttcacagagcccaggggc +aagccacctagaccagcagtcttagaagaagctaaaaagacagtgatgaacgtcctagaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggtagcccccac +catgccaagaaaaatgaccactggaatggggagtctttcactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcactcaaagatgagcttgttaag +actgataagatctacaaaaagataaagaagaggcttctatgggggtcggaccttggtacgatgatcaggtgt +gccagggcttttggtggcctcatggacagtatgaaagcaagttgcatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtatcactatgatgctgactat +t-ctaggtgggattcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacccagccagctagatgtcggcgacttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcgcactgg +atcttaactctgagcgcaatggcagaagtatcaggtctctcaccagatgttgttcaagcccactcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agagagtatggtctggtccccacccgacctgataagactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctgcgcagatcgattgcacgggatccagctgggtggtttggaaaattggatcaagactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggttccccattct +cagcgagccacacagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacactga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccccgatataaggaacaggttcttccatta +caaccaggagaacacc---ccccgtatgagacttgtggccatgctctacacgcctctaagggc---taattc +tggtgaggatgtgttcactgtgtcctgtagggttctgactcgccctgctccagattttgagtttacattctt +agtaccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctctacactgatcccaatgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacgacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacagtatgacccaacagatgatattcctgc +ggtcctgggggctattgactttaaaggtacagtgtttggagtggctagtcaga---gggatatttctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tagtgattt---caacacaaatcaacccatta---------------------------ggttcaccccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattacctga +ttattctggtaga-ctgact------ttaaatatgaaccttgcccccgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaagcagcaccttcgca +atccgctgttgcactggttaggtacgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccagttttacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcaggattagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgaatatgacttcaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaagggatgttgaccgctggc +ggcttctcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggattggaatggc +acaagatattgggcacctaacagcatgaaaactacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcctccccagcataccgctcc---------------------------a +tcaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccctctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtatg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacctccacgt---------ccacagcaac +ctctac-------------------cct--------------gtctagaaccagcgactgggttagaggaca +gaatgaaagacttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcaagcag +ggcttca---tcaa------------------------------atggga---cggtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------tc-ctttttct---t-cctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305600.1/1-7482 |Norovirus GII isolate Arg4220 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccactgttgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagagaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaatg----------tcaa---agagggtgtttctggtttgcccgaactctcgacggtcacccaacc +ggaagagagctctacggcattcagcgtcccccctcttagtctgagggagaacagagatgcaaaggaaccctt +gactggagccatcttggaaatgtgggacggggagatctaccattatggcttgtacgtggaacgaggattggt +gctcggtgtacacaaaccaccagcagccattagccttgctaaggttgagttgacccccttgtctttgtattg +gagaccagtgtacactccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttaacttgaacgattcatggct +gag---caggaggatgatacagaggacaacgggcttctttcgaccctaccaggattggaacaggaaacctct +ccccacgatggatgactccaaagtgaagaaggtagccaatgttctcctctgtgctctctcatcattgtttac +cagaccaattaaggatattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gactttcgcaggcatagtagagtccctgatactcttggctgaactgttt---ggagttttctggacaccccc +agacgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtacccgtagtgatgggagggataggtttggtgctgggattcaccaaagagaagatcggcaaaatgct +ttcatctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaactggcgatggtgagatccatcgaggatgcagt +gctggacctcgaggccattgagaacaaccatatgacagcactgctcaaggataaggatagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctactttcaaggattgcagccgcccggtctctagtacacagggccaaggaggaact +gtcaagtaggccccgaccggtcgttgtgatgatttcaggaagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaatggagt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactatgggatgagcaaccctatcca +cgatgccctcagactccaggaactcgctgacacctgccccctgacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgctataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaaggcgtatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagatatgtggaaagacaccttcaaacctgatttctcacacataaaactga +cactagccccacaagggggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgtaacaaggtgcttgcttttaggcaacttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcgcagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggagcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtaaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccaggattaggtattatgtcaagtgtgtccaggaagctctctactccattttgc +aaattgccggggctgcgttcattaccacgcgcattgcaaagcgcatga------atatacaaaacctctggt +ccaaaccacaggtggaggatttggagga--------gactagcagcgaggagggttgcccaaaacctaaa-- +-aat----gatgagg---aatttgttatttcctccgatgacatcaaagccgagggcaagaaaggaaagaata +aagctggccgtggcaagaagcacacagccttttccagtaaaggtctcagtgacgaggagtacgaagagtaca +agagaatcagagaagagagaaatggaaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatattcagaccaacaagaaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gcttttgggtctcac-ctagcctcttcataacatcaacccatgtcattccccagggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcataaatcaggtgagttctgtcggcttaggttcccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggtatgctactcacagggtctaacgccaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagaggggtaacgactacgtggtcattggagttcacaccgctgcc +gctcgtggaggaaacactgtcatctgtgcgacccaaggaagcgagggtgaagccatgctagagggtggcgac +aacaagggaacctactgtggagcaccaatactaggccctgggaatgcccccaaactcagcactaaaaccaaa +ttctggaggtcatccaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggatcaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgttagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacagggaaactggcagaccaagcatcaaaggcc +aacctaatgtatgaggaaggaaagaacatgaccccagtgtacacaggagctttgaaggacgagctagtcaag +actgataagatctatgggaagatcaaaaagagactcctatgggggtcagacctatcaaccatgatacggtgt +gcacgagccttcggtggactgatggacgagctcaaggcccattgcgtcacactaccagtcagggttggcatg +aatatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-cccgctgggactcgacacaacaaagagcagtactggctgcagctctggaaataatgg-tcaaattctcat +cagaacctcatct-ggcccaagtggttgcggaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaatgaggggttaccctctggcgtaccttgcacctcacaatggaactccattgcccattgg +ctcctcacactatgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaattggacccagaaaaattgacaacaaaattg +agggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaggggaccaaaccatgaagacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattacatggcccatcattctacagtaaaatc +agcaaactggtcatctcagaattgaaagagggtgggatggatttttacgtgcccaggcaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgagccagtggctggcgctgccttggcggctccagtcactggccaaacaaatattataga +cccttggattagaacaaattttgtccaggcccctaatggtgaattcactgtttctccacgcaacgcccctgg +tgaagtgctgttaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggcggaatggaggtgcaggtcatgttagctggaaatgcgtttacagc---tggaaagttggt +cttcgccgcagtcccacctcactttcccgttgaaaatcttagcccacagcaaatcacaatgtttccccatgt +gattattgatgttagaactttggaacctgtcctgttaccactccctgatgttagaaataatttctttcatta +taatcaaaaggatgat---cctaagatgagaattgtggctatgctctatactcccctcagatcaaatggttc +tggtgatgatgtattcacagtttcttgtagagtgttaactaggccctcccctgatttcgattttacgtattt +ggtgccaccaacggtggaatccaaaacaaagccattcacactcccaatcctcacattaggggagatgtccaa +ttcaaga---tttccagtgcctatagatcaaatgtacactagccctaatgaagttatttctgtgcaatgtca +gaatggcaggtgcacactggacggggagctccaagggacaacccagctccaggtcagtggtatttgcgcatt +caagg-----------------------------------------gacaagtgaccgccc----------- +-----------acctacag--g------acaatggac----------------------------------- +----------atc----------------------------------tttacaat----------------- +----------------gtcaccatcacaaatttgaatgggtccccttttgacccctctgaggacatccccgc +tcccctgggtgttcccgactttgaagggagggttttcggtgtcatcagccaaagagataa------------ +-----ttacaattttgg--tggacaaaaccagcctgcaaatagg-----------tctcatgatgctgtggt +cccaacttacacagctcaatatactccaaaattgggtcaaattcaaattggca---------cgtggcagac +tgatgacat---aacagtcgaccagcctgcta---------------------------aattcaccccag- +--------ttgg------ccttagtga------------cacagaccactttaaccaatgggtggtccccag +gtatgctggtgca-ttaaat------ttgaacacaaatcttgccccttccgttgcaccggtgttcccaggag +agcggttgcttttctttagatcatacatcccc-------cttaaaggtggttt-----tggta--------- +--acccagccattgattgcctggtgccacaggagtggatacagcacttctaccaagaagctgctccctcact +gagtgaggtcgcccttgtcaggtatatcaatccggacactggtcgggcactgtttgaggccaagctccatag +ggctggcttcatgacagtctcgagtaacaccagtgccccggtggttgtacctgccaatgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactggcaatgggcgtaga---------ag +gattc---------aataatggctggtgcttttattgctggtttagcaggagacgtgctcagcaatgggctc +ggctcattaatcaatgcagg---tgctaatgtaattaatcagagagcagaatttgattttaatcgacag--- +------------------------------ttacaacaaaattcttttaatcatgataaggagatgttgcag +gctcaaatacaggcaaccaagcagctgcaggctgacatgatggctataaagcagggggtgttgactgctggc +ggcttctcccccgctgatgcagccaggggcgctgtaaatgcgcccatgacacaagcactagattggaatggc +acaaggtactgggcaccaagttccatgagaacaacatcctattccggaagattcacatcaacc--------- +ac-------------tccaataagacagg----ctgat---------------------------------t +tt-------------------------caacacacccaaacccggccttcaagtggttcttccgtggcctcc +tactccacacagtcctc--aag--------------------------accaacctcaataacaactgcg-- +-gggtctt--------------------------------caaccacgtccaactcga-------------- +----------c-----------ccgcagtac------aaatctccc---------------------ctcga +cagtttc--------ta---------------------------------ggg------------------c +cacctc---------------------------------------tagaactagtgagtgggttagagacca +aaataggaatttggaaccctacatgc---gtggtgccttacaaacagcctttgtcacaccaccttctagcag +ggcatct---gat---------------------------------ggga---cggtctcaaccgttcccaa +gggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggaaa-------- +-------att-tta--------------------aaat-g--------at-ttga-------------ttt- +--------------gcc---ttt------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305601.1/1-7482 |Norovirus GII isolate Arg4231 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccactgttgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aagagaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaatg----------tcaa---agagggtgtttctggtttgcccgaactctcgacggtcacccaacc +ggaagagagctctacggcattcagcgtcccccctcttagtctgagggagaacagagatgcaaaggaaccctt +gactggagccatcttggaaatgtgggacggggagatctaccattatggcttgtacgtggaacgaggattggt +gctcggcgtacacaaaccaccagcagccattagccttgctaaggttgagttgacccccttgtctttgtattg +gagaccagtgtacactccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---caggaggatgatacagaggacaacgggcttctttcgaccctaccaggattggaacaggaaacctct +ccccacgatggatgactccaaagtgaagaaggtagccaatgttctcctctgtgctctctcatcattgtttac +cagaccaattaaggatattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gactttcgcaggcatagtagagtccctgatactcttggctgaactgttt---ggagttttctggacaccccc +agacgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtacccgtagtgatgggagggataggtttggtgctgggattcaccaaagagaagatcggcaaaatgct +ttcatctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaactggcgatggtgagatccatcgaggatgcagt +gctggacctcgaggccattgagaacaaccatatgacagcactgctcaaggataaggatagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctactttcaaggattgcagccgcccggtctctagtacacagggccaaggaggaact +gtcaagtaggccccgaccggtcgttgtgatgatttcaggaagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaatggagt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactatgggatgagcaaccctatcca +cgatgccctcagactccaggaactcgctgacacctgccccctgacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgctataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaaggcgtatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagatatgtggaaagacaccttcaaacctgatttctcacacataaaactga +cactagccccacaagggggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgtaacaaggtgcttgcttttaggcaacttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcgcagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggagcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtaaataacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccaggattaggtattatgtcaagtgtgtccaggaagctctctactccattttgc +aaattgccggggctgcgttcattaccacgcgcattgcaaagcgcatga------atatacaaaacctctggt +ccaaaccacaggtggaggatttggagga--------gactagcagcggggagggttgcccaaaacctaaa-- +-aat----gatgagg---aatttgttatttcctccgatgacatcaaagccgagggcaagaaaggaaagaata +aagctggccgtggcaagaagcacacagccttttccagtaaaggtctcagtgacgaggagtacgatgagtaca +agagaatcagagaagagagaaatggaaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatattcagaccaacaagaaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gcttttgggtctcac-ctagcctcttcataacatcaacccatgtcattccccagggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcataaatcaggtgagttctgtcggcttaggttcccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggtatgctactcacagggtctaacgccaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagaggggtaacgactacgtggtcattggagttcacaccgctgcc +gctcgtggaggaaacactgtcatctgtgcgacccaaggaagcgagggtgaagccatgctagagggtggcgac +aacaagggaacctactgtggagcaccaatactaggccctgggaatgcccccaaactcagcactaaaaccaaa +ttctggaggtcatccaccacccctctgccacccggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggatcaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgttagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggggagactttcacagggaaactggcagaccaagcatcaaaggcc +aacctaatgtatgaggaaggaaagaacatgaccccagtgtacacaggagctttgaaggacgagctagtcaag +actgataagatctatgggaagatcaaaaagagactcctatgggggtcagacctatcaaccatgatacggtgt +gcacgagccttcggtggactgatggacgagctcaaggcccattgcgtcacactaccagtcagggttggcatg +aatatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-cccgctgggactcgacacaacaaagagcagtactggctgcagctctggaaataatgg-tcaaattctcat +cagaacctcatct-ggcccaagtggttgcggaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaatgaggggttaccctctggcgtaccttgcacctcacaatggaactccattgcccattgg +ctcctcacactatgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaattggacccagaaaaattgacaacaaaattg +agggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaggggaccaaaccatgaagacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattacatggcccatcattctacagtaaaatc +agcaaactggtcatctcagaattgaaagagggtgggatggatttttacgtgcccaggcaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgagccagtggctggcgctgccttggcggctccagtcactggccaaacaaatattataga +cccttggattagaacaaattttgtccaggcccctaatggtgaattcactgtttctccacgcaacgcccctgg +tgaagtgctgttaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggcggaatggaggtgcaggtcatgttagctggaaatgcgtttacagc---tggaaagttggt +cttcgccgcagtcccacctcactttcccgttgaaaatcttagcccacagcaaatcacaatgtttccccatgt +gattattgatgttagaactttggaacctgtcctgttaccactccctgatgttagaaataatttctttcatta +taatcaaaaggatgat---cctaagatgagaattgtggctatgctctatactcccctcagatcaaatggttc +tggtgatgatgtattcacagtttcttgtagagtgttaactaggccctcccctgatttcgattttacgtattt +ggtgccaccaacggtggaatccaaaacaaagccattcacactcccaatcctcacattaggggagatgtccaa +ttcaaga---tttccagtgcctatagatcaaatgtacactagccctaatgaagttatttctgtgcaatgtca +gaatggcaggtgcacactggacggggagctccaagggacaacccagctccaggtcagtggtatttgcgcatt +caagg-----------------------------------------gacaagtgaccgccc----------- +-----------acctacag--g------acaatgaac----------------------------------- +----------atc----------------------------------tttacaat----------------- +----------------gtcaccatcacaaatttgaatgggtccccttttgacccctctgaggacatccccgc +tcccctgggtgttcccgactttgaagggagggttttcggtgtcatcagccaaagagataa------------ +-----ttacaattttgg--tggacaaaaccagcctgcaaatagg-----------tctcatgatgctgtggt +cccaacttacacagctcaatatactccaaaattgggtcaaattcaaattggca---------cgtggcagac +tgatgatat---aacagtcgaccagcctgcta---------------------------aattcaccccag- +--------ttgg------ccttagtga------------cacagaccactttaaccaatgggtggttcccag +gtatgctggtgca-ttaaat------ttgaacacaaatcttgccccttccgttgcaccggtgttcccaggag +agcggttgcttttctttagatcatacatcccc-------cttaaaggtggttt-----tggta--------- +--acccagccattgattgcctggtgccacaggagtggatacagcacttctaccaagaagctgctccctcact +gagtgaggtcgcccttgtcaggtatatcaatccggacactggtcgggcactgtttgaggccaagctccatag +ggctggcttcatgacagtctcgagtaacaccagtgccccggtggttgtacctgccaatgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactggcaatgggcgtaga---------ag +gattc---------aataatggctggtgcttttattgctggtttagcaggagacgtgctcagcaatgggctc +ggctcattaatcaatgcagg---tgctaatgtaattaatcagagagcagaatttgattttaatcaacag--- +------------------------------ttacaacaaaattcttttaatcatgataaggagatgttgcag +gctcaaatacaggcaaccaagcagctgcaggctgacatgatggctataaagcagggggtgttgactgctggc +ggcttctcccccgctgatgcagccaggggcgctgtaaatgcgcccatgacacaagcactagattggaatggc +acaaggtactgggcaccaagttccatgagaacaacatcctattccggaagattcacatcaacc--------- +ac-------------tccaataagacagg----ctgat---------------------------------t +tt-------------------------caacacacccaaacccggccttcaagtggttcttccgtggcctcc +tactccacacagtcctc--aag--------------------------accaacctcaataacaactgcg-- +-gggtctt--------------------------------caaccacgtccaactcga-------------- +----------c-----------ccgcagtac------aaatctccc---------------------ctcga +cagtttc--------ta---------------------------------ggg------------------c +cacctc---------------------------------------tagaactagtgagtgggttagagacca +aaataggaatttggaaccctacatgc---gtggtgccttacaaacagcctttgtcacaccaccttctagcag +ggcatct---gat---------------------------------ggga---cggtctcaaccgttcccaa +gggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggaaa-------- +-------att-tta--------------------aaat-g--------at-ttga-------------ttt- +--------------gcc---ttt------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305602.1/1-7508 |Norovirus GII isolate Arg4237 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaatgacgccaccccttctaacaaagaagaggc------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggtaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttattg +gaggcccgtttataccccca---attatttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgctgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggattcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctgttaggcaaactcaagccattgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgttcccgtggttatgggtggtataggaatggttctcggttttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggagaaggccaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaagagat +gttcagcaggatcagaccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggacgcctacaggggagagagggtggtcctgtgggacgactatggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaagccagacttttcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atggggtcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatctcaaagttg +cattgagggatgtgaaattcaatgagtgtgaaataatttataagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccaggtattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggttcaagata---gatgggaaattgagcccaaggatacaggaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgagaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggttcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccaagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaagcaaattcaagttcataagtctggagagttttgcaggtttaggttcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagagggcactgtttgttctatactcataaaa +aggcccacaggtgagatgattcccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccctacatctacaaacgtggcaatgacattgttgtcgcgggtgtccataccgcagca +gcccggggaggcaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggtacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagacccc +agagtggaaaaagggccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggctagttgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcggaagaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgcaggtcgattgctcgggacccagctggttggtttggaaaattggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatctagctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcggacaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattctcctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctaccttgctcatctggcccgtatgtacaa +tgggcacgctggtggtatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagtcctactacctatgccagatatcagaaataacttcttccatta +caatcagggcaatgat---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +agttccccccacggttgaatccaagaccaagcagtttacattgcccatcctcaagatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgaactattaggcaccacacccttattggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactttttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---actctt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctattctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggtttatcaacccagacactggcagagtcctctttgaggccaaactgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgttgacagccgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggcgccatgaggacaacaggttattcagggacttttactcacttaccccctatg +ca-----------gtctgctccatatgtta-----------ata---------------------------a +tcaaaaca--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagatccttctcttcc---------------- +---ctctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-gggaaagtttgattagtttgttcttcttttc------ta-ctatccct---ttaatttttc +t------------ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305603.1/1-7509 |Norovirus GII isolate Arg4238 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaatgacgccaccccttctaacaaagaagaggc------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggtaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttattg +gaggcccgtttataccccca---attatttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgctgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggattcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctgttaggcaaactcaagccattgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgttcccgtggttatgggtggtataggaatggttctcggttttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggagaaggccaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaagagat +gttcagcaggatcagaccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggacgcctacaggggagagagggtggtcctgtgggacgactatggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaagccagacttttcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atggggtcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatctcaaagttg +cattgagggatgtgaaattcaatgagtgtgaaataatttataagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccaggtattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggttcaagata---gatgggaaattgagcccaaggatacaggaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgagaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggttcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccaagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaagcaaattcaagttcataagtctggagagttttgcaggtttaggttcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagagggcactgtttgttctatactcataaaa +aggcccacaggtgagatgattcccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccctacatctacaaacgtggcaatgacattgttgtcgcgggtgtccataccgcagca +gcccggggaggcaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggtacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagacccc +agagtggaaaaagggccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggctagttgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcggaagaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgcaggtcgattgctcgggacccagctggttggtttggaaaattggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatctagctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcggacaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattctcctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctaccttgctcatctggcccgtatgtacaa +tgggcacgctggtggtatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagtcctactacctatgccagatatcagaaataacttcttccatta +caatcagggcaatgat---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +agttccccccacggttgaatccaagaccaagcagtttacattgcccatcctcaagatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgaactattaggcaccacacccttattggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactttttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---actctt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctattctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggtttatcaacccagacactggcagagtcctctttgaggccaaactgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgttgacagccgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggcgccatgaggacaacaggttattcagggacttttactcacttaccccctatg +ca-----------gtctgctccatatgtta-----------ata---------------------------a +tcaaaaca--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagatccttctcttcc---------------- +---ctctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-gggaaagtttgattagtttgttcttcttttc------ta-ctatccct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305604.1/1-7483 |Norovirus GII isolate PNV009912 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gattgttttctaacgt +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +atctctaa---------------accgccaagaccgccaacaccggaattggtg-------aagataatacc +ccc-----------------------------acccccatccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtctgggctgcctgacttaacaacagtcacgcagcc +tgatgcacgatgtacagcctatagcgtccccccgctcagtcaaagagaggcgggtgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctatcattatgggttgtacgtggagcgtggccttgt +gcttggggtgcacaaaccacccgctgcgataagcttcgctaaaattgagttaacaccattgtctctttattg +gagggttgtttacacccccc---agtacttaatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttttggaccttaatgattcttggct +cag---caggagaatgattcaaaggaccactggtttcttcaggccttaccaggagtggaacagaaagccatt +accaaccatggacgagcccaagatcaagaaagttgcaaacgctgtcctatgtgctctctcttcactcttcac +cagacccattaaagacatcatcggcaagctaaaaccaatgaacatccttaacatactggcaacttgtgactg +gacatttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgatcgctcccttgctcggtgatttcgaaatgcagggccctgaagatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacactcagggcttgtaaagatctaggggcttatggattggaaatactcaaattagt +tatgaaatggttcttccctaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagaccttgaggcaatagaaaacaaccatatgaccactcttctcaaggacaaagacagtcttgccacata +catgagaaccctcgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaaggattgcagcagcccggtcactagtccacaaagcaaaagaagagct +gtcaagcagacaaaggcctgttgtcgttatgatatctggcaggccgggcatagggaaaactcacctagccag +agagctggccaagaaagttgcatcaacactggcaggtgaccaaaggattggcctggtgcccaggaatggtgt +ggaccattgggatgcctataaaggagaaagagtggtgctgtgggacgactatggcatgagcaaccccataca +ggatgccctaagactccaagaactggctgatacctgccctctaacacttaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagcgatgccataataataacaaccaacctctcaaatccagcacccttagactatgt +taacttcgaggcctg-ctccagacgcatagacttcttagtatatgcagatgcaccagatattgagaaggcca +aacgagatttccctggccagccagacatgtggaaagaccattacagaccagacttctcacacatcaagctcc +aactggccccacagggcggttttgacaagaacggcaacaccccacacggtaagggtgtgatgaagtccttga +ctgttgggtcattgatcgccagagcctctggcctgctccatgaaagaatggatgaatttgagctacagggcc +ctggtctgtcaactttcaactttgaccgcaacaaggtcgctgcctttagacaactggcagctgaaaataagt +atggcatgttggacacactgagagtaggaaaccagctaaagggtgtcaaaaccatggatgagctgaagcgag +ccatcaataacatcaccatcaagaagtgcttgatagtgtataatggatgcacctacactatggaatctgatg +gacgtggtaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaatgagctcgcgggggccc +tgcaccacctcaggtctgcaagaataagatactatgtcaagtgtttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgcatga------atatctcaaacctatggt +cgaagccacctgctgaagacaacgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgtcgattccaaagacatcaaagtggaaggaaagaaaggcaagaaca +aatctgggagaggaaagaaacacacagctttctccagcaagggtctcagtgatgaagaatatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaagagtatctccaagatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggccaaaatccgccaga +ggatcttccgtcctaccaggaaacaacggaaggaggagagagccaccctcggactcgtcacggggtcagaaa +tcaggaagaggaacccggatgacttcaaaccaagaggaaaactgtgggctgatgatgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagttaattttggttcaggctggg +ggttctgggtgtccc-caagccttttcataacctcaacccacgtgataccgaaggggatcacggaggctttt +ggtgtgcccatcaatcaaatacaaattcataagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttagaagaaggtgcccctgagggaaccgtcgcaaccatccttgtcaaa +cggccgacaggggagttgatgcccttggctgctagaatgggaacccatgccacaatgaggatccaagggaga +atggtgggtggtcagatgggcatgttgctcaccggctcaaacgccaagggcatggacctcggcacaacacca +ggtgattgtgggtgcccttacatatacaagagaggcaacgactttgtggtcatcggcgtacacaccgcagca +gcacgtggaggcaacacagtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggagac +aacaagggtacttactgtggagcccctatcctgggtcctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggagatcttccaatgcaccactcccaccaggcacctatgagccagcgtacctaggtggaaaagaccca +cgagtgaaagggggtccgtccttgcaacaagtcatgagagatcagctcaagcctttcactgaacccagaggg +aaaccaccaaacccaagtattctggaatctgcaaagagaaccatcatcaacgttttggaacaaactattgac +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacttccagcggttacccacat +catgttcgcaagaatgactactggagtggtgagacattcacaggtaaactggcagatcaagcttcaaaggca +aatcttatgtatgaagaaggaaaacacatgacaccggtgtacaccgcggccctcaaggatgaactagttaaa +actgacaaaatctatggtaagatcaagaagaggctactgtggggttctgacctttccaccatgatccgatgt +gctagggcattcggtggcctcatggaagaactcaaagcacactgcatcacccttcctgtcagagttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacaactaccattatgatgcagattac +t-cccgttgggattccacacaacaacgggcggtgcttgcgtcagcacttgaaatcatgg-tgagattttctg +ctgagccacaatt-ggcgcaaatagtggctgaggacctgctttcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgagggccttccatccggcgtgccatgcacgtcccagtggaactcaatctcccactgg +ttgctcacattgtgtgccttatctgaggtgacaggactaggtcccgacatcatacaggccaactccatgtac +tctttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaagttaactgcaaagctc +agagagtatggcctcaagcccactcgtcctgacaaaactgaggggccattggtgattagtgaagacttaaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctct +atcctcaggcaattgtattggacaaaaggacccaaccatgaagaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactaggagaatcctccctacatggaccctcattttacagcaaagtt +agtaaattggttatatctgaacttaaggaaggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctagaaccagtggctggtgcagctcttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtttcacctaggaattccccagg +agaaattctcctaaatttagaattaggtcctgacttaaatccctatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcagggaatgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaattttccagtcgaattcttaagtcctgcccaaattactatgctcccacattt +gatagttgacgtcaggacccttgaaccaattatgatacccctccccgacgtgagaaacaccttcttccatta +caacaataggccctct---gagcgtatgcgtttggtggccatgttgtacacacccctgagatccaacggctc +aggtgatgatgtcttcacagtctcatgtagagtgttaactagacccactccagattttgaattcacctacct +agttccaccctcagtagagtctaagacaaagcctttctctcttcccatcttaaccatttctgaattgactaa +ttcaagg---tttccagcacccattgattcattgtttaccgcccaaaataacaatcttaatgtccaatgtca +aaatggtcggtgcacactagatggtgagttgcagggaaccacccagctgctcccaactggaatatgtgcctt +cagag-----------------------------------------ggaaaatatcagcag----------- +-----------atgtgcaaa------------g---------------------------------ca---- +-------gccacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggcaccccatttgatccaacagatgatgtcccagc +tccgcttggcactcctgacttcacaggtctactgtttggagttgcaagccaaa---gaaacgttggt----- +------------ggaacaggtaacaacaccacc--------agg-----------gcccacgaggtagtgat +agcaacaactagtacacaatttgtgccaaaactgggttctattaattttggg------------agtgaaag +tgacgattt---tcaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgaaaccg---------ggcatcctttcagacaatgggacctacctaa +ctattctggagca-ctgacc------ctcaacatgaaccttgctccacctgttgccccaaacttcccaggtg +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------tagtg--------- +--agggtattattgactgcctgctgcctcaagagtggatacaacatttctaccaggagtccgctccatccca +atcagatgtggcactgatcagatatgtcaaccctgacacgggccgcactctctttgaggcaaaactccacag +gactggttacattactgttgctcactctggtgattatcctcttgttgttccttctaatggctattttaggtt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcacctctgctgta +ggctcactggcaaatgctgg---agcaaatgccataacacagaaaattgactttgaaaacaacaaacaa--- +------------------------------cttcaagcagcctcctttcaacatgataaagatatgctccgc +gcacaagtggatgcaactaagcagctgcaggcagaaatgattgccatcaaacaggggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggagcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttactccgggcagttcacatcgacg--------- +cc--------------tgtgcacacaccaaattttaac---------------------------------a +gt----a----------------aacccaggcctcc---tgccaa--------------------------- +------------------------------aaccc------cttcttcttcttctggt------------ag +c--gttta-----------tagtc------------tt-------tcaacccaatcaacttcactc---c-- +----------ctggac-----cctcttcttcaggttcatctgtttcttctgtctcaactcaatcaacaaaat +tgagttc--------------------------------------agtttctt------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gaacctcagcccttacatga---gcggggcccttaatatttctcatgtgacacctccatcaagcag +ggcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tagttt---taat--tg-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305605.1/1-7509 |Norovirus GII isolate Arg4379 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaacgacgccaccccttctaacaaagaagaggc------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggtaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttattg +gaggcccgtttataccccca---attatttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgctgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggattcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggttcgctgttttc +aaaaccaattaaagatctgttaggcaaactcaagccattgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccgcc +agatgtctctaattttgtggcctccctgataggtgattttgagttgcaagggcctgaggacctggctgtgga +gctcgttcccgtggttatgggtggtgtaggaatggttctcggttttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggagaaggccaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaagccaaagaagagat +gttcagcaggatcagaccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggacgcctacaggggagagagggtggtcctgtgggacgactatggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaagccagacttttcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatctcaaagttg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttggcaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccaggtattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggttcaagata---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgagaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccaagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaagcaaattcaagttcataagtctggagagttttgcaggtttaggttcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggtgccccagagggcactgtttgttctatactcataaaa +aggcccacaggtgagatgattcccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccctacatctacaaacgtggcaatgacattgttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgcgccacccaagggcaagatggggaagcaatccttgagggaaatgag +gaccttggtacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagacccc +agagtggaaaaagggccctccctgcagcaagttatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatttacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggctagttgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcggaagaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgcaggtcgattgctcgggacccagctggttggtttggaaaattggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatctagctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacagaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattctcctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctaccttgctcatctggcccgtatgtacaa +tgggcacgctggtggtatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgagaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgtcagacaattagaaccagtcctattacctatgccagatatcagaaataacttcttccatta +caatcagggcaatgat---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +ggttccccccacggttgaatccaagactaagcagtttacattgcccatcctcaagatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagctaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgaactactaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactttttggcgttgctagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccacgaagccaacat +taacactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggcgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---actctt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctattctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggtttatcaacccagacactggcagagttctctttgaggccaaactgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------agtaatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgttgacagccgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggcgccatgaggacaacaggttactcagggacttttactcacttaccccctatg +ca-----------gtctgctccatatgtta-----------ata---------------------------a +tcaaaaca--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ctctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------ccagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-tggaaagtttgattagtttgttcttcttttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305606.1/1-7468 |Norovirus GII isolate Arg4416 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------agtaacgacgccaccccttctaacaaagaagaggc------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggtaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttattg +gaggcccgtttataccccca---attatttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgctgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggattcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctgttaggcaaactcaagccattgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgttcccgtggttatgggtggtataggaatggttctcggttttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggagaaggccaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaagagat +gttcagcaggatcagaccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggacgcctacaggggagagagggtggtcctgtgggacgactatggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaagccagacttttcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atggggtcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatctcaaagttg +cattgagggatgtgaaattcaatgagtgtgaaataatttataagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccaggtattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggttcaagata---gatgggaaattgagcccaaggatacaggaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgagaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggttcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccaagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaagcaaattcaagttcataagtctggagagttttgcaggtttaggttcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagagggcactgtttgttctatactcataaaa +aggcccacaggtgagatgattcccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccctacatctacaaacgtggcaatgacattgttgtcgcgggtgtccataccgcagca +gcccggggaggcaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggtacctactgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagacccc +agagtggaaaaagggccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggctagttgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcggaagaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgcaggtcgattgctcgggacccagctggttggtttggaaaattggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatctagctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcggacaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattctcctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctaccttgctcatctggcccgtatgtacaa +tgggcacgctggtggtatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacaattagaaccagtcctactacctatgccagatatcagaaataacttcttccatta +caatcagggcaatgat---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +agttccccccacggttgaatccaagaccaagcagtttacattgcccatcctcaagatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgaactattaggcaccacacccttattggctgtcaacatctgcaaatt +caagg-----------------------------------------gagaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactttttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---actctt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aataacacccacttggctccagcagtggcccctctattcccaggtg +agcagattctattctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggtttatcaacccagacactggcagagtcctctttgaggccaaactgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgttgacagccgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcacctggcgccatgaggacaacaggttattcagggacttttactcacttaccccctatg +ca-----------gtctgctccatatgtta-----------ata---------------------------a +tcaaaaca--------------gacaacttcttaaag----------------------------------- +----------------------------------------tagatccttctcttcc---------------- +---ctctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaaggttgagccccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-gggaaagtttgattagtttgttcttcttttc------ta-ctatccct---tta------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305607.1/1-7507 |Norovirus GII isolate Arg4446 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgttttccaacat +ggctgtcactttcaaacgag----ccctcggggcgcggcccaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaactggtc-------aaaaatatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcctacagcg----------ccaa---aggtggcgtttccggcctgcctgaacttaccactgtcagacaacc +ggaagaaaacaacacggcgttcagtgttcccccactcaaccagagggagagtagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatataccattacggtctgtacgtggaaaaaggtctcat +acttggtgtgcataagccacctgcagccatcagccttgccaaggttgagctaacaccactttctctgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagactgcacggagaatcatt +cccctacacagcatttgacaataattgctacgccttctgttgttgggtgttggacctaaacgattcatggct +aag---taggaggatgatccagagaacaacaggtttcttcagaccatatcaagactggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgtactctgtcttcgctattcac +cagacccatcaaggacataatagggaagctaaaacctcttaacatcctcaatattttggccacatgtgattg +gaccttcgcaggcatagtggaatccctaatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattacgagctgcaaggacctgaggacctcgcagtaga +actcgtcccagtagtgatgggggggataggtttggtgctaggattcaccaaagagaaaattgggaagatgtt +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagttggccatggtgagagccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaatgctcttctggcaaggatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccaagacctgttgttgtgatgatatcgggaaaaccaggaatagggaaaactcaccttgccag +ggaactggctaagaagatcgcggcttccctcacaggggaccaacgtgtgggtctcataccgcgcaatggtgt +tgaccattgggacgcatacaagggagaaagggtggtcctatgggatgactacggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgtcccctcacgctgaactgtgacaggattgagaacaa +aggaaaagtttttgacagtgatgctataattatcaccaccaatctggccaacccagcaccactagattatgt +caactttgaagcgtg-ttcgaggcgcattgacttcctcgtgtacgcagatgctcctgatgtagagaaggcaa +aacgcgacttcccaggccagcccgacatgtggaagaacgctttcagtcccgacttctcacacataaaactgt +cactggccccacagggtggcttcgataagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgagttacagggcc +cgcctctcaccactttcaactttgaccgcaataaggtccttgctttcagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaagcaag +ctctcaaaaatgtctcgatcaagaagtgtcaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtaatgtgaaggttgacaaagtacaaagtgccaccgtgcaaaccaacaatgaactaactggtgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggcactgtattccatcatcc +aaattgctggggctgcgttcgtcaccgcgcgcatcactaagcgcatga------atatacagaatctctggt +ccaagccacaggtagaagacacagagga--------gacggccaacaaagaaggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcatttcatccgacgatataaaaactgagggtaagaaagggaagaaca +agactggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaaggatcagagatgaaaggaatggtaagtattccatagaagagtaccttcaggacagagaaaagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagccaaaatccggcaga +ggattttcaggccaacaaggaaacaacgcaaagaagagagggcctctcttggtttagtcacaggatctgaga +tcaggaaaagaaacccagaagacttcaaacccaagggaaaactgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaattttgaagctccaccaagcatctggtcgcggatagtcaattttggctcgggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccaaggtgcaaaagagttcttc +ggaacccccatcaaacaaattcagatacacaaatcaggcgaattctgccgattgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagagggtgcacccgaagggaccgtggtcacactactaatcaag +aggccaactggagaactcatgcctctggcagctagaatggggacccatgcaaccatgaggattcaagggcgc +acagttggggggcaaatgggcatgcttctgacagggtccaacgccaaaagtatggacctaggcacaacaccg +ggtgactgtggctgtccctacatctacaaaaggggaaatgactacgtggtcattggagtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggtggtgac +aacaagggaacctactgtggtgcgccaatcttgggtccaggaagtgccccaaaactcagtaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccatttacagaacccaggggc +aagccgccaagaccaagtgtgttggaagctgccaagaagaccatcatcaatgttcttgagcaaacaattgac +ccaccccagaaatggtcattcgcacaggcttgcgcgtcccttgacaagaccacctccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggactcctttacaggcaaattggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattggtcaaa +actgataaaatttatggcaagatcaagaagaggctcctgtggggctcagacctggcgaccatgatccggtgc +gctcgagcctttggaggccttatggatgaacttaaggcacactgtgttacgcttcctgttagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcactccagatataaatttcactatgatgctgattat +t-cccggtgggactcaacacaacaaagagatgtgctagcggcagccctagaaatcatgg-tcaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctctcccccagtgtaatggatgtgggtgatttt +caaatctcaataagtgaggggctcccctccggggtgccttgcacctcccaatggaattccattgcccattgg +ctcctcactctttgcgcactctctgaagtcacggacctgtcccctgacatcattcaggccaattcccttttc +tccttttatggtgatgatgagattgtgagcacagacataaagttggacccagagaaactgacagcaaaactc +aaagagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcttacggagaactgtgacccgtgacccagctggctggtttggaaaactggagcagagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcgttttatagcaaagtt +agcaagttagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcacaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccagtggcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagtttacagtctcacccagaaactctcctgg +agaaattctcttaaatctggaattgggtcctgatttgaatccgtatttggcacatctatctagaatgtataa +tgggtatgctggtggcgtagaagttcaagtcctcctagcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgttccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacctatcatgataccactcccagatgtcaggaacaccttcttccatta +caacaatcaacctgcc---aatcgcatgcgattggtggccatgctgtatacccccttgagatctaatggttc +tggtgatgatgtcttcacagtgtcatgtagagtgctaactaggcccaccccagattttgagtttacatattt +ggtccccccttcggtagagtccaagaccaagcccttttctctgcccatattgaccatttctgaattgaccaa +ctcaaga---ttccctgtaccggtggattcattgttcacagcccaaaacaacaatctcaatgtccagtgtca +aaatggtcgttgcacactggatggtgagttgcagggaaccactcagttacaaccatcaggcatctgcgcctt +tagag-----------------------------------------gcaaaataacggcagatgtgc----- +----accagagccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcac----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgatccaacagaggatgtgccagc +tccactgggcactccagacttcacaggccttctctacggagttgcgagccaaa---ggaatg---------- +-----tt-----caacccaacccaaacaccacc--------agg-----------gcacatgaagctgtgat +ctccacaaccagttcgcagttcgtgccaaagttagggtcaatcaactttggta------------gcacaag +tgaagactt---cgtcgtgggccaacccacca---------------------------aattcacaccag- +--------ttggtatt---aagattgagactggac---------atgatttcgatcaatggaccctacctag +atattcaggccat-ttgaca------ctcaatatgaaccttgccccacccgttgctccaaatttccctggtg +aacagttacttttcttcagatcaaacgtcccct------gtgccggtggcgt------cagtg--------- +--atggcatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatatgtcaaccctgacacgggtcgcacactctttgaggcgaaactccacag +aacgggctacatcactgttgctcattcaggtgactatccccttgttgtcccctccaatggatatttcagatt +tgattcttgggtgaaccagttttactcactcgcccccatgggaactgggaatgggcgcagg---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacacgctcaccaacacagtt +ggttcactggtgaacgccgg---ggccaatgctatcacccaaaaggtggactttgaaaataacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgaaatgatcgccatcaagcaggggatattgaccgcaggc +ggcttttcccccactgacgcggcgagaggagcagtgggtgcacccatgaccaaagtccttgattggtccggt +actcgttactgggctccaaattccacgcggacaactggctattcagggcagttcacatcaaca--------- +cccgtgcatatgcccacaaagataactcagcctgctcc---------------------------------t +gcaaaaa----------------ggactcaacccccttcttcctcttcag---------------------- +---------------gt--agcatttatagtctttcaacacagagtactgttttgaccaagccttcttcagg +ctcctctt-----------ctgtt------------tcttctgcttttacacaatctacaca---------- +----------------------------------------------------------------------at +tgagttc--------aattcctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagcccctacatga---gtggtgcacttaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------caggaa---cagtctcaactgtacccaa +agaagttttgga-ctcctggacatctgcat------------tcaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaac--------- +---c-a-a-t-taattt---taa---tt------agt-tgtgattga-at-tcaa------------aatt- +---------------gg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305608.1/1-7512 |Norovirus GII isolate Arg4452 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacaacgtaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgagggacaagccacca +aga---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------tcag---agagggtgtctctggtttgcctgaactctcaacggtcacccaacc +ggaagagagttctacggcattcagtgtcccccctcttagtcagagggagagcagagatgcaaaggaaccctt +gactggaaccatcctggagatgtgggacggggagatctaccattacggcttgtacgtggaacgaggactagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaggaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgctgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttctttcgaccctaccaggactggaacagaaaacccct +ccccacggtggatgactccaaagtgaagaaggtggccaatgttgtcctctgtgctctctcctcattgtttac +tagaccaattaaggatattattggaaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatcactgatcctcttggctgagttgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggtaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggctggagatcctcaagttggt +catgaaatggtttttcccaaagaaagacgagacaaacgaattggctatggtgagatccatcgaggatgcagt +attagacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggatagccttgcaaccta +catgaggactcttgacttggaagaggagaaggcgaggaagttgtccaccaagtctgcctcaccggacatcgt +gggcacgatcaacgccctgctgtcaaggattgcagctgcccggtctctagtacacagggctaaggaggaact +gtcaagcaggccccgaccggttgttgtgatgatttcagggagaccaggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggccttatcccacgcaacggagt +tgaccactgggatgcgtacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgcccttagactccaggagctcgctgatacctgtcccctcacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataactaccaatttagctaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagatatgtggaaagacaccttcaaacctgacttctcacacataaaactga +cactagccccacaaggaggttttgacaagaatggcaacacccctcatgggaagggtgtcatgaagaccctca +ctgctagttctctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgtaacaaggtgcttgcttttaggcaacttgctgctgagaacaagt +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggggcacgtacacacttgaatctgatg +gtaaaggcaatgtgcatgtcgagaaggtgaagaacaccagtgtgcaaactaataacgagctctccggggctt +tgcaccatctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaaatggaagatctggagga--------gactagcaacgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +aaactggccgtggtaagaagcacacagccttttccagcaaaggcctcagcgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaaccgaggaagatttctgtgaagaagaggaggctaaaatccggcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctctcggtttggtcacaggctctgaga +tcaggaagagaaacccagatgattttaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaactcagctttgaggctccaccaagcatttggtcacgaatagtcaactttggttcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccacggcgcacaggagttcttt +ggagtacccatcaaacagatacaaattcacaaatcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacgggcatgatcctggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccatgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgccaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatatacaaaagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtaatctgtgcaacccagggaagcgagggtgaggccatgctcgaaggtggtgat +agcaaaggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctaccacccggaacctatgaaccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagggatcaactaaaaccattcactgagcccagaggc +aagccacccaaaccaagtgtactagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcgcaggcgtgtgcatcactagacaaaaccacttccagcggacaccctcac +cacatacggaagaacgagtgctggaacggggagactttcacaggaaaactggcagaccaagcatcaagggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggatgagctagtcaag +actgataagatctatgggagtatcaaaaagagactcctgtgggggtcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagatatcattatgatgcagattac +t-cccgctgggattcaacacaacaaagagcagtgctggctgcagctttggaaataatgg-tcaaattctcat +cagagcctcatct-ggctcaagtggttgcagaagacctcttgtccccaagtgtgatggatgtgggtgatttc +aagatatcaatcaacgaggggttgccctctggtgtaccttgcacctcacaatggaactccattgcccactgg +ctcctgacactatgtgcgctgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagaaaaattgacaacgaaattg +aaggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactgggtgaagctgcattgcatggcccatcattctacagtaaaatt +agcaagctggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagacccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaattttccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaacctcccgatgcctgacgttcgcaacaacttcttccatta +caatcaagggtctgat---tcgagattgcgcttaattgcaatgctgtatacacctcttagggcaaataattc +tggtgatgatgtttttactgtgtcttgtagagtattgactaggcctagccctgatttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcactctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcataccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccacccaactcttacccagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgatcaggccgacacggcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccctatgatcctgcagaagacataccagg +ccccctaggaacgccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----cc------------ccgacagcacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgtttcaccccaaaactaggctcattagagatatcc------------actgagtc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacaa------------tgaagcggacttccaacaatggtctttgcccga +ctattctggtcag-ttcacc------cataacatgaacttagccccagctgtttctcctaacttccctggtg +agcagctcctcttcttccgctcacagttaccat------cctctggtgggcga-----tcca---------- +--acggagttctagactgcctggtccctcaagagtgggttcagcacttctaccaagaatcggcccccgctca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtattatttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccctccaaatggatattttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatatttacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaaaagttgatttcgagaacaataaatat--- +------------------------------ttacaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatggg +acgaggtactgggcaccaaatgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +gg-------------cagcgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gtaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaattac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggttta--------------------------------cagtagttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaatttcaatttggaaccacacatgc---ctgggtctcttagaacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggta---cggtctcgaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-tt-aaattggatttga-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305609.1/1-7520 |Norovirus GII isolate Arg4521 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gattgttttctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +atctctaa---------------accgccaagaccgccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtctgggctgcctgacttaacaactgtcacgcagcc +tgatgcacaatgtacagcctatagcgtccccccgctcagtcaaagagaggcgggtgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctatcattatgggctgtacgtggagcgtggccacgt +gcttggggtacacaaaccacccgctgcgataagcctcgctaaaattgagttaacaccattgtctctttattg +gagggtggtttacacccccc---agtacttgatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttttggacctcaatgattcttggct +cag---caggagaatgatccaaaggaccactggtttcttcaggccttaccaggagtggaacagaaagccctt +accaaccatggacgagcccaagatcaagaaagttgcaaacgccgtcctatgtgctctctcttcactcttcac +cagacccattaaagacatcatcggcaagctaaaaccaatgaacatccttaacatactggcaacttgtgactg +gacctttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgatcgctcccttgctcggtgattttgaaatgcagggccctgaggatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacactcagggcttgcaaagatctaggggcttatggattggaaatactcaaattagt +tatgaaatggttctttcctaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagacctggaggcaatagaaaacaaccatatgaccactctcctcaaggacaaagacagtcttgccacata +catgagaaccctcgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaaggattgcagcagctcggtcactagtccacaaagcaaaagaagagct +gtcaagcagacaaaggcctgttgtcgttatgatatctggcaggccgggcatagggaaaactcaccttgccag +agagctggccaagaaagttgcaacaacactggcaggtgaccaaaggattggcctggtgcccaggaatggtgt +ggaccattgggacgcctacaaaggagaaagagtggtgctgtgggacgactatggcatgagcaaccccataca +ggatgccctaagactccaagaactggctgacacctgtcctctaacacttaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagcgatgccataataataacaaccaacctctcaaatccagcacccttagactatgt +taactttgaggcctg-ctccaggcgcatagacttcttagtgtatgcagatgcaccagatattgagaaggcca +agcgagatttccctggccagccagacatgtggaaagaccattacagaccagacttctcacacatcaagctcc +aactggccccacagggcggttttgacaagaacggcaacaccccacacggtaagggtgtgatgaagtccttga +ctgttgggtcactgatcgccagagcctctggcctgctccatgaaagaatggatgaatttgagctacagggtc +ctggtctgtcaactttcaactttgaccgtaacaaggtcgctgcctttagacaactggcagctgaaaataagt +atggcatgttggacacactgagagtgggaaaccagctaaagggtgtcaaaaccatggatgagttgaaacgag +ccatcaataacatcaccatcaaaaagtgccagatagtatataatggatgcacctacactatggaatctgatg +gacgtggcaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaatgagctctcgggggccc +tgcaccacctcaggtctgcaagaataagatactatgtcaagtgcttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgaatga------acatctcaaacctatggt +cgaagccacctgctgaagacaatgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgttgattccaaagacatcaaagtggaaggaaagaaaggcaagaaca +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagaatatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaagagtacctccaagatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggccaaaatccgccaga +ggatcttccgtcctaccaggaaacaacggaaggaggagagagccactctcggactcgtcacggggtcagaaa +tcaggaagaggaacccggatgacttcaaaccaagaggaaaactgtgggctgatgacgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagttaattttggttcaggctggg +ggttctgggtgtcct-caagcctttttataacctcaacccacgtgataccgaaggggatcacggaggctttt +ggtgtgcccatcaatcaaatacaaattcacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttggaggaaggtgcccctgagggaaccgtcgcaaccatccttgtcaaa +cggccgacaggggagttgatgcccttggctgctagaatgggaacccatgccacaatgaagatccaagggaga +atggtgggtggccagatgggcatgttgctcaccggctcaaacgccaagagcatggacctcggcacaacacca +ggtgattgtgggtgcccttacatatacaagagaggcaacgactttgtggtcatcggcgtacacaccgcagca +gcacgcggaggcaacacagtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggagac +aacaagggtacttactgtggagcccctatcctgggtcctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggagatcttccaatgcaccactcccaccaggtacctatgagccagcatacctaggtggaaaagaccca +cgagtgaagggaggtccgtccttgcaacaagtcatgagagaccagctcaagcctttcactgaacccagaggg +aaaccaccaaacccaagtgttctggaatcggcaaagagaaccatcatcaacgttttggaacaaactattgac +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacttccagcggttacccacat +catgttcgcaagaatgactactggagtggtgagacattcacaggcaaactggcagatcaagcttcaaaggca +aatcttatgtatgaggaaggaaaacacatgacaccggtgtacaccgcggccctcaaggatgaactggttaaa +actgacaaaatctatggtaatatcaagaagaggctactgtggggttctgacctttccaccatgatccgatgt +gctagggcattcggtggcctcatggatgaactcaaggcacactgcatcacccttcctgtcagagttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacaactaccattatgatgcagactac +t-cccgttgggattctacacaacaacgggcggtgcttgcagcagcacttgaaattatgg-tgagattttctg +ctgagccacaatt-ggcgcagatagtggctgaggacctgctttcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgagggccttccatccggcgtgccttgcacgtcccagtggaactcaatctcccactgg +ttgctcacattgtgtgccttatctgaagtgacaggactaggtcctgacatcatacaggccaactccatgtac +tctttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaaattaactgcaaaactc +aaagaatatggcctcaagcccactcgtcctgacaaaactgagggaccattggtgattagtgaagacttgaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctct +atcctcaggcaattgtattggacaaaaggacccaaccatgacgaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactgggagaatcctccctacacggaccctcattttacagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcagctcttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtttcacctagaaattccccagg +agaagtcctcctaaatttagaattaggtcctgatttaaatccttatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcggggaacgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaatttcccagttgaattcttaagtcctgcccaaatcactatgctcccacattt +gatagttgacgtcaggacccttgagccaattatgatacccctccccgacgtgagaaacaccttcttccatta +caacaataggccctct---gagcgtatgcgtttggtggccatgttgtacacacccctgagatccaacggttc +aggtgatgatgtcttcacagtctcatgcagggtgctaactagacccactccagattttgaatttacctacct +agttccaccctcagtagagtctaagacaaagcctttctctcttcccatcttaaccatttctgaattgactaa +ttcaagg---tttccagcacccattgattcattgtttactgcccaaaataacaatcttaatgtccaatgtca +gaatggtcggtgcacactagatggtgagttgcagggaaccacccagctgctcccaactggaatatgtgcctt +cagag-----------------------------------------ggaaaatatcagcag----------- +-----------atgtgcaaa------------a---------------------------------ca---- +-------gtcacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggaaccccatttgacccaacagatgatgtcccagc +tccgcttggcacccctgacttcacaggtctactgtttggagttgcaagtcaaa---gaaacgttggt----- +------------ggaacaggtaacaacactacc--------agg-----------gcccacgaggtagtgat +agcaacaactagcacacaatttgtaccaaaattgggttctattaattttggg------------agtgaaag +tgatgattt---ccaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgagaccg---------ggcatcctttcagacaatgggacctacctaa +ctattctggagca-ctgacc------ctcaacatgaaccttgccccacctgttgccccaaacttcccaggtg +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------cagtg--------- +--agggtgtcattgactgcctactgcctcaagagtggatacaacatttctaccaggaatccgctccatctca +atcagatgtggcactgatcagatatgtcaaccctgacacgggccgcactctctttgaggcaaaactccacag +gactggttacattactgttgctcactctggtgactatcctcttgttgttccttccaatggctacttcagatt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcacctctgctgta +ggctcactggcgaatgccgg---agcaaatgccataacacagaaaattgactttgaaaacaacaaacaa--- +------------------------------cttcaaacagcctcctttcaacatgacaaagatatgctccgc +gcacaagtggatgcaaccaagcagctgcaggcagaaatgattgccatcaaacaggggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggggcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttattccgggcagttcacatcaacg--------- +cc--------------tgtgcacacaccaaatttcaac---------------------------------a +gc----a----------------aacccaggcctcc---tgccaa--------------------------- +------------------------------aacccagccttcttcttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaactcaatcaactttactc---c-- +----------ctggac-----cctcttcttcgggttcatctgtttcttctgtctcaacacaatcaacaaaat +tgagttc--------------------------------------agtttctt------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gagcctcagcccttacatga---gcggggcccttaatatttctcatgtgacacctccatcaagcag +gacttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tagttt---taat--tag---------------------------------gttaaatttt +aaattttaa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305610.1/1-7520 |Norovirus GII isolate Arg4522 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gattgttttctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +atctctaa---------------accgccaagaccgccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtctgggctgcctgacttaacaactgtcacgcagcc +tgatgcacaatgtacagcctatagcgtccccccgctcagtcaaagagaggcgggtgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctatcattatgggctgtacgtggagcgtggccacgt +gcttggggtacacaaaccacccgctgcgataagcctcgctaaaattgagttaacaccattgtctctttattg +gagggtggtttacacccccc---agtacttgatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttttggacctcaatgattcttggct +cag---caggagaatgatccaaaggaccactggtttcttcaggccttaccaggagtggaacagaaagccctt +accaaccatggacgagcccaagatcaagaaagttgcaaacgccgtcctatgtgctctctcttcactcttcac +cagacccattaaagacatcatcggcaagctaaaaccaatgaacatccttaacatactggcaacttgtgactg +gacctttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacgccccc +agatgtgtctgcgatgatcgctcccttgctcggtgattttgaaatgcagggccctgaggatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacactcagggcttgcaaagatctaggggcttatggattggaaatactcaaattagt +tatgaaatggttctttcctaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagacctggaggcaatagaaaacaaccatatgaccactctcctcaaggacaaagacagtcttgccacata +catgagaaccctcgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaaggattgcagcagctcggtcactagtccacaaagcaaaagaagagct +gtcaagcagacaaaggcctgttgtcgttatgatatctggcaggccgggcatagggaaaactcaccttgccag +agagctggccaagaaagttgcaacaacactggcaggtgaccaaaggattggcctggtgcccaggaatggtgt +ggaccattgggacgcctacaaaggagaaagagtggtgctgtgggacgactatggcatgagcaaccccataca +ggatgccctaagactccaagaactggctgacacctgtcctctaacacttaactgtgacagaattgaaaacaa +gggaaaggtgtttgatagcgatgccataataataacaaccaacctctcaaatccagcacccttagactatgt +taactttgaggcctg-ctccaggcgcatagacttcttagtgtatgcagatgcaccagatattgagaaggcca +agcgagatttccctggccagccagacatgtggaaagaccattacagaccagacttctcacacatcaagctcc +aactggccccacagggcggttttgacaagaacggcaacaccccacacggtaagggtgtgatgaagtccttga +ctgttgggtcactgatcgccagagcctctggcctgctccatgaaagaatggatgaatttgagctacagggtc +ctggtctgtcaactttcaactttgaccgtaacaaggtcgctgcctttagacaactggcagctgaaaataagt +atggcatgttggacacactgagagtgggaaaccagctaaagggtgtcaaaaccatggatgagctgaaacgag +ccatcaataacatcaccatcaaaaagtgccagatagtatatgatggatgcacctacactatggaatctgatg +gacgtggcaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaatgagctctcgggggccc +tgcaccacctcaggtctgcaagaataagatactatgtcaagtgcttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgcatga------acatctcaaacctatggt +cgaagccacctgctgaagacaatgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgttgattccaaagacatcaaagtggaaggaaagaaaggcaagaaca +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagaatatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaagagtacctccaagatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggccaaaatccgccaga +ggatcttccgtcctaccaggaaacaacggaaggaggagagagccactctcggactcgtcacggggtcagaaa +tcaggaagaggaacccggatgacttcaaaccaagaggaaaactgtgggctgatgacgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagttaattttggttcaggctggg +ggttctgggtgtcct-caagcctttttataacctcaacccacgtgataccgaaggggatcacggaggctttt +ggtgtgcccatcaatcaaatacaaattcacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttggaggaaggtgcccctgagggaaccgtcgcaaccatccttgtcaaa +cggccgacaggggagttgatgcccttggctgctagaatgggaacccatgccacaatgaagatccaagggaga +atggtgggtggccagatgggcatgttgctcaccggctcaaacgccaagagcatggacctcggcacaacacca +ggtgattgtgggtgcccttacatatacaagagaggcaacgactttgtggtcatcggcgtacacaccgcagca +gcacgcggaggcaacacagtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggagac +aacaagggtacttactgtggagcccctatcctgggtcctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggagatcttccaatgcaccactcccaccaggtacctatgagccagcatacctaggtggaaaagaccca +cgagtgaagggaggtccgtccttgcaacaagtcatgagagaccagctcaagcctttcactgaacccagaggg +aaaccaccaaacccaagtgttctggaatcggcaaagagaaccatcatcaacgttttggaacaaactattgat +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacttccagcggttacccacat +catgttcgcaagaatgactactggagtggtgagacattcacaggcaaactggcagatcaagcttcaaaggca +aatcttatgtatgaggaaggaaaacacatgacaccggtgtacaccgcggccctcaaggatgaactggttaaa +actgacaaaatctatggtaatatcaagaagaggctactgtggggttctgacctttccaccatgatccgatgt +gctagggcattcggtggcctcatggatgaactcaaggcacactgcatcacccttcctgtcagagttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacaactaccattatgatgcagactac +t-cccgttgggattctacacaacaacgggcggtgcttgcagcagcacttgaaattatgg-tgagattttctg +ctgagccacaatt-ggcgcagatagtggctgaggacctgctttcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgagggccttccatccggcgtgccttgcacgtcccagtggaactcaatctcccactgg +ttgctcacattgtgtgccttatctgaagtgacaggactaggtcctgacatcatacaggccaactccatgtac +tctttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaagttaactgcaaaactc +aaagaatatggcctcaagcccactcgtcctgacaaaactgagggaccattggtgattagtgaagacttgaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctct +atcctcaggcaattgtattggacaaaaggacccaaccatgacgaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactgggagaatcctccctacacggaccctcattttacagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcagctcttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtttcacctagaaattccccagg +agaagtcctcctaaatttagaattaggtcctgatttaaatccttatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcggggaacgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaatttcccagttgaattcttaagtcctgcccaaatcactatgctcccacattt +gatagttgacgtcaggacccttgagccaattatgatacccctccccgacgtgagaaacaccttcttccatta +caacaataggccctct---gagcgtatgcgtttggtggccatgttgtacacacccctgagatccaacggttc +aggtgatgatgtcttcacagtctcatgcagggtgctaactagacccactccagattttgaatttacctacct +agttccaccctcagtagagtctaagacaaagcctttctctcttcccatcttaaccatttctgaattgactaa +ttcaagg---tttccagcacccattgattcattgtttactgcccaaaataacaatcttaatgtccaatgtca +gaatggtcggtgcacactagatggtgagttgcagggaaccacccagctgctcccaactggaatatgtgcctt +cagag-----------------------------------------ggaaaatatcagcag----------- +-----------atgtgcaaa------------a---------------------------------ca---- +-------gtcacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggaaccccatttgacccaacagatgatgtcccagc +tccgcttggcacccctgacttcacaggtctactgtttggagttgcaagtcaaa---gaaacgttggt----- +------------ggaacaggtaacaacactacc--------agg-----------gcccacgaggtagtgat +agcaacaactagcacacaatttgtaccaaaattgggttctattaattttggg------------agtgaaag +tgatgattt---ccaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgagaccg---------ggcatcctttcagacaatgggacctacctaa +ctattctggagca-ctgacc------ctcaacatgaaccttgccccacctgttgccccaaacttcccaggtg +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------cagtg--------- +--agggtatcattgactgcctactgcctcaagagtggatacaacatttctaccaggaatccgctccatctca +atcagatgtggcactgatcagatatgtcaaccctgacacgggccgcactctctttgaggcaaaactccacag +gactggttacattactgttgctcactctggtgactatcctcttgttgttccttccaatggctacttcagatt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcacctctgctgta +ggctcactggcgaatgccgg---agcaaatgccataacacagaaaattgactttgaaaacaacaaacaa--- +------------------------------cttcaaacagcctcctttcaacatgacaaagatatgctccgc +gcacaagtggatgcaaccaagcagctgcaggcagaaatgattgccatcaaacaggggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggggcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttattccgggcagttcacatcaacg--------- +cc--------------tgtgcacacaccaaatttcaac---------------------------------a +gc----a----------------aacccaggcctcc---tgccaa--------------------------- +------------------------------aacccagccttcttcttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaactcaatcaactttactc---c-- +----------ctggac-----cctcttcttcgggttcatctgtttcttctgtctcaacacaatcaacaaaat +tgagttc--------------------------------------agtttctt------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gagcctcagcccttacatga---gcggggcccttaatatttctcatgtgacacctccatcaagcag +gacttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tagttt---taat--tag---------------------------------gttaaatttt +aaattttaa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305611.1/1-7515 |Norovirus GII isolate Arg5448 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagccaa---aactctgtcaat +g------ac----agtaacaacaccgccccttctagtaaagaagaggt------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggtgccgttcctaaggggact-------------aaaacgccc +agtagtga----------------ccagccctgccccacggttaagatcgggaccaaaacattagcagttcc +ccc-----------------------------tgagcccccgaacgg------tgaagac------accgta +cagtttgatg----------cgaagtcagaaactgtacgtgggttgccagacttaacaacggt---gcaaaa +tgaacacgaaaacacaccatacactgtccccccattgagtgagagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggtggcaaagc +cctaggggtgcacaaacccccagcagcaataagtctcgcgacgatagagctcacccccatatctctttactg +gaggcctgtttataccccca---actacctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +tccctacacagccttcagcaacaactgttacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggctaacgcgatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttgggcaaacttaaaccattaaatttgctacacttgctcgcatcatgtgattg +gacgtttgcgggcatagtggagacagttatccttatggcggaactcttc---aacatcttttggacaccacc +agatgtttccaacttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtaga +gctagtccccgtggtcatgggtggcataggaatggttctcggtttcactgctgagaagataggtcgcatgtt +gtcgtccgctgcatcaacactgcgggcatgcaaagacctgggtaattatgcccttgacatacttaagctggt +tatgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggacgccgt +actggacatggaagctatagggaacaatcaccttacaaccctcctcaaggataaggatagcctcacggcttt +catgaaaactctggacctagaagaagagaaggcaaggaagctgtctaccaagtcatcctcgccagacatcgt +cggcaccatcaatgccatactggccagaatagctgctgccaggtccctcctacataaggccaaagaagagat +gtttagcaggatcagaccggtggttgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggagagagggtagtcttgtgggatgactatggcatgggtaaccctgtcaa +ggatgctctaactctgcaagagctggccgacacctgcccagtcactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgttatcataatcacgaccaatctagtcaacccagcgcccctcgattacgt +gaacttcgaggcatg-ctccagaagggtagactttctggtctacgcagagtcaccagaaattgagaaggtca +agagagacttccccggccaacctgacatgtggaaggatcattttaagccagacttctcccacataaagctga +ctctagccccccagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctaactgcaagggttgcaggtctcgttcacgagaggagagatgagtttcagcttcaaggga +acgacctccaaacttacaactttgacaccaacagggtttccgcatttaggaagctggccgcagacaacaaat +atgggatcatggaaacaatgagagtaggtacggctctcaagaatgtcaagactttggaagatctgaaagttg +ctctgagggatgtgaagttcaatgagtgtgaaataatttacaggaattccagatatcgagtctcttccaacg +gcaaaggctctgtctctgttgataaagttgaggaccaagcatcccagactgcaaacgaggtgggttcagcac +tccttagactcaggcaggcaagggccagatactatgtcagctgctttcaagacctcgtctacactctaatac +aggttgccggagcgtcattcgttgtta---------------acagaa------tctccaagagattctgtt +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----aaagg +aggtagcccaaggta---gatgggagatcgagcccaaggacacagaaccagagggcaagaagggcaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agcgaatcagagaagaaagaaacgggaaatactccattgaggaataccttcaagaccgggatcgttac---t +atgaggaagtggcagttgcccgggcgacggaggaggacttctgtgaagaggaggaggccaaaataagacaaa +gaattttccgccccacaaagaagcaaagaaaggaagaaaggggggtgcttggtttgatcaccggttcagata +tcaggaagaggagaccagacgacttccaaccaaagggcaacctatgggcagacgacaccagaagtgtggact +acaatgaaagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccgttgggcactggctggg +gcttctgggtctcat-ccaatctcttaatcacaacaacacacgtcctgcctaaagggattaaggaacttttt +ggagttgaaatcaaacagatccaagtccataagtctggagagttttgcaggttcaggttcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttccatactcgtgaaa +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaagatacagggtagg +accgtcggtggtcagatgggaatgctcctaactggggcaaacgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccactcaagggcaagatggggaggcaatccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtcctggcaaggcgcccaagctcagcacgaagaccaaa +ttctggcgttcatcaccagacgccttgccgccaggtacctatgaacctgcctacctaggaggcaaagacccc +agagtagaaaaagggccgtccctgcagcaagtcatgagggaccagttaaaacctttcacagaaccaaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaggacagtgatgaatgttctagagcaaaccatcgac +cctgctaagccatggacctactcccaagcatgtgcctcactggataagaccacttccagtggtagcccccac +catgtcaggaaaaacgaccattggaacggggaatccttcaccggcccccttgcagatcaagcgtccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagccagtgtacacggccgcactcaaagacgagctcgtcaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgcatggccctcccatgcagggtgggaatg +aacatgaatgaagatggtcccattatatttgacaaacattctaagtacaggtaccattatgatgcagactac +t-ccaggtgggattcaactcagcaaaggagcattctctcagccgctatggaagtgatgg-tgcggttttctg +ccgagccagaact-ggcacaagtggtcgcagaggaccttttggctcccagccaactagatgttggtgatttt +atcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaactcaatagcacattgg +atcctaaccttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggcttagtccccacccgacctgacaaaactgaaggtcccctcgtaataactgaggacctcacc +ggcctaacgttcctacgtaggtcgattgcacgagacccagctggatggtttggaaaattggatcaagattca +atccttaggcagttatactggacacggggccccaaccatgaaaacccatacgagagcatggtccctcattct +cagcgggccacacagctcatggctcttcttggtgaagcatcactgcatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgaaatcaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtggtgggagcctcaattgcagctcctgtcgtcggccaacagaatataattga +cccctggattagagaaaactttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagataatattagtgcagcccaaattacaatgtgcccccatgt +gattgttgatgtgagacagcttgagccagtgcttttgcccctccctgatataaggaataggttctttcatta +caatcaggaaaacacc---ccccgaatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtattcacggtgtcttgcagagtcctgacccgcccagcccccgactttgagttcactttctt +agtgccaccaactgtggagtcaaagaccaagcccttcacactccctattctgactcttggagagctgtccaa +ttctaga---ttccccgctccgatagatatgctgtacacagatcccaatgaggcaattgtggtacaaccaca +aaatggcaggtgcactctagatggaacacttcaagggactacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctgattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgacgggacaccatatgatccaacagatgaggtgccagc +ggtcctgggagccatagatttcaaagggactgtgtttggagtcgctagccaaa---ggaacaccacgggaaa +-----ct---ctgtaggg---------gcgacc--------cgt-----------gcccatgaagtacacat +agacaccacaaaccctagatacaccccgaaacttggctctgtgttgat---gt---------attctgagtc +tgctgattt---tgatgatggacaacccaccc---------------------------gctttaccccta- +--------ttggcatgggagccg---------------------atgattggcgccagtgggaactgcctga +atattctggtcac-cttact------ctcaacatgaacctggcccccgcggttgcccctgcttttcctggtg +agcgtatcctcttcttcaggtcagtggtaccat------ctgccggcggtta------tgggt--------- +--caggtcaaatagattgcctcatcccacaggaatgggttcagcatttctatcaggaggccgctccatcaca +atctgcggtggctcttattagatatgtcaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaggggtttatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggttaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagccttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatcctttaaacatgacaaagagatgttgcag +tctcaagttctggccaccaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaatgcgccgatgacaagaattttggattggaatgga +acgaggtattttgccccaaacagtatgaaaacaaccagttattcagg-tcagttctccagtaaccctgtgca +tg-----------tgcaacccaccctgtct---cgttctaattc---------------------------c +tcaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ttcgacggttttgactg-------cggg--------gt +ctgggtc----a---tctag-------------------aacaacatcctctt---------ccgcagcaac +ttccac-------------------tct--------------atctaggactagtgactgggtaagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcgaccatccccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccatagacagccattcttcgctc +acgttcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------tc-ttcctctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305612.1/1-7501 |Norovirus GII isolate Arg9847 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgatg---------------gaatgtttaacaacat +ggccgtcaccctcaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaggctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgtt +aactggaactattctggaaatgtgggatggggagatttatcattatggactgtatgtggagaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtatctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctacacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---cagaaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaagaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaagcccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactctgagggcgtgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +tttggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcttcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttccttagttcatagggccaaagaggagct +ctccagcaggccaaggccagtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcgacactcacaggagaccagagggtgggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggttaatcccgcaccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccggacatgtggaaggacgcctatcgctctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagagactagatgagtacgagttacaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcattcagacaactcgccgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaatacttactcgcttgagtctgacg +gcaagggtagaattgtagttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcgg +tacaccacctcagatgtgccagaatacggtactatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagacgcagatga--------ggccaccatgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagatgatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagagaaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgaattttgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgcct +ggtgactgcgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaaggaacatactgtggggcaccaatcctaggacctgggaatgccccgaaactaagcaccaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacatacgaaccggcatatctggggggaaaagacccc +cgagtcaaaggtggaccgtctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaatcatcaatgtgctagagcaaacaatagat +cccccacagaagtggacgtacgcgcaggcgtgcgcgtctctcgacaaaaccacatctagtgggtatccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaggataaagaagaggttgctttggggttctgacctggccaccatggtgcggtgc +gcgcgctcttttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagacgttctggctgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtaggcgacttc +agaatttccattaatgaaggattaccatcaggtgtcccttgcacctctcaatggaactccatcgcacattgg +ctcctcaccttgtgcgccctttctgaagttacagacctctctcctgacattgtgcaagccaactctctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaaattgacggggaagttg +agagaatacggcctcaaacccactcgtcctgacaaaactgagggccccctgaccattagcgaggatctgaac +ggcctgaccttcttgaggagaaccgtcacccgtgaccctgcagggtggtttggcaaactggaccaaagctct +atactcaggcaattgtattggaccaaaggccctaatcatgaagacccctctgagtcaatgattccacactcc +cagaggcctatacaactcatgtcacttttgggcgaggcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +tccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgtttcctcatgt +gattatagatgtaagaaccttggaacctgttttattaccactccctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgactttgattttacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagtcccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----acgatcacc----------------------------------tatacaat----------------- +----------------gtcaccatcacaaacctgaatgggtccccttttgacccctccgaggacatccctgc +ccctctgggcatgcctgatttccagggaagggtctttggtatcatctcccaaa---gagataa--------- +-----ac-----ataatagccctgggtataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------cttggcagac +cgacgacct---cacagtcaatcaaccagtca---------------------------aattcaccccag- +--------tcggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ttaaac------ctcaacacaaaccttgccccctctgtcgctccagtatttccaggag +agcgcctgcttttctttagatcatatatccctc------ttaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcaggtt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggtac---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggcttttcccctgctgacgcggccagaggcgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttactctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccatcacacccaaagccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcattcttcaaggccaactttg +accacaaccactgggt-----cctcacatgg------cacaacctcatc----------aaattca------ +-------------------------------actcgtagcacaagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305613.1/1-7529 |Norovirus GII isolate Arg10508 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gaaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagcctcgcgacaatagagctcacccccatatctctatactg +gagacctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtcttttggactccgcc +agacgtctctaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggacctggaagaagagaaagcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcaccatcaatgccatactggctaggatagctgctgctagatccctcctgcacaaagccaaggaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaatggggt +tgaccactgggatgcttacaggggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacccctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccctggccaacctgacatgtggaaagattatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaggggg +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttagacaagcaagggctagatactatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaagacacagaaccggagggcaagaagggcaaaaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatctttcgcccaacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgagggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcaggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacatatgaacctgcttatctggggggcaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcactgagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctagcagatcaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gctagggcttttggcggccttatggacagtatgaaagcgagttgtatagcccttccatgcagagtagggatg +aacatgaatgaggatggccccatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcgacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattgtactggacaagggggcctaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagagagtc +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgatgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcgccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgacataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagagttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaaccttgggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcctaatgaatcaatagttgttcagcccca +aaatggtagatgcactcttgacggcacgttgcaaggcacaacacaattggtcccaacacagatctgtgcctt +tagag-----------------------------------------gtactctgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacgcagtatgacccaacagatgacatccctgc +agtccttggggccattgacttcaaaggtacggtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgatacaactgacccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccactaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgata---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctgaatatgaatcttgcccctgctgtttccccatccttccctggcg +aacgaatccttttctttaggtctatagtaccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtacgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggattggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcggg-acaattctctagcagccccgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagtcgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---tttaacagtgttgtctg-------cagg--------aa +ctgggtc----c---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-cttcttct---t-cctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305614.1/1-7508 |Norovirus GII isolate Arg10515 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagagat------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------cgaagtcagaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggaacacaggccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcggcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtttgtccagacacgctgaaaggtctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttctttaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaatttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtggagacagttatcctaatggcggaactgttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgactttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacgttgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagtctcacggcttt +catgaagactctggatctagaagaggagaaggctaggaagctgtctaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccaggatagctgctgccaggtccctattacacaaggctaaagaagaaat +gtttagcaggatcagacccgtggtcgttatgatttcgggtagacctggcattggcaaaacccacatggcaag +gcacttggccaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacttggtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagagtcgccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcattcaggaagctggccgcagacaacaggt +atgggatcatggagacaatgagagtaggcacggcgcttaagagtgttaagaccttggaagatctgaaagttg +ccctgagggatgtgaagtttaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtctatactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagctcaaggca---gatgggagattgaacccaaggacacggaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaagaggaggccaagataagacaga +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggtcactggctcggaca +tcaggaaaaggagaccagatgattttcaaccgaagggcagtctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcacgaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaatctcctgatcacaacaacacacgtcctgccaaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcaccgtctgctccgtgcttgtaaaa +agacctacaggtgagatgattcccctggcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggcgactgcggttgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcagggacaagatggggaggcagtccttgagggaagtgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaaaaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacctaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctggaacaaatcattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacctccagtggtagcccccat +catgtcaggaaaaatgaccattggaacggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtatacggccgcactcaaagatgagctagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgattaggtgc +gccagggcctttggcggtctcatggacagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccattatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggtgacttt +gtcatctcagtccaggagggtttgccatcaggagtcccgtgcacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcgatggcggaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggcgatgacgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagaatatggtctggtccccactcgacctgacaagactgagggtccccttgtaataactgaagatctcacc +ggcctgacgttcctgcgtagatcaattgcgagggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccctaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttaccgtttcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttatctgagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttctttcatta +caatcaggagaacacc---cctcggatgagacttgtggctatgctttatacccccctgagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgtagaatcaaagactaaacctttcacactgcccatattaactcttggtgagttatctaa +ttccaga---ttcccagccccaatagatatgttatacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtacttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actccgcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattgaagaaccttgatggcacgcagtacgacccgactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcatat +caacacaaccgatcctaggtatacaccaaaactgggatccattatcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacgc-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccctattgttgtcccccctaacgggtattttaggtt +tgaggcttgggtgaatcaattttatactttgacccccatgggaattggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +gggtctttaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttacaa +tcacaagtgctggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgactgctggc +ggcttctcccccgcggatgctgctagaggggcagtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccgaatagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttctcagcatactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgtctcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtcag-------aagg--------aa +ccgggtc----t---tccag-------------------gtccatctccacat---------ccacagcggc +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +acctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctcc------ct-ttcttttc---t---cctttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305615.1/1-7528 |Norovirus GII isolate Arg10893 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccacctcttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgcccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------taaagtcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagcctcgcgacaatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtcttctggactccgcc +agacgtctctaattttatagcctccctgataggtgattttgaactgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggtttttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaggaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccctggccaacctgacatgtggaaagattatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaggaatggtaacaccccacatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaagggg +atgacctccagacatacaactttgataccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaaccttggaagatctgaaagtcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctaggtattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------atagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaagacacagaaccggagggcaagaagggcaaaaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggcaccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagatggagaggcagtcctcgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggcacatatgaacctgcttatctggggggcaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcactgagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgatcactggaatggggagtcttttactggtcccctagcagatcaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gctagggcttttggcggtcttatggacagtatgaaagcgagttgtatagcccttccatgcagagtagggatg +aacatgaatgaggatggccccatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ccaggtgggactcgacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacacggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattgtattggacaagggggcccaaccatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagagagtc +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgccccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcgccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgacataaggaatagattcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagagttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcctaatgaatcaatagttgttcagcccca +aaatggtagatgtactcttgacggcacgttgcaaggcacaacacaattggtcccaacacagatctgtgcctt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------ac----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacgcagtatgacccaacagatgacatccctgc +agtccttggggccattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaggcacacat +tgatacaactgacccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgata---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctgaatatgaatcttgcccctgctgtttccccatccttccctggcg +aacgaatccttttctttaggtctatagtaccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtacgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggcgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaagaatactggattggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-acaattctctagcagtcccgtcca +ca-----------ggtctcctgctcctctccagcacactgcccc---------------------------a +ccaa-------------------aagggaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------ttccttt------cc-cttcttct---t--ctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305616.1/1-7529 |Norovirus GII isolate Arg10896 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccacctcttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgcccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------taaagtcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagcctcgcgacaatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtcttctggactccgcc +agacgtctctaattttatagcctccctgataggtgattttgaactgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaggaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagatttccctggccaacctgacatgtggaaagattatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaggaatggtaacaccccacatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaagggg +atgacctccagacatacaactttgataccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaaccttggaagatctgaaagtcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctaggtattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------atagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaagacacagaaccggagggcaagaagggcaaaaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggcaccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagatggagaggcagtcctcgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacaaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggcacatatgaacctgcttatctggggggcaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcactgagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgatcactggaatggggagtcttttactggtcccctagcagatcaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gctagggcttttggcggtcttatggacagtatgaaagcgagttgtatagcccttccatgcagagtagggatg +aacatgaatgaggatggccccatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcgacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacacggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattgtattggacaagggggcccaaccatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagagagtc +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcgccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgacataaggaatagattcttccatta +caaccaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagagttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcctaatgaatcaatagttgttcagcccca +aaatggtagatgtactcttgacggcacgttgcaaggcacaacacaattggtcccaacacagatctgtgcctt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------ac----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtcaagaacctagatggcacgcagtatgacccaacagatgacatccctgc +agtccttggggccattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaggcacacat +tgatacaactgacccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgata---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctgaatatgaatcttgcccctgctgtttccccatccttccctggcg +aacgaatccttttctttaggtctatagtaccat------cagctggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtacgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggcgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaagaatactggattggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-acaattctctagcagtcccgtcca +ca-----------ggtctcctgctcctctccagcacactgcccc---------------------------a +ccaa-------------------aagggaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------ttccttt------cc-cttcttct---t-cctccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305617.1/1-7516 |Norovirus GII isolate Arg10907 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcatcactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagacaaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacgcttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgacgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcaa---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305618.1/1-7515 |Norovirus GII isolate Arg11943 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcagtga----------------tcagcactgcccctcagttaagattgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggaacacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacactccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaaacatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagttccagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cgctgagggatgtgaagttcaatgagtgtgagataatttacagaagctccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttaacaaagttgaggaccaaacatcccaggccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagggccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggtctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagattcagattcacaagtctggagagttctgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggagggcgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggagtccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagctctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcacggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaactttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aatcgttgatgtaagacagcttgagccagtacttttgcccctccctgacataaggaatagattctttcatta +taaccaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgcccagcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggtaggtgcactctagatggaacacttcaagggaccacccaattggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaga---gaaacaccacagggaa +-----cc---ctacagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccaa +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtaccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcaccgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttggctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccagaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatcctttaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacgtcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactggtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305619.1/1-7515 |Norovirus GII isolate Arg12540 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggaacacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacactccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaatggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagcttcagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttaacaaagttgaggaccaaacatcccaggccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagggccaggtactatgtcagctgcttccaagacctcgtttacactctaatgc +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaaag +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggtctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggattgtggact +acaacgagaggcttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaacgagctcttt +ggagttgagatcaaacagattcagattcacaagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggagggcgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagctctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcacggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggcctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaactttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aatcgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taaccaggaaaatacc---ccccggatgagactcgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcatcaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtaccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcagtggctcttatcagatatgtcaaccctgacactgggagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccagaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaagaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttagt----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcacctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgaaaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305620.1/1-7465 |Norovirus GII isolate Arg12771 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +---------------taataacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +aaaagttggattcaagaaaa----tgctgggtgccgttcccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagtcaagatcgggcctaaaactttaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattggattgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggaacacagaccggctaccgagccact +tcctggcacaatattggaaatgtgggatggtgagttctaccattattccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggtcttgctggtgagaagtt +tccctatacggccttcagtaacaactgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaacgcaatcctctgtgcactcggttcactgttctc +aaaaccaattaaagacctgttaggtaaactcaagccattgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtattttggaccccccc +agatgtctctaattttgtagcctccctaataggtgattttgaattacaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagctatagggaacaaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggctaaagaggagat +gttcagcaggatcaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacagaggagagagggtggtcttgtgggatgactacggcatggggagccccgttaa +ggacgctctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgataaaaatggcaacaccccacacggcaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaatatacaattttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacaatgagggtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgggtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgattccga-----aaagg +aagtggcacaaagca---gatgggaaattgaacccaaggatacagaaccagaaggcaagaagggtaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgatttccaaccaaaaggcaacctatgggcagatgacaccagaagcgtggact +ataatgagaggcttgactttgaggcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcactacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaagcaaatccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggacttgtgctggaggaaggcgcccctgaaggtactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacattgttgtcgcaggtgttcataccgcagca +gcacgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgaggggaatgag +gaccttggcacctattgtggcgccccaattttgggccccggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttaccacctggcacatatgaacctgcttacctagggggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagatcagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagttttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctatttgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagtccttcactggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagctgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgattat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtatcaggtctctcaccagatgtcgtccaagctcactcttgtttt +tccttttatggggacgacgagattgtcagtactgacatcaactttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccactcggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccatatgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtccccatttttacaagaaagtt +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacagaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaattacaatgtgccctcatgt +tataattgatgttagacagttagaaccagtcctattacctatgccagatattagaaataatttcttccatta +caatcagggcaatgac---ccaaaattgaaattgatagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcggagatgaccaa +ctcaaga---ttcccagttccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacactcgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacggaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgctacg--------aga-----------gcccatgaagccaatat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccatttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggtggcca------tgaat--------- +--tgggttacgtggactgccttgtcccacaagaatgggttcaacacttctaccaagaagctgccacagctca +gtctgaggtggcgctcataaggttcatcaacccagacactggcagagtcctctttgaggccaagttgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gattc---------aataatggccagtgctttcctagcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaacgctattaaccaaaaggttgagtttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctcccctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgctatgaggacaacaggttattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaaca--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcaagacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctat---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaaa-ttgattagtttgttcttcttttc------ta-ttattcct---tta------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305621.1/1-7515 |Norovirus GII isolate Arg12774 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcttgtacgtagaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgagcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctcgctcacaggggaccagcgtgtgggtctcatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaaatgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggttgaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctataagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccacat +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgagctcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaacgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacgaacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcgaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaattgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +aacaggctatgttacagtggctcacactggccaacatgatttggtcattcctcccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtagagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaggcagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggggcaat---------------------------------g +ccaggaa----------------aagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgctgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggaccggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----c------tttag----------g-tt----t--------tttta- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305622.1/1-7463 |Norovirus GII isolate Arg12827 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcaacc +agctgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcagctattagtcttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcagtatactagcttcctgcgattg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagacctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggtaagatgct +atcgtctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaagttgat +catgaagtggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagacctcgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctagtacatcgggcaaaagaagagct +ttccagcagaccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctactcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacctgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acgtacaaaacctctggt +ccagaccacaggtagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgtggtaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaagctcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggagggggcccctgaaggtactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaatgccaagagcatggatttgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaactcaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcttcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgtttacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgatccgttgc +gctcgagcgttcggagggttgatggatgaactcaaggctcactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagggctgttttagctgcagccctggagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgaccttcttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaattaaatccattcctggcacacctttcaagaatgtataa +tggttatgccggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacattttcctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagactttgattttaattattt +ggttcccccaaccgtggaatctaaaaccaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +gccattgggcacgccggatttcctggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggta---------cttgggaaga +acatgatct---tgatctcaatcaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctcccctttttccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgctggtgatataatcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtattgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctcc--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctctttcaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ccattc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305623.1/1-7521 |Norovirus GII isolate Arg12866 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---aaatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgataccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactgttcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaacccaccttgccag +ggaactggctaagaagatcgcggcctcgctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcactaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +tattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggctactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaacttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtccggccgcggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaggacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagtatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctctc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggttgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccattatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcgtttgcgcaagcttgcgcatcccttgataaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggcaagatcaagaagaggcttttgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaacgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgatttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccccgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagaaaggctgacagcgaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccagaggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattttatagtaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaagtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttgcccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttcacaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagtcttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------aagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305624.1/1-7521 |Norovirus GII isolate Arg12908 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagatatcaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactggtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagtagagacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgaactaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagatctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtatcaggattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctaaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgccgcatccactctaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtaagatccatcgaagatgcagt +gctagacctcgaggcaatcgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgctctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtcttcgacagcgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccgggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattagctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagacactca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactacaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaaaaacatcgcgatcaagaagtgccagatagtgtacaatggtagtacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaacgaactagccggtgccc +tacaccacttaaggtgcgctagaatcagatactatgttaagtgtgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctaagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagcgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgttacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgttatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcagcaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaatcgat +ccgccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagtggccacccacac +cacatgcggaaaaacgattgttggaatggggagtctttcacaggaaaattggctgatcaagcctctaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagtcggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactctacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaggatccatttgacacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---ggggaaagttgt +atttgcagcagtcccaccaaattttccaactgaaggcttgagcccaagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttgcccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccactcaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttactttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +cagcaagcatccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatactcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaaactt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgc-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggagcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acgttcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305625.1/1-7511 |Norovirus GII isolate Arg13099 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctggcag---------aaacaac +a------ac----agcgacaatgcgaaatcttcaagtgata---------------gtttattttctaacat +gactgtcacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaataaaacaa +acaaacaa---------------accaccaagaccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggacgaaccaacggtt +acttataggg----------cggg---ggaaggcgtgtcaggactgcctgacttaacaactgtcagacaacc +tgatgcgcaaaacacagcctacagtgtccccccactcagccagagagaagctggagaagccagagaaccgtt +acctggttctatcttggaaatgtgggacggtgagatctaccactatgggctgtatgtggatcgtggcaacgt +actcggggttcacaaaccgcctgctgcaataagcctcgccaaaattgaattaacacctttatcactctactg +gagggtggtttacactcctc---agtatttgatgtcaccagacacattgaagaacctaaatggagaatcatt +cccctacacagcatttgacaacaactgctacgcattttgttgctgggtcttggacctcaatgactcgtggct +tag---caggagaatgattcaaaggaccactgggttctttaggccttaccaagagtggaacaaaaagcccct +gccaaccatggatgagcccaaaatcaagaaagtcgcaaacgcccttctttgcgcactctcctcactcttcac +gaggcccattaaagacatcattggaaaactcagaccacttaatatcctcaacatactggctacctgtgattg +gaccttcgcaggcattgtggaatccttgattcttctagctgaactcttt---ggagtgttttggacaccccc +agatgtgtctgctatgattgctcccttactcggtgactacgagatgcaaggccctgaagatctggccgttga +actcgtgcccgtagtaatggggggaataggtttggtgctcggattcaccaaggaaaagatcggcaagatgct +gtcatcagctgcttccacactcagggcctgcaaagacttaggtgcatatggattggaaatactcaaactagt +catgaaatggttcttcccaaagaaagaagaggcagatgaacttgccatggtgagggctatagaggatgctgt +attggatttggaggcaatagaaaacaaccacatgaccactcttctcaaagacaaggacagcttagcaacata +catgagaaccctcgacctggaggaagcaaaagcaagaaaactctctactaagtctgcctcacctgatatcgt +gggcacaataaacgccctcttggcaagaattgcggctgctagatcactagttcacaaagcaaaggaggaact +gtcgagcagacaaaggcctgttgttgtgatgttatctggtaggccaggtataggaaagacccaccttgcaag +ggagctggccaagaaaattgccacaacattagcaggtgaccaaagggtggggctagtgcccagaaacggggt +agaccactgggatgcttacaaaggagaaagagtggtgctatgggacgattatggtatgagcaatccaataac +agatgctctaagactccaagagttggccgacacttgcccattaaccctaaattgtgacagaattgagaacaa +agggaaagtgtttgatagtgatgccataatcataacaaccaaccttgcaaaccctgcaccgctagactacgt +caactttgaggcctg-ctccagacgcatagacttcctagtgtatgcagatgctccagacatcgaaaaggcca +aacgtgacttccccgggcagccagatatgtggaaagaacactatagaccagacttctcacacatcaaactcc +agcttgcaccacaaggaggttttgataagaatggcaacacacctcatggaaagggtgtgatgaagtccctga +cggttggttcgctaatcgccagggcatctggactgctccatgaaagaatggatgagtttgaattccaaggcc +ccagcctaacaactttcaattttgaccgtaacaaggtcgctgccttcaggcaactggcagctgagaacaaat +atggcatgatggacaccctaagagttggtaatcaactaaagagtgttaaaaccatggatgaacttaagcggg +ccattaggaacgtcaccatcagaaagtgccagatagtgtacaatgggtgcacctacaccattgagtctgatg +ggcgcggcaaagtgtcagtcgacaaggtgcagagtgcaacggtccagacaaacaatgaacttgtgggagcac +tacaccatctcaggtctgcaagaataaggtactatgtcaagtgcttccaggaggcagtctattccatactac +aaattgccggtgcggcctttgtcacctcacgaattgtgaggcgcatga------acatttcaagcctttggt +ccaaaccacctgttgaggaagatgatga--------aactgaggacaaagatggatgccccaaacccaga-- +-gaa----gaggatg---aaatcataatcgtctctaaggacatcaaagaagaggggaagaagggcaaaaaca +aaaccggccgtggtaagaaacacacggctttctccagcaaaggcctcagtgatgaggagtatgatgagtaca +agaggatcagagaagaaaggaatggaaaatactcaatagaggagtaccttcaagacagggacaggtac---t +atgaagagcttgccattgccagagccactgatgaagacttctgtgaggaggaagaggtgaagattcgtcaaa +gaattttccgccctaccagaaaacaacggaaggaggagagagccacacttgggctcgtcacagggtcagaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaaattgtgggctgacgacaaccggagtgtggact +acaatgaaagaatagactttgaagcaccaccaagtatctggtctagaatagtcagttttggttcaggttggg +gattctgggtgtctc-caagcctcttcataacatcaacacatgtgataccaaaaggcatcacggaggcattt +ggggtaccaattagccagattcaaattcacaaatcaggagaattttgccgccttcgatttcccaaaccaatc +agaacagatgtgagtggaatgatcttggaagaaggtgctcctgaagggactgttgcgaccattcttgtgaaa +cggccaactggagagctaatgccccttgcagccagaatgggaacccatgctacaatgaaaattcagggaaga +acagttggtggccaaatgggcatgctattaacaggctcaaatgccaaaagcatggatcttggaacaacacca +ggtgattgtggttgtccctacatatacaaaagaggcaatgacttcgtagtcattggcgtgcacactgcagca +gcacgcgggggcaacaccgtcatctgtgccacacaaggaggtgagggtgaggccactcttgaagggggtgac +aacaagggaacctactgtggagcccccattctggggcctggcaatgcaccaaaattgagcacaaagacaaaa +ttttggaggtcatccaacgcaccactcccaccaggtacctatgaaccagcttacctgggtggtagggacccc +cgtgtgaaaggaggcccttcattacaacaggtcatgagagatcaattgaagcccttcactgagcccagggga +aaacagccaaacccaaaagtccttgaagcagcaaaacaaactataatcaatgtacttgagcagaccatagac +ccccctcaaaaatggacctatgcccaagcttgtgcctcgcttgacaagacaacatctagtggtcatccctat +cacgttcgcaagaacgactactggagtggtgagtctttcacaggaaaattggcagatcaagcatcaaaagca +aatctcatgtacgaggagggaaaacacatgccaccagtgtttactgcagcactcaaggatgaactggttaaa +actgacaagatctatgggaaaattaagaagaggctcttgtggggttcagacctttccaccatgatacggtgt +gccagggcatttggcggcctaatggatgagctcaaagcgcactgtgtgaccctccctgtaagagtaggaatg +aatatgaatgaagatggtcccataatctttgagaaacattccaggtataaatatcattatgatgctgattac +t-cccgttgggactccacacagcaacgggcagtgctagcatcagcacttgaaatcatgg-tgaggttttctg +cagaaccacaatt-ggcacaaatagtagctgaggacctgttggctccaagtgtggttgatgtgggtgatttc +aaaatagcaatcaatgagggcctaccttctggtgtgccttgcacgtcgcagtggaattccatctcccattgg +ctactcacactgtgtgccttgtctgaagtgacaggcctaggccctgacatcatccaggccaactccatgtat +tccttctatggtgatgatgagattgtaagcactgatataaaacttgacccagaaaagctaactgcaaaactc +aaggaatacggcctcaagcccacccgccctgacaaaaccgaggggccattggtgattagtgaagacctgaat +ggactgactttcctccgacggacagtaacccgtgacccagcaggctggtttgggaaactggaccaaagctcc +atcctcaggcaaatctactggactagaggacccaatcatgaagatcccagtgaaaccatgataccacatgca +caaagacccgtccagcttatggcactgcttggggaatcatccctacatggaccatcattctatagcaaaatt +agcaaattagttatatctgaacttaaagaagggggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccttggaaccagttgcaggcgcagctattgccgcacctgtcactggtcaaaacaatataattga +cccctggattagattaaattttgtacaagcaccaaatggagagttcacagtgtcacctaggaactctcctgg +agaaatcttactaaatttggaattaggacctgatctgaacccatatttggctcatctttcaagaatgtataa +tggctatgctggtggtgtagaggtgcaagttctcctagcggggaatgcgttcaccgc---tggaaagattct +gttcgccgccgtgccaccaaattttccagtagaattcctaagtccagctcaaattacaatgctcccacattt +aatagttgatgttaggacccttgaaccaattatgattccccttcccgatattaggaataccttctttcatta +taacaatcaacctgca---aaccgtatgagattagttgctatgctttatactccacttagatctaatggctc +aggtgatgatgtgtttactgtttcttgcagggttttgactaggcctactcctgattttgaatttacttattt +ggttcccccgtctgtagagtcaaagactaagcctttctcattgcctatcctaacgctttctgaattaacaaa +ttccaga---ttcccagtccctattgattcactctttactgctcagaacaatgtgctgcaggtgcagtgcca +aaatggtaggtgtacgcttgatggtgagctacaaggcacaacccaattactgccagcagggatttgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------gaac---------------------------------------------------cg---- +-------accacc----------------------------------ctgata------------------- +--------agtggcacatgcagctgcaaaacctcaatggcactacatatgacccaactgatgatgtgccagc +cccacttggcacacccgacttcaaaggtcttctctttggagttgcaagtcaga---gaaatgtgggt----- +------------ggcagcacaccaggtgccacc--------aga-----------gcacatgaggtagtcat +ctcaacaactagttcccaatttgtccccaaattaggttcagtcaattttgga------------agcaccag +tgatgattt---tgacgaaggtcaaccaacaa---------------------------aattcacacctg- +--------tgggcatta---aagtagaacaaa---------accacactttcagacaatgggagctgccaga +ctactcaggacgg-ctcact------ctaaatatgaaccttgcacccccagttgcaccaaactttcccggtg +agcagctgctgttcttcagatccaatgtcccat------gcgccggaggata------tgacc--------- +--ctggcatcattgattgtcttattccacaggaatggatccaacacttctatcaggaatcagctccctctca +gtcagatgtggccctaatcaggtatgtcaaccctgacacaggtcgcactttgtttgaggcaaaattgcacag +gactggatacattactgttgctcactctggggactatccccttgttgttccggccaatggatactttagatt +tgattcttgggtaaatcaattttactcactcgcccccatgggaactgggaatgggcgtagg---------ag +agctc---------aataatggctggagccttcatagcaggattggcaggcgacatgctcacgtcaacagtg +ggctccctggcgaccgccgg---ggcaaacgccatcaaccaaaagatagactttgagaataacaaacag--- +------------------------------ctccagtccgcctccttccaacatgataaagagatgctccaa +tcacaggtgcaggcaaccaaacagctgcaggctgatatgatatccataaaacaggggattctgaccgcaggc +ggcttttcccctactgatgcagcaagaggggccatcaacgcacccatgacaaaggtgcttgactggtctgga +acccgttactgggcgcccaactccacaaggaccaccagttattccgggcaattcacctcctca--------- +cc--------------tgtgcatcgtcccagcccgact---------------------------------g +ttc-ctc----------------aaccaaaagctgtgaaatccaa--------------------------- +------------------------------atcatctgcatattcttcttcttctggt------------ag +t--gttta-----------tagtt------------tg-------tctacccaatcaacaatgttaccat-- +----------cagatt-----cttctaatag------tttagtttcttctgcttcaacaaaaatgacaaatt +tgagt-----------------------------------------ggctctt------------------c +tagaga---------------------------------------taggacagcagagtgggtcaaccaaca +gag---gagcctcagcccattcatga---gtggtgcacttaacatctcacatgtgacaccgccttcaagcag +ggcttcc---agtt------------------------------ctggga---cagtctcaaccgtgcccaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatc-------- +-------aat-tggatt---taaa--at---------------------------------tttaaaattt- +--ggcctat----ttga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305626.1/1-7515 |Norovirus GII isolate Arg13435 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaataattgaaatgtgggatggagaaatctaccattacggcttgtacgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---cagaagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagtaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctcgctcacaggggaccagcgtgtgggtctcatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggttgaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaggaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctataagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccacat +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgagctcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaacgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacgaacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcgaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctttataa +aacaggctatgttacagtggctcacactggtcaacatgatttggtcattcctcccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaggcagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------aagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc----------t-tt----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305627.1/1-7502 |Norovirus GII isolate Arg13737 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------tcgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccgacccaaacagccg-gccccgagggaaaaacctcca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctagcacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggagccgtt +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatacctccagacaccttgaggaaactccacggtgaactatt +cccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agacgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatattgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaatgccctgttggctaggatcgctgccgcgcgctccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcga +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgctctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaggaagg +ctatcaagaacatcacaatcagaaagtgtcagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggctatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcgactgaagaagacttctgtgaagaagaagaggttaagatacgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacacct +ggtgactgtgggtgtccctatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgttatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgt +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctggctgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagtcacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +gtactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagataa--------- +-----ac-----agaacagccctggacacaatg----aaccagc----aaacagaggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgacct---cacagtcaatcaaccagtca---------------------------aatttgccccag- +--------tcggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtaccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaagcaactaagcagctgcaggcagacatgatggctattaaacagggggttctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggactggaacggt +acaaggtactgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgtcactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccacaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305628.1/1-7463 |Norovirus GII isolate Arg13802 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggccgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttttgttgctgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgtgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctaaaattgat +catgaagtggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggtcaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagcaaccccatcct +cgacgccctcaggctacaagaacttgctgacacttgtcccctaacattaaattgtgatagaattgagaataa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggacgcttttagatctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgaattacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tgcaccacctgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtctccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatc +agaactgatgtgacaggtatgatcctagaggaaggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgcctctagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcattggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatcttttacagggaagttggctgaccaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgaactcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggacccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttctgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +taatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagactttgattttaattactt +ggttcccccaactgtggaatctaaaaccaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------agtggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaattcacacccaagttaggatctgtggttttgggta---------cttgggaaga +acatgatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgactgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgccttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acgtcaaccacaccagccccc---------------------------- +------acacctatatc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgtcag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacaaggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ccactc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305629.1/1-7463 |Norovirus GII isolate Arg13808 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggccgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatgtccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttttgttgctgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgtgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagctttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctaaaattgat +catgaagtggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagcaaccccatcca +cgacgccctcaggctacaagaacttgctgacacttgtcccctaacattaaattgtgatagaattgagaataa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggacgcttttagatctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgaattacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tgcaccacctgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtctccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatc +agaactgatgtgacaggtatgatcctagaggaaggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgcctctagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcattggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatcttttacagggaagttggctgaccaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgaactcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggacccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttctgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +taatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagactttgattttaattactt +ggttcccccaactgtggaatctaaaaccaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------agtggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaattcacacccaagttaggatctgtggttttgggta---------cttgggaaga +acatgatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgactgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgccttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acgtcaaccacaccagccccc---------------------------- +------acacctatatc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgtcag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacaaggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ccactc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305630.1/1-7463 |Norovirus GII isolate Arg14071 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtatctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggagactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgctgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaagaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgtt +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaaattgat +catgaagtggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgccctcaggctgcaagaacttgctgacacctgtcccctaacattaaattgtgatagaattgagaataa +aggaaaggtctttgacagtgatgccataattatcacaactaacctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgattacgaattacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgccttcagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gtaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tgcaccacctgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagaggatgaggaaga--------gaccaccagcaaagatgggtgcccaagaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagcaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtctccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcattggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagctaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaatattggaatggggaatctttcacagggaagttggctgaccaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgaattcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggacccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctttctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaacccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagacttcgattttaattactt +ggttcccccaactgtggaatctaaaaccaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactacttggtaccacacagcttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagtcactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaattcacacccaagttaggatctgtggttttgggta---------cttgggaaga +acatgatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctcccctttttccaggtg +aacaaatactcttctttaggtcccatatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggggccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgtcag +cgggactt--------------------------------ctggtctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ccactc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305631.1/1-7513 |Norovirus GII isolate Arg14085 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctgcc------------aaaagc +a------ac----agcgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ctc-----------------------------ccccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcag---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcatttagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gcttggtgtgcacaaaccaccagcagcaatcagcctagctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacaatctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +aaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactaggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaactta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggatagcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgtcttgatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgatcactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagtagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagatttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccggttccctcgttgcccgagcatcagggctcctccacgagaggttagacgagtatgagctgcagggcc +caattcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagttctagagga--------ggctaacaacgaggagggttgtccaaaaccaaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggaatacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggcaaaaatccggcaga +ggatattcagaccaacaaggaaacaacgtaaagaggaaagagcttctcttggtttggtcacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgtccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgttacaggcatgatcttggaagaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgcaaccatgaagattcagggtcgc +actgttggtggacaaatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacaccgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctgggaatgctcccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaaaaagactataatcaatgtacttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattactggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatgggatagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgagatagtgagcacagacatcaaattagacccagagaagttgacagcaaaactg +agggaatacgggctcaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaagctggaccaaagttca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattttacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtccacctcccgatgcctgacgttcgcaacaacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcgatgctatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactaaacctagtcctgatttctcattcaattttct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatatagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagaggtatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgagccagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacacttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ctaaaac----------------gaaccaggcccctaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagttcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305632.1/1-7524 |Norovirus GII isolate Arg14249 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaagtaccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggctatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305633.1/1-7524 |Norovirus GII isolate Arg14493 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgactttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggccagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggacgtggcaagaagcacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacgttagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacgtaaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcaaccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305634.1/1-7524 |Norovirus GII isolate Arg14617 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aggaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcact +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccgtggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgattatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agtttatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaatagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcactgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacgcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactaaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcggatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ttgatacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttggggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtatgcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgac-----ca-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305635.1/1-7515 |Norovirus GII isolate Arg14711 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccag---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagcgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaggc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaacagttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagtaggatcagacccgtggttgtcatgatctcgggtaggcctggcattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactacaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcattataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagaatcgccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaaaccagacttttcccacataaaactaa +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagttg +cactgagagatgtgaagttcaacgagtgcgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagctaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcagaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggactgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccggatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgccttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagttaaaacctttcacagaacccaggggc +aagccacctaggcctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +accgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtatggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcctcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagaccaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcaacccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacggggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccctgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcaatggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaaggaacatctttgaggcaaaactgcatag +agaagggtttatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaacggttacttcaggtt +tgaggcctgggttaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +aactc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtgctggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttctcccctgcagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagtccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaagttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgttccttcac----------------- +---------------------aatcaactta---ctcaacggttttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcttctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305636.1/1-7519 |Norovirus GII isolate Arg14735 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggtt +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +gatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttgacttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------c----------------tt-------------ctttt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305637.1/1-7521 |Norovirus GII isolate Arg14741 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccgagaccaccaactcccgagttggtc-------aggaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcactacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaagccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaatgagctggttggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgcgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagagactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgcattctggaatggtgagaccttcactggcaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gcaaggtcatttggtgggcttatggacgagatgaaggcacactgcacatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-ttaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcagaaataatttctatcatta +caaccagtcaaatgat---cccactattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtacacctagcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactc +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----acccaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccggtgtctcgagcctcccgt------------------c +aaatgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ccttct-----------tt-------------ttctt- +-------------tatc---ttt------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305638.1/1-7515 |Norovirus GII isolate Arg14757 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacaaaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactctgtgtacgtcagcggtggcaaagc +cttaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatttctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaatgcaattctctgtgcacttggatcactgttttc +aaagccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacgccgcc +agatgtttccagtttcatagcctctctgataggtgattttgaattgcaagggccggaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggtccttggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaggagaaagctgagatggaaaccctaagggcgattgaggatgctgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaggaagagaaggcgaggaagctgtccaccaaatcatcctcgccggacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcaggtagacctggcattggcaaaacccacatggcaag +acatttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccttaacactgcaagagctggccgacacctgcccagtgactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgactatgt +gaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcgccagaaatcgagaaggtta +agagagacttccctggccaacctgacatgtggaaggatcatttcaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtctcgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagcgtcaagaccttggaagatctgaaagttg +tactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgagggccaaacatcccagaccacaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgaaac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaata +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctaagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgttac---t +atgaggaagtagcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggtgtgcttggtttgattactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtccttcctaagggggttaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggtacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgtggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcccgcctacttggggggtaaggaccct +agagtggaaaaaggaccatccctgcaacaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagtccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaagcatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aatatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcatcctctcggccgctatggaagtgatgg-tacggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggaaggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatagtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcgattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagtatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtatcgccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagcttaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgtccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcagggaaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------tgattcaacag--- +--attcagtccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacaacccatcc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgccttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcagttctacacactcacccccatgggaactggacaggggcgcaga---------ag +aatcc---------aataatggcaggagctttcctagctggattggctggtgacgccataacgagtggtgtc +gggtccctaatcaatgctgg---ggccaacgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatcctttaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccgaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttgccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcaagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------tcaatacccataggcagcctctcttcgctt +acgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305639.1/1-7521 |Norovirus GII isolate Arg14774 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccgagaccaccaactcccgagttggtc-------aggaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgtt +aacaggggcaatattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaagattaagccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgccgt +actagatcttgaggcaatagaaaataaccatatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaatgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaagggacatactgtggggcacctattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcaggttttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaacgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttt +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggtaggtgtacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtacacctagcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtagg---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactc +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caagtctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aaatgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ccttct-----------tt-------------ttctt- +-------------tatt---gtt------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305640.1/1-7502 |Norovirus GII isolate Arg14811 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgtt------------aatagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaatcccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggagccgtt +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatacctccagacaccttgaggaaactccatggtgaactatt +cccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcgttgtcatcattgttcac +tagacccattaaggatataattggcaagcttaagcccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcgatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaatgccctgttggctaggatcgctgccgcgcgctccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +cgaccattgggatgcctataaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcga +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgccctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcctgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +acggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaaag +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtgagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcttcagaagacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggtaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacacct +ggtgactgtgggtgtccctatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaaatggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggttctgatctggccacaatggtgcggtgt +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctagctgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagtcacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggcgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccacccggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgaatcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaaattggt +cttcgccgctgtcccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccctagaacctgttttattaccacttcctgatgttaggaacaatttcttccatta +taaccagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaattctcacactcggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacactagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgatccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagataa--------- +-----ac-----agaatagccctgggcaaaatg----aaccagc----aaacagaggacacgacgctgtggt +ccctacctacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catgggagac +cgacgacct---caaagtcaatcaaccagtca---------------------------aattttccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaacctcgccccttctgttgctccagtgtttccaggag +agcgcctgcttttctttagatcatatattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaagcaactaagcggctgcaggcagacatgatggctattaaacagggggttctgactgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggattggaacggt +acaaggtactgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------tcagcacacccaaaaccgtcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305641.1/1-7502 |Norovirus GII isolate Arg14813 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgtt------------aatagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaatcccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggagccgtt +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatacctccagacaccttgaggaaactccatggtgaactatt +cccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcgttgtcatcattgttcac +tagacccattaaggatataattggcaagcttaagcccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcgatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaatgccctgttggctaggatcgctgccgcgcgctccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +cgaccattgggatgcctataaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcga +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgccctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcctgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +acggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaaag +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtgagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcttcagaagacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggtaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacacct +ggtgactgtgggtgtccctatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaaatggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggttctgatctggccacaatggtgcggtgt +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctagctgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagtcacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggcgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccacccggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgaatcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaaattggt +cttcgccgctgtcccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccctagaacctgttttattaccacttcctgatgttaggaacaatttcttccatta +taaccagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaattctcacactcggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacactagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgatccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagataa--------- +-----ac-----agaatagccctgggcaaaatg----aaccagc----aaacagaggacacgacgctgtggt +ccctacctacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catgggagac +cgacgacct---caaagtcaatcaaccagtca---------------------------aattttccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaacctcgccccttctgttgctccagtgtttccaggag +agcgcctgcttttctttagatcatatattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaagcaactaagcggctgcaggcagacatgatggctattaaacagggggttctgactgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggattggaacggt +acaaggtactgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------tcagcacacccaaaaccgtcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305642.1/1-7498 |Norovirus GII isolate Arg15441 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +tcc-----------------------------tcctccacctaatgacgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaatctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +cataaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcatagcattcagacaattggccgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatgg--------atcagagactaaggaagaggcccccaagtcaggg-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagttattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacgcagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccacgaccaagtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctcaagcgggcatccctat +cacgtccgaaagaatgaatactggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-cgcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactacttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcacgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaga---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------gggcacgacgctgtggt +ccccacttacacaacacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305643.1/1-7498 |Norovirus GII isolate Arg15468 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatgacgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcatagcattcagacaattggccgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgtcggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------attagagactaaggaagaggcccccaagtcaggg-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatattgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacgcagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccacgaccaagtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaagaccacctcaagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggcgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttccttcgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactacttggtgaagcctctcttcacggaccctccttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggttatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgtttcctcacgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaga---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------gggcacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305644.1/1-7497 |Norovirus GII isolate Arg15733 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaaaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggctaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaagggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagcaggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacgctggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagagctctggt +cgaagccacaact---agatcaaaatga--------atcagatactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgtcccaccaagaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaacagtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtccgagttggcatg +aatatgaatgaagatggcccaataatattcgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtacagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaatag +tccc--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttactcttctttagatcatatattccc------ctcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattagttaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcgacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagaaca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccgccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305645.1/1-7497 |Norovirus GII isolate Arg15734 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaaaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggctaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaagggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagcaggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacgctggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagagctctggt +cgaagccacaact---agatcaaaatga--------atcagatactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgtcccaccaagaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaacagtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtccgagttggcatg +aatatgaatgaagatggcccaataatattcgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtacagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaatag +tccc--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttactcttctttagatcatatattccc------ctcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattagttaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcgacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagaaca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccgccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305646.1/1-7497 |Norovirus GII isolate Arg15735 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaaaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggctaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaagggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagcaggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacgctggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagagctctggt +cgaagccacaact---agatcaaaatga--------atcagatactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgtcccaccaagaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggatggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaacagtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctatctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtccgagttggcatg +aatatgaatgaagatggcccaataatattcgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtacagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaatag +tccc--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttactcttctttagatcatatattccc------ctcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattagttaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcgacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagaaca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccgccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305647.1/1-7520 |Norovirus GII isolate Arg15983 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaaccctt +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagatctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +agaggtggcgaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacactccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaggttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaattcgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaacaaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaggccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaagtaccactatgatgcagactac +t-ctcgttgggattcaacgcaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccttgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcagcaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagacataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcacta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcactcaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcagatccactatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagctccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctactgccaactctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccataacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttta-----t-tt-------------ttctt- +-------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305648.1/1-7458 |Norovirus GII isolate Arg16008 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aattctgtcaat +g------ac----agcaacaatgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +aaaagttggactcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------ccaacattgccccacagtcaagatcgggcttaaagcattagcaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactatagttggattgccggatttgacaacggt---gcaaaa +tgaacatgaaaacactccatacactgtccctccattaagtgagagggaacacagaccggctaccgaaccact +tcctggcacaatattggaaatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggatacattaaagggtctcgctggtgagaagtt +tccctacacggccttcagtaacaactgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaatgcaatcctctgtgcactcggttcactgttttc +aaaaccaatcaaagacctgttaggtaagctcaagccattgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggcatagtggagacagtcatcttgatggcggagcttttc---aatgtcttttggaccccccc +agatgtctccaatttcatagcctccctaataggtgactttgaattacaagggcctgaggacctggccgtgga +gctcgttcccgtggttatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcgtgcaaagacctagggaactatgcccttgatatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggagaccctgagggcgattgaagatgccgt +cctagatatggaagctatagggaacaaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaatgccatactggctaggatagctgctgctagatcccttctacataaggtcaaagaggagat +gttcagcaggattaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgaccactgggatgcctacagaggagagagggtggtctcgtgggatgactacggcatggggagccccgttaa +ggacgccctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaactttgaggcgtg-ttctaggagggttgacttcctggtctacgcggagtcaccagaaattgaaaaggtca +agagagacttccctggccaacctgacatgtggaaagatcattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtctctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggta +acgacctccaaacatacaattttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacaatgagagtgggtgcggcactcaagaatgtgaagaccctggaagaccttaaaattg +cattgagggatgtaaaattcaatgagtgtgagataatctacaagaactctaagtaccgggtttcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaacgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcgtcatttgttgtca---------------gcagga------tctctagaaggttctgct +gggagaggtgggtcaaaccgaccgagac-------------ccaggaggtgagtgattccga-----aaagg +aagtggcgcaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagaatatgacgagtaca +agagaatcagggaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgctcgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctgtgggcagatgacaccagaagcgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaagcaaatccaagttcataagtctggagagttttgcaggttcaggttcccaaggcctatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtttgctctatactcataaaa +agacctacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacattgttgtcgcaggtgttcataccgcagca +gcaagaggaggcaacactgttatctgtgccacccaagggcaagatggggaagcagtccttgaggggaatgag +ggccttggcacctattgcggcgccccaattctgggccccggcaaggcacctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttgccacctggcacatatgaacctgcttacctagggggtaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagatcagttgagacccttcacggaacccaggggc +aaaccacctaggcctgcagttttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccac +catgttaagaaaaatgaccactggaatggggagtccttcactggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaaa +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggcctcatggacagcatgaaggcaagttgtatagctctcccttgtagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggaacattctttctgccgccatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgtcgtccaagctcactcttgtttt +tccttttacggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccactcggcctgataaaactgaaggtccccttgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggctggtttggaaaactggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccatacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggcgaggcctcactacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttctatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctaccccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctctcttgcagcccctgtagtcggtcaacaaaatattattga +tccctggattagaaataactttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttcttcttgatttggaattgggtcctgaacttaatccctatcttgcacatctgtctaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagattct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgctcctgccaatgccagacataagaaatgttttctaccatta +taatcagaacaatggt---cccaagcttaggcttgtagctatgctttatacccctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgggttttgacacgcccttctccagattttcagttcacttttct +ggtcccacctacagttgagtctaaaactaagaacttcacccttcctgttctcagggtctcagagatgacaaa +ctcaagg---ttccccgtcgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgtacgactgacggtgagctacttggcactaccatcttacagtctgtgtccatttgcaactt +taaag-----------------------------------------ggacaatgcaggcaaagc-------- +---------tgaatgaggagcc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagctacaaatcaccaacttggatggatcacctatagatccaacagatgatatgcctgc +tcctcttggcacaccagatttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------tga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcggtt---ta---------aatcaagctc +tagtgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggagtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctgccaaa +ctacggtgggcac-cttgcc------ctgaacaatcacttagccccagctgtgacaccactcttccctggag +agcagattttgttctttaggtcatacatcccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcctgctgccccaagagtggatcgagcacttctatcaggaagcggctccttccca +atctgacatcgcactggtaaggttcattaaccctgacacaggaagagtgctctttgaagctaaattgcacaa +acaaggtttcctcacaattgcagcatctggggatcaccctattgtgatgcccactaatggttatttcagatt +tgaagcttgggtcaaccccttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttcctcgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccattaatcagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaaccgcaggccttcaacaagccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgcagatgctgcaagaggtgcagtcaaagcgcctatgacacagatccttgattggaatggt +tccaggtattgggctcctaactctatgaagacaactggctattcaggtacatttgtctcccaaggcatta-g +aa-----------attcccctcatctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaacc---------------------------------- +-------------------------------------tattaaacctttgctatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----c---tccag-------------------acctaacactgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacaagtgactgggtcagaggcca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacgccaccatcgagcag +agcctca---tcac------------------------------aaggga---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcccatgt------------ttaatacccacaggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggat--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305649.1/1-7498 |Norovirus GII isolate Arg16075 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcatatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattggtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtagtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgatttcctagtgtacgctgatgcaccagaagtagagaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagcaggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ctacaggttctctgatagcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacatatgaccttgagtctgatg +gcaagggcaaagtcttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtacaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagattaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagattgctctggggctctgacttatccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcacttccagtccgagttggcatg +aatatgaatgaagatggtccaataatattcgagaaacactccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagataaaaccgagggacccctgattatcagtgaagatttgaac +ggtcttactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttaactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggagagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaatag +tccc--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtacaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcaaattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaactt----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------ga--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagaaca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305650.1/1-7506 |Norovirus GII isolate 101-4 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +cct-----------------------------acccccacccaacgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtaggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatacacggcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtgatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cctggacttagaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagagagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccacctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttgcacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaatcgctggtgcggcctttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacccgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---atctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcagctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagagaggaatggcaaatactcaatagaggagtacctccaagacagggacaggtac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgccccaccagaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtaagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgcctcttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagttatatgtgccacacaaggaagcgaaggtgaagccactcttgagggaggtgac +aacaagggcacctattgtggagcccccattttaggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctgggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaatcaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaagaaggcaaacacatgccaccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgcatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagtt-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccctgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcgccccgacaaaaccgaagggccgctggtaatcagtgaagacttgaat +ggtttgacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggatcaaaattcc +atcctcaggcagctatactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactgctgggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaacttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaagtggtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaacttccctattgataatctgagcgcagcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgtttttactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagagtatcgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgaaccaaatatgtgcttt +caggg-----------------------------------------gaacacttactagat----------- +-----------caacaaacagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacagcaacccccaggctatt +taaccatcattggcacatacaattggataatctaaatggaaccccctacgaccctgcagaggacataccagc +tcctttgggtacaccagacttccggggcaaagtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cctagaaat-----aaccactgaatc +tgatgactt---tgacccaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagattttcagcaatggtccttacctga +ctattccggtcag-tttact------cataacatgaacttagccccagctgtcgcccccaattttcctggtg +aacagcttcttttcttccgatcacagctgccat------cttctggtgggcg------gtcta--------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaagaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatgggtattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggttggagcctttatagcaggattggctggtgacatgctcacaaacactgtg +ggatctttggttaatgcagg---ggctagtgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttggattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +ttagagc----------------gaaccaggcccccaaa--------------------------------- +----------------------------------------------ctcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcactagcttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +ttagctc--------------------------------------gttgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcacagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------aat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305651.1/1-7521 |Norovirus GII isolate 282 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agg---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtatactcccc---agtatctcatctctccaaacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaaatccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgttttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggttactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gtaagggcaatgtgaaagtcgacagagttcagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagatataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctatctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaatttctatcatta +caaccaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctctcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccagcaatgggcactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaacctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacctct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +tacacctt-----------ctagt------------atttccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttatcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgcgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305652.1/1-7521 |Norovirus GII isolate 288 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtcttcgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactacgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagatataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctctcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccagcaatgggcactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacctct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +tacacctt-----------ctagt------------atttccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttatcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305653.1/1-7500 |Norovirus GII isolate 291 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctagaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaaaggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgagcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaagacagcttaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaacgagctggccggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaaggcacagggga--------ggttatcaacaaggacgggtgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagattcggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaactcatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcctaggggc +aaaccaccaaaaccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggcgcgctcaaggatgagttagttaaa +actgacaaaatctatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgttctctgaagttacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagcacagatataaagttggacccggagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaagggccccttgttatttctgaagacttaaat +ggtctgacattcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctaggaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaagaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagacttcgtgggaaagatccaaggcatgctttcccaaa------------------- +-----cc-----acaagaggggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaacaa---ccatcaaaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagcccctgccgttgcccccacttttccgggtg +agcaacttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagatacaggtagggtcctgtttgagtgcaagctccataa +atcgggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctatacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcgcaaattgaggccactcaaaaattgcaacagggtatgatgaaggttagacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaagatactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tg---------------------------------------g +tacacctt-----------ctagt------------acttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttatcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-cc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305654.1/1-7512 |Norovirus GII isolate 412SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcttgttttctaatat +gactgtcactttcaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +gtctctaa---------------accgccaagaccgccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtccgggctgcctgacttaacaactgtcacgcagcc +tgaggcgcaatgtacagcctatagcgtccccccactcagtcaaagagaggcgggcgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctaccactatgggctgtacgtggagcgtggccacgt +gcttggggtgcacaaaccacccgctgcgataagcatcgctaaaattgaattaacaccattgtccctttattg +gagggtggtttacacccccc---agtatttgatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttctggaccttaatgattcttggct +cag---caggagaatgatccaaagaactactggtttcttcaggccttaccaggagtggaacagaaagccctt +accaaccatggacgagcccaagatcaagaaagttgcaaacgccgtcctatgttctctctcttcgctctttac +cagacccattaaagacatcatcggtaagctaaaaccgatgaacatcctcaacatactggcaacttgtgactg +gacctttgcaggtatagtggaatcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgctatgatcgctcccttgctcggtgattacgagatgcagggccctgaggatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgtctacactcagggcttgcaaagacctaggggcttatgggttggaaatactcaaattagt +tatgaagtggttctttcccaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagatctagaggcaatagaaaacaaccatatgaccactctcctcaaggataaagacagtcttgccacata +catgagaacccttgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaagaattgcagcagcccggtcactagtccacaaagcaaaagaagaact +gtcaagcagacaaagacctgttgtcgtcatgatatctggcaggccgggtattgggaaaactcaccttgccag +agagctagccaaaaaggttgcaacaacactagcaggtgaccaaaggattggcctggtacccaggaatggtgt +ggatcattgggacgcctacaaaggagaaagagtggtgctgtgggatgactatggtatgagcaaccctataca +ggatgccctaagacttcaagaactggctgacacctgccctctaacacttaactgcgacagaattgaaaataa +gggaaaggtgtttgacagcgatgccataatcataacaaccaacctttcaaatccagcacccttagactatgt +caactttgaggcctg-ttccaggcgcatagacttcttagtatatgcagatgcaccagatatcgaaaaggcca +agcgcgatttccctggccaaccagacatgtggaaagaccattacagatcagacttctcacacatcaagcttc +aactggccccacagggcggttttgacaagaacggcaacaccccacatggtaagggtgtgatgaagtccctga +ctgttgggtcactgatcgccagagcctctggtctgctccatgaaagaatggacgaatttgagctacagggtc +ctggcctgtcaactttcaactttgaccgtaataaggtcgctgccttcagacagctggcagctgaaaataagt +atggcatgttggacacactgagagtaggaaaccagctaaagggtgtcaaaaccatggatgagctgaaacgag +ccatcaacaacatcaccatcaaaaagtgccagatagtatataatggatgcacctacactatggaatctgatg +gacatggcaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaacgagctcgcaggggccc +ttcaccacctcaggtctgcaagaataagatattatgtcaagtgcttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgtatga------acatctcaaacctatggt +cgaaaccacctgctgaagacaacgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgttgattccaaagacatcaaagtggaaggaaagaaaggtaaaaata +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagagtatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaggagtacctccaggatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggtcaaaatccgccaga +gaatcttccgtcctaccagaaagcaacggaaggaggagagagccactctcggactcgtcacggggtcagaaa +tcaggaagaggaacccagatgacttcaaaccaagaggaaagctgtgggctgatgatgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagtcaattttggttcgggctggg +ggttctgggtgtccc-caagccttttcataacttcaacccacgtgataccaaaggggatcacggaggctttt +ggtgtgcccatcagtcaaatacaaatccacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttggaagagggtgcccctgagggaaccgtcgcaaccatacttgtcaag +cggccgacaggggagctaatgcccttggctgccagaatgggaacccatgccacaatgaagatccaagggaga +atggtgggcggccagatgggtatgttgctcaccggctcaaatgccaagagtatggaccttggtacaacacca +ggtgattgtggatgcccttacatatacaagagaggcaacgattttgtggtcatcggcgtgcacaccgcagca +gcacgtgggggtaatacagttatatgtgctacacaagggaatgaaggtgaagccactcttgaaggaggggac +aacaagggcacttactgtggagcccccattctgggacctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggcgatcttccactgcaccactcccaccaggtacctatgagccagcgtacctaggtggaaaagaccca +cgagtgaagggaggtccgtccttgcaacaggttatgagagaccagctcaagcctttcactgaacccagaggg +aagccaccaaacccaagtgttcttgaatcggcaaaaagaaccatcatcaatgtcttggagcaaaccattgat +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacctccagcggttacccacat +catgtccgcaagaatgactactggagcggtgagacattcacaggcaaactggcggatcaagcttcaaaggca +aatcttatgtatgaggaaggaaaacacatgacaccggtgtacaccgcggctctcaaggatgaactggttaaa +actgacaaaatctatagtaagatcaaaaagagactgttatggggttctgacctctccaccatgattcgatgt +gctagggcattcggtggcctcatggatgaactcaaagcacactgcatcaccctccctgtcagggttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacacttaccattatgatgcagactac +t-cccgttgggattctacacaacaacgggcagtgcttgcagcagcacttgaaattatgg-tgagattttctg +ctgagccacaatt-ggcacagatagtggctgaggacctgctttcaccaagtgtggtcgatgtgggtgacttc +aaaattacaatcaatgagggccttccatccggcgtaccttgcacgtcccagtggaattcaatctcccactgg +ttgctcacattgtgtgctttatctgaagtaacaggactaggccctgacatcatacaggccaactctatgtac +tctttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaaattaactgcaaaactc +aaagagtatggtctcaagcccactcgtcctgacaaaactgaggggccactggtgattagtgaagatttgaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctcc +atcctcaggcaattgtattggacaaaaggacccaaccacgacgaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactaggagaatcctccctacatggaccctcattctacagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcggcccttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtctcacccaggaattccccagg +agaagttctcctaaatctagaattaggtcctgatttaaacccctatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcagggaacgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaatttcccagttgaattcttaagtcctgcccaaattactatgctcccacattt +gatagttgatgttaggacccttgaaccaattatgatacccctccccgatgtgagaaacaccttcttccatta +caacaataggccctct---gagcgcatgcgtttagtggccatgttgtacacacccctgagatccaacggttc +aggtgatgatgtcttcacagtctcatgcagagtactaactaggcctactccagattttgagtttacttacct +agttccaccctcagtggagtctaagacaaaacctttctcccttcccatcttaaccatttctgagttaactaa +ttcaagg---tttccagcacccattgactcgttgtttactgcccaaaacaacaatctcaatgtccaatgcca +gaatggtcggtgcacactggatggtgagttgcagggaactacccagctgctcccaactggaatatgtgcatt +cagag-----------------------------------------ggaaaatatcggcag----------- +-----------atgtgcaaa------------g---------------------------------ca---- +-------gtcacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggaaccccatttgacccaacagatgatgtcccagc +cccgcttggcacccccgatttcacgggtctgctgtttggagttgcaagtcaaa---gaaatgttggt----- +------------ggagcaggcaacaacactacc--------agg-----------gcccacgaggtagtgat +agcaacaactagcacacaatttgtaccaaaattgggctctgttaattttgga------------agtgaaag +tgatgattt---tcaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgagaccg---------ggcatccgtttagacaatgggacctacctaa +ctattctggagca-ttgacc------ctcaatatgaatcttgccccacctgttgccccaaacttcccaggag +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------cagtg--------- +--agggtatcattgactgcctgttgcctcaagagtggatacaacatttctaccaggaatccgctccatccca +atcagatgtggcactgatcagatatgtcaaccctgatacgggccgcactctctttgaggcaaaacttcacag +gactggttatattactgtttctcactctggtgactatcctctagttgttccttccaatggctatttcagatt +tgattcttgggtaaaccaattttactcactcgcccccatgggaactggtaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtctcgcaggtgacatgctcacctctgctgta +ggctcattggcgaatgccgg---agcaaatgccataacccagaaaattgactttgaaaacaataaacaa--- +------------------------------cttcaaacagcctccttccagcatgacaaggatatgctccgc +gcacaagtggatgcaaccaaacagctgcaggcagaaatgattgctatcaagcaagggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggagcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttactctgggcagttcacatcaacg--------- +cc--------------tgtgcatacaccaaattttaat---------------------------------a +ac----a----------------agcccaggcctcc---tgtcaa--------------------------- +------------------------------aacccagccctctccttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaactcaatcaactccactc---c-- +----------ctggat-----cctcttcttcgggttcatctgtttcttctgtctcaacacaatcaacaaaat +tgagttc--------------------------------------agtctcct------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gagcctcagtccttatatga---gcggggcccttaatatttcccatgtgacacctccgtcaagcag +ggcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------ttaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatt-------- +-------aat-tagttt---taat--tag---------------------------------gttaaattt- +-------aa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305655.1/1-7497 |Norovirus GII isolate 937 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaacacggccttcagtgtccccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactcttaagaaattgcacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agacgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaattctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctctgggacgactatgggatgagtaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagagtatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagttacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgcggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgat +ccatccgagaaatggtcattcacgcgagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgattgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtacgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtattggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggtgatgatgagattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggctcgacc--------cgc-----------gcccataaagctacagt +gagcactgggagtgttcactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccactttcccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacaccggtagggttctgtttgagtgcaagctccataa +aacaggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaaattgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggagcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tg---------------------------------------g +tacacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttatggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggtgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tg--------a-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305656.1/1-7517 |Norovirus GII isolate 946 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaacacggccttcagtgtccccccactcaaccagagggagaatagggatgctaaggagccact +aactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactcttaagaaattgcacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agacgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaattctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccattgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctctgggacgactatgggatgagtaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcatcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagagtatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagttacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtcttttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgat +ccatccgagaaatggtcattcacgcaagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgattgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtacgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttctatggtgatgatgagattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgtcatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggctcgacc--------cgc-----------gcccataaagctacagt +gagcactgggagtgttcactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccactttcccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacaccggtagggttctgtttgagtgcaagctccataa +aacaggctatgtcacagtggctcacactggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaaattgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggagcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tacacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccttacatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tg--------a-----t------cttt-----------c-ct----t--------t-ttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305657.1/1-7500 |Norovirus GII isolate 953 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacgacgtaaaatcttcaagtgacg---------------gagtgctttcaagcat +ggctgtcactttcaaacgag----ccctcggggcccggcccaaacagccg-cccccgagggaaaaaccaccg +aga---------------------cccccccgaccacccactcctgaactaata-------aggagcgtgcc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactggtcatc +cattacagtg----------ccaa---gggaggtgtctcgggtcttcccgaactctcgacggtcagccaacc +agaggaaaccaacacggcatttagcgttccccctcttaaccaaagggagaacagggatgctaaagagcccct +gaccggcaccattctagaaatgtgggacggggagatttatcattatggtttatatgtagagcgtgggttagt +acttggcgtgcacaaaccaccagcagccattagcctcgccaaagtggagctgacacctctgtctctatactg +gagaccagtgtacacccccc---agtatcttattcccccagacaccctaaagaaattacacggggagtcgtt +cccttacactgcctttgacaacaattgttatgctttctgttgctgggttttggacctaaacgactcctggtt +gtg---taggagaatgatacaaaggacaactggcttcttcagaccctaccaagaatggaacaggaagcctct +ccccactgtggatgactccaaaataaagaaggtggccaacatatttctgtgtgctttgtcctcactattcac +aagacctatcaaagacataattgggaagttaaggccactcaacatcttaaacattctggcttcctgtgactg +gacctttgcaggtatagtggaatcattaatccttctggctgaactcttc---ggagtgttctggacaccccc +agatgtgtctgcgatgatcgcccccctacttggtgactacgagcttcaaggacctgaagacctcgcggtgga +gctagtaccagtagtgatgggagggataggtttggtgctcggatttaccaaggagaagattgggaagatgct +ctcttctgcagcttcaacactcagagcttgcaaagatcttggtgcatatgggctggagatcctaaaacttgt +gatgaaatggttcttcccgaagaaggaagaggcgaatgaactagcaatggtgagagccatcgaggatgcagt +actagatttagaggcaattgagaacaaccacatgacagccctactcaaggataaagacagtcttgcaacata +catgagaaccctcgacctggaggaagaaaaggctagaaaactctccaccaagtctgcctcacctgacatcgt +gggtacgataaatgctctgttagcaaggatcgcagcagcccggtccctcgtgcacagagccaaagaagagct +gtccagtaggctgagacctgtcgtggtgatgatctctgggaagccaggcattgggaagacccaccttgctag +ggaactggcgaagaaaatcgctatgaccctcacaggggaccagagggtgggcttaatcccacggaacggtgt +ggaccactgggacgcgtataaaggtgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +cgatgctctcaggctccaagagttggctgacacttgccccttgacactgaactgtgacaggattgagaacaa +aggaaaggtctttgatagtgatgccataatcatcaccaccaacttggccaatccggcaccattggactatgt +caactttgaggcctg-ctccaggcgcattgactttcttgtgtacgccgatgcccccggggtcgagaaggcta +agcgtgacttcccaggacaaccagacatgtggaagaatgctttcagcccggacttctcacacatcaagctac +aactcgccccccagggtggctttgacaagaatggcaacaccccacacgggaaaggggtcatgaaaactctca +caactggttcccttattgcccgtgcctcgggtcttctccatgaaaggatggatgagtacgaacttcaaggcc +ccacccccacaaccttcaacttcgatcgcaacagagtgctggctttcagacaactcgccgctgagaataaat +acggcctggtcgacacaatgagggtagggggacaactcaaaggtgtcaaaactgtgtcagagcttaaacaag +cacttaagaacattgcaatcaaaagctgccagatagtgtatggcggcaacacatactcacttgaatctgatg +ggaagggtgtcgtgaaaatcgacaaagtccagaacaccaatatccaaactaacaatgaactttctggcgccc +tgcaccacctaaaatgtgccagaatcagatactatgtcaaatgtgtccaagagtccatctacaccatcctcc +agattgccggggccgcttttgtcacgacacgcatagcaagacgcatca------acatccagaacctctggt +cgaaaccacaaatagaagacacagagga--------caccactactaaggatggatgcccgaaacccaaa-- +-gac----gatgagg---agttcatcatctcatctgaagacatcaaggcagagggcaagaaggggaagaaca +agaccggtcgtggcaagaagcacacagcattctcgagtaaaggtcttagtgatgaagagtacgatgagtaca +agaggatcagagaagagcggaatggaaaatactccatagaagagtaccttcaacatagagacaagtac---t +atgaggaggtggccatagctagagcaactgaggaggacttctgtgaggaggaagaagcaaagatccggcaga +ggatattcaggccaaccaggaaacaacgtaaagaggaaagggcatcccttggtttggtaacaggctcagaaa +ttaggaagaggaatccagatgacttcaaacccaaaggcagattatgggctgatgatgacagaagtgttgact +acaacgagaagctcagcttcgaggccccaccgagtgtttggtcgcgaatagtcaactttggttcaggttggg +gcttctgggtctctc-caagcctattcataacatcaactcatgtcataccccatggtgctcaggaattcttt +ggagtgcccgtcaaacaaatccaaatacacaagacaggtgagttctgtcgtatgagatttccaaaaccaatc +aggactgacgtgacgggaatgatcctagaggagggagcccctgaaggaacagttgccacactgctcatcaaa +agaccaactggcgaactcatgccccttgccgccagaatgggcacacatgccaccatgaagatccaaggccgc +atggttggtggccaaatgggcatgctgctgacaggttccaacgctaagagcatggacctaggcacaacaccc +ggtgattgtggctgcccctacatctataagagaggaaatgactatgtggtcattggagtccacacagcagca +gctcgcgggggaaacactgtcatttgtgcaacccaggggagtgagggcgaagccacgcttgaaggtggagac +aacaagggaacctattgcggtgccccaatccttggtccaggaagtgcccctaagctcagcaccaagaccaaa +ttttggagatcctcaaacacacccctcccgcccggcacctacgaaccagcttatttgggtggcaaagaccca +agagtcaaagggggtccctcactccaacaagttatgagggatcaattaaagccattcactgaacctaggggc +aagccacctaaaccagatgtcttggaggccgccaagaaaaccatcatcaatgtgctagagcagacaatagac +ccaccccaaaaatggtcgtacgcgcaggcgtgcgcatcccttgacaagaccacttcgagtggccacccccat +catatgaggaaaaatgattgctggaatggagagaccttcacgggcaagctggcagaccaagcatcaaaggcc +aacttaatgtatgaagaggggaagaacatgaccccagtctacacaggggcactcaaagatgagttggttaag +actgaaaagatctatggcaaaatcaagaaaagactcttatgggggtcagacctagcaaccatgatcagatgt +gcccgggcctttgggggattgatggacgaacttaaggcacactgtgttgcgctccccatcagggttggtatg +aacatgaatgaggatggccccataatctttgagaaacattccagatacaagtatcactatgatgcagactac +t-cccgctgggattcaacacaacagagagctgtgctagccgcagccttagagatcatgg-tcaaattttcag +cagaaccaaactt-ggcccaaatagtggctgaggatctcttgtctcccagtgtgatggatgtaggtgacttc +aagataacaatcaatgaagggctcccctcgggggtgccatgcacttcacaatggaattccatcgcccattgg +ctcctcacactctgtgcactatctgaagtcacggatctgtctcctgacatcattcaagctaattctctattc +tccttctatggtgatgatgaaattgtgagcacggacatcaaagtggacccaggaaaactgacagcaaagctg +agggaatacgggttgaagccaacacgccctgataaaactgaagggcccctactcatctcagaggacctgaat +ggcctaaccttcctgaggagaactgtgacccgggacccagctggatggtttggtaaactggaccaaagctca +atactcaggcaaatgtactggactagaggacccaatcatgaagacccccatgaaacaatgatacctcactct +cagaggccaatacaacttatgtctctacttggtgaagccgccctacacggcccatcattttacagcaaaatc +agcaagctggtcatcacagaactaaaggaaggtggcatggatttttacgtgcccaggcaagagcccatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggccatggctcttgaacccgtggctggtgccgctttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgagtttacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtacgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcatttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatccaaaacaaaaccatttacccttccaatcctcacacttggggagctttccaa +ttctaga---ttcccagtgtctatagatcagatgtacactagccccaatgaagttatatctgtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccattacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtgcctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----agaatgccgctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +tcctacttatacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaatcaaccagtta---------------------------aatttaccccag- +--------ttggcctcaatgatactga------------------acattttaaccaatgggtggtccctag +atatgctggtgct-ctaaat------cttaacacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgtctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggctcttgtcagatacatcaacccagacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagcaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgatcgctggc +tgcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacatcttactctggaagatt------------------- +-----------------------cacatcgaccgctcc---------------------------------g +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggcct---------------tcgag +cggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------cacaacctcatc----------caattcg------ +-------------------------------actcgcagcacaaacctctcccagtcaacggtctctagggc +tacatc---------------------------------------taggactggtgaatgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ttaaaat--------gaatta +-------a-----tctt---accttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305658.1/1-7477 |Norovirus GII isolate 1034 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcctgtttacaaacat +gtcttctaccctaaagaaag----ccctcggggcacggcctaaacagcct-gtcccgagggacaactcacaa +aaa---------------------ccaccaaggccacccacgcctgagctgatt-------aaaaggatgcc +ccc-----------------------------ccccccgcctaacggtg------aagacgagccaaccgtt +aggtacgaag----------tcac---aaaaggggtatccggcctacctgagctcacgacagttacacaacc +agattcaaccaacacggcatttagtgtcccaccgttgagtctgagagagaacaaggaggctaaggagccgct +gaccggggcaatactggaaatgtgggatggagagatataccactatggtttgtatgtggagaaaggtcttgt +gctgggtgtgcacaaaccacccgcagccataagcatggcgaaggtggaaatgacaccgctttcgttatactg +gcgtgtggtgtacacccccc---agtatctcatttcccctgacacgctcaagagactcgatggagaggcgtt +cccatacaccgcttttgacaacaactgttacgccttttgctgctgggtgctagatcttaatgattcatggct +tag---taggagaatggtgcaaagaacaacaggcttcttcaggccctaccaggagtggaacaggaaacctct +gcccaccatggatgactccaagatcaagaaagtggcgaacatatttttatgctctttatctacactattcac +taggcccattaaagacattattggaaaaattagaccattaaatattttaaacattctggcaacatgtgattg +gacgttcgctgggatcgtggagtcgctaatcttgcttgctgagctcttt---ggagtgttctggacaccccc +agatgtgtctgcaatgattgcccccctacttggtgactacgagttacaaggacctgaggacatcgctgtcga +actcgtacccgtggtgatgggaggaatcggtttggtgttaggctttaccaaagagaagataggcaagatgct +gtcttcagcagcatcaacactcagagcctgtaaagaccttggggcctatggattggaaatactcaagctggt +tatgaaatggttcttccccaagaaagaagaagctagtgagctagccatggtgagggctatagaggatgccgt +gttggaccttgaggcaatagaaaacaatcacatgacgacactgctcaaagacaaagacagcctcgcaaccta +catgagaacactagaccttgaggaagaaaaagccaggaagttgtccaccaagtctgcatcccctgacatagt +tgggacaattaatgccctgttagcccgaatagcggcagccaggtcactggttcacagggccaaggaggaact +gtctagtagaatcaggccagttgttgttatgatgtctggtagaccaggtatagggaagacacacctggccag +ggaagtggcgaagaaggtggcatccaccctcacaggggaccagagggttggactcataccaaggaatggtgt +agaccattgggatgcatacaagggcgaaagggtcgtgctatgggacgactatggcatgagtaaccccattca +tgatgccctgcgcctgcaggagctggccgacacatgccccttaacattaaattgtgatagaattgagaataa +agggaaggtgtttgatagtgatgttataatcattacaacgaaccttgcaaatccagcccctcttgattatgt +caactttgaggcttg-ctccaggcgcattgacttcctggtttatgccgaagcaccggaagtggaaaaggcaa +agcgagacttccccggtcagccagacatgtggaaagatgcttttaaatcagacttctcacatattaaactac +aacttgcaccccagggaggctttgacaaaaatgggaacaccccacatggaaaaggtgtgatgaaaacactca +ccactggctctctgatcgctagggcgtcaggccttctacacgagagaatggacgagttcgaactccagggcc +cagcaatcaccactttcaacttcgaccgtaacaaaattgccgcgttcagacagttggctgcggaaaacaaat +atggaataatggacaccatgcggattggcaaccaactgaaaggggtgaaaactatggaggaacttaaacagg +caatcaagaacgtgtccatcaaaaggtgtcaaataatttacaatggctctacattcagtctcgagtctgatg +gcaaaggcaaggttttggtggagaagatcaaaagtgccactattcaaaccagtaatgaactggccggggctc +tgcgccacctcagaagtgccagaataaggtattatgtgaaatgtgtgcaagaagctatctactctattcttc +agattgctggtgccgcattcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggg +caaaaccaccaat---agaccaggatga--------atcagagcctagagaagagaaccctaagttggag-- +-gac-------gatg---aattcatcatatcatctaaagacatcaaggaagaaggcaagaagggcaagaaca +aaactggccgtggcaagaaacacaccgcattctctagcaagggcctaagtgatgaggagtatgatgagtaca +agaggataagagaggaaagaaatggtaagtactctattgaagaatacctccaggacagagacagatac---t +acgaggagctcgccattgctaaggctactgaagaggacttctgtgaggaagaggagatcaaaattcgccaga +ggatctttcgccccacaagaaaacaaaggaaggaagaaagggctacgttaggactggtgactggttcagaaa +tcagaaggaggaaccctgatgatttcaagcccaaaggaaagctgtgggctgacgacaacagaagtgtcgact +acaatgaaaaactggatttcgaggcccccccgagcatttggtctagaatcgtcagttttggctcaggttggg +gtttctgggtgtcac-caagcctgtttataacatcaactcatgtgattccttctggtataacagaggtgttc +ggagtgcccgttaagcaagtccaaattcacaagtcaggcgaattttgccgcttcagatttccaaaaccaatc +agaacagatgtgacaggaatgatcctagaagagggggctccagaaggcaccgtggcgaccatcctcatcaaa +cgccccaccggcgagctcatgccacttgctgccagaatggggacgcacgcaaccatgaaaattcagggacgc +atggtcggtggacagatgggcatgttgctcactggttcaaacgccaaaggcatggatttagggacaactccc +ggagactgcggctgcccgtatatttacaagagaggtaacgattacatcgttatcggagttcacacagcagcc +gcccgtggagggaacactgtcatctgtgctacacaagggagtgaaggtgaagcaacacttgagggtggagat +gataaagggacatattgtggggcacccatccttggtcctggtggggcaccaaaattgagcaccaagaccaaa +ttctggagatcatcaaacacacccctcccaccggggacatatgaacctgcttaccttgggggccgtgaccca +cgtgttaagggcgggccctccctgcaacaagtcatgagggaccaactgaaaccatttaccgaacccaggggt +aaacctccaaaacccagtgtcctagaggcagccaaacaaaccatcattaatgtcctggaacagaccctggac +cccccacaaaagtggacttacgcacaggcgtgcgcatcacttgacaaaaccacctctagcgggcacccccac +cacacccgaaagaatgagttttggaatggagagactttcaccggcaaactagcagaccaagcatcaaaagcg +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacggcagcccttaaggatgagctggtcaag +acagacaagatttatgggaagatcaagaaaaggttgctgtggggttctgatctgtccactatggtccggtgt +gcaagagcttttgggggactcatggaggagatgaaggcccactgcatatcactcccaatccgtgttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccaggtataaatatcattatgatgcagattac +t-cccgatgggactccactcaacagagagatgtgttagctgcagctatggaaataatgg-ttaggttctccg +ctgaaccacaact-atcacaaaaagtggctgaagatttgttggcccccagtgtggtggacgtcggagacttt +aaaatttcaataaatgaagggctcccatccggtgtcccgtgcacctcacagtggaattccatcacacattgg +cttctaactctctgtgctctgtctgaaactaccaacctgtctcctgacatcatacaggcaaattccatgttc +tcattctatggtgatgacgagatcgttagcaccgacatcaaattggatccggaaaaattgaccacaaaattg +agagagtatggcttgaaaccgactcgtccggataaaacagaaggacctctaatcattagtgaggatttggat +ggactcaccttcctccgaagaacagtctcccgtgatccagctggttggtttgggaaattggatcaaagttca +atactcaggcaaatgtactggaccagaggacccaaccatgaagaccccaatgaaacaatgatacctcactct +cagaggcccatacaactcatggccctacttggtgaagcctctctacacggaccctctttttacagcaaaatt +agcaaattggtcataactgaactcaaggaaggtggaatggatttttacgtgccaagacaagagcctatgttc +aggtggatgagattctctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaataatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaatttacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gatcattgatgttagaaccttagaacctgtgctgctcccaatgcctgatgtcagaagcaccctttttcactt +caatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgttctaatggttc +tggtgacgacgttttcaccgtctcatgtaggatccttactaggccctcccctgaatttgatttcacatactt +ggtgccaccaacagtggaatcaaagactaagccattcacactacctgtgctgacactgggagaactgtccaa +ctctaga---ttccctctctctattgatgaaatggtcaccagccccaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggaactgttaggcacaacccaactgcaagcatgtaacatttgctccat +aaggg-----------------------------------------ggaaagtgacaggac----------- +-----------aggtccc------------------------------------------------ta---- +-------atgaac----------------------------------aacat-------------------- +-------atgtggaacctggagatcacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgattttgcaggtgaggtctttggtgtactcagccaga---gaaataga-------- +------------ggtgaaagcaacccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caatgatgt---tgaa---aaccagccaacaa---------------------------aattcaccccaa- +--------ttggtttg---------aatgaggtcgccaatggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctgaca------ttaaatatgaatttagcccctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttatgtccca------ttaaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctaccaggaatctgccccatctct +tggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagtactagcacagggcctgttgtggtcccagccaatggctatttcaggtt +tgactcctgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaattg +caacaaa---------------------------------attcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcactagattggagtggc +actaggtactgggcccctggttcaatgaagaccaccagctattctggaaagtttgtgtccatg--------- +aa---------------------tcctgttaggcaggttgagttcccgc---------------------ag +cccaaaa----------------agagtgcggccataccatc--------aagcgc---------------- +------------------------------cagctctgtgtcttctggtagg------------------ac +caatctta-----------caaat------------tctacccaatcaactgttgtta-------------- +----gcacttcctcag-----tgccaccttc------taggggttcttc----------------------- +------------------------tgccccttctactctgtc------aaggg------------------c +cacaac---------------------------------------tagaacttccaattgggttgaggagca +aaacaggaatttggaaccctatatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcgtct---agca------------------------------atggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgctt +accttcgtaagaagggggagtcaca--------agtttag--t-----------gaaaagataatt------ +---a-a-tga-ttaa-----ta-------------------------------------------------- +-------------attg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305659.1/1-7507 |Norovirus GII isolate 1047SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcactttcaaacggg----ccctcggggcgcggcccaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaactggtc-------aaaaatatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcctacagcg----------ccaa---aggtggcgtttccggcctgcctgaactcaccactgtcagacaacc +ggaagaaaacaacacggcgttcagtgttcccccactcaaccagagggagagtagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatataccattacggtctgtacgtggaaaaaggtctcat +acttggtgtgcataagccacctgcagccatcagccttgccaaggttgagctgacaccactttctctgttctg +gagacctgtgtacacccccc---agtatctcatttctccagacactcttaggagactgcatggagaatcatt +cccctacacagcatttgacaataattgctacgccttctgttgttgggtgttggaactaaacgattcatggct +aag---taggaggatgatccagagaacaacaggtttcttcagaccatatcaagactggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgtactctgtcttcgctattcac +cagacccatcaaggacataatagggaagctaaaacctcttaacatcctcaatattttggccacatgtgattg +gaccttcgcaggcatagtggaatccctattactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actcgtcccagtagtgatgggggggataggtttggtgctaggattcaccaaagagaaaattgggaagatgtt +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagttggccatggtgagagccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaattctcttctggcaaggatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggtcaagacctgttgttgtgatgatatcgggaaaaccaggaatagggaaaactcaccttgccag +ggaactggctaagaagatcgcggcttccctcacaggggaccaacgtgtgggcctcataccgcgcaatggtgt +tgaccattgggacgcatacaagggagaaagggtggtcctatgggatgactacggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgtcccctcacgctgaactgtgacaggattgagaacaa +aggaaaagtttttgacagtgatgctataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgaggcgcattgacttcctcgtgtacgcagatgctcctgatgtagagaaggcaa +aacgcgacttcccaggccagcccgacatgtggaagaacgctttcagtcccgacttctcacacataaaactgt +cactggccccacagggtggcttcgataagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggctcccttatcgcccgagcatcagggttgctccatgaaaggctagatgaatatgagttgcagggcc +cgcctctcaccactttcaactttgaccgcaataaggtccttgctttcagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaagcaag +ctctcaaaaatgtctcgatcaagaagtgtcaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtaatgtgaaggttgacaaagtacaaagtgccaccgtgcaaaccaacaatgaactaactggtgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggcactgtattccatcatcc +aaattgctggggctgcgttcgtcaccgcgcgcatcactaagcgtatga------acatacagaatctctggt +ccaagccacaggtagaagacacagaaga--------gacggccaacaaagaaggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcatttcatccgacgatataaaaactgagggtaagaaagggaagaaca +agactggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaaggatcagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagataagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagccaaaatccggcaga +ggattttcaggccaacaaggaaacaacgcaaagaagagagggcctctcttggtttagtcacaggatctgaaa +tcagaaaaagaaacccagaagacttcaaacccaagggaaaactgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagctccaccaagcatctggtcgcggatagtcaattttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggaatccccatcaaacaaattcagatacacaaatcaggcgaattctgccgattgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagagggtgcacccgaagggaccgtggtcacactactaatcaag +aggccaactggagaactcatgcctctggcagctagaatggggacccatgcaaccatgaagattcaagggcgc +acagttggggggcaaatgggcatgcttctgacagggtccaacgccaaaagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaaaaggggaaatgactacgtggtcattggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagctacacttgaaggtggtgac +aacaagggaacctactgtggtgcgccaatcttgggtccaggaagtgccccaaaactcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactaaaaccatttacagaacccaggggc +aagccgccaagaccaagtgtgttggaagctgccaagaagaccattatcaatgttcttgagcaaacaattgac +ccaccccagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggactcctttacaggcaaattggcagatcaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacccctgtctacacaggtgcacttaaggatgaattggtcaaa +actgataaaatttatggcaagatcaagaagaggctcctgtggggctcagacctggcgaccatgatccggtgc +gctcgagcctttggaggccttatggatgaacttaaggcacactgtgttacgcttcctgttagagttggtatg +aacatgaatgaggatggccctatcatctttgagaagcactccagatataaatttcactatgatgctgattat +t-cccggtgggactcaacacaacaaagagatgtgctagcggcagccctagaaatcatgg-tcaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctctcccccagtgtaatggatgtgggtgatttc +caaatctcaataagtgagggactcccctccggggtgccttgcacctcccaatggaattccattgcccattgg +ctcctcactctttgtgcgctctctgaagtcacggacctgtcccctgacatcattcaggccaattcccttttc +tccttttatggtgatgatgagattgtgagcacagacataaagttggacccagagaaactgacagcaaaactc +aaagagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaaatctggat +ggcctgacattcctacggagaactgtgacccgtgacccagctggctggtttggaaaattggagcagagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcgttttatagcaaagtt +agcaagttagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccagtggcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagtttacagtctcacccagaaactctcctgg +agaaattctcttaaatctggaattgggtcctgatttgaatccgtatttggcacacctatctagaatgtataa +tgggtatgctggtggcgtagaagtccaagtcctcctagcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaattaccatgttgccacattt +aatagttgatgttagaacccttgaacctatcatgataccactcccagatgtcaggaacaccttcttccatta +caacaatcaacctgcc---aatcgcatgcgattggtggccatgctgtatacccccttgagatctaatggttc +tggtgatgatgtcttcacagtgtcatgtagagtgctaactaggcccaccccagattttgagtttacatattt +ggtccccccttcggtagagtccaagaccaaacccttttctctgcccatattgaccatctctgaattgaccaa +ctcaaga---ttccctgtaccggtggattcattgttcacagcccaaaacaacaatctcaatgtccagtgtca +aaatggtcgttgcacactggatggtgagttgcagggaaccactcagttacaaccatcaggcatctgcgcctt +tagag-----------------------------------------gcaaaataacggcagatgtgc----- +----accatagccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcac----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgatccaacagaggatgtgccagc +tccactgggcactccagacttcacaggccttctctacggagttgcgagccaaa---ggaatg---------- +-----tt-----caacccaacccaaacaccacc--------aga-----------gcacatgaagctgtgat +ctccacaaccagttcgcagtttgtgccaaaattagggtcaatcaactttggta------------gcacaag +tgaagactt---cgtcgtgggccaacctacca---------------------------aattcacaccag- +--------ttggtatt---aagattgagactggac---------atgatttcgatcaatggaccctacctag +atattcaggccat-ttgaca------ctcaatatgaaccttgccccacccgttgctccaaatttccctggtg +aacagttacttttcttcagatcaaacgtcccct------gtgccggtggcgt------cagtg--------- +--atggtatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatatgtcaaccctgacacgggtcgtacactctttgaggcgaaactccacag +aacgggctacatcactgttgctcattcaggtgactatccccttgttgtcccctccaatggatattttagatt +tgactcttgggtgaaccagttttactcactcgcccccatgggaactgggaatgggcgcagg---------cg +gatgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggttcactggtgaatgccgg---ggccaatgctatcacccaaaaggtggactttgaaaataacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgaaatgatcgccatcaagcaggggatattgaccgcaggc +ggcttttcccctactgacgcggcgagaggagcagtgggtgcacccatgaccaaagtccttgattggtccggt +actcgttactgggctccaaattccacgcggacaactggctattcagggcagttcacatcaaca--------- +cccgtgcatatgcccacaaagacaactcagcctgctcc---------------------------------t +gcaaaaa----------------ggactcaacccccttcttcctcttcag---------------------- +---------------gt--agcatttatagtctttcaacacagagtactgttttgaccaagccttcttcagg +ctcctctt-----------ctgtt------------tcttctgcttctacacaatctacaca---------- +----------------------------------------------------------------------at +tgagttc--------aatttctt------------------------------------------------c +aatgga---------------------------------------tagaacagaaaattgggt---aaatca +gcaaagaagtctcagcccctacatga---gtggtgcacttaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------caggaa---cagtctcaactgtacccaa +agaagttttgga-ctcctggacatctgcat------------tcaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaac--------- +---c-a-a-t-taattt---taa---tt------agt-tgtgattga-gt-tcta------------aatt- +---------------gg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305660.1/1-7512 |Norovirus GII isolate 1109SR nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcttgttttctaatat +gactgtcactttcaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggagaaacaaagcaa +gtctctaa---------------accgccaagaccgccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaagacgagccaaaagtg +gtgtacaagg----------tggg---agaaggtgtgtccgggctgcctgacttaacaactgtcacgcagcc +tgaggcgcaatgtacagcctatagcgtccccccactcagtcaaagagaggcgggcgacgcgaaggaaccatt +acctggctccatcttggagatgtgggatggtgagatctaccactatgggctgtacgtggagcgtggccacgt +gcttggggtgcacaaaccacccgctgcgataagcatcgctaaaattgaattaacaccattgtccctttattg +gagggtggtttacacccccc---agtatttgatagctccagacactttgaagaacctgaatggagaatcatt +cccatacacggcttttgacaacaactgctatgctttttgctgctgggttctggaccttaatgattcttggct +cag---caggagaatgatccaaagaactactggtttcttcaggccttaccaggagtggaacagaaagccctt +accaaccatggacgagcccaagatcaagaaagttgcaaacgccgtcctatgttctctctcttcgctctttac +cagacccattaaagacatcatcggtaagctaaaaccgatgaacatcctcaacatactggcaacttgtgactg +gacctttgcaggtatagtggaatcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgctatgatcgctcccttgctcggtgattacgagatgcagggccctgaggatcttgccgtgga +gctcgtgcccgtggtaatgggagggataggtctggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgtctacactcagggcttgcaaagacctaggggcttatgggttggaaatactcaaattagt +tatgaagtggttctttcccaagaaagaagaggccaacgagctggccatggtaagggccattgaggatgctgt +gttagatctagaggcaatagaaaacaaccatatgaccactctcctcaaggataaagacagtcttgccacata +catgagaacccttgacttggaggaagagaaagcaagaaagctctccaccaaatctgcatcaccagacatcgt +gggcacaataaactcactgttggcaagaattgcagcagcccggtcactagtccacaaagcaaaagaagaact +gtcaagcagacaaagacctgttgtcgtcatgatatctggcaggccgggtattgggaaaactcaccttgccag +agagctagccaaaaaggttgcaacaacactagcaggtgaccaaaggattggcctggtacccaggaatggtgt +ggatcattgggacgcctacaaaggagaaagagtggtgctgtgggatgactatggtatgagcaaccctataca +ggatgccctaagacttcaagaactggctgacacctgccctctaacacttaactgcgacagaattgaaaataa +gggaaaggtgtttgacagcgatgccataatcataacaaccaacctttcaaatccagcacccttagactatgt +caactttgaggcctg-ttccaggcgcatagacttcttagtatatgcagatgcaccagatatcgaaaaggcca +agcgcgatttccctggccaaccagacatgtggaaagaccattacagatcagacttctcacacatcaagcttc +aactggccccacagggcggttttgacaagaacggcaacaccccacatggtaagggtgtgatgaagtccctga +ctgttgggtcactgatcgccagagcctctggtctgctccatgaaagaatggacgaatttgagctacagggtc +ctggcctgtcaactttcaactttgaccgtaataaggtcgctgccttcagacagctggcagctgaaaataagt +atggcatgttggacacactgagagtaggaaaccagctaaagggtgtcaaaaccatggatgagctgaaacgag +ccatcaacaacatcaccatcaaaaagtgccagatagtatataatggatgcacctacactatggaatctgatg +gacatggcaaagtgttagttgacaaagtgcaaaacacaacagttcaaaccaacaacgagctcgcaggggccc +ttcaccacctcaggtctgcaagaataagatattatgtcaagtgcttccaagaggcaatctactccctactcc +aaattgctggtgcagcttttgtcacctcacgcatagtgaggcgtatga------acatctcaaacctatggt +cgaaaccacctgctgaagacaacgatga--------atcagaggacaaaggagggtgtcccaaacccaga-- +-gat----gaggatg---agttcaccgttgattccaaagacatcaaagtggaaggaaagaaaggtaaaaata +aatctgggagaggaaagaaacacacagctttctccagcaagggcctcagtgatgaagagtatgatgagtaca +aaagaatcagagaagaaagaaatggcaagtactcgatagaggagtacctccaggatagggacaggtat---t +atgaggaacttgccattgctaaagccactgaggaagacttttgtgaagaggaggaggtcaaaatccgccaga +gaatcttccgtcctaccagaaagcaacggaaggaggagagagccactctcggactcgtcacggggtcagaaa +tcaggaagaggaacccagatgacttcaaaccaagaggaaagctgtgggctgatgatgacaggagtgtggatt +ataatgagaaaataagttttgaagcaccaccaagcatctggtcaagaatagtcaattttggttcgggctggg +ggttctgggtgtccc-caagccttttcataacttcaacccacgtgataccaaaggggatcacggaggctttt +ggtgtgcccatcagtcaaatacaaatccacaagtcaggagagttctgtcgcctgaggttcccaaaacccatc +aggacggatgtgagtgggatgatcttggaagagggtgcccctgagggaaccgtcgcaaccatacttgtcaag +cggccgacaggggagctaatgcccttggctgccagaatgggaacccatgccacaatgaagatccaagggaga +atggtgggcggccagatgggtatgttgctcaccggctcaaatgccaagagtatggaccttggtacaacacca +ggtgattgtggatgcccttacatatacaagagaggcaacgattttgtggtcatcggcgtgcacaccgcagca +gcacgtgggggtaatacagttatatgtgctacacaagggaatgaaggtgaagccactcttgaaggaggggac +aacaagggcacttactgtggagcccccattctgggacctggcaacgcaccaaaattgagcaccaaaacaaaa +ttctggcgatcttccactgcaccactcccaccaggtacctatgagccagcgtacctaggtggaaaagaccca +cgagtgaagggaggtccgtccttgcaacaggttatgagagaccagctcaagcctttcactgaacccagaggg +aagccaccaaacccaagtgttcttgaatcggcaaaaagaaccatcatcaatgtcttggagcaaaccattgat +ccaccccaaaagtggacatatgcccaggcatgtgcatctcttgacaaaacaacctccagcggttacccacat +catgtccgcaagaatgactactggagcggtgagacattcacaggcaaactggcggatcaagcttcaaaggca +aatcttatgtatgaggaaggaaaacacatgacaccggtgtacaccgcggctctcaaggatgaactggttaaa +actgacaaaatctatagtaagatcaaaaagagactgttatggggttctgacctctccaccatgattcgatgt +gctagggcattcggtggcctcatggatgaactcaaagcacactgcatcaccctccctgtcagggttggcatg +aacatgaatgaagatggaccaataatatttgagaaacactccagatacacttaccattatgatgcagactac +t-cccgttgggattctacacaacaacgggcagtgcttgcagcagcacttgaaattatgg-tgagattttctg +ctgagccacaatt-ggcacagatagtggctgaggacctgctttcaccaagtgtggtcgatgtgggtgacttc +aaaattacaatcaatgagggccttccatccggcgtaccttgcacgtcccagtggaattcaatctcccactgg +ttgctcacattgtgtgctttatctgaagtaacaggactaggccctgacatcatacaggccaactctatgtac +tctttctatggtgatgatgaaattgtgagcactgacataaaattggacccagaaaaattaactgcaaaactc +aaagagtatggtctcaagcccactcgtcctgacaaaactgaggggccactggtgattagtgaagatttgaac +gggttgacattccttcgccgcactgtgacccgtgatccagcaggctggtttggaaaactagatcaaagctcc +atcctcaggcaattgtattggacaaaaggacccaaccacgacgaccccagtgaaaccatgataccacatgca +cagaggcccgtacaactcatggcactactaggagaatcctccctacatggaccctcattctacagcaaagtt +agtaaattggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcgggcctcgtcccagagatcaacaccga +gacccttcccctggaaccagtggctggtgcggcccttgctgcggctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcactgtctcacccaggaattccccagg +agaagttctcctaaatctagaattaggtcctgatttaaacccctatttggcacacttatctagaatgtacaa +tgggtatgctggtggagtggaggtccaggttctcctagcagggaacgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccgccaaatttcccagttgaattcttaagtcctgcccaaattactatgctcccacattt +gatagttgatgttaggacccttgaaccaattatgatacccctccccgatgtgagaaacaccttcttccatta +caacaataggccctct---gagcgcatgcgtttagtggccatgttgtacacacccctgagatccaacggttc +aggtgatgatgtcttcacagtctcatgcagagtactaactaggcctactccagattttgagtttacttacct +agttccaccctcagtggagtctaagacaaaacctttctcccttcccatcttaaccatttctgagttaactaa +ttcaagg---tttccagcacccattgactcgttgtttactgcccaaaacaacaatctcaatgtccaatgcca +gaatggtcggtgcacactggatggtgagttgcagggaactacccagctgctcccaactggaatatgtgcatt +cagag-----------------------------------------ggaaaatatcggcag----------- +-----------atgtgcaaa------------g---------------------------------ca---- +-------gtcacc----------------------------------aagaca------------------- +--------ggtggcacatgcagttgacaaatctcaatggaaccccatttgacccaacagatgatgtcccagc +cccgcttggcacccccgatttcacgggtctgctgtttggagttgcaagtcaaa---gaaatgttggt----- +------------ggagcaggcaacaacactacc--------agg-----------gcccacgaggtagtgat +agcaacaactagcacacaatttgtaccaaaattgggctctgttaattttgga------------agtgaaag +tgatgattt---tcaagtgggcccaccaacca---------------------------aattcacaccag- +--------ttggaatca---aagttgagaccg---------ggcatccgtttagacaatgggacctacctaa +ctattctggagca-ttgacc------ctcaatatgaatcttgccccacctgttgccccaaacttcccaggag +agcagctgctcttctttagatcaaatgttcctt------gtgctggtggtgt------cagtg--------- +--agggtatcattgactgcctgttgcctcaagagtggatacaacatttctaccaggaatccgctccatccca +atcagatgtggcactgatcagatatgtcaaccctgatacgggccgcactctctttgaggcaaaacttcacag +gactggttatattactgtttctcactctggtgactatcctctagttgttccttccaatggctatttcagatt +tgattcttgggtaaaccaattttactcactcgcccccatgggaactggtaatgggcgcagg---------ag +agtgc---------agtaatggcaggagcttttatagcaggtctcgcaggtgacatgctcacctctgctgta +ggctcattggcgaatgccgg---agcaaatgccataacccagaaaattgactttgaaaacaataaacaa--- +------------------------------cttcaaacagcctccttccagcatgacaaggatatgctccgc +gcacaagtggatgcaaccaaacagctgcaggcagaaatgattgctatcaagcaagggatcttgaccgctggc +ggcttctcccctgctgacgcagcaagaggggctgtaggagcacccatgaccaaggtgcttgactggtctggc +acacgctattgggcaccaaattctaccaaaacaacaagttactctgggcagttcacatcaacg--------- +cc--------------tgtgcatacaccaaattttaat---------------------------------a +ac----a----------------agcccaggcctcc---tgtcaa--------------------------- +------------------------------aacccagccctctccttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaactcaatcaactccactc---c-- +----------ctggat-----cctcttcttcgggttcatctgtttcttctgtctcaacacaatcaacaaaat +tgagttc--------------------------------------agtctcct------------------c +tatgag---------------------------------------tagaacagcagattgggttaatcaaca +aag---gagcctcagtccttatatga---gcggggcccttaatatttcccatgtgacacctccgtcaagcag +ggcttca---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------ttaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaacc-------- +-------aat-taattt---taat--tag---------------------------------ttgaaattt- +-------aa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305661.1/1-7521 |Norovirus GII isolate 1115 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactgatc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcag---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaaccagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggccttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaataccactctccttgttctg +gagacctgtgtatactcccc---agtatctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaatgtattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaggctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcatacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagagctcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagcgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtctacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcaaaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacagggacgggtgctcaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatcttcaggccaacgaggaaacaacgcaaggaggaaagggcctctctcggcctagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgatagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcaggtacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagagcttatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggtaccacacca +ggtgactgcggctgcccctacatctacaagagggaaagtgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtagggacccc +agagtcaaggatggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcattcacgcaagcttgcgcgtcccttgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgattcggtgc +gctcgagcattcgggggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtattggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttattgcagagttaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccctgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaatttttatcatta +caatcaatcagatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagcgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------ca---- +-------gtcatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgagagaggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactggaagtgtccactttactccaaagctgggcagtgtccaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------agttcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccacttttccgggag +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccacaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacaccggcccgcatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacagattgaggccactaaaaagttgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacacacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tgcacttt-----------ctagt------------actcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305662.1/1-7521 |Norovirus GII isolate 1123 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaaggtccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtagtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaaccagagggaaaatagggatgctaaggagccatt +gactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggccttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataataggtaagctaaggcctcttaatatccttaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacctgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgcaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggtttttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgccctgctggcgaggatcgctgctgcgcgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcatacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagggttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaagggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggctaggattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaagctgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gtttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggcctactggagaacttatgcccttagcagccaggatggggacccatgcaaccatgaaaatccaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatctcggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccagggga +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgat +ccacccgagaaatggtcattcacgcaagcttgcgcgtctcttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggtaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaaaaacatgaccccagtctacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacaaatatcactatgatgctgattac +t-ctcggtgggactcaacacaacaaagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttaaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacattct +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaagttagttgttgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaaccagtgttgatccccttacctgatgttaggaataacttctatcatta +caatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggttcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +taatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagctcctgccgttgcccccactttcccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaacctggattgcctactcccccaggaatgggtgcagcatttctaccaagaagcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +attaggctatgtcacagtggctcacactggcccgcatgatttggttatccccccaaatggttacttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgcaga---------cg +tgcgt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctgcaacaggcttccttccaacatgataaggacatgctccaa +gcacaaattgaggccactaagaaactgcaacagggtatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tacaattt-----------ctagt------------actcccactgctattt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctcttaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305663.1/1-7494 |Norovirus GII isolate 10010 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagtcaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcctggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgactttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctctaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgaacccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttgggaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccatcgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +tagtgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaaccacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttggacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305664.1/1-7493 |Norovirus GII isolate 10590 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +tcc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccactaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtacttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaatcaaagatttgttaggcaaacttaaaccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctggggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccttggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctgcataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctatagaggagagagggtggtcttgtgggacgactacggtatggggagccctgtaaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggcaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaacttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtttacactctcatac +aggttgccggagcgtcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttttctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaggaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgctctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacaccgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctaggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggagggaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttgggaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgctcctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacgtcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatctgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggttttctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcctg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacctaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305665.1/1-7493 |Norovirus GII isolate 10600 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccactaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcttcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtacttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaatcaaagatttgttaggcaaacttaaaccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtttctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctggggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccttggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctgcataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctatagaggagagagggtggtcttgtgggacgactacggtatggggagccctgtaaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggcaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaacttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtttacactctcatac +aggttgccggagcgtcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttttctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaggaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgctctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacaccgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctaggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggagggaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttgggaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggagtggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgctcctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ctcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacgtcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatctgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggttttctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcctg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatctttcagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgtttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacctaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305666.1/1-7493 |Norovirus GII isolate 10609 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccactaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcttcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtacttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaatcaaagatttgttaggcaaacttaaaccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtttctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctggggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccttggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctgcataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctatagaggagagagggtggtcttgtgggacgactacggtatggggagccctgtaaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggcaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaacttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtttacactctcatac +aggttgccggagcgtcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttttctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaggaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgctctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacaccgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctaggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggagggaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aatctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttgggaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggagtggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgctcctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ctcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacgtcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatctgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggttttctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcctg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatctttcagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgtttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacctaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305667.1/1-7494 |Norovirus GII isolate 10738 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagacctcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgtggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaaaaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagacccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggtca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305668.1/1-7494 |Norovirus GII isolate 10744 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaagttggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcaatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagacctcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgtggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaaaaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ctggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggtca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +ggttc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggagcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305669.1/1-7494 |Norovirus GII isolate 10745 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagaacacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacactaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagtctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgctgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgagcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgccgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggagtacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaacgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagct +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggttcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacattgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +aaggagtacggcctggttccaacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaacgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgactgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttt------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305670.1/1-7493 |Norovirus GII isolate 10746 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccgaacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaagccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagacctcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacaggactcgtactggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgtggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcccaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaaaaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggagtggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctgactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgagtgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttggcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggtca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttacaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305671.1/1-7493 |Norovirus GII isolate 10995 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtgtagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggaccagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaaactaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggaattttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcttatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctctctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaagttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cctaaacttaggcttgtagctatgctttacactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtggatagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gtttcccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305672.1/1-7490 |Norovirus GII isolate 11085 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaat---------gaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaggagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtttccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgcacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacagctcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305673.1/1-7490 |Norovirus GII isolate 11086 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaat---------gaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaggagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtttccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgcacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacagctcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtgcccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305674.1/1-7494 |Norovirus GII isolate 11087 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttacaacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcacctgacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtgcaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaggaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agatccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccataccgcagca +gcccgagggggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggtcaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtctctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ca---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305675.1/1-7463 |Norovirus GII isolate 11157 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------aataatgccgccccttctaacaaagaagaggt------tggtgcattatccaacat +caaagttggattcaagaaaa----tgctgggtgtcgtacccaagggtacc-------------aaaacaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgacg----------caaagtcagaaactataattgggttgccagacttaacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccactactccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---actacttggtctcccctgacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttacaacttctgttgctgggtgttagagctcaacgacacgtggct +taa---cagaagatgtatttccagaactaccggcttcttcaaaccatgccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaaaatcaaaaaagtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaagacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggtcctcggtttcaccgctgagaagataggccgcatgct +atcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaagaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +tggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcaggcctggcattggaaagacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactgcaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgccccttgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagggacttccctggccagcctgatatgtggaaagaccactttaagccagacttctcccacatcaagctga +ccctagccccccagggggggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggcctcgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaactg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaatg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgtttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttttgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaggaaaggaacggaaagtattccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttaatcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaagcaaatccaagttcacaagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccgattctgggccctggcaaggcgcctaaactcagcacaaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacttaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaagaccacctctagtggtaacccccat +cacgctaggaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctataagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgt +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgataaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaactcaacaaaggagcattctttctgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgtcggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaactcaatagcacactgg +atcctaactttgagcgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagattgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgacaaaactgaaggtcccctagtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactcg +atcctgaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctacaggtgagttcacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgcatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgctagctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaataacttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaacaactc +tggtgatgatgtgtttacagtttcttgtagggttctcaccaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtatacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacactcgatggcgagctattaggcaccacacccctgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacaccagg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagatcctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--taggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttccttgcaagtttggcaggaggcgttgcctccaatgggatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctgacagatgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagacccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtccctttatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---aatg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaatactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------ggtttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcttttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305676.1/1-7488 |Norovirus GII isolate 11298 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaatacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccattacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctttgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacgctcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgattcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactggcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaaaatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacgaattgcagctgcccgttccctggtacaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgctgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggtcgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccggctaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcgcactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagcagcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggaccctgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaatggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggaatt +ggttcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccggcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------ttgttc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305677.1/1-7464 |Norovirus GII isolate 11389 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +---------------taataatgccaccccttctaacaaagaagaggt------tggtgcattatccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaaacaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgacg----------caaagtcagaaactataattgggttgccagacttaacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccactactccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---actacttggtctcccctgacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttacaacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaagtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaagacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaagaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +tggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcaggcctggcattggaaagacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactgcaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgccccttgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagggacttccctggccagcctgatatgtggaaagaccactttaagccagacttctcccacatcaagctga +ccctagccccccagggggggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggcctcgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaactg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaatg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattatatcagctgtttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttttgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaggaaaggaacggaaagtattccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttaatcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaagcaaatccaagttcacaagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccgattctgggccctggcaaggcgcctaaactcagcacaaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacttaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagcccccat +cacgctaggaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgt +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgataaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaactcaacaaaggagcattctttctgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgtcggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagattgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgacaaaactgaaggtcccctagtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactcg +atcctgaggcagctgtactggacaagggggcctaaccacgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagttcacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgctagctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaataacttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaacaattc +tggtgatgatgtgtttacagtttcttgtagggttctcaccaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtatacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacactcgatggcgagctattaggcaccacacccctgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacaccagg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagatcctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--taggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgttatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttccttgcaaatttggcaggaggcgttgcctccaatgggatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctgacagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagacccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtccctttatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---aatg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaatactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------ggtttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcttttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305678.1/1-7423 |Norovirus GII isolate 11470 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---tgaagaagaagaaccagtcatt +aggtatgggg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcataaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggctttttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaactttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagcactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaatgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggccctcaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcagc +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggacttcgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +aggtcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagtccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagacgtaggggacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggatcctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaattccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatctacct +agtgcctccctctgtagagtctaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcactttggatggagagcttcagggcaccacccagctgctgtcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaaaattcaccccaaaaattgggtcaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcagtcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtgcctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaactgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacagcctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---aaggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcctcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305679.1/1-7494 |Norovirus GII isolate 11632-c1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtatatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgagcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcatcggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtacagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgaactgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +tcctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactcttttctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ca---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacccttaccatctat-----------atc +tagttcct-----------ctagtgtatacagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305680.1/1-7492 |Norovirus GII isolate 11632-c2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtctgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtacaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccgatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggggcgctccaaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagggttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacagcatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305681.1/1-7494 |Norovirus GII isolate 11704-c1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtatatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgagcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcatcggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtacagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgaactgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +tcctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactcttttctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ca---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacccttaccatctat-----------atc +tagttcct-----------ctagtgtatacagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305682.1/1-7440 |Norovirus GII isolate 11704-c2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------cttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtacacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcgggaagatgct +atcgtctgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtacaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccgatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagggttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgactt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ttc--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305683.1/1-7494 |Norovirus GII isolate 11908 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagagat------cggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcccaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------cgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgttcccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggccgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +tgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaaaccagacttttctcacatcaagctaa +ctttagccccccaaggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggtactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgctagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggccctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatacccctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggggctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactctatgaaaacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacttttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305684.1/1-7494 |Norovirus GII isolate 11909 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagagat------cggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcccaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------cgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgttcccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggccgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +tgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaaaccagacttttctcacatcaagctaa +ctttagccccccaaggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagacaacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggtactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatacccctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggggctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactctatgaaaacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacttttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305685.1/1-7494 |Norovirus GII isolate 12084 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttccg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305686.1/1-7494 |Norovirus GII isolate 12092 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305687.1/1-7494 |Norovirus GII isolate 12094 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305688.1/1-7494 |Norovirus GII isolate 12095 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtaccaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305689.1/1-7494 |Norovirus GII isolate 12097 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305690.1/1-7494 |Norovirus GII isolate 12115 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccttacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgagttacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggcacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggagagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggtacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaggc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacctggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ca---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaag +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtacatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305691.1/1-7494 |Norovirus GII isolate 12116 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttgatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccctgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaacggtaacactccgcacggtaagggtaccatgcgttccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataactttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccaaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ttacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305692.1/1-7494 |Norovirus GII isolate 12135 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccttacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgagttacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtgaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggcacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggagagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggtacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtgggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaggc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacctggatggatcacccatagatccaacagatgacatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaag +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtacatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305693.1/1-7494 |Norovirus GII isolate 12146 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +acctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccttacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgagttacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgccgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggtagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggcacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggagagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggtacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcaccttttt +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaggc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacctggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ca---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaag +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaggctgctccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggcacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctgt-----------atc +tagttctt-----------ctagtgtacatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305694.1/1-7494 |Norovirus GII isolate 12247 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggtaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgctataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgcatttccagaaccaccggcttcttcaaaccctatcagtcctggaacaggaagcccct +cccaaccgtcgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcccgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttccccaagaaggaagagaaagctgagatggaaaccttaagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacttagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagccaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaactcacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgcccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattacgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaggaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccgcacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgatctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttt +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaaaggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagttccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacagatccaagttcacaagtctggggagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctgacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctataaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcctacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aagccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgcgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcagaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcgcctagtcagcttgatgttggtgatttt +atcgtctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcattcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggttcccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggcgaggcttcactgcatggcccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcagttgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggccaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtccctcctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgctgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccagcccca +aaacggcaggtgcacgactgacggtgagctgcttggcaccaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatggatcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccac------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacgagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcaagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305695.1/1-7519 |Norovirus GII isolate C22 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaaaaccagcacaaacagt +gaaattcac----aatcaagatgcaaaccctacatcaaac------------------ctctttgccaacat +gactgttggcttgaagaggg----ccctgggggcgaggccaaaacagtccgctcccagggtctcctccccca +acagggagggaaagctcgataccactcccagagccccctctcccaacaagggaggaaa--aatcaacatccc +cccaataccac--------------------ccccaccgcccaacgg------tgaggacatagtcatcaaa +tacaccaaac----------aaga---tgatgtagttgaaggggtacccaccgtcgccacggtggacgttcc +tcttacacacaacaccgcctacagtgttccccccttggaccagagggaaaaggttgatgcgaaggaacccct +gacaggttcgatacttgaaatgtgggatggggaaatctaccattatgggctatatgtggagaagggcttggt +ccttggtgtgcataaacccccagccgccataagctttgcacgcatagaactcactcccctttctctatactg +gagggtagtctataccccac---cttacctaatagccccagaaaccctcaggaaactccatggggagtcgtt +tccatacacagcctttgacaataactgctattccttctgctgttgggtcctggatctgaacgattcttggct +caa---taggaagtttgtgtcaaggaccacgggtttctacaggccctaccaagagtggaacagaaaacccct +accaactatggatgagggaaagcttaagaaggtggccaatgtgctcctatgtggcctctctgggctctttac +taggcccatcaaggacctcataggaaaattgaggccgctgaacatactcaacatcatcaccaattgtgattg +gaccttccccggagttgtggaggctctcatactacttgcagaactcttt---ggagtcttttggacaccacc +agacatttccacctttatagcatcactgctgggtgattatgaaatgcaaggccctgaggatatcgcggttga +ggtcgtgccggtgatcctcggtggcataggcatggtgcttggattcaccaaagaaaggatcggccgactgtt +gagctctgccgcgtcttcgctcagggcatgcagggagattggtaactacgggatagaagtggtgaaactggt +gatgaagtggtttttccccaccaaggatgagacaaacgagatggatatggtgagggcgatagaggatgctgt +gctcgattttgaagccatacagaacaatcatatgacagcattactcaaagacaaaaacagtctggcaacctt +cctcagggagttagatatggaagaggaaaaggcgcggaagctgtcaacgaaatctgcgtccccagatattat +tggcaccataaatgcccttctagccaggattgccgccgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggtcgacccgggataggaaaaacacacttggctcg +tgacctggccaagaagatggcagcgaccctctcaggtgatcagagggtggggctcgtaccgaggaatggtgt +cgaccattgggatgcatataaaggagagaggattgtgctttgggacgactacggcatgagcaaccctgtgac +cgacgcactgcggctccaggagttggccgacacatgccccttgacactcaattgtgatagaatagaaaacaa +ggggaaagtgtttgacagtgacaccataatcatcaccaccaatctagccaaccctgctcctctagactatgt +taattttgaagcttg-ctcccgccgtatcgatttccttgtctacgcagactccccttcggttgacaaagcga +agagagacttccctggtcaaccagacatgtggaaagatgccttcaaatcagacttttcacatataaagcttc +agttggcgccacaagggggctttgataagaacggaaacaccccccacgggaaaggtgtcatgaaaacgctga +ccacacactcccttattgcccgcgccacgggcctcctgcacgagagactggatgagttcgacctgcagggac +ctgagttgcctgtgtacaactttgaccacaacagggtggctgctttcaggagacttgcagctgacaacaagt +atggccttatggaaaccatgaaagtgggcaacaaactgaagggtgtcaagaatctggaacaactcaaggatg +ctctaaaggacataagtatcagaccttgcaggatagtctacaactcgatggcttacgacctcgactcgaacg +ggtcagggagagtcaacgtcaaaaaggctgtagaccacaaggtccaaaccaacaacgaactcaactccgcgc +tcaacaatctgcgtggcgccagagtgagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaaggatgacacggagactga------acatcagcagtatttggg +ccaggccaga------------aaaaca--------aatggaggccgctgaggaacccccagccccccca-- +--------actgagg---actggactataataccagcaaatgcagcccaggaaggtaagaagggtaagaaca +agagtggtagaggcaagaaacacaccgccttctccagcaaaggcctcagtgatgaagagtatgatgagtaca +aaagaatcagagaagagagacagggaaaatactctatagaagagtaccttcaggacagggaccggtac---t +atgaagaactagccatagccaaagcaacagaagagaacttctgtgaggaggaagaaataaaaattagacaga +gggtcttccgcccgaccaggaaacagcgtaaggaagagagagcgactctgggcctggttacgggcagtgaaa +taaggaagaggaacccagatgacttcaagccaaagggaaaactgtgggctgatgatgaccgcagtgtaaact +acaatgagaaaatagactttgaagcgccccccagcctctggtcccgaatagtgaactttggatcaggttggg +gcttctgggtgtctt-ccaatttgttcatcacatcaacacatgtcatccccccaaacatgaccgaggctttt +ggtgtaccaataggtcaaatacaagtgcacaggagtggggagttctgcaaaatgaggttccctaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagcccccgagggaacagtggtgaccattctgatcaag +agaacaactggtgaactcatgccactggcagcccggatgggcactcacgccaccatgaaaatacaggggaag +atgcttggaggccaaatgggcatgcttctcacagggtccaatgccaagaacatggatcttggcaccatcccc +ggggactgtggctgtccttatgtgtacaagagaggcaatgattgggtggtcataggggtgcacaccgcagct +gccagaggcggcaacacggtgatttgcgccacccagggaccagatggtgaggccacgcttgaggggggagac +aatcacgggacttactgtgctgcaccaatacttggaccagggagtgcaccaaagctcagcaccaagacgaag +ttctggaggtcatccaacgccccactcccacctggtacttatgaacccgcctacctaggcggaaaggaccca +agggtcaagggagggccatcactgcagcaagtcatgagggaccaactcaagcccttcaccgccccccgaggg +aagccaccacgaccggcgatcctggaggctgctaaagagaccatctgcaatgtgcttgaacaaatcattgac +ccacccctaaaatggtcttacgcccaagcctgtgcctcattggataagacaacatcaagtggccaccctcat +catatgaaaaagaatgacaactggaacggggagtcctttactggcgtgctagctgaccaggcctccaaggca +aacctcatgtatgaacaggggaaacacatgcagcctgtgtacactgctgccctcaaggatgagctcgttaag +accagcaaaatttatgagagcattaagaaaaggctcctatggggctcagatctgggcacaatggttcgctgt +gctagagcttttggtggtcttatggatgagatgaaagcaaattgtgtgaacttaccaattagagttggcatg +aacatgaacgaggatgggcccattatttttgaaaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggactcaacccaacagaggcacatcttgggggctgcccttgaaataatgg-ttagattctcag +ctgaacctgaatt-ggcacaaattgtgtctgaggacctcttagcccccagcgtggtggacgttggtgacttt +aaaattgccataaatgagggtttgccctctggggtgccgtgcacatcacaatggaactcaatctctcattgg +ctaataacattatgtgccatatcagaagtctcagggttgtcgccagatgtggtgcaaacaaactcctgtttc +tctttctacggggatgatgagatagtcagcactgacatcaagttagatcccatgaaactaaccaacaagttg +aaggagtacgggttgattccaacaagaccagacaagacagaggggccactcataattaaagaaaaccttgag +ggtttgactttcctgaggagggacgtgtgccgggacccagctggttggtacggaaaacttgatcaatcctca +atcatgagacaattgttctggaccaagggacccaatcatgaagaccccaatgaaacaatgattccacactct +cagaggcccatacaactaatgtcactgctaggggaggcagcactgcatggaccaactttctacaagaaagtc +agcaaattggttatcactgagctcaaagagggtgggatggatttctacgtgccaagacaggaacctatgttc +aggtggatgagattctctgatctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgccgccggcctcgtgccagaaagtagtaatga +ggcaatggctctggaacccgtggtgggggcatctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctcgaaactcccctgg +agaggtattggtcaatttggagctaggtccagaactgaacccttatctgggacacttagctaggatgtacaa +tggttatgcgggtggtatggaagtgcaagtgttgctcgcagggaacgcgttcactgc---tggcaagatcat +ctttgctgccgtgccaccttactttccagtggaaaatcttagcccttctcaaataacaatgttcccacatgt +gattattgatgttagaaccttggaacctgtattactcccaatgcctgatgttagaagtaccttgttccattt +taatcaaaaggatgag---cctaagatgagacttgttgctatgctttatacccctcttcgttctaatggttc +tggtgacgatgttttcaccgtctcgtgtaggatccttactaggccctcccctgaatttgatttcacatattt +agtaccaccaacagtagaatcaaaaaccaaaccattcacactacctgtactaacactgggagaattgtctaa +ctctaga---tttcccctctctattgatgaaatggttaccagccccaatgagtccatagttgtccagccaca +gaatggtagggttacgctggatggggagctgttgggcacaactcaattacaagcatgcaacatttgctctat +aaggg-----------------------------------------ggaaggtaacag-------------- +------------ggcaggttcc--------------------------------------------ta---- +----atgaac-------------------------------------aacatatg----------------- +----------tggaacctagagatcacaaacctaaatgggacacaatttgaccccacagatgatgtcccagc +cccccttggtgtgcccgactttgcaggtgaggtttttggtgtactcagccaga---gaaatagagg---tga +gagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgacaagtacacccccaaactgggcttagtgcaaattggaa---------cttggaacac +caatgatgt---tga---aaatcagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggttgcca---atggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctaaca------ctaaacatgaatttagcccctgctgtggctccgctctttcctggag +agcgtctccttttcttccgctcttatgttccat------taaaaggtggatt------tggta--------- +--accctgctatagattgtctggtgcctcaagagtgggttcaacacttctatcaggagtctgccccctctct +gggggatgtggccttggtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +gggtggattcctgactgtgtcaagcactagcacagggcctgttgtggtgccagccaatggctatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +atttc---------agtaatggcaggagcttttatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcaacaaaattctttcaatcatgataaagaaatgttaagt +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctggctgctgga +ggtttctccccaactgatgcagccagaggagctgttaacgcacccatgacccaagcactagattggaatggc +actaggtactgggcccctggctcag------------tgaagaccaccagctactctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgaattcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctccgtgtcttct--------- +----------ggtaga-------actaattt------gacaaattccactcaatcaact---------gttg +ttagtgcttcctcagtgc--------------------------------cac------------------c +ttctaggggcccctctgctccttctactctgtcaagggccacagccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---agggtgcccttcaaacagcatttgtcacccccccctctagccg +ggcatct---agta------------------------------atggaa---cagtctcaactgtgccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgctt +accttcgtaagaagggggagtcaca--------agcttag--t-----------gaaaagataattaa---- +-----------tgat------------------------------------taataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305696.1/1-7520 |Norovirus GII isolate C127 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggaaacaccacaa +aga---------------------cccccacgaccgcccactccggagttgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaacgg------ggaggacgaaccagtgatt +tcttacaacg----------ccaa---gagtggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +tactggaacaatcctggagatgtgggatggggagatctaccattacggcttgtatgtggatcgaggcctggt +gctcggcgtacacaaaccgccagcagctattagcctcgctaaggttgaactgacaccactctctttgttttg +gagacctgtctacacccccc---agtacctcatctccccagacacccttaggagattacatggtgaatcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgctgggttttggacctgaacgactcatggct +gag---taggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcctct +ccccaccatggatgattctaaattaaagaaagtggccaacatattcctgtgtgctttgtcttcactgttcac +cagacctatcaaggacataataggaaagctaagacctcttaacattctcaatattttagcttcatgtgactg +gacctttgcaggcatagtggagtctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactatgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtagtaatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttgaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaaacaatcatttgaccactctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgctctcctggcgaggatcgcggctgcccgttccctggtacaccgagcaaaagaagaact +ttccagcaggccaaggcctgttgtcgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaaaatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggatgcgtacaagggagaaagggtcgtcctttgggatgactacggtatgagtaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactaaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcattgacttcctcgtgtacgccgaagctcctgatgttgagaaagcga +agcgcgacttcccaggccaacctgacatgtggaagaatgctttcagccctgacttctcccacataaagctga +tgctggccccgcagggtggctttgacaagaatggcaataccccacatgggaagggtgttatgaagaccctca +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcaggcagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaggtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtagtgtgagggttgacaaggtccagagtgccactgtgcaaaccaacaacgaactagccggcgccc +tgcatcatctcaggtgcgccaggatcagatactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaagccacaactggaggatacggaaga--------agccactggtaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtctcatccgacgacatcaaggttgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggtaaatactctatagaggagtacctccaagacagagacaagtat---t +atgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaagaagaggccaagattcgacaga +gaatctttaggccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggttctgaga +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaaacaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacattactcatcaag +agaccaactggtgagctcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgt +actgttggaggtcaaatgggtatgctcctgacagggtccaatgccaaaagtatggacctgggcaccacacct +ggcgactgtggttgtccctacatttacaagagagggaacgactacgtggtcatcggggttcacacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagcgaaggtgaggccacacttgagggcggtgac +aacaatggtacttactgtggcgccccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggtacctatgaaccagcctacctcggtggtaaggacccc +agaatcaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggagccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccattattaacgtccttgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgactccagtttacacaggtgccctcaaggatgagttggttaaa +acagacaagatatatggcaagattaagaagagactactttggggatcggacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgaactcaaggcccactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaggcactccaggtataggtatcactatgatgcagactat +t-ccagatgggactcaacacaacaaagagctatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccgcactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggatgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtgccttgcacttcacaatggaactctattgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacatcgttcaagccaattctctcttc +tctttctatggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacggcaaagctg +aaggaatacggactgaagccaacccgccctgacaagactgaaggacccctaatcatttctgaggatctaaat +ggtttgaccttcttgcgaaggactgtaacccgtgatccagctggttggtttggtaaattggaacaaagttca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagaaccgatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgctgccattgcagcacctgtagcaggccagcaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatttgaacccctatctctctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggcctaagccccagtcaggttactatgttcccccatat +aattgtggatgttaggcaattggaacctgtattgatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tccaccctcaaattgatagcaatgttgtacacaccactcagagctaacaatgc +cggggatgatgtttttacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccatccctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaacatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggac------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgacccaacagaagaaatcccagc +tcccctggggacaccagactttgtaggaaagatccaaggtttgctcacccaaa------------------- +-----ct-----acaagagcggacggctcgacc--------cgc-----------gcccacaaggccacagt +gagcaccgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgatacgga +caatgattt---ccaaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgacca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccgccttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaggcagccccagcaca +atccgatgtggccctgctgaggtttgtgaacccagacacaggtagggttctgtttgagtgcaaactccataa +gtcaggctatatcacagtggctcatactggcccatatgatttggttatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttctggactt +ggttctctaatcagtgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaatagaaaattg +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccagcatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcagcaagaattgatgaaagttaaacaggcggtgctcctagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtattgggctcctgatgccaggatcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggagcatt---------------------------------g +cctggga----------------gaaccaatcctagggttcc------------------------------ +------------------------------tgcatctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attccaatca------aactgcttcaac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcaagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacaaaaatttgtcgcctttcatga---agggggctctcaacacatcatttgtgacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaatacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305697.1/1-7520 |Norovirus GII isolate C140 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggaaacaccacaa +aga---------------------cccccgcgaccgcccactccggagttgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaacgg------ggaggacgaaccagtgatt +tcttacaacg----------ccaa---gagtggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatatagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +tactggaacaatcctggagatgtgggatggggagatctaccattacggcttgtatgtggatcgaggcctggt +gctcggcgtacacaaaccgccagcagctattagcctcgctaaggttgaactgacaccactctctttgttttg +gagacctgtctacacccccc---agtacctcatctccccagacacccttaggagattacatggtgaatcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgctgggttttggacctaaacgactcatggct +gag---taggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcctct +ccccaccatggatgattctaaattaaagaaagtggccaacatattcctgtgtgctttgtcttcactgttcac +cagacctatcaaggacataataggaaagctaagacctcttaacattctcaatattttagcttcatgtgactg +gacctttgcaggcatagtggagtctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactatgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtagtaatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttgaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaatcaatcatttgaccactctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgctctcctggcgaggatcgcggctgcccgttccctggtacaccgagcaaaagaagaact +ttccagcaggccaaggcctgttgtcgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaaaatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggatgcgtacaagggagaaagggtcgtcctttgggatgactacggtatgagtaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactaaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcattgacttcctcgtgtacgccgaagctcctgatgttgagaaagcga +agcgcgacttcccaggccaacctgacatgtggaagaatgctttcagccctgacttctcccacataaagctga +tgctggccccgcagggtggctttgacaagaatggcaataccccacatgggaagggtgttatgaagaccctca +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcaggcagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaggtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtggtgtgagggttgacaaggtccagagtgccactgtgcaaaccaacaacgaactagccggtgccc +tgcatcatctcaggtgcgccaggatcagatactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaagccacaactggaggatacggaaga--------agccgctggtaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtctcatccgacgacatcaaggttgagggcgagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggtaaatactctatagaggagtacctccaagacagagacaagtat---t +atgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaagaagaggccaagattcgacaga +gaatctttaggccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggttctgaga +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcatagcatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaaacaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggactgacgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacattactcatcaag +agaccaactggtgagctcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgt +actgttggaggtcaaatgggtatgctcctgacagggtccaatgccaaaagtatggacctgggcaccacacct +ggcgactgtggttgtccctacatttacaagagagggaacgactacgtggtcatcggggttcacacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagcgaaggtgaggccacacttgagggcggtgac +aacaatggtacttactgtggcgccccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agaatcaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggagccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccattattaacgtccttgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgactccagtttacacaggtgccctcaaggatgagttggttaaa +acagacaagatatatggcaagattaagaagagactactttggggatcggacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgaactcaaggcccactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaggcactccaggtataggtaccactatgatgcagactat +t-ccagatgggactcaacacaacaaagagttatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccgcactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggatgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtgccttgcacttcacaatggaactctattgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacatcgttcaagccaattctctcttc +tctttctatggtgatgatgaaattgtgagtacagatataaaattggacccagaaaaactgacggcaaagctg +aaggaatacggactgaagccaacccgccctgacaagactgaaggacccctaatcatttctgaggatctaaat +ggtttgaccttcttgcgaaggactgtaacccgtgatccagctggttggtttggtaaattggaacaaagttca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagaaccgatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgctgccattgcagcacctgtagcaggccagcaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatttgaacccctatctctctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggcctaagccccagtcaggttactatgttcccccatat +aattgtggatgttaggcaattggaacctgtattgatccccctacctgatgttaggaataatttctatcacta +taatcaagcacatgat---tccaccctcaaattgatagcaatgttgtacacaccactcagagctaacaatgc +cggggatgatgtttttacagtttcttgtcgagtcctcacgagaccatcccctgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaacatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggac------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgacccaacagaagaaatcccagc +tcccctggggacaccagactttgtaggaaagatccaaggtttgctcacccaaa------------------- +-----ct-----acaagagcggacggctcgacc--------cgc-----------gcccacaaggccacagt +gagcaccgggagtgtccacttcaccccaaagctgggtagtgttcaattcacca---------ccgatacgaa +caatgattt---cgaaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgacca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccgccttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaggcagccccagcaca +atccgatgtggccctgctgaggtttgtgaacccagacacaggtagggttctgtttgagtgcaaactccataa +gtcaggctatatcacagtggctcatactggcccatatgatttggtcatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttctggactt +ggttctctaatcagtgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaatagaaaattg +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccagcatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcagcaagaattgatgaaagttaaacaggcagtgctcctagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtattgggctcctgatgccaggatcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggagcatt---------------------------------g +cctggga----------------gaaccaatcctagggttcc------------------------------ +------------------------------tgcatctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attccaatca------aactgcttcaac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcaagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacaaaaatttgtcgcctttcatga---agggggctctcaacacatcatttgtgacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaatacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305698.1/1-7494 |Norovirus GII isolate CMH-047-07 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgagcatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccctatatctctctattg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcaatcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctgcacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaattatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgctgt +cctagatatggaagccatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgtaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgatatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggccttgtccatgagaggaaagatgagttccaactccaaggaa +gcgacctccaaacatacaattttgacaccaacagagtctccgcatttagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaagcttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaatg +gtaaaggctcagtttctgttgacaaaattgagaacaatgcatcccagaccgcgaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---ggtgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttccatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggtgcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccgcctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggataaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattcc +cagcgagccacacagcttatggctcttctcggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgagtgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagatataagaaatgttttctaccacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccaaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgatatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtggcttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaagaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305699.1/1-7522 |Norovirus GII isolate CMH-104-05 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggcccggcctaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aagagaatacc +ccc-----------------------------tcctccacctaatggc------gaagaagaaccagccatt +aggtttgagg----------ttaa---gagtggaatctctggtctgcctgagctcacgacagttccccaact +ggatgtgaccaatacggcattcagtgtcccaccgctgagcttgagagaaaacaaggaggccaaggaaccgct +gactggggcaatattagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagtatggcaaaggtggaaatgacgccgctgtcattatactg +gcgtgtggtgtacacccccc---aatacctcatttcccctgacactcttaagaggcttaacggggaagcatt +cccttacactgcctttgacaacaactgttatgccttttgttgctgggtgttagaccttaatgactcatggct +cag---cagaaggatggtgcaaagaacaacaggcttcttcagaccctaccaagagtggaacagaaaacccct +acccactatggatgactcaaagattaagaaggtggcaaacattttcttatgttcattgtccacactgttcac +cagacctataaaagacatcatagggaaaatcaaaccactaaacattttgaacattctggcaacgtgtgactg +gacgttcgccggaatcgtagagtctctaatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttacttggcgaatacgagctgcaagggcccgaagacatcgtcgttga +gctcgtacctgtagtgatgggagggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +atcctcagcagcatcaacgctcagggcttgcaaagaccttggtgcttatggtttagagatacttaaattggt +catgaaatggtttttcccaaagaaagaagaggccagtgaactagccatggtgagggcaatagaggatgctgt +actggatcttgaagcgatagaaaacaaccacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaagacactggacctagaggaagaaaaagccaggagattgtccacaaagtctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcagcggctagatcactagtccacagggccaaagaggagct +gtctagcaggatcaggccagttgttgttatgatttctggcaagccagggataggcaagactcacctagccag +ggaggtggcgaaaaaggtggcatccactctcacgggagatcaaagagtcggactcataccgagaaacggtgt +agaccattgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagtaaccccatcca +tgatgctctgcgcatacaggaattggccgacacatgtcccctcaccttaaattgtgatagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagctccccttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtatacgccgaagcaccagaagtggaaaaggcaa +aacgagacttccctggtcagccagatatgtggaaggacgccttcaaagcggacttttcgcatatcaagttac +aacttgcgcctcagggcggttttgacaagaacggcaacaccccacatggtaaaggagtgatgaagaccctca +ccactggttctctgattgcccgtgcgtcaggtttactgcatgagaggatggatgaatttgaactccagggcc +ccacaatcaccacttttaatttcgaccgaaacagaatcaccgcctttagacagttggctgcagaaaataagt +atgggttggtggacaccatgagagttggcaaccaactgaaaggggtgaaaaccatggaagaactcaagcaag +caatcaagaatgtatccatcaagaggtgccagattatctataatggctccacgttcgaccttgagtctgacg +gcaagggcaaggttttagtggaaaaggtcaaaaacacctccgttcagaccaacaacgagctggccggggccc +tgcatcacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaagcagtctactccatcctac +aaattgccggcgctgcgtttgtcaccacacgtattgcgcgccgtatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------gccagagactaaagaagaggcccccaagttagaa-- +-gat-------gatg---agttcattatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaata +agactggccgtggcaagaaacacactgcattctcgagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgcgaggaagaagaaattaaaatccgccaga +ggatcttccgccctaccagaaaacaaaggaaggaagaaagggccacgctaggactagtgactggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagttgtgggccgacgacaacagaagtgttgact +acaatgaaaagttggactttgaggcccccccaagcatatggtccaggattgtgagctttggttccggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgagttttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagagggtgcgccagagggcactgtggcaaccgtactaatcaaa +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcgaccatgagaattcagggtcgc +atggttggcgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatttgggaacaactccc +ggtgactgtggctgcccgtacatctacaaaaggggtaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaatactgtcatctgcgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgcggggcacccattctgggccctggaggagcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacgtatgagcctgcctatcttggtggtcgtgacccg +cgtgtgaagggcggaccctctttgcagcaagtcatgagagatcagttgaagcccttcactgagcccaggggt +aaacctccaagacctagtgtgctggaggcagctaaacaaaccatcatcaacgtccttgagcaaactctggat +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccat +cacacccgaaagaatgaattctggaatggtgagacctttattggcaagttggcagaccaagcatcaaaggca +aacctgatgtatgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtgaaa +actgacaaaatctatgggaagatcaagaagagactgctttggggctctgacttgtccaccatggtccgatgt +gctagggcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaagatggtccaataatatttgagaagcattccagatataagtaccattatgatgcagactac +t-cccgctgggattcaacacaacaaagggctgttctagcagcggctttggaaataatgg-tcagattctctg +cagaaccacaact-ggcacaaacagtcgctgaagacctgctggcccctagtgtggtagatgtaggagacttc +aaaatttcaataaatgaggggcttccttctggtgtaccatgcacttcccagtggaactccatcacacattgg +ctgttaactctctgtgctttgtctgaagtcaccaacctgtcccctgacatcgtgcaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agggaatatggtctgaaaccaacccgcccagataaaactgagggaccactaattatcagcgaggatttggac +ggactcaccttcctccggagaacagtttcccgtgacccagctggctggtttggaaagttagatcaaagctca +atactaaggcagatgtactggaccagaggaccaaaccatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagcttatggcactgcttggtgaggcttccctccatggaccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccgaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcacttgaaccagttgcgggagcttcaattgctgcccctttaactggtcaaaataatgtaataga +cccctggattagattaaattttgtacaagcccccaatggtgagtttacggtttccccccgaaactcgcctgg +tgaaattttgctaaatttggagttagggcctgaattgaatccatacttagcccatttagcaagaatgtataa +tggttatgcaggtggggttgaggtgcaggtactgctggctggaaatgcgtttacagc---aggcaaactggt +atttgcagcaatcccccctcattttccagtagataatttgagccctggtcagatcactatgttcccccatgt +gattattgatgttagaacacttgagccagtcttattaccattacctgatgttaggaataatttctttcatta +taatcagcagagtgat---cagcgcatgaggcttattgctatgctttataccccccttagatctaatggttc +aggtgatgatgtcttcactgtttcatgtagggtcctaaccaggccatcccctgactttgattttaattattt +ggttcctccaacagttgaatctaaaactaaacccttctcagtcccagtgctgacccttaatgaactgaccaa +ctctcga---tttcctgtcccgattgatgccatgtacaccagccctaatgattcaattgtggtccaacccca +aaatggaagggcaaccatagacggtgagttgcttggcaccactcagctcatccccagtggtatctgctcatt +tagag-----------------------------------------ggaaaatcacaacac----------- +-----------acttgtc------------------------------------------------ag---- +-------atgaca----------------------------------ggcac-------------------- +-------ttgtggaacatccaagtctccaatttgaatggcactccgtttgacccaacagacgacgtgcccgc +accactgggtatgccagacttctctggacaaatatttggggtagttagccaaa---gggatacag------- +----------------gcaccaaccccgcaaac--------aga-----------gctcatgacgctgttct +tgcaacctacagcgccaaatatactcccaagctcggttcagtccaaattggaa---------catgggacac +cgaggattt---acttgaaagacagcctgtaa---------------------------aattcacgcccgt +tggtctcaatgaaatt---------gggcaggacaagcat---------tttgaccaatgggtgttgccaaa +ttattctggtgcc-ttagga------ctcaacatgcacctggctcctgctgtgtccccactctttcctggag +agagattattgttctttagatcatatatacct------ctaaagggtggcca------tgggg--------- +--atccgttcattgattgtctagtgccacaagaatggatacaacacttttatcaagaatcagccccagcgca +atcctcggtggctctactgaggtatgtgaatccagacacaggtcgcaccctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagtacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgactcttgggttaaccaattctattcactagcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcaggacttgctggtgacattgtcactaatggcatt +ggttcgcttgtgaacgctgg---agccaatgctataaaccaaaaagttgattttgaaaataacaaacaacta +caacagg---------------------------------cttcttttaatcatgacaaagagatgctgcaa +gcccaaatccaagccaccaaacagctacaggctgacataatttcaatcagacaaggggttttgtccgcgggc +ggcttttcccctactgatgctgcaaggggtgcagtcaacgcaccaatgacccaagtgttggactggaatggg +actagacattgggcccctggagcctcaagaactaccagtttctctggtgggttcaccaactcc--------- +ac---------------------ccgtgccagaacagttgagccacctaaaagttccccctctgttcaaaat +accttga----------------cttctgcttctagat--------------ctag---------------- +------------------------------ctctactgtctcatcttcttcc------------------ac +ccgttcga-----------ctgtg------------gttactagttcctctactgccc-------------- +----catctgttagat-----cttctgtaac------tagaaatttacc-----------ac--------gc +-------------------agtgcttctcaatctgtttctt---------ctg------------------t +ttcttc---------------------------------------tcgcactggtgattgggtgcaaaatca +aaatagaatgctggagccatacctga---gggggtcgttgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---agta------------------------------atggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------tcaacacccgcagacagccgctcttcgctc +acctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagaatt-------- +---a-g-att-ttct-----tt------------ttctttc----------tt-------------ttcttt +t-gttgaaaatc-ttat---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305700.1/1-7494 |Norovirus GII isolate CMH-118-07 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagagcacc-------------agggcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacagt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcatagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagaactcacccccatatctctctactg +gaggcccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---tagaagatgtatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcacttggctcactgttctc +aaagccaattaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagttatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgccctcgacattctcaaattggt +catgaagtggtttttccccaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagctagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaacgccatactagctaggattgctgctgccagatcccttctacataaagccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttgacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +aaagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaggaggaagaggccaaaataagacaaa +gaatttttcgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccagaagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggtaacactgtcatatgcgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgctccgattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggaaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccatggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagagactcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggccacacagcttatggcccttcttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttatcaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccctgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +cgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattggaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtctcttgccgcgttttaacacgcccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttctcagagtctcagagatgacaaa +ttcaagg---ttccccgttgtcttggaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccatgttatatggcgttgcaagtcaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaataatcacttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcatcaaccctgaaacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttctagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacgggccatgatagacatcaagcgggaggcattgaccgcaggt +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcctcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaactc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------tagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaatac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggta---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305701.1/1-7486 |Norovirus GII isolate CMH-145-05 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcaacc +ggatgaaaacaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccgct +acccggaacaatcctggaaatgtgggacggggagatctatcattacggcctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactctcaggagactgcatggagagacgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaaggctggaacaggaaacccct +ccccaccatggatgattccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcccgaagaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctgggattcaccaaagagaggatcggaaaaatgct +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaatcacatgactaccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacatcgaggaggagaaggccaggaaactttcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgctctcctagcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctctagcagaccaagacctgttgttgttatgatatcaggcaagccagggatagggaaaacccaccttgccag +agaactggccaagaaaatcgcagcttctctcacaggggaccagcgtgtggggctcattcctcgcaatggcgt +tgaccactgggatgcatacaagggagagagagtcgtcctatgggacgattatgggatgagtaaccccatcca +cgacgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgataggattgagaacaa +aggcaaggtctttgacagtgatgccataatcatcaccactaacctggccaatccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaatggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgatggacacaatgagaattggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcacaatcaagagttgtcagatagtgtatggtggctgtacttacaggcttgagtctaatg +gcaagggtgatgtgaaagttgacaaagttcagaacgccactgtgcagaccaacaatgaacttgccggcgccc +tacaccatcttaggtgtgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgccaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggatacagagga--------gaccgccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaaaaaca +agtctggtcgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaatggcaaatactccatagaggaataccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacgggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagttgtgggctgatgacgacaggagtgttgact +acaatgagagactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gtttctgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcaggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttggaagaaggtgcaccagaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaacaatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggatctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggcggtgac +aacaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaagacccc +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcactgaacccagggga +aaaccaccaaaaccaagtgtgttagaagctgccaagaagactattgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcgtgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgattgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaagcc +aacctgatgtacgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagttggtcaag +actgataaaatttatggcaagatcaaaaagaggcttctctggggctcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaggcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagaaacactccagatacaaataccactatgatgctgattac +t-cccgatgggactcaacacaacaaagagccgtgttggcagcggccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgatattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggatccagaaaagttgacagcaaaactc +aaggaatacgggttgaaaccgacccgccccgataagactgagggaccccttgttatctctgaagacctggat +ggcctaaccttcctgcggaggaccgtgacccgtgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttactgggtgaggctgcactccacggcccaacattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcctcaatagccgccccactcaccggtcaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggggagttcacggtttcgccccgtaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttacgcaggtggagttgaggtgcaagtgctactggctgggaacgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcactttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttccagatgttaggaataatttctttcatta +taatcaacaaaatgaa---ccaaggatgagacttgtggcaatgctttacactcctcttagatctaatggttc +tggtgatgatgtgtttactgtctcttgcagggtgcttacccgcccttcccctgattttgactttaactactt +ggtcccccctaccgttgaatctaaaactaaacccttcacactccccatcttgaccattggggagttaaccaa +ctctagg---ttccctgtgcccatagatcagatctacaccagtcccaatgagaatctggtggtgcaacccca +aaatgggagatgcgcgctagatggggagctgcagggcacgacccagcttctccctacggcgatttgctcatt +caggg-----------------------------------------gccggatcaatcagcatgtga----- +----gtggagataacca-------------------------------------------------tg---- +-----------------------------------------------tttggaac----------------- +----------------atgcaggtcaccaacatcaacgggaccccttttgacccaacagaggatgttccggc +tcccctaggcaccccagatttctctggtaagatctttggcatactaagccaga---gggaccatgaca---- +-------------------------acgcctgt--------agg-----------agccatgatgcagtaat +tgcaaccaactctgccaaatttactccaaaattgggcgctgtacaaattggca---------catgggaaac +agatgacgt---gcacatcaaccaacctacca---------------------------aattcactccag- +--------ttggcttg---tttgaagatgagg---------------gtttcaaccagtggacactccccaa +ctactctggagct-ttaaca------cttaacatggggttggccccccctgtggcccctaccttccctggtg +aacaaatccttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgactgtctcttgccccaagaatggatccaacatctttaccaagaatcagccccctcaca +atcagatgtggcattgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggtttcatcacagtggccaacactggcagcagaccgattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaacgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgctggtgacatagtcaccaatagcatt +ggctcacttgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaatcatgataaagagatgttgcaa +gctcaagtccaggccaccaaacagctgcaggctgaaatgattgcaattagacaaggggtgttgaccgcgggc +ggcttctcccctactgatgcagcaagaggtgcagttaatgcacctatgacccaggtcttagactggaacggg +accaggcattgggcccccggagccaccaaaactactgctttctccggtgggttcaccagtg----------- +-------------------------------cttccca---------------------------------t +gccagaa----------------ctgtcgacctaaccaag-------------------------------- +----------------a--agacatcagccacaccagcccctacgcctgtttctagac----------ctag +c---tcta-----------ctgcc------------tctacagtctccacccgctc---------------a +acattggttagcgggt-----cttctatttc------ttcctct---------------------------t +cagctag--------gagttcttctagtgtttcctctcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagcgagtgggtgcgcagcca +aaacaaggtgttggagccttacatga---gaggggcgttgcacacaacctttgtgacgcctccctctagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +aggggttttgga-ctcctggacacctgcgt------------ttaacacccgcaagcagccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatg--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaaat--------tcttt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305702.1/1-7488 |Norovirus GII isolate CMH-N005-11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatt-------agaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcagacagcc +ggatgagacaaactcagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggatggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccgctgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacgctcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtggtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaaggttggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactttccaccaaatccgcttctcctgatattgt +gggcacaatcaattcgcttctggcacggattgcagctgcccgttccttggtgcaccgggcaaaggaagagct +ttcaagtaggccaagacccgttgtcgttatgatatcaggaaagccagggatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcgtg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgtttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaagtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgccaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtagaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagagctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaagcaacgcaaggaggagagggcttcacttggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagctttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggctggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagaattcttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggcaccacacca +ggtgactgtgggtgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaagaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacgggagccctcaaggatgagttggtcaaa +accgataaaatatatggtaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgttgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttt +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagacccagaaaagttgacagctaaacta +aaagaatatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcgtttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaggtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctacaccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggttccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ctccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtgcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgtcccagc +tcctctaggtacaccagacttttctggcaagctctttggcgttctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttactccaaagttgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatagggttggccccccctgtggcccccacatttcctggtg +agcaaattcttttctttagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagtcattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcagg---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccagtggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcttctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ttagga-----gttcttccag------tatttcttc---------------------ccaat +ctgcttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtgcgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305703.1/1-7488 |Norovirus GII isolate CMH-N006-11-c1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaactcagcatttagtgtccccccactcaaccagagggaaaacagggatgccaaagaaccgct +gcctggcaccatattggaaatgtgggatggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccgctgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacgctcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtggtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagaccctggatcttgaagaggagaaagctaggaaactttccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttcaagtaggccaagacccgttgtcgttatgatatcaggaaagccagggatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcgtg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtaaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggtcgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagagctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaagcaacgcaaggaggagagggcttcacttggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaagactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagctttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggctggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagaattcttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacattgctcataaaa +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +gctgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatataaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatacgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacgggagccctcaaggatgagttagtcaaa +accgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcacactccccattagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctattttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaattactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttt +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagacccagaaaagttgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatggtgccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaggctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaggtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtacttactcgaccctctcctgattttgatttcaattattt +ggttccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtgcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacggaggatgtcccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttactccaaagttgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggtg +agcaaattcttttctttagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagtcattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggggctttcatagcaggtcttgctggtgatatagtcaccagtggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacagtaagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcggcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ttagga-----gttcttccag------tatttcttc---------------------ccaat +ctgcttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggaaccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgccggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305704.1/1-7478 |Norovirus GII isolate CMH-N006-11-c2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------------ttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggataccggacttgacaacagt---gcaaaa +tgagcatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccaccgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttcaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggcaacaaccacctcacgaccctcctcaaggacaaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagggatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagtgctcaaaaatgtcaaaaccttggaagatctgaagatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatctacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcatctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggttaaaccaaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtggctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatattccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaagaggggtacttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgatactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcctatctggggggtaaggatccc +agagtggaaaagggaccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcttccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaggaaaataaagaagagacttctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcagacaattatactggacaagggggcccaaccacgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtc +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggtgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaaaacacc---ccccggatgaggctcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctgcctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgccatagatatgctttatactgatcctaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgctgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgta----------------atcacccg----------------- +----------ttgcacgttcaggtcaagaacctggatggcacacagtatgatccaacagatgacatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---taccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggcgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagctattcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aattaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacga---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---acggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaa------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305705.1/1-7463 |Norovirus GII isolate CMH-N016-12 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgct------------accagc +a------ac----aacgacatcgcaaagtcttcaagtgatg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatt-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggatgacatagtggtg +tcctacagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +gggcgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatcttggagatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcagctattagccttgcgaaggttgaactaacgccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttatgccttctgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgactccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtctaccctcagagcttgtaaggaccttggagcatatggactggaaattctgaagttggt +tatgaagtggttcttcccgaagaaagacgagacaaatgaacttgcaatggtgagatccattgaggacgcagt +gctagacctcgaagcaattgaaaataaccacatgactaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggatcttgaggaggagaaagctaggagactctccaccaaatccgcttctcctgacattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaagacccaccttgccag +agatcttgcaaagaaagttgcggccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccactgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagcaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattgaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagatctgacttctcacacataaagttga +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcgggactcctccacgaaagactggacgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaaccgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctacggtggtctcacatattcacttgaatctgatg +gcaaaggtaatgtgaaggttgagaaggtgcaaagtccagctgtgcaaaccaacaatgagctaactggcgcat +tacaccatctgagatgcgctaggattagatattatgttaagtgtgtccaggaatctttgtactccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaagctcagttttgaagcccccccaagcatctggtcgagaatagtcaactttgggtcaggttggg +gcttctgggtctcac-caagtctctttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccgaagccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggcacccatgcaactatgaagatccaaggtcga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggagtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaactcaaggaagtgagggcgaggccgtacttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaggtgcacccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttaccttggaggcaaagacccc +agggtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccgtttacagaacccagaggt +aagccaccaaagcccagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggttacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaagatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttgttatggggttcagatctggcaaccatgatccgttgc +gcacgagcgttcggagggctgatggatgaactcaagacccactgtgttacactccctatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgaaaaacactctaggtacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagataatgg-taaaattttccc +cagaaccacacct-agctcagattgtcgcagaagacctcctatctcccagtgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacttcacaatggaactccattgctcattgg +ctcctcacgctctgtgcactatctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaactagatccagaaaggctaacagtcaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaaggacctctggtcatttctgaggacttagat +ggtctgaccttcttgcggagaactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaatcatgaggacccctctgaaacaatgataccacactcc +caacgacccatacagttgatgtccctactaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatatcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttccatagctgcccctctaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttaaatttggaattaggccctgaattaaatccattcctggcacacctttcaagaatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattacaatgttccctcatgt +aattattgatgttagaactttggaacctgtcctcttgcctttgccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggttc +tggtgatgatgtgttcacagtctcttgtagggtcctcactcgcccctctccagactttgattttaattattt +ggtccccccaactgtggaatctaaaaccaaaccattcaccctgccaatattgaccatcggagaactgtcaaa +ttctagg---ttcccagtaccaatagatgaattgtacaccagccctaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gatcaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaatgcaaatgggacttcctttgaccccactgaagatgtccctgc +accattgggcacgccggatttcctggcaaacatctacggagtcactagtcaga---ggaa------------ +-----tc------------ctgataacacttgc--------cgt-----------gcccatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggca---------cttgggaaga +aagtgatct---tgatcttaatcagcctacca---------------------------gatttacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctcccctcttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggagtcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtccctcctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcagggcttgccggtgacatagtcaccaatggcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtattgaccgcaggc +ggcttttcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccacgaaaacaactgctttctccggcgggttcacaagctct--------- +cc-------------caataccaggactattgatttgc---------------------------------c +taggaaa----------------acatcaaacacaccagccccc---------------------------- +------acgcctgtgtc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctagcccttcttcttcga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggaaccctacatga---ggggagcgttacaaactgcttacgtgacgcctccctctagtag +ggcctcc---agca------------------------------atggta---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggcttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ctattc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305706.1/1-7459 |Norovirus GII isolate CMH-N017-10 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgtccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattctaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtccaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcatag +gcagggatttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggatatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctat--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaact-------- +-atgcttt--------------------------------caaattccagctcttc---------------- +----------------------ttcccttgg------gactccttcgac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcggactgggttcgaagtca +g---aggaacctgagcccctacatgg---atggggctctgcagacagcctttgtcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctcaggaagaggggggagtcaca--------agtctag--t-----------gaaaagaatc-------- +-------att-tta----------------------at-a--------aa-ttct-------------ttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305707.1/1-7459 |Norovirus GII isolate CMH-N025-15 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------acgccaccccttctaataaagaagaggt------tggtgcattctccaacat +aaaagttggattcaagaaaa----tgctgggtgccgttcctaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagtcaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgttcctccattaagtgagagggaacacagaccagctaccgaaccact +tcctggtacaatattggaaatgtgggatggtgagttttaccattattctgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +tccctatacggccttcagtaacaactgttataacttttgctgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaacgcaatcctctgtgcactcggttcactgttctc +aaaaccaatcaaagacctgttaggtaaactcaagccattgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aacgtcttttggaccccccc +agatgtctctaattttgtagcctccctaataggtgattttgaattacaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttcttggtttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagccatagggaacaaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggattaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +gcatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccgcgcaacggcgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggcatggggagccccgttaa +ggacgctctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactacgt +aaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cacaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggagacaatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatctcaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgggtctcttccaacg +gtaaaggctcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgattccga-----aaagg +aagtgacacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggtaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +ttaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagcgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaattaagcaaatccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgatattgttgtcgcaggtgttcataccgcagca +gcacgaggaggtaacactgttatatgtgccacccaagggcaagacggggaagcagtccttgaggggaatgag +gaccttggcacctattgtggcgccccaattttgggccccggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttaccacctggcacatatgaacctgcttacctagggggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagatcagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagttttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaacgaccactggaatggggagtccttcaccggcccacttgcagatcaggcatcaaaggcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttagg +actgacaagatctacaaaaagataaagaagaggctcctgtgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgtagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttctagcacctagccagcttgacgttggcgatttt +gtcatctcggtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtatcaggtctctcaccagatgtcgtccaagctcattcttgtttt +tccttttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccactcggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcaattgctcgggacccagctggttggtttggaaagctggaccaagactca +atcctcaggcagctgtactggacaagggggcctaaccatgagaacccatacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgtagctccatctag---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaacaattttgtacaagctcctgcaggtgagttcacagtctcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacggc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattaggaataatttcttccatta +caatcagggaaatgac---ccaaaattgagattggtagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtcccagtggaaatgatgtacacagccaggaatgagaaccaagtagtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaataagaatga--- +------------acagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtacaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccatctggctccagcagtggcccccctgtttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctaccaagaagctgccacagctca +gtctgaagtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagttgcacaa +gcaaggctttataactgtggctcacaccggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gattc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctcccctacggatgccgcaaggggttctgtcggagcgccgatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcaagacaca---atcaactaccctctcagg-tacttcaag--------gg +tgggctc----c---ccacc-------------------tcagtcaaccctct---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacagcgtatgtaacgccaccgtccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaagcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcttttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305708.1/1-7520 |Norovirus GII isolate CMH-N033-18 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccgcaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatgcc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaagtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagaccttataggaagagttaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccgggatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggagaccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcgttagtccatagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagcctgacttttcacacatcaagctac +agcttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgatcgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaacgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tacaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaagctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaagagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactgggtcaaacgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccgaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +attttgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcgctgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagtgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgttaggaataatttttatcatta +caatcagtcaaatgac---tccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgtttttacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------taacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgatcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggcagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggtcatcccccccaacggttactttaggtt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +agttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaatagaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaattttaagg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatcct-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttcttctt-----c-tt-------------ttctt- +-------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305709.1/1-7463 |Norovirus GII isolate CMH-N093-13 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------aataatgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtgcccaagggtacc-------------aaagcaccc +agcagtgt----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgta +cagtttgatg----------caaagtcagaaactataattgggttgccagacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgttagcaacggcaaagc +tctgggggtccataaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccta---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctctgcgctctcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcctgatggcagagctcttt---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctcaggacctggctgtgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgccctcgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cttggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaagctgtccactaaatcatcttcaccggacatagt +cggcaccattaatgccatactggctaggatagctgctgccagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagacctggcattggaaagacccacatggcgag +acatttggccaagagcatcgccaacaccatgagcggtgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgattacggtatggggagccctgttaa +agacgccctaacactacaagagctggctgatacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgattatgt +gaatttcgaggcgtg-ttctaggagagttgacttcctggtttatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccaacctgacatgtggaaagaccattttaagccagacttctcccacatcaagctga +ccctagccccccagggcgggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctctgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagaccttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgtgtctcttccaacg +gtaaaggttcagtctctgttggtaaagttgaggacaatgcatcccagactgtgaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggtcgccggagcgtcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgaattca +agagaatcagggaggaaaggaacggaaagtactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaagcagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggaggccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtctcat-ctaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagtagaaatcaaacaaatccaagttcacaaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggagggcgccccagaaggcactgtttgttctatactcataaag +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaagatggggaagcagtcctcgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagctgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctctcccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctttccgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcagggctctcaccagatgttgttcaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgaaaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggcgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttggggccagaactgaacccctatctcgcccatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccccccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttaggcaattagaaccagttctactacctatgccagatattaggaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagccatgctctatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgagttcacattttt +ggttccccccacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggagatgatgtacacagcaaggaatgagaaccaagttgttcagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacccgg +tcccattggttcacctgacttccaaggcatactctttggcgttgccagccaac---gcaataagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---tgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atatggtgggcat-ctcacc------aacaacacccacttggctccagcagtggcccccctatttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggtggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcatactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgcttttcttgtaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaagcaaggggtgctgacagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccagtgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttacccacctgccccctgtg +ca-----------gtccgcttcatatgtta-----------atg---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactaccctttcagg-cacttcaag--------gg +tgggctc----c---gcatc-------------------ccagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcgaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacacctacaggcagccactcttcgccc +atttgcgtaggagaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305710.1/1-7459 |Norovirus GII isolate CMH-N105-13 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------acgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgt----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgta +cagtttgatg----------caaagtcagaaactataattgggttgccagacttaacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgttagcgacggcaaagc +tctgggggtccataaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccta---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctctgcgctctcggctcgctgttctc +aaaaccaattaaagacctattaggcaaactcaagccattgaacctactgcacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttt---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggtggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaagctgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgccagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagacctggcattggaaagacccacatggcgag +acatttggccaagagcatcgccaacaccatgagcggtgaccagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgatacatgtccagtcactttgaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgattatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtttatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ccctagccccccagggcgggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagacgaattccaactccaaggaa +atgacctccaaacatacaactttgacactaacagagtctctgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagaccttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgtgtctcttccaacg +gtaaaggttcagtctctgttgacaaagttgagaacaatgcatcccagactgtgaatgaggtacaaacagcac +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcgtcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgaattca +agagaatcagggaggaaaggaacggaaagtactccattgaggaatatctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagtagaaatcaaacaaatccaagttcacaaatctggagagttttgcaggtttagattcccaagacctatt +aggccagatgtcacaggactcgtactggaggagggcgccccagaaggcactgtttgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggatctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacaccgtcatatgtgccacccaagggcaagatggggaagcagtcctcgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagctgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaactacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcctgtgtatacggccgcactcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagagactcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctctcccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctttccgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcagggctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggatgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtctggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgaaaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcagcaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctgctacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggttccccccacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtaccagtggaaatgatgtacacagcaaggagtgagaaccaagttgttcagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagccaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagatacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaataagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacac-ctcacc------aacaacacccacttggctccagcagtggcccccctatttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcatactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaacgggcgcagg---------ag +gatcc---------aataatggctagtgcttttcttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaacgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattggcataaagcaaggggtgctgacagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttactcacttgccccctgtg +ca-----------gtccgcttcatatgtta-----------atg---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctttcagg-cacttcaag--------gg +tgggctc----c---gcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgggtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---aatg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacacctacaggcagccactcttcgccc +atttgcgtaggagaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305711.1/1-7459 |Norovirus GII isolate CMH-N117-14 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aaa---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtctgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcgaaggaacccct +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgaactatcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttaaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatggactggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccatcgagaacaaccatatgacagctctactcaaggataaggacagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaattgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataactaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacacttgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaattgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacagggagggctgtccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagcgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagttaactttggttcagggtggg +gcttctgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggctaagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaacgccaagagtatggacttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggagatcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtggggggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaaaattggcagaccaagcatcaaaagct +aatttaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaagaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggttaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgactcgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaacgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtccaaaaccaagcctttcaccctacccatcctaacaattggagagttgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttctgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaacgtcccaagt---gttcaaggtgaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatgggtttcccacttctatcaagaatcagctccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaaatgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctgt--------- +aa-------------atgtgcatagaccc----tttat---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagctcttc---------------- +----------------------ttcacttgg------gactccttcaac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcggactgggttcgaagtca +g---aggaacctgagcccctacatgg---acggggctctgcagacagcctttatcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctcaggaagaggggggagtcaca--------agcctag--t-----------gaaaagaatc-------- +-------att-tta----------------------at-a--------aa-ttct-------------ttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305712.1/1-7459 |Norovirus GII isolate CMH-S015-15 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cctccgagggacaaaccacca +aaa---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtctgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcgaaggaacccct +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgaactatcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttaaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatggactggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccatcgagaacaaccatatgacagctctactcaaggataaggacagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaattgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataactaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacacttgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacagggagggctgtccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagcgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagttaactttggttcagggtggg +gcttctgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggctaagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagctagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaacgccaagagtatggacttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggagatcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtggggggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaaaattggcagaccaagcatcaaaagct +aatttaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaagaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggttaccctctggtgtgccttgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgactcgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +agatggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaacgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtccaaaaccaagcctttcaccctacccatcctaacaattggagagttgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacctaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttctgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttaaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaacgtcccaagt---gttcaaggtgaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatgggtttcccacttctatcaagaatcagctccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtaaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaaatgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctgt--------- +aa-------------atgtgcatagaccc----tttat---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagctcttc---------------- +----------------------ttcacttgg------gactccttcaac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcgaactgggttcgaagtca +g---aggaacctgagcccctacatgg---acggggctctgcaaacagcctttatcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctcaggaagaggggggagtcaca--------agcctag--t-----------gaaaagaatc-------- +-------att-tta----------------------at-a--------aa-ttct-------------ttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305713.1/1-7456 |Norovirus GII isolate CMH-S040-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------acgccaccccttctaataaagaagaggt------tggtgcattctccaacat +aaaagttggactcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattgacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggttgccggacttaacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggaacacagaccggctactgaaccact +tcctggcacaatattggaaatgtgggatggtgagttttaccattattctgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +tccctatacggcctttagtaacaactgttataacttttgctgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaacgcaatcctctgtgcactcggttcactgttctc +aaaaccaatcaaagacctgttaggtaaactcaagccattgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttttggaccccccc +agatgtctctaattttgtagcctccctaataggtgattttgaattacaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttcttggtttcaccgccgagaaaataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagaccttgggaactacgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagccatagggaacaaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcgaggaaactgtccaccaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggattaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +gcatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggcatggggagccccgttaa +ggacgctctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +aaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cacaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaatatacaattttgacaccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggagacaatgagggtgggtacggcactcaagaacgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaatttaatgagtgtgaaataatctacaagaactctaagtatcgggtctcttccaacg +gtaaaggctcagtttctgttgataaagttgaggacaatgcatcccagactgtgaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctctagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgattccga-----aaagg +aagtggcacaaggca---gatgggaaattgaacccaaggatacagaaccagaaggtaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctccagtaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagcgtggact +acaacgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggagttaaggagttcttt +ggagttgaaattaagcaaatccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagaaggcactgtttgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggtaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacattgttgtcgcaggtgttcacaccgcagca +gcacgaggaggcaacactgttatatgtgccacccaagggcaagacggggaagcagtccttgaggggaacgag +gaccttggcacctattgtggcgccccaattttgggccccggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttaccacctggcacatatgaacctgcttacctagggggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagatcagttgagacccttcacagaacccaggggc +aaaccacctcgacctgcagttttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaacgaccactggaatggggagtctttcaccggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttagg +actgacaagatctacaaaaagataaagaagaggctcctgtgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgtagggtaggaatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgctgaggaccttctagcacctagccagcttgacgttggcgatttt +gtcatctcggtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtatcaggtctctcaccagatgtcgtccaagctcattcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggcctggttcccactcggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atcctcaggcagctgtactggacaaaggggcctaaccatgagaacccatacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgttggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagttcacagtctcccctagaaactcccctgg +tgaaattttacttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgtcagacaattagaaccagttctattgcctatgccagatattaggaataatttcttccatta +caatcagggtaatgac---ccaaaattgagattggtagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcctgtagggtcctcactaaaccgtcacctgattttgaattcacatttct +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagttccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccagttgaccccacagaagacacacctgg +tcccataggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaataagaatga--- +------------acagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tttcagagtc +ccaggattt---cgaggtacaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccatttggctccagcagtggcccccctgtttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagagtgggtccaacacttctaccaagaagctgccacagctca +gtctgaggtggcactcataaggttcattaacccagacactggcagagtcctttttgaggccaagttgcacaa +gcaaggctttataactgtggctcacaccggtgacaacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gattc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgacaaggaaatgctccaa +gcccaaattgaagccaccaaacgtctacaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctcccctacggatgccgcaaggggttctgtcggcgcgccgatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggactttcactcacttgccccctgtg +ca-----------gtctgcctcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatctcttaaag----------------------------------- +----------------------------------------tagattcttttcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcaagacaca---atcaaccaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctct---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaatactcacaggcagccactcttcgccc +atttgcgtaagcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtctgttcttc---tc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305714.1/1-7423 |Norovirus GII isolate CMH-S155-12 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +attggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcagaataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgaggaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccggctccacttgactatgt +caactttgaggcctg-ttccaggagaattgactttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaactatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccagatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagggaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcgttt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaacgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaaacatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgaactggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtggactcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +gggctcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +gtttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +ggtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgaccttccctggtg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtacgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggcacttaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcaggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctataacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcaaacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------tcaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305715.1/1-7498 |Norovirus GII isolate CMH-S238-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactacttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctccactgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305716.1/1-7498 |Norovirus GII isolate CMH-S251-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagttgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcatgacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacaccccgcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctaattatcagtgaggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcattgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacgacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaacttggacaagttcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagtttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaaccg----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgcgtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305717.1/1-7498 |Norovirus GII isolate CMH-ST001-17 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggggactacgagttgcaagggtcagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctacggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaagcatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggaacccccat +cacgtccgaaagaatgaattctggaatggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgccccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaacctcagcccacagcaaattaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggtataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaagcttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtacctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagaggacagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcatatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305718.1/1-7460 |Norovirus GII isolate CMH-ST002-18 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------acgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaagggcacc-------------aaagcaccc +agcagtga----------------tcagcattgccccacagttaaaatcgggtctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacgacggt---gcaaaa +cgaacacgaaaatactccatacactgtccctccattgagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggcaaagc +tctaggggtacacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactctactg +gaggcccgtttataccccta---actacttggtctccccggacacattaaagggcctcgctggtgagaagtt +tccctacacggcctttagcaacaactgttacaacttctgttgctgggtgcttgagctcaacgatacgtggct +taa---tagaaggtgcatttccagaactactggctttttcaaaccatatcagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaagaaggtggccaacgcaatcctttgtgcactcggctcgctattttc +aaaaccaattaaagatctgttaggcaaactcaagccattgaatctattacacttgcttgcgtcctgtgattg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccacc +agatgtctctaattttatagcttccttggtaggtgattttgagttgcaggggcctgaagacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacctagggaattatgcccttgacatactaaaattagt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacagcccttctcaaggacaaagacagcctcacggcttt +catgaagaccctagatctagaagaggagaaggcgagaaaactgtccaccaaatcatcttcaccagacatagt +tggcaccatcaacgccatattagctaggatagctgctgctagatccctcctgcataaagccaaagaggagat +gttcagcaggatcagaccagtggtcgttatgatctcaggcagacctggcatcggaaaaacccacatggcgag +acacttggccaagagcatcgccaacaccatgagtggtgaccagagagtcggtctcgttcctcgcaacggtgt +cgatcactgggacgcctacaggggagaaagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacaaccaacctagtcaatcccgctcccctcgactatgt +gaactttgaggcgtg-ttccaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagatcattttaagccagacttctcccatattaagctga +ctctagccccccagggtgggtttgacaaaaacggcaacaccccacacggtaagggtaccatgcggtccctaa +cccaggggtccctaaccgcaagagttgcaggtcttgtccatgagaggagagacgaattccagctccaaggaa +atgacctacaagtatacaattttgacaccaacagagtctccgcatttagaaaattggctgcagacaacaagt +atgggatcatggagacgatgagagtcggtgcggcgctcaagagcgtaaagaccctggaagatctcaaagttg +cattgagggatgtgaaattcaacgagtgtgaaataatttacaagaactccaagtaccgagtctcctccaacg +gtaagggctcagtttctgttgacaaagttgaagacaatgcatcccagactgtgaacgaggtacattcagcac +ttctcagacttaggcaagcgagggccagatactacatcagctgtttccaagacctcgtttataccctcatac +aggttgccggggcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtagctcaaggta---gatgggaagttgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctctagtaaaggcctaagtgatgaggagtacgacgagttca +agagaatcagggaagaaagaaacgggaagtactccattgaggaataccttcaagaccgagaccgctac---t +atgaagaagtagcagttgcccgggcgacagaggaagacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgccccacaaggaaacagaggaaggaggaaaggggtgtgcttggcttggtcaccggctcagaca +tcagaaagaggagaccagacgatttccaaccaaaaggcaacctatgggcagatgataccagaagtgtggact +acaatgaaaggcttgattttgaagcaccccctagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggaactcttt +ggagttgaaatcaaacaaatccaagtccataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagacgtcacaggactagtgctggaggaaggcgccccagagggtactgtctgttctgtgctcgtgaaa +agacccacaggtgagatgattccccttgcagtgagaatgggcactcatgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgctcctcacaggagcaaacgcgaagaacatggatctcggaactggccct +ggcgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgctacccaagggcaagatggggaagcagtccttgaggggaatgag +gaccttggtacctactgtggagccccaattctgggccctggtaaagcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacttaggaggcaaagaccct +agagtggaaagaggcccctccctgcagcaagtcatgagagatcagttgagacccttcacagaacccagaggc +aaaccacctagacctgcaatcttagaggaagccaaaaagacagtgatgaatgtcctagaacaaactattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggataaaaccacctctagtggtagtccccat +cacgttaggaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaggcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtacacggccgcacttaaggatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gctagggcttttggtggtcttatggacagcatgaaggcaagttgtgtggctcttccttgtagggtgggaatg +aatatgaatgaagatggccccatcatatttgacaagcactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaacccaacaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggctcctagccagctcgatgttggcgatttt +gtcatctcagtccaggagggcttgccatcaggagttccatgcacatcgcaatggaattcaatagcacattgg +atactgactttgagtgcgatggcagaagtgtcaggtctttcaccagatgttgtccaagctcactcttgtttt +tcattttatggggacgacgaaatcgtcagcactgacattaaccttgaccccatgaagctaacacaaaaactc +agggagtacggtctggttcccacccggcctgataaaactgaaggtcccctcgtcatagctgaagaccttacc +ggcctgacgtttctacgtaggtcaattgcccgggacccagctggttggtttggaaaattggaccaagattca +atcctcaggcaattgtactggacaagggggcctaaccatgagaacccgtatgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttacaagaaagtt +agcaaaatggtcatcaatgaaatcaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttc +agatggatgagattctccgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggcgcatcgctggcgacaccagttgttgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagctcctgcaggtgagttcacagtttcccctagaaattctcctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctaccttgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgccgccatccctccagggttcccatatgaaaatttgtcaccctcacaaatcacgatgtgtcctcatgt +tataattgatgttagacagttagaaccagtcctattgcctatgccagatatcaggaacaatttcttccatta +caatcagggtaatgat---ccaaaattgagattgatagctatgctttatactcctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaagccgtcacctgattttgaattcacattctt +agttccccctactgttgaatccaagaccaagcagttcacattgcccgtcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtaccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggaagggtcacacttgatggcgagctattgggcaccacacccttgttggcagttaacatctgcaagtt +caggg-----------------------------------------gagaggtgatagctaa---------- +----------gaacggagatgt-----------------------------------gagatcctacag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacaccgatggcaccccaattgaccccacagaagatacacctgg +ccccattggttcacctgactttcaaggcatactctttggcgttgcgagccagc---gcaacaagaatga--- +------------acaaaa-----ccctgccacg--------aga-----------gcccacgaagccaacat +taacactggtggggaccagtatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------tcttcaccccag- +--------ttggtgtggcaggtg---acactt---------cccaccccttcagacagtgggccctgcctcg +atacggtggacat-ctgacc------aataacacccacctggctccagcagtggcccctttattcccaggtg +agcagattctgttcttcagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgcctcgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggtagagtcctctttgaggccaagctgcataa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcatgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +ggttc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataagtgctgg---agctaatgctattaatcaaaaagttgagtttgactataacaaacaa--- +------------------------------ctccaaaatgcatctttctcccatgataaagaaatgctccaa +gcccaaattgaagccactaaacgtctacaacaagagatgattgacataaaacaaggggtgctgacagctgca +gggttctctcctacggatgccgcgaggggctctgtcggtgcgccaatgacaaaattagttgattggagcggt +actagatactgggcacctggtgccatgaggacaacaggttattcagggactttcacccacttgccccctgtg +ca-----------gtctgcttcgtatatta-----------acc---------------------------a +tcaagctg--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagatccttcttcctc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcctctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgactaggtc +gggtac-------------------a--------------------aggacttcagattgggtgcgtagcca +aaatgagaggttgagcccttacatga---atggagcgctgcaaatagcgtatgtaacaccaccatccagtag +ggcatca---actg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------tcaacactcacaggcagccgctcttcgccc +acctccgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaagtttgattagtttgttcttttcttt------ta-ctgttcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305719.1/1-7494 |Norovirus GII isolate CMH-ST005-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aaatctgtcaat +g------ac----agtaataatgccaccccttctaacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtgcccaaaggtacc-------------aaggcaccc +agcagtga----------------tcagcattgccccacagttaagatcgggcctaaaacattgacaatccc +ccc-----------------------------cgaacccccaaatgg------tgaagac------accgta +cagtttgatg----------caaaatcagaaactgtaattgggctaccggacttgacaacggt---gcaaaa +tgaacacgaaaatactccatacactgtccccccattgagtgagagggagcacagaccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagtctcgcgacgatagaactcacccccatatcactctactg +gagacccgtctacaccccca---actacttggtctccccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgctgttgggtgcttgagctcaatgacacgtggct +taa---cagaagatgcatttccagaactaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactattgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaataaaggatctattaggtaaactcaagccactgaatctactacacttgctcgcgtcctgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggagcttttt---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaaggccctgaagacttggctgtgga +gctcgttcccgtggtcatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattacgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaaaaccctggatctagaagaggagaaagcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctagatccctactacataaggccaaagaggagat +gttcagcaggatcagaccagtagtcgtcatgatctcaggcagacctggcattgggaaaacccacatggcaag +gcatctggctaagagcatcgccaacaccatgagtggcgatcagagggtcggactcgtcccacgcaatggtgt +cgatcactgggatgcctacaggggagagagagtggtcttgtgggatgactacggtatggggagccctgtcaa +agacgccctgacactgcaagaattggccgacacatgtccagtcactttaaattgtgataggattgagaataa +agggaagatgtttgatagtgatgttatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcctggtctatgcagagtcaccagagattgaaaaggtca +agagagatttccctggccagcctgacatgtggaaagatcattttaagccagacttttcccacattaagttga +ctctagcccctcagggtggatttgataaaaatggcaacaccccacacggcaagggcactatgcggtccctaa +cccaggggtccctaaccgcgagggttgcaggccttgtccatgagaggaaggacgagttccagctccaaggaa +atgaccttcaaacatacaattttgacaccaacagagtctccgcgtttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcgcagcgctcaagagtgtgaagaccttagaagatcttaaagttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaattctaggtaccgagtctcttccaacg +gtaaaggctcagtttttgttgacaaagttgaagacaatgcttcccagactgtgaacgaggtgcactcagcac +tcctcagactcaggcaggcgagggccagatactacgttagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtca---------------gtagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------acaggaggtgaatgagcccga-----aaagg +aagtggcccaaggca---gatgggaaattgaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagtcgctcgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaga +gaatcttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccagaagtgtggatt +acaatgagaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggagctcttt +ggagttgaaattaaacaaatccaaatccataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacagggctcgtgctggaggagggcgccccagagggcactgtctgttctgtactcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgctcctcacaggagcaaacgcaaagaacatggaccttggcaccggcccc +ggtgactgcggttgcccctacatctacaagcgtggcaacgacattgttgttgcgggcgtccacactgcagca +gcccggggaggcaacactgtaatatgtgctacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattttgggccctggcaaggcgcctaaactcagtacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccatccctgcagcaagtcatgagagaccagttgaggcccttcacagaacccagaggc +aaaccgcctagacctgcaattttagaggaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggataaaaccacctctagtggtagtccccac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagaccaggcttctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggctgcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaaaaggctcctatgggggtcagaccttggcacaatgatcaggtgc +gccagggcttttggcggtcttatggacagcatgaaggcaagttgcatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcatcctctctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgtcggcgacttt +gtcatctcagtccaggaaggcctgccatcaggagtcccatgcacatcgcaatggaattcaatagcacactgg +atactcactttgagtgcaatggcagaagtgtcaggcctttcaccagatgttatccaagctcactcttgtttt +tcattttatggggacgacgagatcgtcagcactgatatcaacctcgacccaatgaagttaacacaaaaactc +agggagtatggcctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaggattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggcgaggcctcgctgcacggtcctcagttttacaagaaagtc +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctctcgaacccgtcgctggggcctccattgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaacaattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaactcaacccctatcttgcacatttggctaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgccgccatcccacctagcttcccttatgaaaatttgtcacccgcccaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttttgccaatgccagatataagaaatgttttctatcatta +taatcagaataacagt---cccaaactcaggcttgtagctatgctttatactcctctgagggctaacaattc +aggtgatgatgtgttcacggtgtcttgccgcgttttaacgcgcccttctccagatttccagttcactttcct +ggtcccacctacagttgagtctaaaactaagaacttcaccctccccgttctcagagtttcagagatgacaaa +ctcaagg---ttccccgttgtcttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcagatgcacaactgatggtgagctgcttggtaccactatcttacaatctgtgtctatttgcaactt +caaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattgcaactcaccaacttggatggttcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggtgttgcaagccaac---gctcttccat------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgatt---ta---------aatcaagctc +caatgattt---tgatctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcacccttttagacagtggtccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaaccatttggccccagctgtgacaccgctcttccctggcg +agcaaatcttgttctttaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgtttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgacatcgcactggtgaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcacaa +acaaggtttcctcacaattgcagcatctggagaccatcctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgactaccagcttg +ggctcacttgtgggtgctgg---agccaacgccatcaaccaaaaagtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgactgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttaaagcacctatgacgcagatccttgattggaatggt +tctagatactgggctcctaactccatgaagacaactggctattcaggcacatttgcttcccaaggcatta-g +aa-----------gttcccctcatctgtc-------------ta---------------------------a +tcaaaccc--------------caaatgttgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----t---tccag-------------------acctaacactgtgt---------ccacaaagac +ttccac-------------------att--------------gtcgaggacaagtgattgggtcagagatca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---tttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305720.1/1-7498 |Norovirus GII isolate CMH-ST007-17 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaactcaatgactcatggct +tag---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactctaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgac---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctctcaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctgaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgctccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccactggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagtcggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaaccg----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtttc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305721.1/1-7459 |Norovirus GII isolate CMH-ST018-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------acgccaccccttctaataaggaagaggt------tggtgcattctccaacat +aaaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagtcaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggttgccggacttgacaacagt---gaaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggaacacagaccggctaccgaaccact +tcctggcacaatattggaaatgtgggacggtgagttttaccattattctgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccta---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +tccctatacggccttcagtaacaactgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaactgtcgatgatgggaagattaaaaaggtggccaacgcaatcctctgtgcactcggttcactgttctc +aaaaccaatcaaagacctgttaggtaaactcaagccactgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttttggaccccccc +agatgtctctaattttgtagcctcccttataggtgattttgaattacaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttcttggtttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagccatagggaacaaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +tggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacacaaggccaaagaggagat +gttcagcaggattaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +gcatttggctaagagcattgccaacaccatgagtggtgaccagagagtcggactcgttccgcgcaacggcgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggcatggggagccccgttaa +ggatgctctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +aaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgagaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cacaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggagacaatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctataagaactctaagtatcgggtctcttccaacg +gtaaaggctcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtgcagtcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgattccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatgcagaaccagaaggcaagaagggtaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagagagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagcgtggact +acaatgagagacttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaattaagcaaatccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccctagcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttcttacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacattgttgtcgcaggtgttcataccgcagca +gcacgaggaggcaacactgttatatgtgccacccaagggcaagacggggaagcagtccttgaggggaatgag +gaccttggcacctattgtggcgccccaattttgggccccggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttaccacctggcacatatgaacctgcttacctagggggcaaagatcct +agagtggaaaaaggtccttcccttcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctacttgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaacgaccactggaatggggagtccttcaccggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttagg +actgacaagatctacaaaaagataaagaagaggctcctgtgggggtcggaccttggcacaatgatcaggtgt +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgtagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaagtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttctagcacctagccagcttgacgttggcgatttt +gtcatctcggtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgtcgtccaagctcattcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggcctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggatcaagactca +atcctcaggcagctgtactggacaagggggcctaaccatgagaacccatacgagagcatggttccccattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtcctcagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgagaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattaggaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagagtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagttccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaacggtagggtcacacttgatggcgagctattaggcaccacacccttgttgtctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgattttcaaggtatactctttggcgttgccagtcaac---gcaataagagtga--- +------------acagaa-----ccctgccacg--------aga-----------gcccatgaagctaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tttcagagtc +ccaggattt---cgaggtacaccagcccacag---------------------------ttttcaccccgg- +--------ttggtgtggcaggcg---acacct---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccatttggctccagcagtggcccccctgtttccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctaccaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagttgcataa +gcaaggctttataactgtggctcacaccggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactggaaatgggcgtagg---------ag +gattc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgaatttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +gggttctcccctacagatgccgcaaggggttctgtcggcgcgccgatgacaagattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggttattcagggacttttactcacttgccccctgtg +ca-----------gcctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcaagacaca---atcaactaccctctcagg-tacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctct---------cgactaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------tcaacactcacaggcagccactcttcgccc +atttgcgtaagcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttctccctttc------ta-ctattcct---tt-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW305722.1/1-7494 |Norovirus GII isolate CMH-ST093-16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aaatctgtcaat +g------ac----agtaataatgccaccccttctaacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtgcccaaaggtacc-------------aaggcaccc +agcagtga----------------tcagcattgccccacagttaagatcgggcctaaaacattgacaatccc +ccc-----------------------------cgaacccccaaatgg------tgaagac------accgta +cagtttgatg----------caaaatcagaaactgtaattgggctaccggacttgacaacggt---gcaaaa +tgaacacgaaaatactccatacactgtccccccattgagtgagagggagcacagaccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagtctcgcgacgatagaactcacccccatatcactctactg +gagacccgtctacaccccca---actacttggtctccccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgctgttgggtgcttgagctcaatgacacgtggct +taa---cagaagatgcatctccagaactaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactattgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaataaaggatctattaggtaaactcaagccactgaatctactacacttgctcgcgtcctgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggagcttttt---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaaggccctgaagacttggctgtgga +gctcgttcccgtggttatgggtggcatagggatggttctcggcttcaccgctgaaaagataggccgcatgct +gtcgtccgctgcatcaacattacgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctagaagaggagaaagcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctagatccctactacataaggccaaagaggagat +gttcagcaggatcagaccagtagtcgtcatgatctcaggcagacctggcattgggaaaacccacatggcaag +gcacctggctaagagcatcgccaacaccatgagtggcgatcagagggtcggactcgtcccacgcaatggtgt +cgatcactgggatgcctacaggggagagagagtggtcttgtgggatgactacggtatggggagccctgtcaa +agacgccctgacactgcaagaattggccgacacatgtccagtcactttaaattgtgataggattgagaataa +agggaagatgtttgatagtgatgttatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcctggtctatgcagagtcaccagagattgaaaaggtca +agagagatttccctggccagcctgacatgtggaaagatcattttaagccagacttttcccacattaagttga +ctctagcccctcaaggtggatttgataaaaatggcaacaccccacacggcaagggcactatgcggtccctaa +cccaggggtccctaaccgcgagggttgcaggccttgttcatgagaggaaggacgagttccagctccaaggaa +atgaccttcaaacatacaattttgacaccaacagagtctccgcgtttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcacagcgctcaagagtgtgaagaccttagaagatcttgaagttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaattctaggtaccgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaagacaatgcttcccaaactgtgaacgaggtgcactcagcac +tcctcagactcaggcaggcgagggccagatactacgttagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcattcgttgtca---------------gtagga------tatccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------acaggaggtgaatgagcccga-----aaggg +aagtggcccaaggca---gatgggaaattgaacccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagtcgctcgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaga +gaatcttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccagaagtgtggatt +acaatgagaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggagctcttt +ggagttgaaatcaaacaaatccaaatccataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacagggctcgtgctggaggagggcgccccagagggcactgtctgttctgtactcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgctcctcacaggagcaaacgcaaagaacatggaccttggcaccggcccc +ggtgactgcggttgcccctacatctacaagcgtggcaacgacattgttgttgcgggcgtccacactgcagca +gcccggggaggcaacactgtaatatgtgctacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattttgggccctggcaaggcgcctaaactcagtacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccatccctgcagcaagtcatgagagaccagttgaggcccttcacagaacccagaggc +aaaccgcctagacctgcaattttagaggaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaaccacctctagtggtagtccccac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagaccaggcttctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggctgcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaaaaggctcctatgggggtcagaccttggcacaatgatcaggtgc +gccagggcttttggcggtcttatggacagcatgaaggcaagttgcatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcatcctctctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgtcggcgacttt +gtcatctcagtccaggaaggcctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atactcactttgagtgcaatggcagaagtgtcaggcctttcaccagatgttatccaagctcactcttgtttt +tcattttatggggacgacgagatcgtcagcactgatatcaacctcgacccaatgaagttaacacaaaaactc +agggagtatggcctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggctggtttggaaaactagaccaggattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggcgaggcctcgctgcacggtcctcagttttacaagaaagtc +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaacaattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaactcaacccctatcttgcacatttggctaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgccgccatcccacctagcttcccttatgaaaatttgtcacccgcccaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttttgccaatgccagatataagaaatgttttctatcatta +taaccagaataacagt---cccaaactcaggcttgtagctatgctttatactcctctgagggctaacaattc +aggtgatgatgtgttcacggtgtcttgccgcgttttaacgcgcccttctccagatttccagttcactttcct +ggtcccacctacagttgagtctaaaactaagaacttcaccctccccgttctcagagtttcagagatgacaaa +ctcaagg---ttccccgttgtcttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcagatgcacaactgatggtgagctgcttggtaccactatcttacaatctgtgtctatttgcaactt +caaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattgcaactcaccaacttggatggttcacccatagatccaacagatgatgtgcctgc +ccctcttggcacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgatt---ta---------aatcaagctc +caatgattt---tgatctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcacccttttagacagtggtccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaaccatttggccccagctgtgacaccgctcttccctggcg +agcaaatcttgttctttaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgtttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgacatcgcactggtgaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcacaa +acaaggtttcctcacaattgcagcatctggagaccatcctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggtgctgg---agccaacgccatcaaccaaaaagtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttaaagcacctatgacgcagatccttgattggaatggt +tccagatactgggctcctaactccatgaagacaactggctattcaggcacatttgcttcccaaggcatta-g +aa-----------gttcccctcatctgtc-------------ta---------------------------a +tcaaaccc--------------caaatgttgttaaatc---------------------------------- +-------------------------------------tactaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagttctccttccactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----t---tccag-------------------acctaacactgtgt---------ccacaaagac +ttccac-------------------att--------------gtcgaggacaagtgattgggtcagagatca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---tttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305723.1/1-7520 |Norovirus GII isolate CMH-N010-18 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgt------------aacaac +a------ac----aacgacaaggaaaaaccttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggatgccaaggaaccgct +tacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccactaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtgtttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacatatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatggaaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttagccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagag-- +-gat-------gacg---agtttatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatctacaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaagcaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatctgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcatcggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgataccttcactggtaagttggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaataccactatgatgcagactac +t-ctcgttgggattcaacacagcaaagggcagtacttgcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaaggactcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtggctcgagacccagctggctggtttggaaaactggatcaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggagggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagttccaccaaactttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccctagcagtgcctttgttgttcagccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatcctttcaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctccgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggtgct---------------------------------g +ccaggaa----------------gagctaatcttgggg--------------atgc---------------- +------------------------------tgcccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttccactgttacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggtcc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttcttttt-----c-tt-------------ttctt- +-------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305724.1/1-7502 |Norovirus GII isolate CHDC2005 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaacgcaaaatcttcaagtgaca---------------acctgttttctaacat +gactgtcacttttaagaaag----ccctcggggcgcggccgaaacagccg-cccccgggagaaacaaagcaa +acatcaaa---------------accaccaagaccaccaacaccggaattggtg-------aagaaaatacc +tcc-----------------------------acccccacctaacgg------cgagggcgaacccgtggtg +gtgtataggg----------tagg---agaaggggtgtcaggactgcctgacctaaccacagtcacacagcc +tgacgcacaaaacacagcttacagcatccccccactcagtcagagagaacctggcgacgccaaagaaccgct +gccaggatcaatcatagagatgtgggatggggagatataccattacgggctgtacgtggaacgaggtcacgt +gcttggggtgcacaaaccacccgctgcgataagcctcgccaaaattgagttaacaccactgtctctgtactg +gagggtggtttatacacccc---agtacttgatagctccagacaccttgaagaacctcaatggggagtcctt +cccttacacagcctttgacaacaactgctacgcattttgctgctgggttttagacctcaacgactcttggct +cag---cagaaggatgattcaaaggaccaccggtttcttcaggccataccaggaatggaacagaaagcccct +accaactattgatgaacccaaaatcaagaaggctgctaatgccttcctttgtgctctatcctcactcttcac +taggcccatcaaggacattattgggaaactcaagcccctaaatattcttaacatactggcatcctgtgactg +gacctttgcaggcatagtggaatccctcattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgctatgattgctcccttgctcggtgattacgagatgcagggccctgaagatctggccgttga +gctcgtacctgtggtgatgggagggataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +atcgtcagctgcctctacattaagagcttgcaaggacctcggggcctacgggctagaaatactcaaactagt +catgaaatggtttttccccaagaaagaagaggccaatgagttggctatggtgagagccattgaggacgcggt +gctggacctagaggctatagaaaacaaccacatgaccactctcctcaaagacaaagacagtttggcaactta +catgaggactcttgacctagaagaggagaaggcgcggaaactgtccacaaagtctgcgtcacctgacatcgt +gggcacgataaacgcgttgttagcaaggattgcagctgcaagatcgctggtccacaaggcaaaggaggaact +atccagcagacaacgacctgttgtcgtaatgatatctggcaggcctggcatcggaaagacccatcttgctag +agaactggccaagaaggttgccgcgacgttggcgggtgaccagagggtggggttgatacccaggaatggtgt +ggaccactgggacgcctacaagggtgagagagtggtcctatgggatgattatggaatgagtaaccctattca +agatgcactgaggctccaggagctggccgacacttgccctctaacactaaattgtgacaggattgagaacaa +agggaaggtgttcgacagcgacgccatagtcataacaaccaatcttgcaaaccctgcgccgctggattatgt +caacttcgaagcctg-ctcgagacgcatagacttcttggtgtttgcagatgctccagacgtcgagaaggcga +agcgcgactttcctggacagccagatatgtggaaagaccactacaggccagatttctcacacatcaagctcc +agctggcccctcaaggaggttttgacaagaacggcaacaccccacatggcaagggcgtgatgaagtccttga +ctgtggggtcactgattgccagggcttctggcttgctccatgagaggatggacgaatttgagctccaaggac +caactctgccaaccttcaactttgaccgcaacaaggtcgctgccttcaggcaattggcagctgaaaacaggt +atggcatgatggatacacttagagttggcaaccagttaaagagtgtcaaaaccatgagcgagctcaaacagg +ccataaagaacatcactatcaagaagtgccaaatagtttacaatgggtgcacctacaccatggaatctgacg +ggcgtggtgcagtctcagttgaaaaggtgcaaagtacaacagttcaaaacaataatgagcttgtgggggccc +tataccatcttagatctgcaagaataaggtactatgtcaaatgtttccaagaggcactctattctgtgttgc +aaattgctggtgcagctttcgttacatcacgcattataaaacgcatga------acatctcaaacctgtggt +caaaaccgccagttgaagatagtgatga--------gactgaaagcaaggaaggctgccctaaacccagaga +tgat----gaatatg---aatttgtagttgattcaaaggacatcaaggtggaggggaagaagggcaagaaca +aatctggccgaggaaagaaacacacagctttctccagcaaaggcctcagtgatgaggagtacgacgagtaca +agaggatcagggaggagcggaatggtaagtactcaatagaagagtacctacaagacagagacaggtac---t +atgaggaactcgccatcgccaaagccactgaagaggacttttgtgaagaggaggaggtgagaattcgccaaa +gaatattccgcccaaccagaaaacagagaaaggaagagagggccacactcgggctagtcacaggatcagaga +tcaggaaaagaaacccagaagacttcaaaccaaaaggaaaactgtgggctgatgataacagaagtgtggact +acaacgaaagaatagactttgaggcacccccaagcatctggtccaggatagtcagctttggctcgggctggg +ggttttgggtctctc-caagcctcttcataacctcaacacacgtgataccgaaaggaatcacagaggctttc +ggggtacccatcaatcaaattcaggtccacaagtcaggtgagttctgtcgcctgcggtttccaaaaccaatc +agaactgatgtgagcgggatgattctggaagagggtgcgcccgaaggaactgtcgcaaccatccttgtcaag +cggccaacaggagagctgatgccacttgcagccagaatggggactcatgccacaatgaagattcagggaaga +atggtgggtggtcagatgggcatgttgctcactggatcaaatgccaaaagcatggaccttggtacaacacct +ggtgactgtggctgcccttacatatacaaaaggggcaatgactttgtagtcattggtgttcacactgcggca +gcacgtgggggaaacacagtcatttgtgccacacagggcagtgaaggtgaggccaccttagaagggggcgac +aacaagggaacctactgtggtgcccccatcctaggacctggcagtgcaccaaaattaagcaccaaaacaaaa +ttctggagatcatctaacgcgccacttccaccgggcacttacgagccagcctatctgggcggaaaagaccca +cgtgtgaagggaggcccctctttacaacaagttatgagggaccaactcaaaccctttactgagcccagagga +aaaccaccaaacccgagtgtcctggaatcggcaaagaaaaccatcatcaacgtactcgaacaaaccattgat +ccaccccaaaaatggacctatgcccaagcttgtgcttctcttgacaagacaacctccagcggacacccgcac +catgtccgcaagaatgaattctggaatggcgagtcttttacaggaaaattggcagaccaggcatcaaaagca +aatctcatgttcgaggaaggcaaacacatgacaccagtctacacagcagcactaaaagatgaattggtgaag +actgacaagatttatggcaaaatcaagaaaaggctcctatggggctctgacctctccaccatgataaggtgt +gctagggcctttggtggactcatggatgaatttaaagcacactgcatcactcttccaatcagggttggtatg +aatatgaatgaagatgggcccataatctttgagaaacactccaggtacagataccactatgatgcagactac +t-ctcgttgggactccacgcaacagagagcagtgctagcagcagcacttgagattatgg-tgaggttttctg +ctgaaccacaatt-ggcacaaatagtggctgaggacttgctttcaccgagtgtagttgatgtgggtgacttc +aaaatcacaatcaatgaaggcctaccctctggagtaccatgcacatcacaatggaactccattgcccactgg +ctacttaccctgtgcgctctgtctgaagtgacggggttgggtcctgacatcatacaagccaattctgtttat +tccttctatggcgatgatgagattgtgagcacagacataaaattagatccagaaaaattgactacaaagctc +aaggagtatggtctcaaacccacgcgccctgacaaaaccgaagggccgcttgtgatcagtgaagacttgaac +ggtctgacattccttcgtcggacagtcacccgtgacccagcagggtggtttggaaagctagaccaaagttcc +atcctcagacaactgtactggactagaggacccaatcatgaagaccctaatgaaaccatgataccgcatgca +caaaggccagtgcaactcatggcactgttgggtgaatcatccctgcatggcccctctttttacagcaaagtc +agcaaattggttatatctgaactcaaagaaggaggaatggatttttacgtgcccaggcaggagtcaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcaggtgcagcaatagcagcacctctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtagtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaatttcccaattgacaatctgagcgcagcacagattacaatgtgcccgcatgt +gattgtggatgtcagacaattggaaccaatcaaccttccgatgcctgatgtccgtaataatttctttcatta +taatcaagggtctgat---tcgaggttgcgtttaattgcaatgttatacacacctcttagggcaaataattc +aggagatgatgttttcactgtgtcttgtagggtattaactaggcctagccctgatttctcattcaattttct +cgttccacctactgtggaatcaaagacaaagcctttcaccctccccattttgactatttctgaaatgtctaa +ttctaga---tttccagtgccaattgactctctgcacactagcccgactgagaacattgttgtccagtgcca +aaatgggcgcgtcacccttgacggtgagttaatgggcaccactcaactcttgccgagtcaaatatgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccgg---------------------------------tg---- +-------accaag----------------------------------ctgacacggcaacccctagattgtt +caattattattggcacatacaattggataacctaaatggaaccccctatgaccctgcagaagacataccagc +ccctttgggaacaccagacttccggggcaaggtctttggcgtagctagccaga---gaaaccctgac----- +------------a------------gcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcgccccgaaattgggttc-------cctagaaat-----atccactgaatc +cagtgactt---tgactcaaaccaaccaacaa---------------------------ggttcaccccag- +--------ttggcattg---gggttgacaatg---------aggcagattttcagcaatggtccttacctga +ctactccggtcag-ttcact------cataacatgaacttagccccagctgtcgcccccaatttccctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcg------gtcta--------- +--acgggattctggactgcctggttccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtagccctggttagatatgttaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggcttcatgactatagctaagaatggtgactctccaataactgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctagtgccatcaatcaaaaagttgattttgagaataataaatac--- +------------------------------ttacaaaatgcatcttttgctcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgatatgattgctatcaaacaaggggtcttgaccgctggc +ggcttctcccccactgatgcagcccgtggggcaatcaatgcccccatgacaaaagttttggattggagtgga +acgaggtactgggcaccaaacgccacctccacaacctcaatgtcaggtggcttcacaagccaa--------- +ac--------------tgtgcacagaaccgcaccaaat---------------------------------t +ttaagac----------------gaaccaggcccccaag--------------------------------- +----------------------------------------------tccgcacccagc------------ag +tgggtctt-----------cagtg------------aggtcaaattcaacccaactcactagcttgagtt-- +----------cacact-----cctc---------------cgggtcgtctcgatccagcgggtctacggttg +tcagctc--------------------------------------attgccat------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ccggatcccttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacaaccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-----------------------------------------------------ttaaattt- +------aac----ttgg---att------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305725.1/1-7499 |Norovirus GII isolate CHDC6261 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacatc +a------ac----aacgacaaggaaaagtcttcaagtgaca---------------gcttgttttcaaacat +gactgttacttttaagaaag----ccctcggggcgcgacctaaacaaccg-cccccgggggaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------acccccacccaacgg------cgaggatgaacctaaggtg +gtgtacaggg----------tggg---agagggtgtgtccgggttgcccgacttaacaaccgtggcgcggcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagggaggtaggcgaagctaaagagccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctatacgttgagcggggacacat +acttggggtgcacaaaccacctgctgcaataagcctcgccaaaatcgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttaagtggagaatcatt +cccgtatacagcctttgataacaactgttatgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttctacaggccatatcaagattggaatagaaagccctt +gccaaccatggatgagccaaaaatcaagaaggtcgcgaatgctgttctgtgcgctctctcttcactcttcac +tagacccatcaaggacattattggaaaactcaaaccaatgaacatcctcaacatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtgatgggagggataggtttggtgttaggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagacctaggagcctatggattggagatacttaaattagt +tatgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cttggacttggaggcaatagaaaacaaccacatgaccgctctcctcaaagacaaagacagtctggctacata +catgaggactcttgacttggaggaagagaaagcaaggaaattgtccaccaaatctgcatcgcctgacattgt +aggcacaataaatgcattattggcaaggattgcagccgccaggtcactagtccataaggctagagaggagct +ttcaagcagacagaggcctgtcgttgtgatgatatcaggcagaccaggcataggaaagacccatctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaagaattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgattatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaggtgttcgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccactggattatgt +caattttgaggcttg-ctccagacgcatagacttcttagtgtatgcagacgcacctgacattgagaaggcca +agcgcgacttccctggccaaccagatatgtggaaagatcattacagaccagattttacacacatcaaacttc +aactagcaccacagggaggttttgataagaatggtaacaccccacatggtaaaggtgtaatgaagtctctga +cgattgggtcattgatcgccaggacttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaactttcaatttcgatcgcaacaagatcgctgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacgctgagggtcggtaaccaacttaaaagtgtcaagaccatggatgagctcaagcagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacaccatggagtccgatg +gaagaggcagggtctcagttgacaaggtgcaaaatacaacagttcaaactaataatgagctttcaggagcgc +tacaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcagcctttgtcaccttacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaggagagtgatga--------acctgaagacaaagaagggtgccccaaacccaga-- +-gat----gaagatg---atctcaccatcgattccaaggacattaaagtggaaggaaagaagggcaagaaca +aatccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtata +aaagaatcagggaagaaaggaatggcaaatactcaatagaggagtacctccaggacagggacaggtac---t +atgaagaacttgccatcgctaaggccactgaagaggacttctgtgaagaggaggagatcaaaattcgtcaga +gaatcttccgtcccaccaggaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcagaga +tcaggaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcaccccctagcgtttggtcaagaatagtcaactttggcacaggctggg +gattctgggtttctc-ctagtctcttcataacctcaacacacgtgataccaaaaggaatcacggaggccttt +ggagtacccatgaaccaaatccaaattcataaatcaggggaattctgccgcttaaggtttccaaaaccaatc +aggccagacgtgagtgggatgatcttggaagagggtgcccccgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagctgatgcctcttgcagccagaatgggaacccacgccacaatgaaaattcaaggaaga +acggtgggtggccagatgggcatgttgctcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggagggaacacagtcatatgtgccacacaaggaagcgagggtgaagccactcttgaggggggtgac +aacaaaggcacctattgtggagcccccattttggggcctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctaccgccaggcacctatgaaccagcatacctgggtgggaaggatcca +cgtgtgaagggtggtccatctttgcaacaggtcatgagggatcagcttaaacctttcacggaacccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagaacaggtcattgac +cccccccagaagtggtcttatgcccaagcttgtgcatctcttgacaaatcaacctccagtggatacccacac +cacgttcggaagaatgactactggagcggtgaatccttcataggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaggaaggcaaacacatgtcgccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatttatggtaaaatcaagaaaaggctcctatggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctatcagggttggcatg +aacatgaatgaagatggccccataatatttgagaaacattccaggtacagataccactatgatgcagattac +t-ctcgctgggattccacgcagcagcgggcagtgttggcagcagcactagaaatcatgg-tgaggttctctg +ctgaaccacagtt-agcacaaatagttgctgaggatctgctggcaccaagtgtggttgatgtgggtgacttt +aaaattaccattaatgaaggcctaccttctggtgtgccttgcacctcacaatggaactccattgcccactgg +ttgctcactctatgtgccctttctgaagtgacaggactaggccccgacatcatacaagccaattccatgtac +tctttctatggtgatgatgagattgtaagcactgatataaaattggacccagagaaactgactgcaaaactc +aaagagtatggcctcagacccactcgccccgacaaaactgaagggccgctggtggtcagtgaagatttggat +gggttgacgttcctccgccgaacagtcacccgtgacccagcaggttggtttggaaagctggatcaaagttcc +atcctcaggcagctatactggacaagaggacccaaccatgaagatcccagtgaaaccatgataccacatgcg +caaagacccgtgcagctcatggcactgctgggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtgcttcttaacttagagttaggcccagaaataaacccctatttggcacaccttgctaggatgtacaa +tggttatgcaggtggatttgaagtgcaggttgtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccctaattttccaattgataatctgagtgcagcacagattacaatgtgtccacatgt +gattgtggacgtcaggcaattggaaccaatcaatctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaagggtctgat---tcgaggttacgcttaattgcaatgctgtacacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcctgcagggtgttaactaggcctagccctgatttctcattcaatttcct +tgtcccgcccactgtggagtcaaagacaaaacccttcacccttcccattctaactatttctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctgcacaccagcccgactgaaaatattgttgtccagtgcca +gaatgggcgcgtcactcttgacggcgagctaatgggcaccacccaactcttgccgagtcaaatatgcgcttt +caggg-----------------------------------------gcactctcaccagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ctgacacagcaacccctaggctttt +caactattattggcatatacaattgaataacctaaatggaaccccctacgaccctgcagaggacataccagc +ccctttggggacgccagactttcggggcaaggtctttggcgtagccagccaga---gaaaccctgat----- +------------a------------gcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggccgtttcgccccaaagttgggctc-------cctggaaat-----atccactgaaac +cgacgactt---taaccaaaaccaaccaacaa---------------------------gatttaccccag- +--------ttggcattg---gggttgataatg---------aggcagattttcaacaatggtccttgcctga +ctactccggtcag-ttcacc------cacaacatgaacttggccccagctgtcgcacccaacttccccggtg +aacagcttctcttcttccgctcacagctgccat------cctctggtgggcg------gtcca--------- +--gtgggattctagactgcctggtcccccaagaatgggttcaacacttctaccaagaatcagcccctgcgca +aacacaggtggctctggtcaggtatgtcaaccctgatactggtagagtgttatttgaggccaagctacataa +attaggtttcatgaccatagctaagaatggtgactctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacactagcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgtg +gggtctttagttaatgcagg---ggctggtgttattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgatatgattgctatcaaacaaggggttttaaccgctggc +ggtttttcccccactgatgcagcccgtggggcgattaacgctcccataacaaaagtcctggattggagtgga +actagatactgggcaccaaacgccacctccacaacctctatgtcaggtggcttcacaggtcaa--------- +ac--------------tgtgcacaaaaccacaccaaat---------------------------------t +ttaaaac----------------gaaccaagcccccaag--------------------------------- +----------------------------------------------tccacacccagt------------ag +tgggtctt-----------cagtg------------agatcaaattcaacccaactcactagcttgagct-- +----------catact-----catc---------------tgggtcgtctcgatctagcggatccacgattg +tcagctc--------------------------------------attgccat------------------c +ttccag---------------------------------------caggaccagggattgggtcaaccaaca +gaatcttaatttggaaccacacatgc---ctgggtctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcctaa +aagtgttttgga-ctcctggtcatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaaga-tt-------- +-------att-----------------------------------------------------ttaaattt- +------agt----ttag---att------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305726.1/1-7505 |Norovirus GII isolate CHDC5365 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------accaccacccaacgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtcggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaactaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagagcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtatcaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcatcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttaaggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaggcaatagaaaacaaccacatgaccactctcctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaagctgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaagttgcatcaaccctgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgaggcttcaagagttggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagactttttggtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttctggcttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgaccgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +atggtatggtggacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgaataca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacagatac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaagatccgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaatgagaggatagactttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcacaaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgtagcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgagggaggtgac +gacaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacatatgaaccagcatacctaggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcggcccgacaaaaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggagcaaagttcc +atcctcaggcagctatactggacaagaggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccctaatttccctattgacaatctgagcgcggcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaggttctgat---tcaagattacgtttgattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcattagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacatcaacccctaggctatt +caactattattggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccggggcaaggtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggttc-------cttagaaat-----aatcactgaatc +tgatgactt---tgacttaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagaatttcagcagtggtccttacccaa +ctattctggtcag-tttact------cataatatgaacttagccccagctgtcgcccccaactttcctggtg +aacagctacttttcttccgatcacagctgccat------cctctggtgggcg------atcta--------- +--acggggtgctagattgcctggtcccccaggaatgggttcaacacttttaccaagaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggcagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgctaaat +gcacaaattgaggcgacaaagaggctgcaggctgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccagtgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcaccgacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgctctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------tagaactagggactgggtcaatcaaca +gaatctcaatttggaaccatacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------gat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305727.1/1-7505 |Norovirus GII isolate CHDC4090 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttactttaaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacacctgaattggtg-------aaaagaatacc +ccc-----------------------------acccccacccaacgg------cgaggatgaactaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtaggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagaaggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatacacggcctttgacaacaactgttacgctttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cctggacttagaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagacagcctggccacata +catgaggactcttgacatggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccacctcgccag +agagctagccaagaaaattgcatcaacactgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttgcacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacagtggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaatcgctggtgcggcctttgtcacctcacgcattgcgaggcgcatga------acatctcaagcctctggt +cgaagccacccgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---atctcactatcgattccaaggacatcaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacaggtac---t +atgaagagcttgccattgctaaggccactgaagaggacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgccccaccagaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcgccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcctatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtaagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgcctcttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagttatatgtgccacacaaggaagcgaaggtgaagccacccttgagggaggtgac +aacaagggcacctattgtggagcccccattttaggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggaggtcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctgggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaatcaacctccagtggacacccgcac +cacgttcggaagaatgaatactggaatggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaagaaggcaaacacatgccaccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgcatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatatagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgagattctctg +ctgaaccacagtt-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccctgacatcatacaagctaattccatgtgc +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcgccccgacaaaaccgaagggccgctggtaatcagtgaagacttgaat +ggtttgacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggatcaaaattcc +atcctcaggcagctatactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactgctgggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagctatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtgggtttgaagtgcaagtggtcctggctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccccaacttccctattgataatctgagcgcagcacagatcacaatgtgcccgcatgt +gattgtggatgtcaggcagttggaaccaatcaatcttccgatgcctgatgttcgcaacaatttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctacacaccagcccaactgagaatatcgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccactcaactcttaccgagccaaatatgtgcttt +caagg-----------------------------------------gaacacttactagat----------- +-----------caacaaacagg------gtcag---------------------------------tg---- +-------accaag----------------------------------ccgacacagcaacccccaggctatt +taactatcattggcacatacaattggataatctaaatggaaccccctacgaccctgcagaggacataccagc +tcctttgggtacaccagacttccggggcaaagtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cctagaaat-----aaccactgaatc +taatgactt---tgactcaaaccagccaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggtagattttcagcaatggtccttacctga +ctattccggtcag-cttact------cataacatgaacttagccccagctgtcgcccccaattttcctggtg +aacagcttcttttcttccgatcacagctgccat------cttctggtgggcg------gtcta--------- +--acgggactctagactgcctggtcccccaggaatgggttcaacatttctatcaagaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatgggtattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgtg +ggatctttggttaatgcagg---ggctagtgttatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcatcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttggattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccgcaccaaat---------------------------------t +ttggagc----------------gaaccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcactagcttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +ttagctc--------------------------------------gttgccgt------------------c +ctctag---------------------------------------taggactagggactgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcacagacagccgctatttgcac +accttcgtagaaggggggagtcaaa--------tgcttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------aat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305728.1/1-7505 |Norovirus GII isolate CHDC4031 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------gcccccacccaacgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtaggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatacacggcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgtcctgtgcgctctctcctcactcttcac +tagacccatcaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatcccttattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccctgaagacctggccgtgga +acttgtgcccgtggtaatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaagaagaggctaacgagttagccatggtaagggccatcgaggatgcagt +cctggacttagaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagatagtctggccacata +catgaggactcttgacctggaggaagaaaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattactggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaaggattggactggtgcctagaaatggtgt +agaccactgggatgcctacaagggggaaagagtggtgctatgggatgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggctgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caattttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +ctattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaagggtgtcaagaccatggacgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacttacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgaaaaatgcaacagtccaaactaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgtcaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcggcctttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagcccaga-- +-gat----gaagatg---atctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcagctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacaggtac---t +atgaagaacttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgccccaccagaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaaaccaaaaggaaaattgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggagaattctgccgcttacggtttccaaaaccaatc +aggccagacgtaagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgcctcttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagttatatgtgccacacaaggaagcgaaggtgaagccactcttgagggaggtgac +aacaagggcacctattgtggagcccccattttaggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctgggtgggaaagatcca +cgtgtgaagggtggtccgtctctgcagcaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaatcaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aatctcatgtacgaagagggcaaacacatgccaccagtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggcaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagtt-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcgccccgacaaaaccgaagggccgctggtgatcagtgaagacttgaat +ggtttgacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggatcaaaattcc +atcctcaggcagctatactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactgctgggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaagtggtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaacttccctattgacaatctgagcgcagcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagagtatcgttgtccagtgtca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgaaccaaatatgtgcttt +caggg-----------------------------------------gcacacttactaggt----------- +-----------caacaaacagg------gccag---------------------------------tg---- +-------atcaag----------------------------------ccgacacagcaacccccaggctatt +caaccatcattggcacatacaattggataatctaaatggaaccccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccggggcaaagtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cctagaaat-----aaccactgaatc +tgatgactt---tgacccaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagattttcagcaatggtccttacctga +ctattccggtcag-tttact------cataacatgaacttagccccagctgtcgcccccaattttcctggtg +aacagcttcttttcttccgatcacagctgccat------cttctggtgggcg------gtcta--------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaggaatcagcccccgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatgggtattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggctagtgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttggattggagtgga +acaaggtactgggcaccaaatgccacctccacaacttcaacgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcagagc----------------gaaccaggcccccaaa--------------------------------- +----------------------------------------------ctcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcactagcttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------cagaca---cggtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcacagacagccgctatttgcat +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------aat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305729.1/1-7516 |Norovirus GII isolate CHDC2904 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggagttggtc-------aagaaaatccc +tcc-----------------------------ccccccgcccaacgg------ggagggtgagccagtggtc +tcttacagtg----------tcaa---agatggcgtttccgggttgcctgagctctccactgtcaggcaacc +agatgagaccaacacggcatttagtgttcccccactcaaccagagagagaacagggatgccaaggagccact +gactggaacaatcctggagatgtgggacggggaaatctaccattatggcttgtacgttgaacgaggcctggt +gcttggcgtgcacaaaccaccagcagccattagccttgccaaggttgaattggcaccactttctttgttctg +gagacctgtgtacgcccccc---agtatctcatctccccagacactctcaggagactgcatggggaatcatt +cccctacacagcctttgacaacaactgctatgccttctgttgctgggttttagacctgaacgattcgtggct +gag---taggaggatgatacagaggacaactggcttcttcaggccttaccaagactggaataggaaacccct +tcccaccatggatgactccaaactgaagaaggtggccaacatattcctgtgtgctttgtcttcactattcac +caggcccatcaaggacataatagggaagctaaggcctcttaacatcctcaacattttggcttcatgtgattg +gacctttgcaggcatagtggaatccctaattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactatgagctacaggggcctgaggacctcgcggtaga +gctagtgccagtagtgatgggggggataggtttggtgttgggattcaccaaagaaaagattgggaagatgtt +gtcatctgctgcatccacattgagggcttgtaaagaccttggtgcatatggactggagatcctaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaagcgagttagccatggtgagatctatcgaggacgcggt +gttggacctcgaagcaattgagaacaatcacttgaccaccctgcttaaggacaaggacagcctggcgactta +catgagaactcttgaccttgaggaagagaaagccaggaagctctcaaccaagtccgcctcacctgatatcgt +gggtacaatcaacgctctcctggcaaggattgcggctgcccgctccctagtacatcgggcaaaggaagaact +ttccagcagaccgagacccgttgttgtgatgatatcaggaaagccagggataggaaagactcacctagccag +agagctggccaagaagatcgcaaccaccctcacaggggaccagagggtgggcctcatcccacgcaatggcgt +tgaccactgggatgcatacaagggagagagggtcgtcctttgggacgactacgggatgagcaaccccatcca +tgacgctctcagattgcaggagcttgctgacacttgccccctgacactaaattgtgataggattgaaaacaa +aggtaaagtttttgacagtgatgccataattatcaccaccaacttggccaacccagcaccactggactatgt +caattttgaggcctg-ctcgaggcgcattgatttcctcgtgtacgccgacgcccctgatgtcgaaaaggcga +agcgcgacttcccaggccaacctgacatgtggaaaaatgctttcagccctgatttctctcacataaagctga +tgctggccccacagggtggttttgacaagaacggcaacaccccacatgggaagggcgtcatgaagaccctca +ccattggttccctcatcgcccgtgcttcagggctcctccacgagaggctggatgagtacgagctgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcagacagcttgctgctgaaaataagt +acggactgatggacacaatgagggttggagggcaactcaagggcgttagaaccatgccagagctcaagcaag +cactcaagaacatttcaattaagaggtgccagatagtgtatggtggcagcacttatacacttgaatctgatg +gcaagggtggtgtgaaggtcgacagagttcagagtaccaccgtacagaccaataatgagttagccggcgccc +tgcaccacctcaggtgcgccaggatcaggtactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgcaggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaggacctttggt +ccaagccacaactggagaacacagaaga--------agctgctagcaaagatgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtttcatctgatgacatcaagaccgagggtaagaaaggaaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaagggtctcagtgacgaggagtacgatgagtaca +aaagaatcagggaggaaagaaacggcaagtactctatagaggagtatctccaagacagagacaagtat---t +atgaggaggttgccattgccagggcgactgaggaggacttctgcgaagaagaagaggccaagatccgtcaaa +gaatctttagaccaacaaggaagcaacgcaaggaggagagggcttctctcggtttagtcacaggctctgaga +tcagaaaaagaaacccagatgacttcaaacccaagggaaaactgtgggccgatgacgacagaagtgtcgatt +acaatgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttctc-ctagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttt +ggggtgtccatcaaacaaatccaggtacacaaatcaggcgaattttgccgcttgaggttcccaaagccaata +aggactgatgtgacgggcatgatcttagaggaaggtgcccccgaagggaccgtggccacactactcatcaag +aggccaactggtgagctcatgcccttagcggccaggatgggcactcacgcaaccatgaagatccaaggtcgc +actgttgggggccaaatgggtatgctcctgacagggtccaatgccaaaagtatggacttgggcaccacaccc +ggcgactgtggttgtccctacatctacaagagagggaacgactacgtggtcatcggagttcacacagccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgaaggtgaggccacacttgaaggcggtgat +aataaaggtacttactgtggtgccccgatcttaggtccaggaagtgccccaaaactcagcaccaaaaccaag +ttctggaggtcatccacagcaccactccctcctggtacctatgagccagcctacctcggtggtaaggatccc +agggttaagggtggtccatcactacaacaagtcatgagggaccagttgaaaccattcactgaaccaagaggt +aaacaaccaaaaccaagtgtgttggaagctgccaagagaaccatcattaatgttcttgaacaaacaatagac +ccacctcagaaatggtcatttgcgcaagcttgcgcttctcttgacaaaaccacctccagtggccatccacac +catatacggaagaatgaatgctggaatggagattcctttacaggtaaattggcagaccaggcctcaaaggcc +aacttgatgtttgaggagggaaagaacatgactccagtttacacaggtgccctcaaggatgagttagtcaaa +actgacaagatatatggcaagatcaagaagaggctactttggggatcggacctggcaaccatgatccggtgt +gcccgggctttcggaggcctaatggatgaactcaaggctcactgtgtcacactccctgtcagagttggtatg +aacatgaatgaagacggccccatcatctttgaaaaacattctaggtacaggtaccactatgatgcagattac +t-ctcgatgggactcaacacaacagagagccatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccacactt-agctcaaatagttgcagaagaccttctatcccccagtgtgatggatgtaggtgatttt +aagatatcaatcaacgagggccttccctctggggtgccttgcacctcacaatggaactccatcgcccactgg +ctcctcaccctctgtgcactctctgaagttacggacctctcccctgacatcatccaggctaattctctcttc +tctttctatggtgatgatgaaattgtgagtacagacatacaattggacccagaaaaactgacagcaaagcta +aaggaatacgggctgaagccaactcgccctgataagactgagggacctctgattatttctgaggacctaaat +ggtttaaccttccttcggaggaccgtgacccgcgacccagctggttggtttggtaaattggaacagagttcg +atactcaggcagatgtactggaccaggggccccaaccatgaggacccttctgaaacaatgataccacattcc +caaaggcccatacaactgatgtccctgctgggtgaggctgcactgcatggcccagcgttctacagcaaaatc +agcaagctagtcatcacagagctaaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +aggtggatgaggttctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgtcggtgctgccattgcagcacctgtggcaggccaacaaaatataattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtgtcccctagaaatgctccagg +tgagatactatggagcgcgcccttgagccctgatttgaacccctatctttctcacctgtccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcagggaatgcgttcactgc---cgggaaaatcat +atttgcagcaattccaccaaattttccaactgaaggcttaagccctagccaggttacaatgttcccccacat +aattgtagatgtcaggcaattggaacctgtattaatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tctactctcaaattgatagcaatgttgtatacaccactcagagccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatattcct +ggtgccacccacagtcgagtcaagaactaagccattcactgtccctatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcccttagaaaagttgtatacgggtcctagcagtgcttttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttctaggcactactcagttgtcagctgtcaatatctgtaattt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggat------------------------------------------------ca---- +-------gccatg----------------------------------attacaca----------------- +----------------atgaatttggtgtcccaaaattggaataactatgatccaacagaggaaatccctgc +tcccctgggaacaccagactttgtgggtaagatccaaggtctgctcactcaaa------------------- +-----cc-----acaagagcagacggctcgact--------cgt-----------gcccacaaagccacagt +gagcactgggagcgttcacttcaccccaaagctgggtagtgtccaattcacca---------ccgacacaaa +caatgactt---tcaaactggccaaaatacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtgatca---ccaccagaatgaaccccaacaatgggtgctcccaaa +ttactcaggcacc-tctggt------cacaatgtgcatctggcccctgccgttgctcccactttccccggtg +agcagcttcttttctttaggtccaccatgcccg------ggtgcagcgggta------cccta--------- +--acatgaatttggattgcctgctcccacaggagtgggtgtcgcacttctatcaggaagcagccccagcaca +atcagatgtggccctgctgagatttgtgaatccagatacaggtagggttttgtttgagtgcaaactccataa +atcaggctacatcacagtggctcacactggtccgtatgatttggttattccccccaatggttatttcagatt +tgattcttgggtcaaccagttttacacacttgcccccatgggaaatggatcggggcgcaag---------cg +tgtgt---------tataatggctggatctttctttgctggattggcatctgatgttcttggttctggactt +ggttctctaatcaatgccgg---agccggagcgatcaatcaaagagtggaatttgaaaataataggaaatta +cagcaagcttccttccaatttagcagcaatttacaacaagcttcctttcaacatgacaaagaaatgcttcag +gctcaaattgatgctactcaaaaattgcagcagggcttaatgcagatcaagcaggcggtgcttctggaaggt +gggttttctgcggcagacgccgctcgtggggcaatcaacgcgcccatgacaaaaaccctggactggagtgga +actaggtactgggctcccgaggccagagtcacaacatacaatgcaggccatttctccccttcc--------- +ca---------------------gccttctaggacgcc---------------------------------g +tctggga----------------ggattagttctgtgacttc------------------------------ +------------------------------tgcatctgtgcgaaattccccc------------------ag +cttatctt-----------ctaaa------------tcttctactgctacaa-------------------- +----------ctgtgt-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggaaccagtgtctcgagcctcccgt------------------c +ggcttc---------------------------------------cagaaccaggagctgggttgaggacca +aaacaggagcgtgtcacccttcatga---ggggagcactcaacacatcatttgttactcctccatctagcag +atcctct---aacc------------------------------agagca---cagtctcaaccgtacccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgcat +acatccataagcgaggggagtcacg--------ggtttgaagt-----------gaaaagac---------- +---a-a-t-c-tg--------a-----t------ctttc----------t-tt-------------atttt- +-------a-------at---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305730.1/1-7495 |Norovirus GII isolate DS338 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------ctttggcagtcaa---aactctgtcaat +g------ac----agtattaacaccgccccttctgatagagaagaggt------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggcgccgtgcccaaaagcacc-------------aaaacgccc +agcagtga----------------tcaacaacgccccacagttaagatcgggcccaaaacattagtagtccc +acc-----------------------------tgaacccccaaatgg------agaagat------gttgtg +cagtttgatg----------caaagtcagaaactgtgagtgggttaccagatctgacaacggt---gcagaa +tgaacatgaaaacaccccatatacagttcccccactgagtgagagggaacacagaccagccgctgagccact +ccctggcacaatactagagatgtgggacggtgagttctaccactactccgtctatgtcagcggtggcaaagc +cctaggggtccacaaaccccctgcagccataagtctcgcaacaattgagctaacccccatatctctgtactg +gcggcctgtctacaccccca---actacttggtttgtccagacacattaaagggcctagctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgctggagctcaacgacacgtggct +ttg---cagaagatgcatctctagaaccaccggcttctttaaaccgtaccagacctggaacaggaagcctct +tccaactgtcgacgatgggaagattaaaaaggtggccaatgcaattctctgtgcgcttggctcactgttttc +aaaaccaatcaaagacctattgggcaagctcaaaccactgaatcttctgcatctgctcgcgtcatgtgattg +gacctttgcgggtatagtggagacggtcatcttaatggcggaactcttt---aacgtcttttggactccgcc +agatgtctccaatttcattgcctccctgataggtgactttgagttgcaggggcctgaggacttagctgtgga +gctcgtccctgtggttatgggtggtataggaatggttcttggtttcactgctgaaaagataggccgcatgtt +gtcatctgctgcatcaaccctccgggcgtgtaaagatctgggaaactacgccctcgacatactcaagctagt +catgaagtggttcttccccaagaaagaagaaaaagctgagatggagaccctaagagcgattgaggatgctgt +cctggacatggaggctataggaaacaaccatctcacaactctcctcaaagacaaggatagcctcacggcttt +catgaagaccctagacctagaagaggaaaaggcgaggaaactgtcaaccaaatcatcatcgcctgatatcgt +cggcaccattaatgccatactggccagaattgctgccgccagatccctcctacacaaggccaaagaagagat +gttcagcagaatcagaccagtggttgttatgatctcaggcagacctggcattggcaagacccacatggcaag +acatctggctaagagcatcgccaacaccatgagcggcgaccagagggtcggactcgttccgcgaaacggggt +agaccactgggatgcctacagaggggagagggtggtcttgtgggatgactatggcatgggcagccctgtcaa +agatgctttaacactacaagaattggccgacacttgcccagtcaccctaaattgtgacaggattgaaaacaa +ggggaagatgtttgacagtgacgtcattataatcacaaccaacttggtcaaccccgcacccctcgactatgt +gaactttgaggcgtg-ctccagaagagttgactttctggtctatgcagagtcaccagaaatcgaaaaggtca +agagggatttccctggtcagcctgacatgtggaaagaccacttcaaatcggacttctcccatataaaactaa +ctctagccccccagggtgggtttgataagaatggtaatactccgcatggcaagggcaccatgcgatctctaa +cccagggttccctaactgcaagggttgcaggattagttcatgagaggagagatgaattccaactccaaggaa +atgacctccaaacatacaattttgacaccaacagggtctctgcatttaggaaactggctgcagataacaagt +atggaatcatggagacaatgagagtgggtgcagcacttaagaatgtcaagactttggaagatctaaaagtcg +ctttgagagacgtgagattcaatgagtgtgaaatcatttacaggaactccaaatatcgagtctcttccaatg +gcaagggttcggtctctattgataaggttgaagaccatgcatcccagactgcaaatgaagtgagttcagcgc +ttctaaggctcaggcaagcaagggccagatactatgttagttgtttccaagaccttgtctacacgctcatac +aagttgccggggcgtcattcgttgtca---------------acagaa------tctccaagaggttttgct +gggaaaggtgggttaaaccaaccgagac-------------tcaagagacagttgagcccga-----gaagg +agactgctcaaggca---ggtgggagattgaacccaaggacgcagaaccagaaggcaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagccttctccagtaagggtctgagtgatgaagaatatgatgaataca +aaagaatcagagaagaaagaaatgggaagtactccattgaggaatacttacaggatcgggaccgctac---t +acgaagaagtggcagtcgcccgagcaacagaggaagacttctgtgaagaggaggaggccaagatcagacaga +gaatcttccgcccaacaaggaagcaaagaaaagaggaaaggggcgtgcttggcttggtcaccggctcagaca +ttaggaagagaagaccagatgacttccaaccaaaaggcaacttgtgggcagatgacactagaagtgtagatt +ataatgagagacttgactttgaggcccccccaagtgtttggtctagaatagtcccactgggcactggttggg +gtttttgggtctcat-ctaaccttctgattactactacacatgtcctgcccaagggactcaaagaactcttt +ggagttgaggttaaacaaattcaaattcacaaatctggtgagttctgcaggtttagattcccaagaccaatt +agaccagatgtcacagggctagtgttggaagaaggtgctccagagggcactgtctgctccatacttgtgaag +agacccacaggtgagatgattcccttggcagtgaggatgggcactcatgcatccatgaaaatccagggcagg +accgttggtggccaaatgggaatgcttctcacaggagcgaatgccaagaacatggaccttggtaccggccct +ggtgactgcggttgcccctacatttacaagcgcggcaatgacatagtcgttgcaggcgttcacaccgcagca +gcccggggaggcaatactgtcatctgtgccacccaagggcaagatggagaggcagttcttgaaggaaatgaa +aacctcggcacttactgcggtgccccaattctaggccctggcaaggcgcccaaactcagcacaaaaaccaaa +ttctggcgttcatcgccagacgccttaccacctggcacatatgagcctgcttacctaggaggcaaggacccc +agagtagagaaagggccctctctgcagcaggtcatgagagaccaactaaaaccttttacagagcctaggggc +aagccaccgagacctgcagtcctagaagaggctaagaagacagtgatgaatgttctggaacaaaccatcgac +cctgccaaaccatggacctactctcaggcatgtgcatcattggacaaaaccacctccagtggcagcccccac +catgtcaggaaaaacgaccactggaatggggagtctttcacaggtcctcttgcagatcaagcatccaaagcc +aatctcatgtatgagcaggccaagcatgtacagcccgtgtacacggccgcactcaaggatgagcttgttaag +actgataaaatctacaaaaagataaagaagagactcctatggggatcagatcttggcacgatggtcaggtgc +gccagggcttttggcggcctcatggatagcatgaaggcgagctgcatagcccttccatgtagggtgggaatg +aacatgaatgaggacggtcccatcatctttgacaagcactccaagtacaggtaccactatgatgctgactac +t-caaggtgggattcaactcaacaaagaagcatcctatctgctgctatggaggtgatgg-ttcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggatctcttggcacctagtcagctggatgttggcgatttt +gtcatctcagtccaggagggtctaccatcgggggttccgtgcacatcgcaatggaattcaatagcacactgg +atcctaaccttaagtgcaatggcagaagtgtcaggcctttcaccagatgttgtccaagcccactcctgtttt +tccttctatggtgatgatgagattgtcagcactgatatcaaccttgatcctgcaaaactgacacagaaactc +agggagtacggccttgttcccacccgacctgacaagactgaaggtccccttgtcataactgaggacctagcc +ggtctgacgttcctccgtaggtcaatagcacgagacccggctggatggtttggaaaactggaccaggactca +attctcagacagctgtactggacaagagggcccaaccatgagaacccatacgaaagcatggtcccccactct +caacgagctacacagctcatggccctccttggtgaagcctcattacatgggccccagttttacaagaaggtt +agcaaaatggtcattaatgagatcaaaagtggtggtctagaattttatgtgcccagacaagaggccatgttc +aggtggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgttgctggggcctctcttgcagcccctgtagtcggacaacagaatataattga +tccctggattaggaataattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaacttttacttgatctagaattgggtcctgaactgaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccgcctagtttcccctacgaaaatttgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtacttctgccaatgcctgatataagaaatgttttctaccatta +caaccagaacaacagc---cctaaacttaggcttgtagctatgctctatactcccctgagagctaacaactc +aggtgatgacgtgttcacggtgtcatgccgcgttttaacacgtccttctccagacttccagtttaccttcct +ggtcccacctacagttgaatctaaaactaaaaattttaccctccctgtcctcagagtctccgagatgacaaa +ttcaagg---tttcctgtcgttttggatcaaatgtacacgagcaggaatgaaaacatcattgtccaacccca +aaatggcaggtgcacgactgacggtgagctgctcggcactaccatcttgcagtctgtatctatttgtaattt +cagag-----------------------------------------ggactatgcaggcaaagt-------- +---------tgaatgaacaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaactacaacttaccaacttggatggctcacccatagatccaacagatgacatgcctgc +cccacttggcacaccagactttcaggctatgttgtatggcgttgcaagtcaac---gatcttccag------ +---------------aga-----caacgccact--------agg-----------gcacatgatgcacagat +tgacactgcgggtgatacattcgcccccaagattggccaggttcgttt---ca---------aatcaagctc +tgatgattt---tgacctacatgaccccacaa---------------------------aattcacgccca- +--------ttggtgtcaatgtgg---atgatc---------agcaccctttcagacagtggtccctaccaaa +ttacggtggccac-cttgcc------ctgaacaatcatttggcccccgctgtgacaccactcttccctggcg +agcagattttgttcttcaggtcatacattccaa------gtgctggaggcca------cacag--------- +--acggcgctatggactgcttgctaccccaagagtggatagagcacttctaccaggaggcagccccttccca +atctgacatcgcactggtgaggttcataaaccctgacacaggaagagtgctctttgaagctaaattgcacaa +acagggcttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttatttcaggtt +tgaagcttgggttaaccccttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gatcc---------aataatggcaggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcactcgtgggcgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacaggcag--- +------------------------------ctccaggaggcatcttttagacatgacaaggatatgctcaag +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcggtcagggcgcctatgacacagatccttgactggaatggc +tctaggtattgggcccccaactccatgaagacaacaggttactcaggcacatttgcttcccaaggcatca-a +aa-----------atcttccccacctgtc-------------ta---------------------------g +tcaagctc--------------caagtgctgctagacc---------------------------------- +-------------------------------------caccaaagcttcaccgtctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgctccctcgc----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------gcctaacaccgtgt---------ccacaaagac +ctccac-------------------act--------------gtcgaggacaagtgattgggtcagaggcca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttacgttacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcctatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-agggc------------------ttttcttt------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305731.1/1-7505 |Norovirus GII isolate DS332 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------accaccacccaacgg------cgatgatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtcggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaactaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagagcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcgtcagctgcatccacgcttaaggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaggcaatagaaaacaaccacatgaccactctcctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaagttgcatcaaccctgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggttctatgggatgactatggcatgagtaaccccataca +ggatgcactgaggcttcaagagttggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagactttttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttctggcttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgactgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +atggtatggtggacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgcccgaagcccaga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacagatac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaagatccgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaatgagagaatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgagggaggtgac +gacaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctaggtgggaaagatcca +cgtgtgaggggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcggcccgacaaaaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggagcaaagttcc +atcctcaggcagctatactggacaagaggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactactgggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccctaatttccctattgacaatctgagctcggcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaggttctgat---tcaagattacgtttgattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcactagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacatcaacccctaggctatt +caactattattggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccagggcaaggtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cttagaaat-----aatcactgaatc +tgatgactt---tgacacaaatcagccaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagaatttcagcaatggtccttacccaa +ctattctggtcag-tttact------cataatatgaacttagccccagctgtcgcccccaattttcctggtg +aacagctacttttcttccgatcacagctgccat------cctctggtgggcg------gtcta--------- +--acgggactctagactgcctggtcccccaggaatgggttcaacacttttaccaagaatcagcccccgccca +aacacaggtggccctggtcaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgctaaat +gcacaaattgaggcaacaaagaggctgcagactgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcaccaacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +aaatctcaatttggaaccatacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------gat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305732.1/1-7505 |Norovirus GII isolate DS331 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------accaccacccaacgg------cgatgatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtcggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaactaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagagcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccctgaagacctggccgtgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcgtcagctgcatccacgcttaaggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaggcaatagaaaacaaccacatgaccactctcctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaagttgcatcaaccctgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggttctatgggatgactatggcatgagtaaccccataca +ggatgcactgaggcttcaagagttggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagactttttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacaggccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttctggcttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgaccgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +acggtatggtggacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgcccgaagcccaga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacagatac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaagatccgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaatgagagaatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgagggaggtgac +gacaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctaggtgggaaagatcca +cgtgtgaggggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcggcccgacaaaaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggagcaaagttcc +atcctcaggcagctatactggacaagaggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactactgggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccctaatttccctattgacaatctgagctcggcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaggttctgat---tcaagattacgtttgattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcactagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacatcaacccctaggctatt +caactattattggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccagggcaaggtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cttagaaat-----aatcactgaatc +tgatgactt---tgacacaaatcagccaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagaatttcagcaatggtccttacccaa +ctattctggtcag-tttact------cataatatgaacttagccccagctgtcgcccccaattttcctggtg +aacagctacttttcttccgatcacagctgccat------cctctggtgggcg------gtcta--------- +--acgggactctagactgcctggtcccccaggaatgggttcaacacttttaccaagaatcagcccccgccca +aacacaggtggccctggtcaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgctaaat +gcacaaattgaggcaacaaagaggctgcagactgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcaccaacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactaaggactgggtcaatcaaca +aaatctcaatttggaaccatacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------gat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305733.1/1-7505 |Norovirus GII isolate DS330 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------accaccacccaacgg------cgatgatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgtgcccccacttagccaaagagaggtcggcgaagctaaggaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgggggcacat +acttggggtgcataaaccacctgctgcaataagcctcgccaaaattgaactaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagagcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaagctcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcgtcagctgcatccacgcttaaggcctgcaaagatctaggagcctatggattggagatacttaaattggt +catgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaggcaatagaaaacaaccacatgaccactctcctcaaggacaaagacagtctggccacata +catgaggactcttgacctggaggaagagaaagcaaggaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ttcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaagttgcatcaaccctgtcgggcgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggttctatgggatgactatggcatgagtaaccccataca +ggatgcactgaggcttcaagagttggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagactttttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccctggccaaccagatatgtggaaagatcactacagaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttctggcttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgaccgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +atggtatggtggacacactgagggtcggtaatcaactgaagagtgtcaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaatgcaacagtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttgctac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgcccgaagcccaga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggcaaatactcaatagaggagtacctccaagacagggacagatac---t +atgaagagcttgccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaagatccgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaatgagagaatagattttgaagcaccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggtttccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acgatgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgagggaggtgac +gacaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggcacctatgaaccagcatacctaggtgggaaagatcca +cgtgtgaggggtggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggacacccgcac +cacgttcggaagaatgattactggagtggtgaatccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggacgagctggtgaaa +actgacaaaatctatggtaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgaactcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtagctgaagatctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactctgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccactcggcccgacaaaaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgccgaacggtcacccgtgacccagcaggttggtttggaaagctggagcaaagttcc +atcctcaggcagctatactggacaagaggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactactgggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccctaatttccctattgacaatctgagctcggcacagatcacaatgtgcccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaggttctgat---tcaagattacgtttgattgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtctaa +ttccagg---tttccggtgccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcactagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacatcaacccctaggctatt +caactattattggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccagggcaaggtctttggcgtagccagccaga---gaaaccccgac----- +------------a------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctc-------cttagaaat-----aatcactgaatc +tgatgactt---tgacacaaatcagccaacaa---------------------------aattcaccccag- +--------ttggcattg---gagttgacaatg---------aggcagaatttcagcaatggtccttacccaa +ctattctggtcag-tttact------cataatatgaacttagccccagctgtcgcccccaattttcctggtg +aacagctacttttcttccgatcacagctgccat------cctctggtgggcg------gtcta--------- +--acgggactctagactgcctggtcccccaggaatgggttcaacacttttaccaagaatcagcccccgccca +aacacaggtggccctggtcaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgctaaat +gcacaaattgaggcaacaaagaggctgcagactgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccacctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcaccaacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaatcaaca +aaatctcaatttggaaccatacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------gat----ttag---aatctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MW305734.1/1-7499 |Norovirus GII isolate DS284 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------gttgctggcaa---------aaacatc +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttcaaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacagccg-cccccgggggaaacaaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------acccccacccaacgg------cgaggatgaacctaaggtg +gtgtacaggg----------tggg---agagggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaggcaggcgaagctaaagagccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctatacgttgagcggggacacat +acttggagtgcataaaccacctgctgcaataagcctcgccaaaatcgaattaacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagaacttgagtggagaatcatt +cccatatacggcctttgacaacaattgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtatcaagattggaatagaaaaccctt +gccaaccatggatgagccaaaaatcaagaaggtcgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacattattggaaaactcaaaccaatgaacatcctcaatatattagcaacttgtgactg +gacttttgcaggcatagtggaatccctaattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +actcgtacctgtggtgatgggaggggtaggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggggcctatggattggagatactcaaattagt +catgaagtggttcttccccaagaaagaagaggctaatgagttagccatggtaagggccatcgaggatgcagt +cttggacttggaggcaatagaaaacaaccacatgaccactcttctcaaggacaaagacagtctggccacata +catgaggactcttgacttggaggaagagaaagcaaggaaactgtccaccaaatctgcatcacctgacattgt +aggcacaataaatgcattattggcaaggattgcagccgctaggtcactagtccataaggctaaggaggagct +ttcaagcagacagaggcctgttgtcgtgatgatatcaggtagaccaggcataggaaagacccatctcgccag +agagctagccaagaaagttgcatcaacactgtcgggcgaccaaagaattggactggtgcctagaaacggtgt +agaccactgggatgcctacaagggggaaagagtagtgctatgggacgactatggcatgagcaaccccataca +ggatgcactgagacttcaagagttggccgatacctgtcctctaactctaaactgtgatagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaacccagcaccactggattatgt +caattttgaggcttg-ctccagacgcatagacttcttagtgtatgcagatgcacctgacattgagaaggcca +agcgcgacttccctggccaaccagatatgtggaaagatcattacagaccagacttcacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggtaacaccccacatggtaaaggtgtagtgaagtctctga +cgattgggtcattgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaactttcaatttcgaccgcaacaagatcgccgccttcaggcaattggcagctgaaaacaaat +atggtatggtagacacactgagggtcggtaatcaactgaaaagtgtcaagaccatggatgagcttaaacagg +ctataaagagtatcactatcaagaagtgccaaatagtgtacaatgggtgtacctacaccatggagtccgatg +gaagaggcagggtctcagttgacaaggtgcaaaatacaacagtccaaaccaataatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataaggtattatgtcaaatgtttccaggaagttgtctattctttgctac +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatctcaagcctctggt +cgaagccacctgttgaagagagtgatga--------acctgaagacaaagaagggtgccccaaacccaga-- +-gat----gaagatg---atctcaccatcgattccaaggacattaaagtggaaggaaagaagggcaagaaca +aatccggccgaggtaagaaacacacagccttctcagctaagggcctcagtgatgaagagtacgatgagtata +agagaatcagagaagaaaggaatggcaaatactcaatagaagagtacctccaagacagggacaggtac---t +atgaagaacttgccatcgctaaggccactgaagaggacttctgtgaagaagaggagatcaaaatccgtcaga +gaatcttccgccccaccaggaagcagcggaaagaggaaagggctacacttgggctcgtcacagggtcagaga +tcagaaagaggaatccagatgacttcaaaccaaaagggaaattgtgggctgatgataacaggagtgtggact +acaacgaaaggatagattttgaagcaccccccagcgtttggtcaagaatagtcaactttggcacaggttggg +gattctgggtttctc-ctagcctcttcataacctcaacacacgtgataccaaaaggaatcacggaggccttt +ggagtacccatgaaccaaatccaaattcataaatcaggggaattctgccgcttaaggtttccaaaaccaatc +aggccagacgtgagtgggatgatcttggaagagggtgcccccgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggaactgatgccacttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggtcagatgggcatgttgctcaccggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacatatacaagaggggcaatgacttcgtggtcattggcgtgcacactgcagca +gcacgtggagggaacacagtcatatgtgccacacaaggaagcgagggtgaagccactcttgaaggaggtgac +aacaaaggcacctattgtggagcccccattttgggaccaggcaatgcaccaaaattgagcacaaaaacgaaa +ttctggagatcttccaatgcaccgctaccgccaggcacctatgaaccagcgtacctgggtgggaaagaccca +cgtgtgaagggtggcccatccctacaacaggtcatgagggatcaacttaaaccttttacagaacccaggggg +aaaccgccaaacccaagtgtcctagaatcagcaaagaaaactatcatcaatgttctagaacaggtcatcgac +cccccccagaagtggtcttatgcccaagcttgtgcatctcttgacaaatcaacctccagtggacacccacac +cacgttcggaagaatgactactggagcggtgaatccttcacaggaaaacttgcagaccaggcatcaaaagca +aacctcatgtacgaggaaggcaaacacatgccgccagtttacaccgcagcgctcaaggacgagctggtgaag +actgacaaaatttatggtaaaatcaagaagaggctcctgtggggttctgacctcgccaccatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcaaattgtatcacacttcctatcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggattccacgcagcagcgggcagtgttggcagcagcactagaaatcatgg-tgaggttctctg +ctgaaccacagtt-agcacaaatagttgctgaagatctgctggcaccaagcgtggttgatgtgggtgacttc +aaaatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacaatggaactccattgcccactgg +ttgcttactctatgtgccctttctgaagtgacaggactaggccctgacatcatacaagccaattccatgtac +tctttttatggtgatgatgagattgtaagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtatggcctcaaacccactcgccccgacaaaactgaagggccgctggtggtcagtgaagacctgaat +gggttgacgttcctccgccgaacagtcacccgtgacccagcaggttggttcggaaagctggatcaaagttcc +atcctcaggcagctatactggacaagaggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +caaagacccgtgcagctcatggcactgctgggagagtcctccctacatggaccctcattttacagcaaggtt +agcaagctagtcatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctacgggcctcgtcccagagatcaacaacga +gacccttcccctagaaccagtggctggtgcggctattgctgcagctgtcactggtcaaaataatataattga +tccctggattagaacaaattttgtacaagcacctaacggggaattcaccgtttcacctaggaattccccagg +agagattcttctaaatttggaattaggtcctgatctaaatccttatttggcacacctatccagaatgtacaa +tggctatgctggtggagtggaagttcaggttctcctggcggggaacgcgttcactgc---tggaaagatcct +cttcgctgctgtgccaccaaatttcccagttgaatttctgagtcctgctcaaattactatgctcccacactt +gatagttgatgttagaactcttgaaccaatcatgatacccctccccgatgtgagaaacaccttcttccacta +caacaaccggccttct---gagcgcatgcgcttggtagccatgctgtacacacctctgaggtccaatggttc +aggtgatgatgttttcacagtttcatgtagagtgctgactagacctaccccagattttgagtttacttattt +agttccaccttcagtagaatctaaaacaaaacctttctctctccctatactgactatttctgaattaactaa +ctcaaga---ttcccagcacctattgattcattgttcactgctcaaaacaatgtcctcaatgtccaatgtca +gaatggccgatgcacactggatggtgaactacaggggaccactcaactgctcccaactggcatatgctcctt +tagag-----------------------------------------gaaagataacagcaa----------- +-----------atgtggagg------------g---------------------------------ca---- +-------gccacg----------------------------------atgaca------------------- +--------agtggcatatgagtttgacaaacctcaatggaaccccatttgacccaacggaggatgtcccagc +cccactaggtacccctgacttcacaggtctcctctttggagtcgcaagccaaa---ggaacgtcggt----- +------------gggacagccaacaacaccacc--------agg-----------gcacatgaggctgtgat +atcaacaaccagcacacaatttgtgccaaaattaggttctgtcaactttggg------------agtgagag +tccggattt---ccagattggccagccaacca---------------------------gatttacaccag- +--------ttggaatca---aaattgaagatg---------ggcatccttttgaacaatggaagttaccaaa +ctatgctggagca-ctgacc------ctcaacatgaaccttgccccacccattgctcccaatttcccaggtg +agcagttgcttttcttcagatcaaatgttcctt------gtgctggtggtat------cagtg--------- +--acggtgtcattgactgtctgctacctcaggagtggatacagcatttctaccaagaatctgccccgtccca +atcagacgtggcgctgatcagatatgtcaaccctgacacgggccgcactctctttgaggcgaagcttcacag +gactggctacatcactgttgcccacactggtgattatccccttgttgtcccctccaatggctacttcagatt +tgattcttgggtaaatcaattttactcacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------agtaatggcaggagccttcatagcaggtcttgcaggtgacatgctcaccaacgctgtt +ggctctctggcgaacgccgg---agcaaatgccataactcaaaagatagattttgaaaacaacaaacaa--- +------------------------------ctgcagacagcctccttccaacatgacaaggacatgctccgc +gcgcaagtggatgcaaccaaacaactgcaatcagagatgatcgccatcaggcagggggttttgaccgcgggc +ggcttttcccctactgatgcagcgagaggggctgtgggagcacccatgactaaagttcttgattggtctggc +acccgttactgggcaccaaattctaccaaaacaacaagctattcggggcaattcacatcaaca--------- +cc--------------tgtgcacacaccaaatttgagt---------------------------------a +gc----a----------------aacccaaacccacaaacgttaa--------------------------- +------------------------------aacccaacccctttcttcttcttctggt------------ag +t--gttta-----------tagtc------------tt-------tcaactcagtcaactacactg---t-- +----------ccggac-----cttcttca---ggttcatctgtttcctctgcttcaacacaatcaacaaaat +taagttc--------------------------------------agtttctt------------------c +tatgaa---------------------------------------tagaacagctgattgggtcaatcaaca +aag---aagccttagcccttacatga---gtggagctctcaacatctctcatgtaacacctccatcaagcag +ggcttct---agtt------------------------------cgggaa---cagtctcgactgtacccaa +agaagttttgga-ctcctggacatctgcat------------ttaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tgattt---ttaa---------------------------------------ttaggctt- +-----aaaa----tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW305735.1/1-7515 |Norovirus GII isolate SSM nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaacaacaccgccccttctagtaaggaagaggc------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggaca-------------aaagcaccc +agcagtga----------------tcaacactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaacgg------tgaagac------accgtg +cagtttgatg----------cgaggtcagaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacatgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactcgagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggtccacaagccccctgcagcgataagcctcgcaacgatagagctcacacccatatctctctattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggcctcgctggtgagaagtt +cccctatacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctttgcgcgcttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaacttgctacacttgctcgcatcatgtgactg +gacgtttgcaggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttctggacaccgcc +agatgtttccagcttcatagcctctctgataggtgattttgaactgcaaggacctgaggaccttgctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaggctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaagacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagggtgggactcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttctgtgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtgactctaaactgtgataggattgagaacaa +agggaagatgtttgacagtgatgtcatcataattacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagaatcaccagaaatcgagaaggtta +agagagacttccccggccaacctgacatgtggaaagaccattttaagcaagacttttcccacataaagctga +ctctagccccacagggtggatttgacaagaacggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagttccagctccagggga +acgacctccaaacatacaactttgacaccaacagggtctctgcgtttaggaagctggccgcagacaacaagt +acgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttagaagacctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggcgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagttgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctccaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aggtggcccaaggca---gatgggagattgagccaaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagccttctccagtaaaggcctgagtgatgaggagtatgacgagttta +agagaattagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaaggccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgattttgaggctcccccgagtgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-caaaccttctgatcacaacgacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcaaattcataagtccggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaagatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcaaagaacatggaccttggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatctgtgccactcaagggctagatggggaagcagtccttgagggaaatgaa +aaccatggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagtacgaagaccaag +ttctggcgctcatcaccagatgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggagaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacccagacctgcagttttagaagaagccaaaaagacagtaatgaatgttttagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacctctagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgagctagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgcagggtaggaatg +aacatgaatgaggatggacccatcatatttgacaaacattctaagtataggtatcactatgatgctgactat +t-ccagatgggactcaacccaacaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcgcaagtggttgcagaggacctcctggcacccagccaattagatgttggcgatttc +gtcatctcagtccaggagggtctaccatcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtatcgggtctttcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgcaggtcgattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtcccccactcc +caacgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctaaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgataacattagtgcagctcaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagttcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtattcacggtgtcttgcagagttctgacccgccctgctcccgactttgagttcacgtttct +ggtgccaccaactgtggagtcaaagactaagccctttacacttcccattctgactcttggggagctgtccaa +ctccaga---ttccccgctccaatagacatgctgtatactgaccctaatgaggcaattgtggtgcaaccaca +aaatggtaggtgcactctagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgatccaacagatgaggtgccggc +agttttgggtgccatagatttcaaaggaaccgtatttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccccagatacaccccaaagttaggctctgtgttgat---gt---------attctgagtc +tgctgattt---tgatgatggacagcctaccc---------------------------gcttcaacccca- +--------ttggaatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcat-cttact------cttaacatgaacttggctcccgcagttgcccctgccttccctggtg +agcgcattctcttcttcagatcagtggtaccat------ccgctggtggcta------tggat--------- +--caggtcacatagattgcctcattccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggctacttcaggtt +cgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtgttggccactaaacagctccagcaagagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcaagaggtgctgtaaatgcaccgatgacaaaaattttggattggaatggg +actaggtactttgctccaaacagtatgaagacaaccagttactcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactctaacc---cgttctgaatc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcaactactactccttcac----------------- +---------------------aatcaaccca---ttcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggaccagcgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctcttcaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccatagacagcctctcttcgctc +atgttcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305736.1/1-7525 |Norovirus GII isolate Bethesda20181111 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagtaccc +agcagtga----------------tcagcaccgtccaacagttaagattggacccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactataattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacaggccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactccgtgtacgtcagcggcggcaaagc +tctgggggttcataaacctccggcggctataagcctcgcgacgatagagctcacccccatatccctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggactcgctggcgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +tccaaccgttgatgatggaaagatcaaaaaggtggccaatgcgatcctttgtgcgctcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacctactacatctgcttgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcagaacttttc---aatgtcttttggaccccgcc +agacgtctctaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcagtaga +gctcgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggccgcatgct +gtcatccgctgcatcaacactgcgggcgtgcaaagacttaggaaattatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagacatggaggccataggtaacaaccacctcacgactctactcaaggataaagatagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcgccggatatcgt +cggcaccatcaatgccatactggctaggatagctgctgctagatccctcctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcatcggcaaaacccatatggctag +acacttggctaagaacatcgccaacaccatgagtggtgaccagagagttgggcttgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcaccctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacaaccaacctagtcaaccctgcacctctcgactatgt +gaacttcgaggcgtg-ctctagaagaatcgatttcttggtctatgcagagtcaccagaaattgagaaagtta +aaagagatttccccggccaacctgacatgtggaaagactatttcaaacaagacttttcccacataaagctaa +ctctagccccccaaggcggatttgacaagaatggtaacaccccgcatggcaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggtctcgttcatgaaaggaaggatgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcggcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtaaagttcaatgagtgtgaaataatttacaggagctctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtcccagaccgcaaatgaagtgggctcagcac +tcctcagactcaggcaagcaagggctagatattatgtcagctgcttccaagaccttgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaagattctgtt +gggaaagatgggttaaaccaaccgaaac-------------ccaagaagtgagtgaacccga-----aaagg +aagtggctcaaggta---gatgggagatagagcccaaggacacggaaccagagggtaagaagggcaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaagggcctaagtgatgaagaatatgatgagttca +agagaatcagagaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtagcagttgcccgagcaacagaagaggacttctgtgaagaagaagaagccaagataagacaaa +ggatcttccgcccaacgaggaagcaaagaaaggaggaaaggggggttcttggcttagtcactggttcagaca +tcaggaaaaggagaccagatgatttccagccaaaaggaaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcaccggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacatgtcctgcccaagggggtcaaagaactcttt +ggggtcgaaatcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgctggaggaaggtgctcctgagggtactgtctgttccatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggcggtcagatgggaatgctcctcacaggggcaaatgcaaagaacatggatcttgggaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgatatagttgtcgcgggtgtccacaccgcagca +gcccgagggggcaatactgtcatctgtgccactcaaggacaagatggagaggcagtccttgagggaaacgag +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagcacgaagaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctgggaggtaaggatccc +agagttgaaaaggggccctccttacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaagaaaacagtaatgaacgtcctggaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcgctggacaagaccacttctagtggaagcccccac +catgtcaggaagaatgatcactggaatggggagtcttttaccggtcccctagcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtatacggccgcactcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatggtcaggtgt +gccagggcttttggcggccttatggacagtatgaaggcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccccatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-taaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacaaaaactc +agggagtatggtctggtccccacccggcctgataagaccgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggaccaagactca +atcctcaggcaattgtactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcctcactgcatggtccacagttttacaagagagtc +agcaagatggtcattagtgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacagtga +ggttatggcacttgaaccggtagtgggagcgtcaattgcagctcctgttgtcggccagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgctcctgaatcttgaattgggcccagaacttaacccctatttaagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacatttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccctgacataaggaacaggttcttccatta +caatcaggaaaacaca---ccccgaatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgcagagttctaactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttaccctaccaattctaacccttggtgagctgtcaaa +ttcccgt---tttcctgctgctatagacatgctttacactgatcccaatgaatcaatagttgtacagcccca +aaatggtaggtgcacccttgatggtacgttgcagggcacaacacaattagtcccaacacagatttgtgcttt +tagag-----------------------------------------gcactctgatcagccag--------- +----------aatgcgagagca------gc----------------------------cgattcagtag--- +--actccccccag--------agagtccgtg----------------accacccg----------------- +----------ttgcatgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggccattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctgggac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgctcctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatca---------------------------ggtttactccgg- +--------tgggtatgggtgaca---------------------acaattggagacagtgggagttgcctga +ctactctggcaga-ttgact------ctgaatatgaaccttgcccctgctgtttctccatccttccctggtg +agcgaatccttttctttaggtctatagtaccat------cagccggaggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtatgtcaaccctgacactgggcgcaacatctttgaggctaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttatttcagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtatcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcagggggtgttgaccgctggc +ggcttttcccccgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactagactggaatggc +acaagatactgggcacctaatagcatgaagaccacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtt----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaagacttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-----ttcc---t-cccccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW305737.1/1-7556 |Norovirus GII isolate HenrytonSP24, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcccaaaagcacc-------------aaggcaccc +agcggtga----------------ccagcactgccccactgttaagattgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggac------gttgtg +cagtttgatg----------caaaatcggaaactgtacgtgggctacccgacctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacagtccctccactgagtgaaagggagcatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgaattctatcactactccatttatgtcagcggaggcaaagc +cctgggagtacacaaacccccagcagctataagcctcgcgacaatagaactcacccccatatccctttactg +gcggcctgtctacactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccttatacggccttcagtaacaactgctacaacttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggagaagtatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgctcgcgtcgtgtgactg +gacatttgcaggtatagtagagacggtcatcttaatggcggaactcttc---aacgtcttttggaccccgcc +agatgtctccaactttatagcctccctgataggtgattttgagctacaagggcctgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgctgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaaactagt +catgaagtggttcttcccaaagaaggaagagaaggccgagatggagaccttaagggcgatcgaggacgccgt +tttagacatggaggcaatagggaacaaccatctcacgacactcctcaaggataaggatagcctcactgcatt +catgaagactttagacctagaagaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggcaccattaatgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggcaggcctggcattggtaaaacccatatggcgag +gcatctggctaagaatatagccaacaccatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggagagagggtagtcctatgggacgactacggtatggggaaccctgtcaa +agatgccttaacattacaagagctggccgacacctgcccagttaccctgaattgtgataggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattatgt +aaacttcgaggcttg-ctccagaagaatcgatttcctcgtttatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaaactga +ctttagccccccagggcgggtttgataagaatggtaacaccccacatggtaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggacttgttcatgagaggagagatgagttccagctgcaagggg +acaacctacaaacatacaactttgacaccaacagggtctctgcgtttaggaaactggccgcagataataagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaactccaagtaccgagtctcatccaatg +gcaaaggcacagtctctgttcacaaagtcgaggacctcacttctcaaaccgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcgagggccagatactacgtcagctgtttccaggaccttgtctacactctcatac +aggttgctggggcttcattcgtcgtca---------------acagga------tctctaagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------ccaggaggcgagtgagcccga-----aaagg +agactgcccagggtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaaggggcaagaagcacacagccttctccagtaaaggtctgagtgacgaagagtatgatgaattca +aaaggattagagaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatcttccgcccaacaaagaagcagagaaaagaggaaaggggggtgcttggcctggtcactggttcggaca +tcagaaagaggaggccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaatgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgtcctgcctaagggtattaaggaactcttt +ggagtcgatgtcaagcaaattcaaatccacaaatctggagaattttgcaggttcagattcccaaggccaatc +aggccagacgtctcagggctcgtgttagaagaaggtgcaccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatctatgaaaattcagggtagg +actgttggcggccaaatgggaatgcttctcacaggagcgaacgcaaagaacatggaccttggcaccggccca +ggcgattgcggttgtccatacatctacaaacgcggtaatgatataattgtggcaggtgttcacaccgcagca +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggatggagaagcagtccttgagggaaatgag +aatcttggtacgtactgcggtgccccaattttaggtcctggcaaggcgcccaagctaagcactaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctaggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagagaccaactgaaacccttcgcggaacccaggggt +aaaccaccaagacccgcagtcctagaagaggctaaaaagacagtgatgaacgtcctggaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgcgcctccttggataagaccacttccagtggtagtccccac +cacattaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagaccaagcttctaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcacttaaagatgagctcgtcaag +actgacaaaatctataaaaagataaagaagaggctcctttgggggtcagaccttggcacaatggttagatgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagggtgggaatg +aacatgaatgaggacggacccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactat +t-ctaggtgggattcaactcaacaaagaagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcacctagccaactagatgttggcgacttt +gtcatctctgttcaggaaggcttaccgtcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagacgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaattgacacagaaactc +agggagtatggtttggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggaccctgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgaaagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcacgggccccagttttacaagaaggtc +agcaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaactcgcctgg +tgagatgctcttaaaccttgagttgggcccagagcttaacccctatctaagtcatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccccgtagaaaatatcagtgcagcccagataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgacataaggaacagattcttccatta +caatcaggagaacacc---ccccggatgagacttgtagctatgctttacacacctctgagagc---caactc +tggtgaggatgtgtttactgtatcttgcagggttttgactcgtcctgctccagattttgagttcactttctt +ggtgccaccaactgttgaatcaaagactaagccttttacactgcctatattaactcttggtgaattgtccaa +ttctagg---ttcccagccccaatagatatgttatacactgacccaaatgaggggattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcagggtaccacacaattagtccccacccagatatgtgcttt +caggg-----------------------------------------gcacgctaattggccaa--------- +----------acctcaagatct------tc----------------------------agactcaactg--- +--attcagctccc--------cgaagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaatcttgatggcacgcagtatgacccaactgatgaggtgccagc +ggtccttggtgccattgatttcaagggggccgtctttggagtagccagccaga---gggatgtttcagggac +-----tc---aagtgggg---------gcaact--------cgt-----------gctcatgaagtgcacat +caacacaacagatcccaggtatacaccaaaactgggatccattctcat---gc---------actcggagtc +ggacgactt---tgtgactgggcagccaatcc---------------------------aattcacacccg- +--------tgggaatgggtgata---------------------acgactggcaccagtgggagttgcccga +ttactctggacac-ctaacc------ctgaatatgaatcttgccccagcagtcgcgcctgccttcccaggtg +agaggatccttttctttagatcaatagtcccat------ctgccggcggcta------tgggt--------- +--ctggacaaatagattgtctcataccacaggagtgggtccagcatttctatcaggaagctgcaccatccca +gtctgctgtggctctcatcaggtatgtcaaccctgacacgggcagaaacatctttgaggcaaaattgcacag +ggaaggcttcatcactgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +aaacc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctcttattaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataagcag--- +------------------------------cttcaaatggcatcatttaagcatgataaggagatgttgcaa +tcacaagtgttggcaaccaaacaattgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgtcaacgctccattgacaaagattctggactggaatggc +actagatattgggcaccaaatagtatgaaaaccacaagctactcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttctcagcacactgctct---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagctctccttctactatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctc-------cagg--------aa +ctgggtc----t---tccag-------------------gtccacctccacgt---------ccacagcaac +ctccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaaccacctttgtcacaccaccatcgagcag +ggcctca---tcaa------------------------------atggca---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-ttttctct---t---tccttt +t------------ctct-----cttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>MW305738.1/1-7528 |Norovirus GII isolate JW2015 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggtacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctctctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccaaatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccattgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaaactcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagagcccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaaaaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaacgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagtgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacatttctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agttgtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaattatgacccaacagaagaaatcccagc +tcctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgcaccaaagctgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcatctggcccccgctgtagcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctagaactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tctttc +t-tt---a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MW305739.1/1-7509 |Norovirus GII isolate HK28 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttccaa---agaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaagcacc-------------aaggcaccc +agcgatga----------------ccagcactgccccacagttaagatcgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggat------gttgtg +cagtttgacg----------caaaatcggaaactgtacgtgggctacccgatctgacgacagt---gcaaaa +tgaacatgagaacaccccatacacagtccctccactgagtgaaagggaacatagaccagccgctgagccgct +ccctggcacaatactggagatgtgggatggtgaattttaccactactccatctatgtcagcggaggcaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacaatagaactcactcccatatccctttactg +gcggcctgtctatactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccctacacggccttcagtaacaactgctacaatttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggaggagcatttccagaaccactggcttctttaagccataccagtcttggaacaggaagcctct +ccctaccgttgatgatggaaaaattaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgcttgcgtcgtgtgactg +gacgtttgcgggtatagtagagacagtcatcttgatggcggaactcttc---aacgtcttctggactccgcc +agatgtctccaactttatagcctccctgataggtgattttgagttacaagggcccgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaagctggt +catgaagtggttcttcccaaagaaagaagagaaggccgagatggagaccttaagggcgatcgaggatgccgt +cttagatatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagcctcactgcatt +catgaagaccctagacctagaagaggagaaagcaagaaggctgtcaacgaagtcatcctcgccagacattgt +cggcaccattaacgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtggttgtcatgatctcaggcagacctggcattggtaaaacccatatggcaag +gcatctggctaagagtatagccaacactatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggggagagggtggtcctgtgggacgactatggtatggggaaccctatcaa +agatgccttaacattgcaagaactggccgacacctgcccagtcaccctgaattgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcatcataatcacaactaatttggtcaaccctgcacccctcgattatgt +gaacttcgaggcttg-ctccagaagaatcgatttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaagttga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaagggcaccatgcggtctctga +cccaggggtccctgactgcaagagttgcaggccttgttcacgagaggagagatgaattccagctgcaagggg +acaacctacaaacatacaactttgacaccaatagggtctctgcgtttaggaaactagccgcagataacaagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtttcatccaatg +gcaaaggcacagtctctgttgacaaagtcgaggacctcacttcccaaactgcaaacgaggtgagctcagccc +tccttaggctcagacaagcgagggccagatactacgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagga------tctcccagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------tcaggagacgagtgagcccga-----aaagg +aaactgcccagggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaagaggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgaattca +aaaggatcagggaagaaagaaatggaaggtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtagcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggctaaaataaggcaaa +gaatctttcgcccaacaaggaagcagagaaaagaggaaaggggggtgcttggcctggttactggttcggaca +tcagaaagaggagaccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaacgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccattaggcaccggttggg +gcttttgggtctcat-ccaacctcctgattacaacaacgcatgtcctgcctaagggcattaaggaactcttt +ggcgtcgacgtcaaacagatccaaatccacaaatctggagaattttgcaggtttagattcccaagaccaatc +aggccagacgtctcagggctcgtgttggaagagggtgcaccagaaggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccccctggcggtgaggatgggcacgcatgcatctatgaaaattcagggcagg +actgttggtggccaaatggggatgcttctcacaggggcgaatgcaaagaacatggaccttggcaccggccca +ggggattgcggttgcccatacatttacaagcgcggtaatgacataatcgtggcaggtgtccacaccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagtccttgaaggaaatgag +agtcttggcacgtactgcggtgccccaatcttaggtcctggcaaggcgcccaagctcagcacaaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctgggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagggaccagctgaaacccttcacggaacccaggggt +aaaccaccaagacccgcagtcctggaagaggctaaaaagacagtgatgaacgtcctggaacaaaccatcgat +cctgctaaaccatggacctactcacaagcatgtgcttccttggataagaccacttccagtggcagtccccac +cacattaggaaaaatgaccattggaatggagagtcttttacaggccccctcgcagaccaagcatctaaagct +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcactcaaagatgagctcgtcaaa +actgacaaaatctacaaaaagataaagaagaggctcctatgggggtcggaccttggtacaatggttagatgc +gccagggcctttggtggtctcatggacagcatgaaagcaagttgtatagccctcccgtgcagagtgggaatg +aacatgaatgaggacgggcccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactac +t-ctaggtgggattcaactcaacaaagaagcatcttgaccgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggacctcctggcacctagccaactggacgttggcgacttt +gtcatctcagttcaggaaggtttaccgtcaggagttccatgcacgtcacaatggaattcaatagcccactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagatgttgtacaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacattaaccttgacccttcaaaacttacacagaaactc +agggagtatggtctggtccccacccgacccgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacattcctgcgcaggtcaatcgcacgggaccctgccgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgagaatccatatgaaagtatggtcccccactcc +cagcgggccacacagctcatggcccttctcggtgaggcctcattgcacgggccccagttctacaagaaggtc +agtaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcgcctgg +tgagatgcttctaaatcttgaattaggcccagagctcaacccttatctgagtcatctatcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaatatcagtgcagcccaaatcaccatgtgcccccatgt +gattgttgatgtaaggcagcttgagccagtgcttttgcccctccctgacataaggaacagattcttccatta +taatcaggaaaacacc---cctcgaatgagacttgtggctatgttgtatacaccccttagagc---aaactc +tggtgaggatgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaactgtggagtcaaagactaagccttttacactccctattttgactcttggagagctatccaa +ttccaga---ttccccgctccaatagacatgctgtacacagatcccaatgagacaattgtggtacaaccaca +aaatggcagatgcaccctagatggaacactccaagggactacccagctggtgcccacccaaatttgctcctt +taggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agagtcaacag--- +--attcagctcca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagttgaagaaccttgatgggacaccatatgatccaacagatgaggtaccagc +agttctgggtgccatagatttcaaaggaactgtgtttggagttgctagccaga---gaaacaccacagggag +-----ct---ctgcagga---------gcgacc--------cgt-----------gctcatgaggtgcacat +agataccacaaaccccagatacaccccaaaacttggttctgtgttgat---gt---------attctgagtc +tactgattt---tgatgatggacaacccaccc---------------------------gtttcaccccta- +--------ttggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattccggtcac-ctcact------cttaatatgaacctggcccccgcagtcgcccctgctttccccggtg +agcgcatcctcttctttaggtcggtggtgccat------ctgctggtggtta------tgggt--------- +--caggccagatagactgcctcatcccacaggaatgggttcagcacttctatcaggaggccgccccatcaca +atctgcggtggctcttattagatatgttaatcctgacactgggagaaacatctttgaggcaaagctgcatag +ggaaggattcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttatttcaggtt +cgaggcctgggtcaatcaattttatacactcacccccatgggaactggacaggggcgtaga---------ag +agttc---------aataatggcaggagctttctttgctgggttggcaggtgacgccataacaaatggtgtc +gggtccctgatcagtgctgg---ggccaatgcaattaaccagaaagtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgttgcag +tcacaagttctggccactaaacagctccagcaggaaatgatgaacataaggcaaggggttttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtgaacgcgccgatgacaaaaattttggattggaatggc +acaagatactttgctccaaacagtatgaagacaaccagttattcggg-ccagttttctagtaaccctgtaca +ta-----------ggcaacctactttgtcccgtt---ctgaccc---------------------------c +ccaa-------------------aagttaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctattgccccttcac----------------- +---------------------aatcaaccca---ttcaacggttctgactg-------cagg--------gt +ctgggtc----a---tccag-------------------gacaacctcttcgt---------ccacagcagc +ttccac-------------------cct--------------atctaggactagcgactgggtaaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +atgtgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------cc-ttcttctt---t---tccttt +t------------cttt-----ct------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ312111.1/1-7544 |Norovirus GII isolate CIQ1878, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtaacaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggacttaagaaaa----tgctgggtgctgcccctaaggggacc-------------aaagcaccc +aatagtga----------------gcagcactgccccatagttaagatcgggaccagaacactagcggttcc +ccc-----------------------------cgagcccccaaatgg------tgaagac------accgtg +cagttcgacg----------cgaagtcggaaactgtgcgtgggttaccagacttaacaacggt---gcaaaa +tgaacacgagaacacaccatacactgtccccccattgagtgaaagggaacatagaccagccactgagccgct +tcctggaacaatactagagatgtgggatggtgaattttaccactattctgtgtacgtcagcggcggcaaagc +cctaggggttcacaagcccccagcagcaataagcctcgcgacgatagagctcacccctatatccctttactg +gagacccgtttacaccccca---actacctggtctgtccagacacgctgaagggccttgctggtgagaagtt +cccctatacagccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---tagaagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaacaggaaacccct +tccaactgttgatgatggaaagatcaaaaaggtggctaatgcaatcctctgtgcccttggatcactgttttc +aaaaccaatcaaagacctgctgggcaagcttaaaccactgaacttgctgcacctgctcgcatcatgcgactg +gacgtttgcaggtatagtggagacagttatcctaatggcagagcttttc---aacatcttttggacaccgcc +agatgtctcaaacttcatagcctccctgataggtgattttgaattgcaaggtcccgaggacttggctgtgga +gcttgttcccgtggtcatgggtggcataggaatggtcctcggcttcactgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaggacctgggaaactatgcacttgacatactcaagctggt +catgaagtggttcttcccaaagaaagaggagaaagccgagatggaaaccctgagggcaattgaggatgccgt +cctggacatggaagccatagggaacaaccacctcacaaccctcctcaaggacaaggatagcctcacagcttt +tatgaagactctagacttggaggaggagaaggcgaggaaactgtctaccaaatcgtcctcgccagacatcgt +cggcactatcaatgccatactggccaggatagctgctgccaggtccctcctacacaaggccaaagaagaaat +gttcagcaggatcagaccagtggtcgttatgatctcaggcaagcctggtattggtaaaactcatatggcaag +acacttggctaagagcatcgccaacaccatgagtggtgatcagagagttggactcgttccgcgcaatggggt +cgaccactgggacgcctacaggggagagagggtggtcttgtgggatgactatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacatgcccagttaccctaaactgtgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaatctagtcaacccggcgccccttgattatgt +gaacttcgaggcgtg-ttccagaagggttgactttttagtctatgcagagtcaccagaaattgagaaggtta +aaagggatttccctggccaacctgatatgtggaaggaccattttaaaccggatttctcccatataaagctta +ctctagccccccaaggcggatttgacaagaatggcaacaccccgcatggcaagggcaccatgcgctccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagatgagttccagctccaaggga +acgaccttcaaacatacaactttgacaccaacagagtctccgcatttaggaaactggccgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcggcacttaagaatgtcaagactttggaagatctgaaagtcg +ccctgagggatgtgaagttcaatgaatgtgaaataatttacaagagcttcaaatatcgcgtctcttccaacg +gtaaaggctctgtctctgttgacaaggttgagaaccaagcatctcaaactgcaaatgaggtaggctcagcac +ttcttagactcaggcaggcaagggccagatactatataagctgctttcaagaccttgtttacactctaatac +aggttgccggagcgtcattcgttgtta---------------acagaa------tctccaagaggttctgtt +gggagagatgggtcaggccaaccgagac-------------ccaggaaacgagtgactccga-----aaaag +aagtagcccagggta---gatgggagatcgaacccaaggacacagagccagagggcaagaagggcaagaaca +agaagggaagaggtaagaaacacacagcattctccagcaagggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatgggaaatactccattgaggaatacctacaggaccgagaccgctat---t +atgaggaggtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatcttccgccctactaagaaacagagaaaggaagagaggggggtgcttggactggtcactggttcagaca +ttaggaagaggagaccagacgatttccaaccaaagggtaacctgtgggctgatgacaccaggagtgtggatt +acaacgagagacttgattttgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggatggg +gcttctgggtctcgt-ctaaccttctgatcacgacgacacatgtcctgcctaaagggattaaggaacttttt +ggggttgaaaccaaacagatccaaattcataagtctggagagttctgcaggttcagattcccaagaccaatc +aggccagatgtcacggggctcgtgttggaggaaggtgccccggaaggcactgtttgctccatactcgttaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgctccttacaggggccaacgcaaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccctacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggtaacactgttatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgaa +aaccttggcacttactgcggtgccccaattttgggtcctggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacctgggaggtaaggaccca +agagtagagaaagggccatccctgcagcaagtcatgagagatcaactaaaacctttcacagaacccaggggc +aagccgcccaggcctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacagaccatcgac +cctgccaagccatggacttattcccaagcatgtgcctcactagacaagaccacctccagtggtagcccccat +catgtcaggaaaaatgaccattggaacggagagtcctttactggcccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggccaaacacgtgcagcccgtgtacacggccgcgctcaaggatgagcttgtcaag +accgacaagatctataaaaagataaagaaaaggctcttatgggggtcagaccttggcacgatgatcaggtgc +gccagggcctttggcggcctcatggatagcatgaaggcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactctaagtacaggtaccactatgatgcagactat +t-ccaggtgggattcaacccaacaaaggagcgttctcgcagccgctatggaagtaatgg-tgcgattttccg +ccgaaccagaact-ggcacaagtggtcgcagaggatcttctggctcccagtcaactggatgttggcgatttt +gtcatctcagtccaagagggtctgccatcaggagtcccatgcacatcacaatggaactcaatagcacactgg +atcctaactttgagtgctatggcagaagtgtcgggtctatcaccagacgtcgtccaagcccactcttgtttc +tcattttatggcgacgatgagatcgtcagcactgatatcaaccttgaccccatgaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggtcccctcgtaataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atccttaggcagctatactggacaaggggccccaaccatgagaacccatacgagagcatggtccctcattct +cagcgggccacacagctcatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcagctccatcgag---tgatggcgcagccggcctcgtcccagagatcaatcatga +ggttatggcaatagagcccgtcgcaggcgcatcaatcgctgctcctgtggtgggacaacaaaatattattga +tccctggataagaaataattttgtacaggcacctgctggagaatttaccgtttcccctaggaatgccccagg +tgagttcttgcttgatttagaactgggccctgatttgaatccctatctggcacatttggcaagaatgtacaa +cgggcatgcgggtggtatggaagtgcaaatagtactagctgggaatgcgttcacagc---tggtaaaatcct +gtttgccgtcataccgcctggattcccgtatgaaaatttgtccccatcacaactcacgatgtgcccccacgt +cgtggttgatgtaaggcaacttgagcctgtcatgttgcccatgccagacattaggaatacattctttcatta +taatcaagatggtggg---ccaaaattgaggctgattgctatgctgtacacccctctaagagctaataattc +aggtgatgatgtgttcactgtttcctgtagggttctaacaagacctgcccctgattttgaattcacattttt +agtccctccctctgttgagtcaaagactaaggcatttaccatcccagtgcttaaaatttctgaaatgataaa +ctcaaga---ttccctgtaccagttgaccaaatgtacaccagcaggagtgaaggaatcgtggttcagcctca +aaacggtagggccacaattgacggagagttacttggcaccactctcgtctctccagtctctgtgtgtaattt +caagg-----------------------------------------gaaacttgcagactcag--------- +----------gtcccaaa------tga-ac------------------------------------------ +-----------------------------------------------accagctt----------------- +----------taccaactgcagctgactaacctcgatggttcacccattgaccccactgatgacacacctgg +gccactgggttgtccagacttcactggtctcctctatggggttgccagccagc---gtggtccaggtga--- +--------------------------tgctacg--------cgg-----------gcccatgaggcacggat +tgacaccggcaacagcacttatgctcctaaaattggtcaggtcaggtt---ct---------actcaacttc +aaataattt---tgagataaatcaacccacac---------------------------acttcaccccag- +--------tagggatctatattgagggtaatt---------cttctgattttaatcaatggcagctccccag +gtatgggggtcat-ctagct------aacaacaaccatttggcacccgctgtttctcccctctttcctggag +agcaaattcttttctttagatcattcatcccag------gagccagtggcca------cacaa--------- +--atggagagatggattgtctcctgccacaggagtttgtgcagcacttctaccaggaagcggcaactgcaca +gtcagaagtggccttgctgaggtttgtcaaccctgacactggaagggttttgtttgagtctaaactccataa +gcaaggattcatgacaattgcaagttcaggtgaccaccctattatcatgccaactaatggttattttagatt +tgaagcttgggttaatcaattttattctcttgcccctgtgggaactggaagtgggcgtaga---------ag +aatcc---------aataatggctggagcttttatagcaggattggctggggacgttctgtcctctggcgtt +ggttcgctggtgaacgcggg---ttccaatgctatcaaccaaaatgttgaatataatttcaacaggcag--- +------------------------------ctccaggaagcatctttcaaacatgataaggaaatgctcaat +gcccaaattgctgcgacaacgcagctgcaaaaagacataatagcaataaagcagggggttttgtccgctggc +ggcttctccccaactgatgccgcgagaggttcagtgggggccccaatgaccaagattttggattggaatgga +tcaagatattgggctccaaattcaatgaggaccacaggttactctgg-caacttcact----tcccagggtg +tt-----------aggcaagtgtttcaacctg-ctcaaggcact---------------------------c +ccaac-----------------ccaagcaccttgaga----------------------------------- +----------------------------------------------------------------------aa +tgctcccaaggctccctcttcagtg-----aattcttttagtacccaatctaccc----------------- +---------------------aatcaacaaa---attgagtggctccacaa-------cagg--------aa +cc--------------------------------------tctattccctcat---------ccaga---ac +cactac-------------------act--------------ttcaagaaccagtgagtgggtgagagggca +gaatgagagacttagccctttcatga---gtggcgcgctacaaacaaccttcgtgacgccaccatcaagcaa +gtcttct---tctg------------------------------taggga---cagtctcgaccgtccctaa +ggaggttttgga-ctcctggacgcctgtct------------ttaacacacgcaggcagccactcttcgccc +acgttcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagaatg-------- +-------att-tgaa--------------------tttgatt------ct-ttgtttta---t---tcttgt +c------------tttc-----ttctaaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a----------------------------------------------------------------------- +- +>MW981327.1/1-7554 |Norovirus GII isolate Hu/HY-1/19/CHN, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtattttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactacctgaactcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggagtccttaatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactagaaattttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcaat +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaacaaaatctgcttcacccgatattgt +gggcacgatcaactcccttctggcaagaatcgctgctgcacgctccctagtacatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctcccttatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaagcagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctgagatgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaactcatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgagccagcctacctcggtggcaaggaccct +agagttaaaggtggcccttcactacaacaagttatgagggaccagctgaagccattcacagaacccaggggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaactatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaactggctgaccaagcctccaaggcc +aacctaatgttcgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatacagatatcactatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatttgtcccctgacattatccaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctaaaaccaactcgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatggagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgaggccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaaccgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggagcaattacgacccaacagaagagattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggctttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cccaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgc-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtgggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MZ292759.1/1-7490 |Norovirus GII isolate Hu/US/2011/GII.7[P7]/CA-RGDS-1132 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaataatgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaggttggattcaagaaaa----tgctgggtgccgtacccaagggtacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggttgccagacttaacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcatagaccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttacaacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggctttttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaacctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaagacctggctgtgga +gctcgtccccgtggttatgggcggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcatccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaagaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaataaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +tggcacgatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgtgatgatctcaggcagaccaggcattggaaagacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgatcagagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagggacttccctggccagcctgacatgtggaaagaccactttaagccagacttctcccacatcaagctga +ccctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaatg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccaggtattatatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttttgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgattccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaggaaaggaacggaaagtattccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgttcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgactttgaagcgcccccgagtgtctggtcaagaatagtcccattaggcaccggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaagcaaatccaagttcacaagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +actgttggtggccagatggggatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccgattctgggtcctggcaaggcgcctaaactcagcacaaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacttaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctaggcctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcctctaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccccattatatttgataaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatttcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaagctc +agggagtatggtctggtccccacccggcctgataaaactgaaggtcccctagtcataactgaaaacctcact +ggcctgacgttcctccgtaggtcgattgcccgggacccagctggttggtttggaaagctggaccaagactcg +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttacttgatttggagttgggaccagaattgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccccccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgtcctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaataatttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattacccatcctcaaaatatcggagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgaaaaccaagttgtccagccaca +gaatggtagggtcacactcgatggcgaactattgggcaccacacccttgttggctgtcaacatctgcaaatt +taagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggccccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--taggttacatggactgccttgtcccacaagaatgggtccagcacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctacaacaagagatgattgacataaagcaaggggtgctgacagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgtagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---aatg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-ag----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ292794.1/1-7494 |Norovirus GII isolate Hu/US/2014/GII.8[P8]/CA-RGDS-1133 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctggcaacttt---aacattgccaac +a------ac----agtgaaaacactccccctcccgttaaggaagaggc------gagtgtcctatccaacgt +aaaagttggattcaagaaaa----tattgggggctgtgcctaagcagccc-------------aagccacc- +agaagtgaaaa------------ccaaagatcaacccagggtgttggtcaatggtaaggccctggaggtgcc +gcc-----------------------------tccaccaccaaatgg------tgaagac------gtggtt +tactataaca----------gcaaggacgacactgtgcacggtctaccaaatctaacaacagt---cagctg +tgaaggtgaaaaccttccgtacacagttcctcctctcagcgagagagagcacagggcagcaccagaaccatt +acctggcaccatactagagatgtgggatggtgaattctaccattatgcgatatatgtctctggtggtaaggc +cataggggtgcacaaacccccagctgcaatcagccttgctaccatcgagcttacacctatatcgctttactg +gaggcctgtttatgtcccca---attacttggtccaccctgacacactcaagagcttagctggcgaaaaatt +tccatacaccgcatttagcaataattgttacaatttctgttgctgggttcttgacttgaaagactcgtggct +taa---ccgcagatcaataactagaacaactggtttcttcaagccttatcaatcctggaacaagaaaccact +tccgacggtggatgatggaaaaatcaagaaagtcgccaatgcagtcctgtgtgcccttggttcactattctc +aaaacctattaaggacttgatcgggaagctgaagccattgaatttcttgaatctcctcgcttcgtgcgactg +gaccttctccggagtggttgagactgtcatacta---gctgaactattt---ggtgtgttttggaccccccc +cgacgtgtcgaacttcatcgcgtcactcatcggggacttcgagctgcagggtccagaggatttagctgtgga +gttagtgccaattatcatgggcggcatcgggatggtgctgggattcaccgccgagaagattggtcgaatgct +atcatcagctgcatcgacccttagggcctgtagagacctaggtaactacgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaggaggaaaaggcagagatggagaccttgagggccatagaggatgctgt +cttagatatggaggcaattggaaataatcacctcactgctctgttgaaagacagggacagcctcctaaccta +catgaagactctagacctcgaagaggaaaaggcgagaaagttatccacaaaatcatcttcccctgacatcgt +gggtaccatcaatgccatattagccagaattgccgcggctaggtctctcctgcacagagccaaagaggaaat +gtacagcagacctaggcctgtcgtggtgatgatatcaggaagaccaggggttggtaaaacccatatggctag +acacctcgccaagagtgtggcgagcaccatgagcggtgaccaaagggtgggccttatcccccgcaatggagt +tgatcactgggatgcctacaggggagaacgagttgtcttgtgggacgactacggcatgggtaacccagtgaa +ggatgcccttgctctgcaagaactagcggacacttgtccagtcaccctcaattgtgacaggatagagaataa +gggaaagatgtttgacagcgaggtaataattataacaactaatctggccaaccctgccccgcttgattatgt +caactttgaggcttg-ttcccgcagaattgacttcctcgtctacgcagaagccccaaccattgagaaggcga +agaaggattttcccgggcaaccagacatgtggaaggagcacttcaaagcagatttctctcatctcaaactca +cactggccccgcaaggcggttttgacaagaacggcaacacaccacatgggaaggggactatgaagaccttaa +cacagggttcccttacagcaagagtggctgggcttgtgcacgagaggaaagacgagttccagttacagggtg +gggagttgcaggtctacaactttgacacaaacaaggtatcggctttcaggaagcttgctgcagacaacaact +atggatttctggagacaatgggagtcggctcctcactcaaggacgtcaagacagtggaagatcttaaatgtg +cccttagaagtgtcagtttcaaagaatgtgaagtaatctacaggaatgtcaagtaccgcatatcatcagacg +gttgcggtaaggtcagcatagagaaactggcagataacaactcccaaacaaccagagaaattatcacggccg +tcactagactacgacaggctcgtgctaggtactacatcagttgtttccaagacctagtctacacactcctgc +aggttgccggagcctcatttgtcatta---------------atagaa------tagttaagaagttcaact +gggaacgatgggtcaaggctccagaaacagatgaacccacaccaagtaatga-caagcccgac--------- +-----actgaagagg---aatgggagatcgcccccaaagatgtggactctgagggtaaaaaggggaagaaca +agaagggcaggggacgtaagcacactgcattctccagcaaagggcttagtgatgaggagtatgatgagttca +aaagactaagggaagagaaacagggccgctacacaatagaggagtacctccaggacagagaccggtac---t +atgaagagctagcagtggcccgggccactgaagagaacttttgtgaagaggaagagataaagatcaggcaaa +gaatattccgccccaccaaaaagcagaggaaggaggagcgcggggttctgggactcgtcacaggagcagaca +tcaggaaacggagacccgatgacttccaaccaaaaggaaaattgtgggcagatgattctaggagcgtcgact +acaatgagaagatcgagtttgaagctcctcctagcgtctggtcaagaatcgtcccgcttgggactggttggg +gattctgggtctcat-ccaacttactaattaccaccacacacgtgctgcccaaaggcatcaaagagcttttt +ggggtggacatcaaacaagtccaagttcacaaatcaggtgaattttgcaggttcaggttcccaaaaccagtg +aggccagatgtctctgggttggtactagaagaaggggcccccgaaggcacagtgtgctctgttctcatcaag +aggtcaacaggagagatgatcccccttgcagttaggatgggcacccacgcctctatgaagatccaggggcgc +actgttggcggccagatgggcatgctgctcactggagccaacgctaagaacatggatttgggtaccggcccc +ggggattgtggttgcccgtacatatacaagaggggcaatgacatcgtggtggccggcgtccacacagcagca +gcgcgcgggggcaacacggtcatctgcgcaacccaaggacctgatggtgaggcagtgttggaagggggagag +gaccacggtacttactgtggagccccaatactggcccctggtaaagcgccgaagcttagcacaaagactaag +ttttggcgctcatcccctgattcccttccccctgggacgtatgaaccagcttaccttgggggcaaggacccc +cgtgtggagaaagggccgtcactccaacaagtgatgcgagaccaactcaaacccttcacagaacccaggggc +aagccacccaggccgtcagtgctggaggaagccaagaagacagtcatgaatgtactggagcagaccatagaa +ccagctaagccatggacctattctcaagcctgtgcttcattggataaaacaacatccagtggcagtcctcac +cacatcagaaagaatgaacactggaacggggagtcttttactgggcctcttgcagatcaagcctcaaaagcc +aacctgatgtatgaggagggtaaacatatggaccctatgtacacagcagccctcaaggacgagctggtgaaa +actgacaaaatctataagaaaatcaagaagaggttgttgtgggggtctgatctggggacaatggtgaggtgt +gctcgagcgtttggaggattgctcgacagcatgaaagagagttgcatctccttgccttgcagggttggcatg +aatataaatgaagatggaccactcatatttgaaaaacattccaaatacacctatcattatgatgctgattac +t-ctaggtgggactcaacacagcagagggctgtcctgggtgcagccatggaggtaatgg-tgaagttctccg +ctgagccggaact-ggctcaggtggttgccgaagacctccttgcgcccagccgtcttgacgtgggtgacttc +gtcatctccgttcaagaaggtcttccatcgggtgtcccctgcacgtcacagtggaactcaatcgctcactgg +atcctgactctcagtgctatgtctgaggtctctggtctttcccctgaggttgtgcaagccaactcctgtttc +tcattctatggggatgatgagatagtcagcacagatataaacctggacccagaaaaactcaccaggaaattg +agggaatatggtctcgtcccaacaaggccagacaaaactgagggcccacttgtgatcactcaggatttgaat +ggtctcacatttttgaggcgaaccatagtgcgggaccccgcaggttggtttggaaaattggaccgtgattcc +attctaaggcagttatactggaccagaggacccaatcatgagaacccctttgaaagcatgattccccactcc +cagagagcaacccagttaatggcccttcttggggaagcctcgttgcatggtccccagttttacaagaaggtg +agtaaaatggtcatcaatgagatcaagagtggtggtctggagttttacgtgcccagacaggaggccatgttc +agatggatgagattttcagacctcagcacgtgggagggcgatcgcaatctggctcccgagaatgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggcgcggctggcctcgtaccagagatcaaccatga +ggtcatggccatagagcctgttgcaggagcctctttagcagcccctgtcgtaggacaacttaatataattga +tccctggattagaaataattttgtacaagcccctgctggagaattcactgtttcgcctagaaatgctccagg +tgaatttttgttagatctagagttaggcccagaattgaatccttatcttgctcacctttcacgcatgtataa +tgggcatgcaggtggtatggaggtgcagatagtgcttgctgggaatgcgttcacagc---gggcaaaatact +gtttgcagtcataccacctggattcccctatgaaaatttgtcacctgcacaattgaccatgtgcccgcacgt +agtggtggatgtgatgcagcttgaaccaatcttgctgcccatgccagacatccgtaatacattcttccatta +caatcagagcaatggg---ccaaaactcagattagtagctatgctttacacacccctaagggctaacaatgc +tggtgatgatgtcttcacagtttcctgcagggttctgactcgtccatcaccagattttgaattcaattttct +tgtccccccatctgttgaatctaagactaaagttttcactcttccaattcttaaaatatctgagatgacaaa +ttcaaga---tttcccataccagttgaccagatgtatactagtaggaatgaaaatatagttgttcaaccaca +gaatggcagggtgacacttgatggagagttacagggcacaaccacactccaaccggtgtccatttgcggctt +ccgag-----------------------------------------ggacgctgcagaccagg--------- +-----------------------cta--gc----------------------------agatcaaccaa--- +--attacaca-------------------------------------------------------------- +----------taccaagtgcaccttgagaatttggacggctcacccgtcgatccgacagatgaagtcccagc +ccccctggggacgccagattttcaggcccagctatttggagttatcagccaaa---ggagtagtga------ +-----------------------caatgccacc--------agg-----------gcacatgaggccagggt +caacaccaacgatcctaccttcgcgccccagattgcccaggtgcgttt---ca---------aatcaccatc +ccacgactt---ctttgacaatgaacccatta---------------------------agttcacaccag- +--------ttggagttagtgttg---atagcg---------aaaacagctacaaccaatggctccttcccag +gtatggtgggcac-ctgaca------aacaacacccacctggccccctctgtgtccccaatgttccccggcg +agcagattctctttttccgctcgttcatgccag------gcgccagtggtca------cactg--------- +--atggtgctattgactgccttttaccacaagagtgggttgcccacttctaccaggaggccgcaactgcgca +aacagacgtggctctgattagatttgtgaaccccgacacaggcagagtgttatttgaagggaagctacacaa +gcagggttttataaccatctccaacagtggggaccaccccattgttatgcctgctaatggatacttcaggtt +tgaggcatgggtcaatcaattttactctctcgcccccgtgggaactggaagtgggcgtaga---------ag +gattc---------aataatggctggagcttttcttgcaggtctggctggtgatgtggtgacctctggcatc +gggtcgctcatcaatgcagg---tgctaatgcagtgaaccaaaagattgaatatgacttcaataggcaa--- +------------------------------cttcaagaagcttcttttaaacatgacaaggagatgttgaat +gctcaaattaatgccacaaccaaattgcagagggacatgattgccatcaagcagggggttttgaccgctggc +ggcttttcccccactgatgctgcaaggggttccatcaatgctccaaccaccaaaattcttgactggaatgga +tctaggtactgggcgccaggatcaatgagaacaacagcatactctggcaatttcatatcacagggagttaag +ca-----------gcccacacccattgtta--gatctgtgaaac---------------------------c +tcaagt-----------------acagcaatct--------------------------------------- +----------------------------------------------------------------------cc +tgcccctt-----------cttctgttta---ttctgtaggttctgttagatcac----------------- +---------------------aatcaacacg---atcaactcaattgacag----ggtcagg--------ga +ctgtatc--------------------------------aggggcacccaccc---------cctcaacaac +cacaac-------------------act--------------gtccagaacaagtgagtgggtgaggagcca +gaatgataggctgagcccctttatgg---gaggcgcacttcagacagcttttatcacgcccccatcgagtaa +ggcttcatcctcat------------------------------caggaa---cagtctcaaccattcctag +agaaattttgga-ctcctggactcctgcat------------ttaacacacgcaggcagccgctcttcgctc +acatacgtaagcgaggggagtcacg--------ggcttag--t-----------gaaaagaatg-------- +-------att-tggttag-----------------attat-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ279713.1/1-7504 |Norovirus GII isolate Hu/US/2013/GII.17[P31]/CA-RGDS-1125 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctctctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacggccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcctatagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggatgaaattaacacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcggccatcagccgtgccaaagtcgagctgacaccactctctctgttctg +gagacctgtatacacacccc---agtatctcatctccccagacactctcaggagactacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttatgcaccttgtcttcactattcac +caggcccattaaggacataataggaaagctgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggagattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatctactttgagagcctgtaaagaccttggtgcatacggactggaaattttaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgccgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +tgaccattgggacgcatacaagggtgaaagagtagtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcagattgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caacttcgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagctccggaggtggaaagggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatagcccgagcatcagggttactccatgagagactagatgaatatgaactgcaaggtc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaatgtcgcgatcaggaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gtaagggtagtgtgaaaattgacaaagtgcaaagtgctgctgtgcaaactaacaatgaaatagccggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gaa----gatgaag---agtttgttgtttcatccgacgacatcaaaactgagggcaagaaagggaagaata +aatctggtcgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaagagtacctacaggacagagacaagtac---t +atgaggaggtggctattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcattaag +agaccaactggagaactcatgcctctggcagccagaatgggaacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggccataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacatactgcggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattacaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgctaagaaaaccatcatcaacgttcttgagcaaacaattgac +ccacctcaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaattcaaggcacactgtgtcacccttcctgtcagagttggtatg +aacatgaacgaagatggccccatcatctttgagaaacactccagatataaatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaggtagttgcagaagacctcctctcccctagtgtaatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agtaaattggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatttatctagaatgtataa +tgggtatgctggtggcgtagaagttcaagtcctccttgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgtcaggaacaccttctttcacta +caataatcaacctgcc---aatcgcatgcgattggtagccatgttgtatacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagtttacatactt +ggtccccccttcggtagagtctaagactaaacccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtggattcattgttcacagcccaaaacaataatcttaatgttcaatgtca +aaatggtcgctgcacattagatggtgagttgcagggaaccactcagttgcaaccatcaggcatctgcgcctt +cagag-----------------------------------------gcaaaataacggcagatgtac----- +----gtccaaaccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcat----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgacccaacagaggatgtaccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tt-----caacctcacccaaacactacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gcacaag +tgatgattt---cactgtgggccagcccacaa---------------------------aattcacaccag- +--------ttggcatc---aagattgaggatgggc---------atgcatttgatcaatggaccctacccag +gtattcaggccat-ttaact------ctcaatatgaatcttgccccacctgttgctccaaatttccctggtg +aacaactactcttctttaggtcaaatgtcccct------gtgccggcggcat------tagtg--------- +--atggtatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggctacatcactgttgcccattcaggtgattatccccttgttgtcccctccaatggatactttagatt +tgattcttgggtgaaccaattttattcacttgcccccatgggaactgggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcactggcgaacgccgg---ggccaatgccatcactcaaaagatagactttgaaaacaacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgagatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccccactgatgcggcgagaggagcagtgggtgcacccatgaccaaagtcctcgactggtctggt +actcgttactgggctccaaactccacgaggacaacaggttactcagggcagtttacatcagca--------- +ccagtgcatatgcccacaaaaacaattcagcctgctcc---------------------------------t +gttaaaa----------------ggactcaacctctttcttcctcttcag---------------------- +---------------gt--agtatctatagtctttcaacacagagcactgtcttgaccaagccttcttcagg +ctcttctt-----------ctgtt------------tcttctgcttctacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaat--------- +---c-a-a-t-tagttt---taa---tt------aaa----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ279714.1/1-7504 |Norovirus GII isolate Hu/US/2013/GII.17[P31]/CA-RGDS-1124 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctctctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacggccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcctatagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggatgaaattaacacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggatcgaggtcttat +acttggtgtgcataagccaccggcggccatcagccgtgccaaagtcgagctgacaccactctctctgttctg +gagacctgtatacacacccc---agtatctcatctccccagacactctcaggagactacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttatgcaccttgtcttcactattcac +caggcccattaaggacataataggaaagctgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggagattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatctactttgagagcctgtaaagaccttggtgcatacggactggaaattttaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgccgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +tgaccattgggacgcatacaagggtgaaagagtagtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcagattgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caacttcgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagctccggaggtggaaagggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatagcccgagcatcagggttactccatgagagactagatgaatatgaactgcaaggtc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaatgtcgcgatcaggaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gtaagggtagtgtgaaaattgacaaagtgcaaagtgctgctgtgcaaactaacaatgaaatagccggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gaa----gatgaag---agtttgttgcttcatccgacgacatcaaaactgagggcaagaaagggaagaata +aatctggtcgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaagagtacctacagggcagagacaagtac---t +atgaggaggtggctattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcattaag +agaccaactggagaactcatgcctctggcagccagaatgggaacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggccataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacatactgcggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattacaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgctaagaaaaccatcatcaacgttcttgagcaaacaattgac +ccacctcaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaattcaaggcacactgtgtcacccttcctgtcagagttggtatg +aacatgaacgaagatggccccatcatctttgagaaacactccagatataaatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaggtagttgcagaagacctcctctcccctagtgtaatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agtaaattggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatttatctagaatgtataa +tgggtatgctggtggcgtagaagttcaagtcctccttgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgtcaggaacaccttctttcacta +caataatcaacctgcc---aatcgcatgcgattggtagccatgttgtatacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagtttacatactt +ggtccccccttcggtagagtctaagactaaacccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtggattcattgttcacagcccaaaacaataatcttaatgttcaatgtca +aaatggtcgctgcacattagatggtgagttgcagggaaccactcagttgcaaccatcaggcatctgcgcctt +cagag-----------------------------------------gcaaaataacggcagatgcac----- +----gtccaaaccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcat----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgacccaacagaggatgtaccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tt-----caacctcacccaaacactacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gcacaag +tgatgattt---cactgtgggccagtccacaa---------------------------aattcacaccag- +--------ttggcatc---aagattgaggatgggc---------atgcatttgatcaatggaccctacccag +gtattcaggccat-ttaact------ctcaatatgaatcttgccccacctgttgctccaaatttccctggtg +aacaactactcttctttaggtcaaatgtcccct------gtgccggcggcat------tagtg--------- +--atggtatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggctacatcactgttgcccattcaggtgattatccccttgttgtcccctccaatgggtactttagatt +tgattcttgggtgaaccaattttattcacttgcccccatgggaactgggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcactggcgaacgccgg---ggccaatgccatcactcaaaagatagactttgaaaacaacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgagatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccccactgatgcggcgagaggagcagtgggtgcacccatgaccaaagtcctcgactggtctggt +actcgttactgggctccaaactccacgaggacaacaggttactcagggcagtttacatcagca--------- +ccagtgcatatgcccacaaaaacaattcagcctgctcc---------------------------------t +gttaaaa----------------ggactcaacctctttcttcctcttcag---------------------- +---------------gt--agtatctatagtctttcaacacagagcactgtcttgaccaagccttcttcagg +ctcttctt-----------ctgtt------------tcttctgcttctacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacgcagacagcctctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaat--------- +---c-a-a-t-tagttt---taa---tt------aaa----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ279715.1/1-7500 |Norovirus GII isolate Hu/US/2013/GII.17[P31]/CA-RGDS-1126 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctctctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacggccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcctatagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggatgaaattaacacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacaaggtcttat +acttggtgtgcataagccaccggcggccatcagccgtgccaaagtcgagctgacaccactctctctgttctg +gagacctgtatacacacccc---agtatctcatctccccagacactctcaggagactacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttatgcaccttgtcttcactattcac +caggcccattaaggacataataggaaagctgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggagattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatctactttgagagcctgtaaagaccttggtgcatacggactggaaattttaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgccgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +tgaccattgggacgcatacaagggtgaaagagtagtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcagattgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caacttcgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagctccggaggtggaaagggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatagcccgagcatcagggttactccatgagagactagatgaatatgaactgcaaggtc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaatgtcgcgatcaggaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gtaagggtagtgtgaaaattgacaaagtgcaaagtgctgctgtgcaaactaacaatgaaatagccggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gaa----gatgaag---agtttgttgtttcatccgacgacatcaaaactgagggcaagaaagggaagaata +aatctggtcgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaagagtacctacaggacagagacaagtac---t +atgaggaggtggctattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtccctatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcattaag +agaccaactggagaactcatgcctctggcagccagaatgggaacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggccataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacatactgcggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattacaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgctaagaaaaccatcatcaacgttcttgagcaaacaattgac +ccacctcaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaattcaaggcacactgtgtcacccttcctgtcagagttggtatg +aacatgaacgaagatggccccatcatctttgagaaacactccagatataaatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaggtagttgcagaagacctcctctcccctagtgtaatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agtaaattggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatttatctagaatgtataa +tgggtatgctggtggcgtagaagttcaagtcctccttgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgtcaggaacaccttctttcacta +caataatcaacctgcc---aatcgcatgcgattggtagccatgttgtatacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagtttacatactt +ggtccccccttcggtagagtctaagactaaacccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtggattcattgttcacagcccaaaacaataatcttaatgttcaatgtca +aaatggtcgctgcacattagatggtgagttgcagggaaccactcagttgcaaccatcaggcatctgcgcctt +cagag-----------------------------------------gcaaaataacggcagatgtac----- +----gtccaaaccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcat----------------- +----------------atgcaactgacaaatctcaatggaacccccttcgacccaacagaggatgtaccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tt-----caacctcacccaaacactacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gcacaag +tgatgattt---cactgtgggccagcccacaa---------------------------aattcacaccag- +--------ttggcatc---aagattgaggatgggc---------atgcatttgatcaatggaccctacccag +gtattcaggccat-ttaact------ctcaatatgaatcttgccccacctgttgctccaaatttccctggtg +aacaactactcttctttaggtcaaatgtcccct------gtgccggcggcat------tagtg--------- +--atggtatcatcgactgcctgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +atctgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggctacatcactgttgcccattcaggtgattatccccttgttgtcccctccaatggatactttagatt +tgattcttgggtgaaccaattttattcacttgcccccatgggaactgggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcactggcgaacgccgg---ggccaatgccatcactcaaaagatagactttgaaaacaacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgagatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccccactgatgcggcgagaggagcagtgggtgcacccatgaccaaagtcctcgactggtctggt +actcgttactgggctccaaactccacgaggacaacaggttactcagggcagtttacatcagca--------- +ccagtgcatatgcccacaaaaacaattcagcctgctcc---------------------------------t +gttaaaa----------------ggactcaacctctttcttcctcttcag---------------------- +---------------gt--agtatctatagtctttcaacacagagcactgtcttgaccaagccttcttcagg +ctcttctt-----------ctgtt------------tcttctgcttctacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaat--------- +---c-a-a-t-tagttt---taa---t--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ291623.1/1-7495 |Norovirus GII isolate Hu/US/2015/GII.17[P17]/CA-RGDS-1127 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +atgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaagaattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acataccaaacctctggt +cgaagccacccatcgaggggggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagacg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agggcaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctatctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggtaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacgcctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatacgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ291626.1/1-7529 |Norovirus GII isolate Hu/US/2011/GII.2[P16]/CA-RGDS-1130 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----cccttggggcccggcccaaacagtct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gctgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgataacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggaatctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +agaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgcccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagacatgtggaaggacgcatttaagtcggacttttctcatatcaagttgc +aacttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggacgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaaccaattaaaaggggtgaaaactatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaagatcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagatgtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagaaagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgcggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtatatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatggtccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagagcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggacttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattagtcataactgaactcaaggaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgcaatgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaatttgaatgggtccccctttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatgt---tatagtcaaccaaccactca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--accccgccattgattgcctattaccacaggagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgtgcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggctgacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caaga------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MZ291631.1/1-7556 |Norovirus GII isolate Hu/US/2015/GII.17[P17]/CA-RGDS-1128, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +atgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaagaattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acataccaaacctctggt +cgaagccacccatcgaggggggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagacg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agggcaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggtaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacgcctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatacgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MZ291632.1/1-7552 |Norovirus GII isolate Hu/US/2015/GII.17[P17]/CA-RGDS-1129 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaac---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cggggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctacaccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggagtcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacggggcgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MZ291634.1/1-7546 |Norovirus GII isolate Hu/US/2010/GII.4 Den Haag[P4 Den Haag]/CA1131 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccagggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctaaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagtacctccgttcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcgccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggtaaaaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactacttatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctaacaggatccaacgccaaaagcatggatctaggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccacttccacctggcacctatgaaccagcctaccttggtggtaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtcttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccagatacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcttgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaagggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccactcagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttggta---------ctgacacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------gatttaccccag- +--------tcggtgtcattcaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccaggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggcttataccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaggattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagtagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaactgatgaaagtcaaacaggcaatactcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tatccccgcccggggctcccca------------------ag +catatctt-----------ccaat------------gtttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctgtcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ268406.1/1-7515 |Norovirus GII isolate Hu/US/2013/GII.5[P40]/CA-RGDS-1117 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggcaataccagcacaaacagt +gtaattcac----aaccaagatgtaaactctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggagcgagaccaaaacaacccgctcccagggttccttccccca +acagggagggaagacacgaaactactcctagagctccccctccaaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggagaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcactcccctctccctatactg +gagaacagtctacactccac---cttatctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggctttttac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccgccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgtt +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgcttaattgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacaccataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacggaaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagtcgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagccgacaacaagt +atgggtttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctgaaagacataagtatcatgccttgcagaatagtctacaactcaatggcttacgatctcgattcgaacg +gaacagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaactccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------agtggaggccattgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagttcaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggacagggatcggtat---t +atgaagaattggccatagccaaggcaacggaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtagtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgagaattcaaggaaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaatgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccacccagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaagggaggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccgacgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaacgacaactggaacggagagtccttcaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-tcaggttttcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactaatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaattaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctwcyccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcgctggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtctcccctagaaattcccctgg +agagatattggtcaatttggagctaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgttagaagtacccttttccattt +taatcaaaaggatgaa---cctaagatgagactcgttgccatgctctacacccctcttcgttccaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgataggcacaacccaactacaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggttcc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctgaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgtaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aggcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aatttaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +atttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgatttcaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaattaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacagattccactcaatcaact---------gttg +ttagtacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctatatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ268407.1/1-7450 |Norovirus GII isolate Hu/US/2013/GII.13[P16]/CA-RGDS-1120 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattgaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcgaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgaggaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacatgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccggctccacttgactatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccagaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaactatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgttgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcgttt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaacgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgaactggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggacttactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +gtttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaggctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgaccttccctggtg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtacgtcaaccctgatactggccgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggcacttaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcaggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgccccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------gg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctataacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcaaacggcatatgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------tcaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ268408.1/1-7494 |Norovirus GII isolate Hu/US/2013/GII.13[P16]/CA-RGDS-1121, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattgaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcgaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgaggaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacatgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccggctccacttgactatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccagaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaactatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgttgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcgttt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaacgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgaactggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggacttactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +gtttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaggctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgaccttccctggtg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtacgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggcacttaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcaggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgccccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------gg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctataacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcaaacggcatatgtcacaccgccgtctagtag +agcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------tcaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctttta +a--atgtgattttattt---tccttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MZ272053.1/1-7505 |Norovirus GII isolate Hu/US/2011/GII.14[P7]/CA-RGDS-1122 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggcgctgtacccaagagcact-------------aaagcaccc +agcagtgg----------------tcaacattgtcccacagttaagatcgggcccaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------attgtg +cagtttgatg----------caaagtcggaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatataccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaaatt +cccctacacggcctttagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccgaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcagaacttttc---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +gcttgttcctgtggttatgggtggcataggaatggtcctcggtttcaccgctgagaagataggccgtatgct +gtcgtccgccgcatcaacactgcgggcatgcaaagacctaggaaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +actagatatggaagctatagggaataaccacctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacctggaagaggaaaaagcaaggaaactgtccacaaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgccgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagtggcgatcagagagtcggactcgtcccgcgcaacggtgt +cgaccactgggatgcctacagaggggagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacattacaggagttggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaagcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +agagggacttccctggccaacctgacatgtggaaagaccatttcaagtcagacttttctcatatcaagctaa +ctttagccccccagggtgggtttgataagaatggtaacactccacacggtaagggcactatgcggtccctga +cccagggttccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcatttagaaaactggctgcagacaacaagt +atggtatcatggaaacgatgagagtgggtgcggcgctcaaaaatgtaaagaccttggaagatctaaaacttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaacgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtttacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggatgtgaatgagtccga-----gaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctgtgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcacccccaagtgtctggtcgagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacaggcctcgtgttggaggaaggcgccccagagggcactgtctgttctatactcataaaa +agacctacaggtgagatgattcccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatctcggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgttgcgggtgtccataccgcagca +gcccggggaggtaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagacgccttgccacctggcacgtatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaactacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagcccttccatgcagagtaggaatg +aacatgaatgaagatggccctatcatatttgataaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagccagcttgatgttggtgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcgcgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaaggggacctaaccatgagaacccgtacgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcccgaactcaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagattct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgccctcatgt +gatagtggatgtgaggcaattagaaccagtgcttctgccaatgccagatataagaaatgttttctaccacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacccacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttagaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaactt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagagcc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaactacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggtgttgcaagccaac---gctcttccag------ +---------------tga-----caatgccact--------agg-----------gcacatgatgcacagat +tgacactgcgggcgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctgccaaa +ctatggtggtcac-cttgcc------ctgaacaatcatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagcggctccttccca +atctgacattgcactggtaaggttcatcaaccctgatacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagggcgcctatgacacagattcttgattggaatggt +tctaggtattgggcccctaactccatgaagacaactggctattcaggtacattttcttcccaaggcatta-a +aa-----------gttccccctacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgttgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttcct-----------ctagtgtatatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tcaag-------------------atctaactccgtgt---------ccacaaagac +ctccac-------------------att--------------gtcgaggacaagtgactgggttagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ272475.1/1-7505 |Norovirus GII isolate Hu/US/2011/GII.14[P7]/CA-RGDS-1123 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggcgctgtacccaagagcact-------------aaagcaccc +agcagtgg----------------tcaacattgtcccacagttaagatcgggcccaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------attgtg +cagtttgatg----------caaagtcggaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatataccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaaatt +cccctacacggcctttagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccgaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcagaacttttc---aatgtcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +gcttgttcctgtggttatgggtggcataggaatggtcctcggtttctccgctgagaagataggccgtatgct +gtcgtccgccgcatcaacactgcgggcatgcaaagacctaggaaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +actagatatggaagctatagggaataaccacctcacgaccctcctcaaggacaaagacagcctcacggcctt +tatgaagaccctggacctggaagaggaaaaagcaaggaaactgtccacaaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgccgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagtggcgatcagagagtcggactcgtcccgcgcaacggtgt +cgaccactgggatgcctacagaggggagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacattacaggagttggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaagcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtta +agagggacttccctggccaacctgacatgtggaaagaccatttcaagtcagacttttctcatatcaagctaa +ctttagccccccagggtgggtttgataagaatggtaacactccacacggtaagggcactatgcggtccctga +cccagggttccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcatttagaaaactggctgcagacaacaagt +acggtatcatggaaacgatgagagtgggtgcggcgctcaaaaatgtaaagaccttggaagatctaaaacttg +cattaagggatgtaaaattcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaacgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtttacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggatgtgaatgagtccga-----gaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctgtgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcacccccaagtgtctggtcgagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacaggcctcgtgttggaggaaggcgccccagagggcactgtctgttctatactcataaaa +agacctacaggtgagatgattcccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatctcggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgttgcgggtgtccataccgcagca +gcccggggaggtaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagacgccttgccacctggcacgtatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaactacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagcccttccatgcagagtaggaatg +aacatgaatgaagatggccctatcatatttgataaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagccagcttgatgttggtgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcgcgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaaggggacctaaccatgagaacccgtacgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcccgaactcaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagattct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgccctcatgt +gatagtggatgtgaggcaattagaaccagtgcttctgccaatgccagatataagaaatgttttctaccacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacccacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttagaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaactt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagagcc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaactacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggtgttgcaagccaac---gctcttccag------ +---------------tga-----caatgccact--------agg-----------gcacatgatgcacagat +tgacactgcgggcgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctgccaaa +ctatggtggtcac-cttgcc------ctgaacaatcatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagcggctccttccca +atctgacattgcactggtaaggttcatcaaccctgatacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagggcgcctatgacacagattcttgattggaatggt +tctaggtattgggcccctaactccatgaagacaactggctattcaggtacattttcttcccaaggcatta-a +aa-----------gttccccctacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgttgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttcct-----------ctagtgtatatagttctccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctc-------cagg--------aa +cagggtc----c---tcaag-------------------atctaactccgtgt---------ccacaaagac +ctccac-------------------att--------------gtcgaggacaagtgactgggttagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ265003.1/1-7492 |Norovirus GII isolate Hu/US/2011/GII.3[P16]/CA-RGDS-1113 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gtttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaagcagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcgttcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgctgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---taggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaagtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaagaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaacttttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaggggccagaagaccttgccgttga +gctcgtacctgtggtaatgggagggattggtctggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcttatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggaccttgaggcaatagaaaataatcacatgacagccctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgatagaattgaaaataa +gggaaaggtttttgacagtgatgtcataataattacaacaaaccttgctaatccagctccacttgattatgt +caattttgaggcctg-ttccaggagaattgacttcctggtatacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccactttcaattttgaccggaacagagtcaccgcattcagacaattggctgcagaaaacaagt +acgggttggtggacaccatgaaaattggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtacaagaagcagtctactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---aggccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcgtatcttctaaggacatcaaggaggaaggaaagaaaggcaaaaata +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagtctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gctcgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacacctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcaacaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggtatccccac +cacgtccgaaagaatgaattctggaatggtgagacctttactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttggac +gggctcaccttcctccggaggacggtgactcgtgacccagctggctggtttgggaaactggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccttctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctkcyccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcacatcttgctaggatgtacaa +cggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcaaattacaatgtgtcctcatgt +gattgtggacgtcaggcagctggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcacta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtgttgactaggcccagtcctgatttctcatttaatttcct +cgtcccgcccactgtggaatcaaagacaaaaccttttaccctccctatcttgactatctctgagatgtctaa +ttctagg---tttccagtgccaattgactctctgcacaccagtccgactgacaacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgaatcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagagccagagaccaaactgacacagcagccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tataggcacatacaactggacaacctaaatgggaccccatatgatcctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaggtctttggcgtagccagccaga---gaaacattg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattaggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgacgaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---tattggggtt---------gacaatgaggcagac---------ttccaacaatggaccttacctaa +ctattccggtgag-ttcacc------cacaacatgaacctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggtattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggaagggtgttatttgaggctaaattgcataa +gctaggctacatgactatagctaagagtggtgattctccaataactgtacctccaaatggatactttaggtt +tgagtcttgggtgaaccccttttatacattggcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------tatcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaggctacaggctgatatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacctcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaatttcaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccagttca-----------ccaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------caggactagggactgggttaaccaaca +gaattttaatttggaaccatacatgc---ctggatctctcaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------cagaca---cggtctcaaccgtgcccaa +gagcgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ265063.2/1-7487 |Norovirus GII isolate Hu/US/2011/GII.1[P33]/CA-RGDS-1112 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatt-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +gggtgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatcttggagatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggccattagccttgcaaaggttgaactgacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcttagatctaaatgactcttggct +cag---cagaaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcgtctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaagttggt +catgaagtggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaagacgcagt +gctagacctcgaagcaattgaaaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggatcttgaggaagagaaagctaggaaactctccaccaaatccgcttctcctgacattgt +gggcacgatcaattcacttctggcacggatagcagctgcccgttccctggtgcatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaagacccaccttgccag +agatttggcaaagaaagttgcggccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaacctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaagttga +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcgggactcctccacgaaagactggacgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaaccgtgtcagagctcaaacagg +cacttaagaacatctcaattagaaggtgccagatagtctacggtggtcttacatattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcaaaccaacaatgagctaactggcgcgc +tacaccatctgagatgcgctaggattaggtattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------ggccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaggaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggttacaggctcagaaa +tcaggaaaaggaatccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagtctctttataacatccacccatgttatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagatttccgaagccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggcacccatgcaactatgaagatccaaggtcga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggagtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaactcaaggaagtgagggcgaggccgtacttgaaggtggtgac +aacaaaggcacctattgtggcgctccaatcctaggtccaggaaatgcccccaagctcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agggtaaaaggtggcccctcgttacagcaagttatgagagaccaactgaaaccgttcacagaacccagaggt +aagccaccaaagcccagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggtcacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaagatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggttcagatctggcaaccatgatccgttgc +gcacgagcgttcggagggttgatggacgaactcaaggcccactgtgttacactccccatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgaaaaacactctaggtacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgtcttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-agctcagattgtcgcagaagacctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacttcacaatggaactccattgctcattgg +ctcctcacgctctgtgcactatctgaggtaacagatttatctcctgatatcatccaaacaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaactagatccagaaaggctaacagtcaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttgcggagaactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaatcatgaggacccctctgaaacaatgataccacactcc +caacgacccatacagttgatgtccctattaggtgaagccgcattacatggcccatcgttctacagcaaaatc +agcaaattggtcatatcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagaaccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttccatagctgcccctctaaccggccaaaataatgtgataga +cccctggattagaatgaactttgtccaagctccaaatggtgaatttacagtatccccccgtaattccccagg +tgaagtgttgttaaatttggaattaggccctgaattaaatccattcctggcacacctttcaagaatgtacaa +tggttatgctggtggggttgaagtgcaggtgctactcgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattacaatgttccctcatgt +aattattgatgttagaactttagaacctgtcctcttacctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggttc +tggtgatgatgtgttcacagtctcttgtagggtcctcactcgcccctctccagattttgattttaattattt +ggtccccccaactgtggaatctaaaaccaaaccattcaccctgccaatattgaccatcggagaattgtcaaa +ttctagg---ttcccagtaccaatagatgaattgtacaccagccctaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggcaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gatcaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaatgcaaatgggacttcctttgaccccactgaagatgtccctgc +accattgggcacgccggatttcctggcaaacatctacggagtcactagtcaaa---gaaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggta---------cttgggaaga +aagtgatct---tgatctcaatcaacctacca---------------------------gatttacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctcccctcttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggagtcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtccctcctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcagggcttgccggtgatatagtcaccaatggcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaa--- +------------------------------ctacaacaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtattgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccacgaaaacaactgctttctccggcgggttcacaagctct--------- +cc-------------caataccaggactattgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acgcctgtgtc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctagcttttcttcttcga-------------- +----------ctagga-----gctcttataa------------ttc---------------------ccagc +ccatctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgttacaaactgcttacgtgacgcctccctctagtag +agcctcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------c------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ265142.1/1-7540 |Norovirus GII isolate Hu/US/2013/GII.5[P40]/CA-RGDS-1116 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggcaataccagcacaaacagt +gtaattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgctcccagggttccctccccca +acagggagggaagacatgaaaccactcctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcactcccctctccttatactg +gagaacagtctacaccccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagctgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgctgttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgtt +aagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccctctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaaccctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaatcggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttgtggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatctggg +ccagaccaga------------aaaaca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagttaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggcaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagccgccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtccttcaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacactgccgccctcaaagacgagctcgtcaag +actagtaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacctaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacacatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatggaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagctttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcttctccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctatctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttaggcacaacccaactgcaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtgctcagccaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaatac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggcccccctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgatttcaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctggctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtacgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------accaattt------cacaaattctactcaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagataattag---- +-----------tgat------------------------------------tg------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ265418.1/1-7531 |Norovirus GII isolate Hu/US/2012/GII.6[P7]/CA-RGDS-1118 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----cgcgatgaagat---ggcgtctaac-gacgcttccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggataccggatttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctagcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattacaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctgtccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggaccagaccagtggttgttatgatctcaggcagacctggcattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtagggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacttgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaaggattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgataccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaggtcg +ccttgagagatgtaaagtttaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggtaaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacggaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggggtacttggcttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggcgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgagggggcaacactgtcatttgtgccacccaaggacaagacggagaggcagtccttgagggaaatgaa +gacctcggtacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagaaaataaagaagagacttctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcagaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcgcaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaatccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaagacacc---ccccggatgaggcttgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccctgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagctgtctaa +ttcccgt---tttcctgctgccatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgctgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatttaacag--- +--attccccccag--------agagcccgta----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggcgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atccgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgcgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaacagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcatactgcccc---------------------------a +tcaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccatccactgtttcttcac----------------- +---------------------aattaactca---ttcaacagtgttgtctg-------cagg--------ag +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------ttt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ265480.1/1-7514 |Norovirus GII isolate Hu/US/2012/GII.6[P7]/CA-RGDS-1119 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcttttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttccaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------tgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggtacaatactggagatgtgggatggtgaattctaccattactccgtatacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgctgctgggtgctcgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagattaaaaaggtggccaacgcgattctttgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggcgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcatccgctgcatcaacactgcgggcatgtaaagacttggggaattatgcccttgacatattgaaactggt +tacgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgatcgaggatgctgt +cctggatatggaagctataggaaacaaccatctcacaaccctccttaaggacaaggacagcctcacggcttt +catgaagactctggacctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagatatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggccaaagaagaaat +gtttagcaggattagacctgtggttgttatgatctctggtagacctggcattggcaaaacccacatggcaag +gcacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgcgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagggtcgactttctggtctacgcagagtcaccagagattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggcggatttgacaagaatggcaataccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggaa +ccgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagacattggaagatctgaaagtcg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaaattgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +ttcttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaagccaactgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaatggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +ttttctgggtctcgt-ccaacctcctgatcacaacaacacacgtcctgcctaagggaattaaagaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggtttagattcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagagggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacgggggcaaatgcgaagaacatggatcttggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaatactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgaa +agccttggcacttactgtggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccagaggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacggttatgaatgttctggaacaaaccattgac +cctgctaagccatggacctattcccaagcatgcgcctctctggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgatcactggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcaacccgtgtacacggccgcactcaaagatgagctagtcaaa +actgataagatctacaaaaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacctagccagctagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacagtggaattcaatagcacattgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagattgtcagcactgacatcaaccttgatcccatgaagctgacacagaaactc +agagagtatggtctggtccccactcgacctgataaaactgagggtcccctcgtgataactgaagacctcacc +ggcctaacgttcttgcgcaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagctcatggcccttctcggcgaggcttccctgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgcttccgcatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggtcatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccctatctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagagaacatcagtgcagctcaaataactatgtgtccccatgt +aattgttgatgtgagacagcttgaaccagtacttctgcccctccctgacataaggaataggttctttcatta +caatcaggagaacacc---ccccggatgagacttgtggctatgctttatacccccctgagggc---caactc +tggtgaagatgtgtttactgtttcctgtagggtcttgacccgtcctgcccctgattttgagtttactttctt +ggtaccaccgactgttgaatcgaagactaaacctttcacattgcccatattaactcttggtgagctatctaa +ctccaga---ttcccagccccaatagatatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggctagtcaga---gagatgtgtcagggca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcccga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgcttttccgggcg +agaggattcttttcttcaggtcagtagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaacaaccccatcgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcattcaaacatgataaagagatgttgcaa +tcgcaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtctcctgccccttctctgcatactgcttc---------------------------a +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagtttcccttcctctgtctcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtcag-------cagg--------aa +ccggttc----t---tccag-------------------gtccatccccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------at--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MZ233435.1/1-7566 |Norovirus GII isolate Hu/US/2012/GII.4 New Orleans[P4 New Orleans]/1114 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtctcgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtattg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatctggagaaacgtt +tccctacacagcctttgataacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gtg---caggagaatgatccagagagctactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgacctcgaggaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggatgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcatcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atggactgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgtcagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgtacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagatcaacaatgagctgactggcgccc +tgcaccatttgaggagcgccagaattagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgccggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaagaaca +aggctggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctccgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtctggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggccacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacgggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagtatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggtaagctagcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgagctcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccgtacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtggcccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactatcaaattgatagcgatgttgtacacaccgcttagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgtcgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcacccaca----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacgga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaagcagccccagcaca +atctgatgtggctcttttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctacgttacagtggctcacactggccagcatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcgt---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttccccc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccga------------------c +aactgc---------------------------------------aaggactaggagttgggttggggatca +aaataggaatttgtcaccttttatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MZ233536.1/1-7568 |Norovirus GII isolate Hu/US/2012/GII.4 New Orleans[P4 New Orleans]/1115, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtctcgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtattg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatctggagaaacgtt +tccctacacagcctttgataacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gtg---caggagaatgatccagagagctactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgacctcgaggaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggatgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcatcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atggactgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgtcagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgtacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagatcaacaatgagctgactggcgccc +tgcaccatttgaggagcgccagaattagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgccggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaagaaca +aggctggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctccgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtctggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggccacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacgggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagtatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgagctcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccgtacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtggcccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactatcaaattgatagcgatgttgtacacaccgcttagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgtcgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcacccaca----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacgga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaagcagccccagcaca +atctgatgtggctcttttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctacgttacagtggctcacactggccagcatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttccccc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccga------------------c +aactgc---------------------------------------aaggactaggagttgggttggggatca +aaataggaatttgtcaccttttatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MT364242.1/1-7492 |Norovirus GII isolate 085_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacaaaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttctc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcattttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagacactaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcatg-ctccagaagggtcgactttttggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcacgagagaagagacgagtttcagctccaaggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aagtcgccggagcatcattcgttgtca---------------acagga------tctcgaaaaggtactgct +gggagagatgggtcaaaccaaccgaaac-------------ccaggaaatgattgcatccga-----aaagg +aagttgcccttctta---ccttctggtttgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttc +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcaggttcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgtagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgccatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtgataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtattggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggcccttctcagtgaggcctcactgcatggtccccagttctacaagaaagtt +agcaagatggttattaatgagatcaaaggtggtggtctggaattctacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcccgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcggcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +tagtcagggaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcatgtaca +acatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccatccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggaacgagtgggaattgcctga +acattatggtcac-ttcact------cttaacatgaatttggcccccgcagtcgccccagctttccctggtg +agcgtattctctccttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcataccacaagaatgggttcagcatttctaccaggaggccgcttcatcaga +ggccgcggtcactcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaattgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccctcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT363962.1/1-7404 |Norovirus GII isolate 084_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacccccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttttggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaagaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgaaatcaaacagattcagatccataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggtcgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcagtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +tagtcagggaaatacc---cccaggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtataccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacagcctaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggagcgagtgggaattgcctga +acattatggtcac-ttcact------cttaatatgaatttggcccctgcagtcgccccagctttccctggtg +agcgcattctctccttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgtctcataccacaggaatgggttcagcatttctaccaggaggccgcttcatcaga +ggccgcggtcactcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aagttaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +a----------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661246.1/1-7625 |Norovirus GII isolate BMH11-021, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +agatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggaaaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactgtggatgactcaaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaaccctagacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +cgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtacacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcttg-ttccaggagaattgacttcctggtgtacgccgaggcaccagatgtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggacgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgatcggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcagccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggagggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaagcacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtgggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacagtga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaacgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacagcaaatcaccatgtttcctcatgt +gattatagatgtaaggaccttggaacctgttttattaccacttcctgatgttaggaataatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttataccccccttaggtcaaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataatag +ccct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtattcccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgacagctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcttttgct------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggtcagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttaa +g-agtaaattga-tttt---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa--- +- +>MW661247.1/1-7580 |Norovirus GII isolate BMH12-030 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcctatagtg----------ccaa---agatggcgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactaaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtacgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgctagggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagaccttggtgcatatgggctagaaatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaatcatatgaccactttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcgcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgagaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgagctgcagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaataatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagtacctccattcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aaactggccgtggtaaaaagcatacggccttctcaagtaaaggtcttagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaagaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactacttatcaaa +aggtctactggagaactcatgcccttagcagctagaatgggaacccacgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctaacagggtccaacgccaaaagcatggatctaggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcgtccacagcaccacttccacctggcacctatgagccagcctaccttggtggtagagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctaaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgaattagttaaa +actgacaaagtttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtcttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccagatacagataccactatgatgctgattac +t-ctcgctgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcttgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatccgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccactcagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtaccacctacagttgagtcaagaactaagccattcactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttattgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccata----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcgattttcta---------ctgacacaga +taatgactt---tgaaactcaccaaaacacaa---------------------------gatttaccccag- +--------tcggtgtcattcaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccaggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaagcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tgtaatggctggaactttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccagaggattgattttgaaaataacagaaaattg +cagcaagcttcctttcagtttagtagtaatctacaacaagcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaactgatgaaagtcaaacaggcaatactcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaagactttggactggagtgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggacccc------------------------------ +------------------------------tatccccgcccggggctcccca------------------ag +catgtctt-----------ccaat------------gtttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------cctct- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MW661248.1/1-7550 |Norovirus GII isolate BMH13-039 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +gactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgcccccttacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactatattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatt +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acgaggacagatggctcaaca--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggactggcatctgatgtccttggctccggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgacacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------ttttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggtgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ctcttt +a-gt----------------gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MW661249.1/1-7559 |Norovirus GII isolate BMH14-054 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +agatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggaaaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactgtggatgactcaaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaaccctagacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +cgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtacacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcttg-ttccaggagaattgacttcctggtgtacgccgaggcaccagatgtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggacgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgatcggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcagccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggagggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaagcacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtgggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacagtga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaacgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacagcaaatcaccatgtttcctcatgt +gattatagatgtaaggaccttggaacctgttttattaccacttcctgatgttaggaataatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttataccccccttaggtcaaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataatag +ccct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtattcccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgacagctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcttttgct------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggtcagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttaa +g-agtaaattga-tttt---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +------------------------------------------------------------------------ +- +>MW661250.1/1-7505 |Norovirus GII isolate BMH14-056 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------tttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtggtga----------------tcagcactgcccctcagttaagattgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaacagtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcatccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcatggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggattagacccgcggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtaggactcatcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatctagtcaacccggcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ccctagccccacagggtggatttgataagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggttccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgataccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaggatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacgaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcgcctccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacgacacacgtcctgcctaagggggttaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcaggttcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggtaaggacccc +agagtggaaaaaggaccatctctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaatcattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtatacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggcacaatgatcaggtgt +gccagggcttttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccattatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atccttaccttgagtgcaatggcagaagtgtcgggtctctcgccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatagtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcagttgcacgggacccagctgggtggtttgggaaattggaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtgagacagcttgagccagtgcttttgcccctccctgatataaggaatagattctttcatta +taatcaggaaaacacc---cctcggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacagtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagaactgtccaa +ctccaga---ttccccgctccgatagatatgttgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgcttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gc---------attctgaatc +cactgattt---tgatgatggacagcctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcctga +gtattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgtctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaattggacaggggcgcaga---------ag +ggttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaatcaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccccacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aagtcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttttgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgca---gc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW661251.1/1-7608 |Norovirus GII isolate BMH15-059 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctggcaccgctctctttgttttg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggtttttcccaaagaaagaggaagcaaatgagttggctatagtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggcctagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgctctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtagagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaacttt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacaacttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtaaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatattatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggcaccaccaagcatctggtcacggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaaatgatgtggcgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacattactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcgaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctataagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggaccagggagtgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagtggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaagcc +aacttaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatttcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcgaaactc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccgcttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attctcaggcaaatgtactggactaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgtcaggaataatttttatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaacctttctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgttatccaagatggtagcaccacccaccaaaatgaaccccaacagtggatgctcccaag +ttactcaggtaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttagactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctc-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +gactgc---------------------------------------gaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgac-----tat---ct------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttttaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaa------------------------------------------------ +- +>MW661252.1/1-7596 |Norovirus GII isolate BMH15-063 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgtaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctggcaccgctctctttgttttg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggtttttcccaaagaaagaggaagcaaatgagttggctatagtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggcctagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgctctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactagattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtagagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaacttt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacaacttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtaaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatattatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggcaccaccaagcatctggtcacggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaaatgatgtggcgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacattactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcgaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctataagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggaccagggagtgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagtggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaagcc +aacttaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatttcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcgaaactc +aaggagtacgggctaaaaccaacccgccccgacaaaactgaaggaccgcttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attctcaggcaaatgtactggactaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgtcaggaataatttttatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaacctttctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgttatccaagatggtagcaccacccaccaaaatgaaccccaacagtggatgctcccaag +ttactcaggtaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttagactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactc +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctc-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +gactgc---------------------------------------gaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>MW661253.1/1-7589 |Norovirus GII isolate BMH15-067, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaagcagccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagaaaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gcgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaaccgtggcacagcc +tgacgcacaaaacacagcctatagtgttcccccacttagccagagagaggtcggcgaagctaaagaaccgtt +gcctggttccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttaagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +gccaactatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttaaaccactgaacattcttaatatactagcaacctgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgaattagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaaggaaactgtcaaccaaatcggcatcacccgacatcgt +gggcacaataaacgcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgatcaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagagggtggttctgtgggatgattatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataatcataacaaccaaccttgcaaacccagcaccactggactacgt +caacttcgaggcctg-ttctagacgcatagatttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggctttgataaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaatttcgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaagcgtcagaaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatgggtgcacctataccatggaatctgatg +ggaggaacaaggtcgtggttgaaaaggttcaaaatgcaacagttcaaaccaacaatgaacttgcaggagcac +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaggaagctatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaagagggtgatga--------gcctgaagaaaaaggaggatgccccaagcccagg-- +-gat----gaagatg---atctcactattgactctaaagacattaaggtggaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagacagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccgacccactaggaagcagcggaaagaggaaagggccacacttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggatggg +gattctgggtttctc-caagtctcttcataacttcaacacacgtcataccaaaagggatcactgaggccttt +ggagtgcccatgaaccaaatccaagttcacaaatctggagaattttgccgcttgcggtttccaaaaccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggagctgatgcctctcgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acagtgggtggtcagatgggtatgctcctcactggctcgaatgctaagagcatggatctaggcacaacacca +ggtgattgcgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gctcgtggaggcaatacggtcatatgtgccacacagggaagtgaaggtgaagccactctcgaaggaggtgac +aacaagggcacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggaggtcttctaatgcaccgcttcccccaggtacttatgaaccagcatatcttggtggaagagacccc +cgtgtgaagggaggcccatccctgcaacaggttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaagccaaatgtcctagaatcagcaaagaggactatcatcaatgttctggaacaaaccattgac +ccccctgaaaagtggtcatatgtccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaactttatggcaagatcaagaaaagactcctgtggggctctgacctatccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aacatgaatgaagatggccccataatatttgaaaaacactctaggtacagataccactatgatgccgattac +t-cccgctgggactccacacagcagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgacttc +aaaattgctattaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgaaattgtgagcacagacataaaattggacccagagaaattgactgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaagggccgctggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcaggttggtttggaaagttggaccaaaactct +attctcaggcagctgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagaggggggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgccccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaatgcgttcactgc---cgggaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcctaagcccagcccagattacaatgctcccacatat +aatagtagatgttagaactcttgaaccaatcatgatcccactacctgatgttaggaatacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggctc +aggtgatgatgtttttactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacccattctaaccctttctgagcttacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttacaggtacagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccttctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaacc----------------------------------ctgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aacgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcgacctatagccccaaatttgtccccaaattaggctctgtcaattttaaa------------agtaatga +tgatgattt---ccaatt---gcagccgacaa---------------------------gattcacaccag- +--------tgggcatca---atgacgatggta---------accacccgttcagacaatgggaactaccaga +ctattcaggggtg-cttacc------ttgaatatgaatcttgcccccccggttgctccaaattttcctggtg +aacaattattattcttcagatccttcgtgccat------gttcaggaggtta------taacc--------- +--aaggcattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagatgtggccctgatcaggtatgtcaaccctgacacgggacgcacactgtttgaagcaaaattgcacag +gtctggctatatcactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtgatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgcttcaa +gcgcaggtgaaggcaactaaacagctgcaatctgaaatgatagccctaaaacaaggggttttggccgcaggc +ggcttttcccccactgatgcagcgaggggagccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcggtactgggcacccaactccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagcccag--------------------------- +------------------------------gtctctagctccttcctcttcttctggt------------ag +t--gtcca-----------tagta------------tg-------tctacccaactaacttctctaacat-- +----------ctggct-----ctcttagtaa---------tgcttcttctgcctctacaaaattgacaaatt +caagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttggccctttcatga---gtggcgcactcaatatttcacatgtcacgccaccctcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacatctgcat------------ttaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---aaat--atg-----atttct-----------tt---------a--aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaa------------------------------------------------------- +- +>MW661254.1/1-7591 |Norovirus GII isolate BMH16-074 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgtcttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgagtttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactgaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgtacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagattac +t-ctcgctgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccggattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagaacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccggaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccagtttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcggcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctactcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtctttaaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +------------------------------------------------------------------------ +- +>MW661255.1/1-7577 |Norovirus GII isolate BMH16-077 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatggtccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactccaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcggagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtgccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaattctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcattgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgttatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaactatgaagatacaagggcgc +actgtcggaggtcaaatgggtatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactatgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggggaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcggcagccctagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggttggtttggaaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgaccctgcagaagacataccagg +ccccctagggacaccagatttccgaggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgagacagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaacgggcgtaga---------ag +agttc---------aataatggctggtgctt---tagcaggactagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaagatactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-atttgatttgg----- +----------------a---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>MW661256.1/1-7561 |Norovirus GII isolate BMH18-085 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ccc-----------------------------tcctccacctaatggcga---agaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctacggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcgtaccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacagggtcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaaaagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacctctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataaccgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccactcagggctaataatgc +tggagatgatgttttcacggtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctaactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccactcct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +ccaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttcttt +t---------ctttagt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MW661257.1/1-7558 |Norovirus GII isolate BMH18-086 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctggcaacttt---aacattgccaac +a------ac----agtgaaaacactccccctcccgttaaggaagaggc------gagtgtcctatccaacgt +aaaagttggattcaagaaaa----tattgggggctgtgcctaagcagccc-------------aagccacc- +agaagtgaaaa------------ccaaagatcaacccagggtgctggtcaatggtaaggccctggaggtgcc +gcc-----------------------------cccaccaccaaatgg------tgaagac------gtggtt +tactataaca----------gcaaggatgacactgtgcacggcctaccaaatctaacaacagt---cagctg +tgaaggcgaaaaccttccgtacacagttcctcctctcagcgagagagagcacagggcagcaccagaaccatt +acctggcaccatactagagatgtgggatggtgaattctaccattatgcgatatatgtctctggtggtaaggc +cataggggtgcacaaacccccagctgcaatcagccttgccaccatcgagcttacacctatatcgctttactg +gaggcctgtttatgtcccca---attacttggtccaccctgacacactcaagagcttagctggtgaaaaatt +tccatacaccgcatttagcaataattgttacaatttctgttgctgggttcttgacttgaaagactcgtggct +taa---ccgcagatcaataactagaacaaccggtttcttcaagccttatcaaccctggaacaagaaaccact +tccgacggtggatgatggaaaaatcaagaaagtcgccaatgcagtcctgtgtgcccttggttcactattctc +aaaacctattaaggacttgatcgggaagctgaaaccactgaatttcttgaatctcctcgcttcgtgcgactg +gaccttctccggagtggttgagaccgtcatactagctgctgaactattc---ggtgtgttttggaccccccc +cgacgtgtcgaacttcatcgcgtcactcatcggggacttcgagttgcagggtccagaggatttagctgtgga +gttggtgccgattatcatgggcggcatcgggatggtgctgggattcaccgccgagaagatcggccgaatgct +atcatcagctgcatcgacccttagggcctgtaaagacctaggtaactacgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaggaggagaaggcagagatggagaccttgagggccatagaggatgctgt +cttagacatggaagcgattggaaataatcacctcactgctctgctgaaagacagggacagcctcctaaccta +catgaagactctagacctcgaagaggaaaaggcaagaaagttatccacaaaatcatcttcccctgacatcgt +gggtaccatcaatgccatactagccagaattgccgcggctaggtctctcctacacagagccaaagaagaaat +gtacagcagacctaggcctgtcgtggtgatgatatcaggaagaccaggggttggtaaaacccatatggctag +acacctcgccaagagtgtggcgggcaccatgagcggtgaccaaagggtgggcctcatcccccgtaatggagt +tgatcactgggatgcctacaggggggaacgagttgtcttgtgggacgactatggcatgggtaacccagtgaa +ggacgcccttgctctgcaagaactagcagacacttgtccagtcaccctcaattgtgacaggatagagaataa +gggaaagatgttcgatagcgaggtaataattataacaaccaatctggccaaccccgccccgcttgattatgt +caactttgaggcatg-ttcccgcagaattgacttcctcgtctacgcagaggccccgaccattgagaaggcga +agaaggatttccccgggcaaccagacatgtggaaggagcacttcaaagcagacttctctcatctcaaactca +cactggctccgcaaggcggttttgacaagaacggcaacacgccacatgggaaggggactatgaagaccttaa +cacagggttccctcacagcaagagtggctgggcttgtgcacgaaaggaaagacgagttccagttacagggtg +gggagttgcaggtctacaactttgacacaaacaaggtatcggctttcaggaagcttgctgcagacaacaact +atggatttctggagacaatgagagtcggctcctcactcaaggacgtcaagacagtggaagatcttaaatgtg +ccctcaggagtgtcagtttcaaagaatgtgagataatctacaagaatgtcaagtaccgcatatcatcagacg +gttgcggtaaggtcagcatagagaaactggcagataacaactcccaaacaaccagagagattatcacggccg +tcactagactacgacaggctcgtgctaggtactacatcagctgtttccaagacctagtctacacactcttgc +aggttgccggagcctcatttgtcatta---------------atagaa------tagttaagaagttcaact +gggaacgatgggtcaaggctccggaaacagatgaacccacaccaagtaatga-caagcccgac--------- +-----actgaagagg---aatgggagatcgcccccaaagatgtggactctgagggtaaaaaggggaagaaca +agaagggcaggggacgtaagcacactgcattctccagcaaagggcttagtgatgaggagtatgatgaattca +aaagactgagggaagagaaacagggccgctacacaatagaggagtacctccaggacagagaccggtac---t +atgaagagctggcagtggcccgggccactgaagagaacttctgtgaagaggaagagataaagatcaggcaaa +gaatattccgccccaccaaaaagcagaggaaggaggagcggggggttctgggactcgtcacaggagcagaca +tcaggaaacggagacccgatgatttccaaccaaaaggaaaactgtgggcagatgattctaggagcgtcgact +acaatgagaagatcgagtttgaagctcctcctagcgtctggtcaagaatcgtcccgcttgggactggttggg +gattctgggtctcat-ccaacttactaatcaccaccacacatgtgctgcccaaaggcatcaaagagcttttt +ggggtggacatcaaacaagtccaagttcacaaatcaggtgaattttgcagattcaggttcccaaaaccagtg +aggccagatgtctctgggttggtactagaagaaggggcccccgaaggcacagtgtgctctgttctcatcaag +aggtcaacaggagagatgatcccccttgcagttaggatgggcacccacgcctctatgaagatccaggggcgc +gctgttggcggccagatgggcatgctgctcactggagccaacgctaagaacatggatttgggtaccggcccc +ggggattgtggttgcccgtacatatacaagaggggcaatgacatcgtggtggccggcgtccacacagcagca +gcgcgtgggggcaacacggtcatctgtgcaacccaaggacctgatggtgaggcagtgttggaagggggagag +gaccacggtacttactgtggagccccaatattagcccctggtaaagcgccgaagcttagcacaaagactaag +ttttggcgctcatcccctgattcccttccccctgggacgtatgaaccagcttaccttgggggtaaggatccc +cgtgtggagaaagggccatcactccaacaagtgatgcgagaccaactcaaacccttcacagaacccaggggc +aagccacctaggccgtcagtgctggaggaagccaagaagacagtcatgaatgtactggagcagaccatagaa +ccagctaagccatggacctactctcaagcctgtgcttcattggataaaacaacatccagtggcagtcctcac +cacgtcaggaagaatgaacactggaacggggagtctttcactgggcctcttgcagatcaagcctcaaaagcc +aacctgatgtatgaggagggtaaacacatggaccctatgtacacagcagccctcaaggacgagctggtgaaa +actgacaaaatctataagaaaatcaagaagaggttgttgtgggggtctgatctggggacaatggtgaggtgt +gctcgagcgtttggaggattgctcgacagcatgaaagagagctgcatctccttaccctgtagggttggcatg +aacataaatgaagatggaccactcatatttgaaaaacattccaaatacacctatcactatgatgctgattac +t-ctaggtgggactcaacacagcagagggctgtcctgagtgcagccatggaggtaatgg-tgaaattctctg +ctgagccggaact-ggctcaggtggttgccgaagacctccttgcacccagccgtcttgacgtgggtgacttc +gtcatctccgttcaagagggtcttccatcgggtgtcccctgcacgtcacagtggaactcaatcgctcactgg +atcctgactcttagtgctatgtctgaggtctctggtctttcccctgaggttgtgcaagccaactcctgtttc +tcattctatggggatgatgagatagtcagcacagatataaacctagacccagaaaaactcaccaggaaactg +agggagtatggcctcgtcccaacaaggccagacaaaactgagggcccacttgtgatcactcaggatttgaat +ggtctcacattcttgaggcgaaccatagtgcgggaccccgcaggttggtttggaaaattggaccgtgattcc +attctaaggcagttatactggaccagaggacccaatcatgagaacccctttgaaagcatgattccccactcc +cagagagcaacccagttaatggcccttcttggggaagcctcgttgcatggtccccagttttacaagaaggtg +agtaaaatggtcatcaatgagatcaagagtggtggtctggagttttacgtgcccagacaggaggccatgttt +agatggatgagattttcagacctcagcacgtgggagggcgatcgcaatctggctcccgagaatgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggcgcggctggcctcgtaccagagatcaaccatga +ggtcatggccatagagcctgttgcaggggcctctttagcagcccctgtcgtaggacaacttaatataattga +tccctggattagaaataattttgtacaagcccctgctggagaattcactgtttcgcctagaaatgctccagg +tgaatttttgttagatctagagttaggtccagaactgaatccttatcttgctcaccttgcacgcatgtataa +tgggcatgcaggtggtatggaggtgcagatagtgcttgctgggaatgcgttcacagc---gggcaaaatact +gtttgcagtcataccacctggattcccctatgaaaatttgtcacctgcacaattgaccatgtgcccgcatgt +agtggtggatgtgagacagcttgaaccaatcctgctgcccatgccagacatccgtaatacattcttccatta +caatcagagcaatggg---ccaaaactcagattagtagccatgctttacacacccctaagggctaacaatgc +tggtgatgatgtcttcacagtctcctgcagggttttgactcgtccgtcaccagattttgaattcaattttct +tgtccccccatctgttgaatctaagactaaagctttcactcttccaattcttaagatatctgagatgacaaa +ttcaaga---tttcccataccagttgaccagatgtatactagtaggaatgaaaatatagttgttcaaccaca +gaatggcagggtgacacttgatggagagttacagggcacaaccacacttcaaccggtgtccatttgtggctt +ccgag-----------------------------------------ggacgctgcagaccagg--------- +-----------------------ctg--gc----------------------------agatcaaccaa--- +--attacaca-------------------------------------------------------------- +----------taccaagtgcaccttgagaatttggacggctcacccgtcgatccgacagatgaagtcccagc +ccccctggggacgccagattttcaggcccagctatttggagttgtcagtcaaa---ggagtagtga------ +-----------------------taatgccacc--------agg-----------gcacatgaggctagggt +caacaccaacgatcctaccttcgcgccccagatcgcccaggtgcgttt---ca---------aatcaccatc +ccacgactt---ctttgacaatgaacccatca---------------------------agttcacaccag- +--------ttggaattagtgttg---atagcg---------aaaacagctacaaccaatggctccttcccag +gtatggcgggcac-ttgaca------aacaacacccacctggccccctctgtgtccccaatgttccccggcg +agcagattctcttcttccgctcgttcatgccag------gtgccagtggtca------tactg--------- +--atggtgctattgactgcctcttaccacaagagtgggttgcccacttctatcaggaggccgcaactgcgca +aacagatgtggctctgattagatttgtgaaccccgacacaggcagagtgctatttgaagggaagctacacaa +gcagggctttataaccatctccaacagtggggaccaccccattgttatgcctgctaatggatacttcaggtt +tgaggcatgggtcaaccaattttactctctcgcccccgtgggaactggaagtgggcgcaga---------ag +ggttc---------aataatggctggagctttctttgcgggtctggctggtgatgtggtgacccctggcatc +gggtcgctcatcaatgcagg---tgctaatgcagtgaaccaaaaggttgaatatgacttcaataggcaa--- +------------------------------cttcaagaagcttcttttaaacatgacaaggagatgttgaat +gctcaaattaatgccacaaccaaattgcagagggacatgattgccatcaagcagggggttttgaccgctggc +ggcttttcccccactgatgctgcaagaggttccatcaatgctccaaccaccaaaattcttgactggaatgga +tctaggtactgggcgccaggatcaatgagaacaacagcatactctggcaatttcatatcacagggagttaag +ca-----------acctacacccattgtta--gatctgtgaaac---------------------------c +tcaagt-----------------acagcaatct--------------------------------------- +----------------------------------------------------------------------cc +tgcccctt-----------cttctgttta---ttctgtaggttctgttaagtcac----------------- +---------------------aatcaacaca---atcaactcaattaacag----ggtcagg--------ga +ctgtatc--------------------------------aagggcacccaccc---------cctcaacaac +cacaac-------------------act--------------gtccagaacaagtgagtgggtgaggagcca +gaatgataggctgagcccctttatgg---gaggcgcactccagacagctttcatcacgcccccatcgagtaa +ggcttcatcctcat------------------------------caggaa---cagtctcaaccgttcctag +agaaattttgga-ctcctggactcctgcat------------ttaacacgcgcaggcagccgctcttcgccc +acatgcgtaggcgaggggagtcacg--------ggcttag--t-----------gaaaagaatg-------- +-------att-tggttag-----------------attatat------ct-ttttctta---cctattctat +c------------tttt-----------aaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaa----------------------------------------------------------- +- +>MW661258.1/1-7513 |Norovirus GII isolate BMH19-090 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcga---agaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcctgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatagatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacatttttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggcccgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcgtaccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaagaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatctccaggacagagacaggtac---t +acgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgacccaccaggaaacagagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtaagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccggttcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacatgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgctgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagttattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaaaggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaaaaggctgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccgcaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacctctaatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacgatgataccacactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttctacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggttaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgttttcacggtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgttccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttcacaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaaccccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcaggtccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgaatgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgcaggattggcatctgacgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggacccccc------------------aa +ccaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctgggaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gt---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661259.1/1-7593 |Norovirus GII isolate BMH19-092 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggtccaaacagcct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaacaagaaccagtcgtt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +tcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaatatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaggtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcttg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagcttc +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tccaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaattcgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggtaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaacgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatttataaaaggggcaatgactatatagtcatcggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactctcgagggtggagac +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggacatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgatccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagttctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaaccgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcactacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccgg- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttctttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggtttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +caaatctt-----------ccaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtataa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------tttctttttc-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaa--- +------------------------------------------------------------------------ +- +>MW661260.1/1-7599 |Norovirus GII isolate BMH19-093 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------gc----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaacaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggggaggcgtt +cccttacaccgccttcgacaacaactgttacgccttttgctgctgggtgttagacctcaatgactcatggct +tat---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacttggaggaggagaaagccagaaggttgtctacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgacgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaggtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgctcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccacttttaatttcgaccggaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaacgtaaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgtatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaaaggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggcgcgcctgaaggcaccgtgacaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggttcacactgcagca +gctcgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaagcaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcgcaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccaccaagttg +aaggagtacggtctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atcttaaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaggatc +agcaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctatctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccggttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgtccaaccaca +aaacggtagatgcacaactgatggcgtgctcttaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccag +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggtact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctc-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaa----------------------------------------------------------- +- +>MW661261.1/1-7517 |Norovirus GII isolate BMH19-094 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttggccct---gtggactaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacga +aaa---------------------cccccaagaccaccaactcctgaattggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcatgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgataccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagatctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactaaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaactggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaatagaatcgcagcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcacgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacaccgcattctccagcaagggcttgagcgatgaggagtatgaagattaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccagggccacggaagaagacttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaatcaatt +agaccagatgtgacaggattgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgtccttacatctacaaaaggggtaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagaaaccagttgaagccattcactgaacccaggggt +aaacccccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcactcgacaaaaccacttccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcattagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtaccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgaactaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgaa---tccactattaagttgatagcaatgttgtatacaccacttagagctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccagttgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcagagg------------------------------------------------ta---- +-------ctcaac----------------------------------actacaca----------------- +----------------atgaacctggcttctcaaaattggaataactatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +caatgatct---tgatgctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccaccccccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggacttggactgtctactcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggcttacactggtgaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagttttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------ac +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactagcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaa----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661262.1/1-7578 |Norovirus GII isolate BMH19-095 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgaaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccgagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------ttaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatttaccactatggcttatacgtagaacgagggttagt +gcttggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacctgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccggccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactaggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttccgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcggt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcagccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttctaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacacttacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagttgttctatgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagataccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggcaacactcctcatgggaagggagtcatgaagaccctca +ctgccagctccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggtc +caactcccacaacattcaacttcgaccgcaacaaggtgattgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagagctcaagcagg +ccctcaagaacatctcagttaagaaatgtcagctcgtgtacggcgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtaaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaagaagctctctactccatcctac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagtagaagatctagagga--------gactaacaacgaggagggttgtccaaagcctaaa-- +-aat----gatgaag---aatttgtcgtctcctctggtgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggaatacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggtcacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaactcagtttcgaggccccaccaagcatttggtcacgaatagtcaactttggatcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgtccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgcgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgcggggcaccaatattaggccctggaaatgcccccaaactcagtaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaagtggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aatctaatgtttgaggaaggaaagaacgtgactccagtgtacacaggagctctgaaagatgagctagtcaaa +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagcctttggtgggctaatggacgagctcaaggcccattgtgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattaccctctggcgttccttgcacttcacaatggaattccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacaaacctgtcccctgacatcatccaggcgaactccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatattctggaccaaggggccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcactacatggtccatcattctacagtaaaatc +agcaaattggtcatttcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcacta +taatcaagggtctgat---tcgaggttacgtctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaaccagacctagtcctgatttctcatttaatttcct +tgtgccacctactgtggaatcaaaaacaaaacccttctccctccctatcctgactatctctgaaatgtccaa +ctctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgtca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacgagcagg------gccagtgaccaggccgatacggcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaaggt +agacaccacatctggccgcttcaccccaaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +aacagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccttggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatattttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatacagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgactgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatggg +acgagatactgggcaccaggtgccacctccacaacctcgatgtcaggtggctttaca-catca--------- +aa-------------ctgtgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-tt-aaattagatttaa-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>MW661263.1/1-7469 |Norovirus GII isolate BMH19-096 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgatctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtactg +gcgtgtagtgtacactcccc---aatacctcatttcccctgatactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaattaagaaggtagcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagaggctcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccacaggagagctcatgcctcttgcagccagaatgggaacacacgcaactatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggttataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggccggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattgggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactctagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgaggcttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------gagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaaaccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctaccaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggtttatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcagtaaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatgtccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgat------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacgaggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661264.1/1-7618 |Norovirus GII isolate BMH19-097, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacggtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaacgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggtaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaggatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagtttagcaacata +catgaaaacactggatatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagtaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgcaaacccagccccacttgattatgt +caactttgaggcctg-ttccagaagaattgacttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggactactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccactaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagtcggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtatcgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagggaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggcgcgcctgaaggcaccgtagcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatcca +cgcgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggagagaccttcacaggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaaggaaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaagcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggtccaataatatttgagaaacattccagatacaaataccattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctattggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccgtgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggaatacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttaagacagatgtactggactagaggaccaaaccatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacctgatgttaggaataatttttatcatta +caatcagtcaaatgat---tccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +aggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctctggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgcagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcagctcctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaagcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcagggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------gactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--c-----------gtgaaaagaca------- +---a-a-acc-tgat-----ta-----t------tttctttttc-------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaa------------------------------------------ +- +>MW661265.1/1-7581 |Norovirus GII isolate BMH19-100 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagccc-cccccgagggaaacaccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggcttgcctgaacttaccactgtccggcaacc +ggatgaggccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatataccattacggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcttcgccaaggttgaactggcaccactctctctattttg +gaggccagtgtacacaccac---agtacctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctatacagcttttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgattcagagaacaactggcttcttcagaccttaccaagaatggaataggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgatatcctcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaagttggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaatcacatgactgccctcctcaaagacaaagacagtctggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgcaag +ggagctggccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccattgggatgcatacaagggagaaagagtcgtcctatgggacgattatgggatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgacttcccaggtcaacctgacatgtggaaggacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccattggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgatcgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcaaaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttagatgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcaatagcaaggatggatgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaaaaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaagtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcttctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaggctcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaattcagatacacaagtcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggccacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +accgttggaggccaaatgggcatgctcctaacaggatccaacgccaagagcatggatctgggcaccacatca +ggtgactgtggttgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagccgcc +gcccgcggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggcggcaaggatccc +agagtcaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgctaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgataagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaagcc +aacctgatgtttgaggagggaaagaacatgacaccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgctggaggaactcaaagcacactgtgtcacactacctgttagggtaggtatg +agtatgaatgaggatggccctatcatctttgagagacactctagatataaatatcattatgatgctgactac +t-ctcggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaattatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtaggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcactctccgaagttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattagacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgtgacccagcaggctggtttggaaagttggaacagagctcg +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagtaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtactcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcgatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagggtgttgactagacctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattccctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactaaat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattctttg---- +-------atcttt----------------------------------cttggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcccgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtcttcggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaagt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---taaccaaaatcaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacga------------cgaggcagacttccaacaatggtccttacccga +ctactctggccgg-tacact------cacaacatgcacttagccccagctgttgctcccaacttccctggtg +agcagctccttttctttcgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggcaaagctgcacaa +attaggcttcatgactgtagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgactgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acaaggtactgggcaccgagtgccacctctacaacctcgatgtcgggtggcttcaca-agcca--------- +gg-------------ttgtgcacagaaccacaccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaacccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgagtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaattttaatttggaaccacacatgc---ctggatcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcgaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtggaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>MW661266.1/1-7511 |Norovirus GII isolate BMH19-108, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatactaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgag +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661267.1/1-7474 |Norovirus GII isolate BMH19-109 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661268.1/1-7526 |Norovirus GII isolate BMH19-110 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>MW661269.1/1-7544 |Norovirus GII isolate BMH19-111 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatactaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgag +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +------------------------------------------------------------------------ +- +>MW661270.1/1-7544 |Norovirus GII isolate BMH19-112 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatactaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgag +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtgggtccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaa- +------------------------------------------------------------------------ +- +>MW661271.1/1-7518 |Norovirus GII isolate BMH19-113, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatactaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgag +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtgggtccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MW661272.1/1-7529 |Norovirus GII isolate BMH19-115, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatttcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcgacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttagtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattaaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaagagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagagactcccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtccttgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccagatcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttcccagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttctcttgcctttaccagatgttaggaataatttctttcacta +caatcagcagcctgag---ccccgtatgagacttgtggccatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacggtctcttgtagggttctcacccgcccctctccagattttgatttcaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagagttgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtacaacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcttggcaaacatctatggagttactagccaga---ggaaccctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttagggtctgtggttttgggta---------cttgggaaga +acgagatct---tgatctcaaccaacccacca---------------------------gattcacacctg- +--------ttggtttg---------tatgatacaagccac---------tttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacattcca------cttaaaggaggcac------ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggtcgtgtcctttttgaggccaaactacatag +gcaggggttcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcctgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtaaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggctacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caataccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatccagac--------------ctaa---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gttagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaaga----------- +---t-g-gtt-ttt-------c------------tttcttc----------ca-------------cttttc +t-g---aaattt-c--c---atcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>MW661273.1/1-7533 |Norovirus GII isolate BMH19-117, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgggagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggtatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagagccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtggggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggcccttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgatactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tc-------------tattta +g-gatgaattga-tttt---actt------------------------------------------------ +------------------------------------------------------------------------ +- +>MW661274.1/1-7550 |Norovirus GII isolate BMH19-118, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttccaacaaagaagaggt------tggtgcgttatccaacat +caaagttggttttaagaaaa----tactgggtgctgttcccaaaggaact-------------aaagcaccc +agtagtga----------------tcagcactgccccacagtcaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------cgaagtcggaaaccgtgcgtgggctaccagacttgacaacggt---gcaaaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagggagcacagaccagccaccgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctgggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgctcttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctactcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcatccctaataggtgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgccgagaagataggccgcatgct +gtcgtcagctgcatcaacgctgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctggatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccaggatagctgccgccaggtccctcttacacaaggccaaagaagaaat +gtttagtaggatcagacctgtggttgtcatgatctcgggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtagggctcgtcccacgcaacggagt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccttgacactgcaagaactggctgacacctgcccagtaactctaaactgtgatagaattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgactaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctctagacgggtcgactttttggtctatgcggagtcaccagaaattgagaaggtta +agaaagatttccccggccaacctgacatgtggaaagaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctga +cccaggggtccctgactgcaagggtcgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaacttcgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +acgggatcatggagacgatgagagtgggcacagcgcttaagagtgtcaagaccctggaagacctgaaagttg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccagatatcgagtctcttccaatg +gtaaaggctctgtctctgttgataaagtcgaggaccaaacatcccagactgcaaacgaagtgggcgcagcac +tcctcaggcttaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaagaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---aatgggagattgaacccaaagacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggccttagtgatgaggagtatgacgagttta +agagaattagagaagaaaggggcggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgtcccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggatt +acaacgagaggcttgatttcgaagctcccccgagtgtctggtctagaatagtcccattgggtactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcccaaggggattaaggaacttttt +ggagttgaagtcaaacagatccaaattcataagtctggagagttctgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttagaggagggtgctccagaaggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagacggggaggcagtccttgagggaaatgag +aaccttggaacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacaaagaccaag +ttctggcgctcgtcaccagacgctctgccgccaggcgcttatgagcctgcctacttgggaggcaaggaccct +agagtagaaaaaggaccatccctacagcaagtcatgagagaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctactcccaagcatgcgcctcactggacaagaccacctccagtggtagcccacat +catgtcaagaaaaatgaccattggaatggggaatcctttactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaag +actgacaagatctataagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgc +gccagggcctttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtgggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagttcaggagggtctgccgtcaggggtaccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccattcctgtttc +tcattctacggtgatgatgagatcgttagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccctactcgacctgacaaaactgagggtccccttgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggatccagctgggtggtttggaaaattagaccaagactca +atcctcaggcaattgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtc +agcaagatggtcattaacgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtggtgggggcttcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagttcaccgtctcgccgaggaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgctgtgccaccacatttccccgtggaaaacatcagtgcagctcaaataactatgtgcccccatgt +gattgttgatgtgagacaacttgagccagtactcctaccccttcctgacataaggaataggttctttcatta +caatcaggagaacact---ccccggatgagacttgtggccatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttaacccgtcctgcccctgattttgaatttactttctt +ggtaccgccaactgttgaatcaaagactaaaccttttacattacccatattaactcttggtgagctatctaa +ttccaga---ttcccagccccaatagatatgttgtacactgatccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactttgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggaggaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtatgaccctactgatgaagtgccagc +agtcctcggtgccattgattttaaggggactgtttttggggtggccagtcaga---gggacgtgtcaggaca +-----ac---aggtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactagggtccattctcat---gc---------actcagagtc +ggatgactt---cgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggcgaca---------------------acgactggcaccagtgggagctgcccga +ctattctggacac-ctaacc------ctaaacatgaaccttgccccagcagttgctcctgcattcccgggtg +agaggattcttttcttcagatcaattgtcccgt------ctgctggtggcta------cggct--------- +--ctgggcaaatagattgcctcataccacaggagtgggttcagcatttctaccaagaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcatag +ggaaggtttcatcaccgtggctaattctggcaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggtgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---tgctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacattaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggctgtcaatgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccccgttca +ta-----------agtctcctgctcctccccagcatgttgtttc---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagttctccttcttctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ctgggtc----c---tccag-------------------gtccatctccacat---------ctacagctac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggcttagcccgttcatgg---atggtgctctccaaaccgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atttacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------atc-aggt--------------------tttctc-------cc-tttttctt---t---tctctc +t------------ttta-----------aaa----------------------------------------- +------------------------------------------------------------------------ +- +>MW661275.1/1-7584 |Norovirus GII isolate BMH19-119, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttccaacaaagaagaggt------tggtgcgttatccaacat +caaagttggttttaagaaaa----tactgggtgctgttcccaaaggaact-------------aaagcaccc +agtagtga----------------tcagcactgccccacagtcaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------cgaagtcggaaaccgtgcgtgggctaccagacttgacaacggt---gcaaaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagggagcacagaccagccaccgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctgggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgctcttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctactcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcatccctaataggtgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgccgagaagataggccgcatgct +gtcgtcagctgcatcaacgctgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctggatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccaggatagctgccgccaggtccctcttacacaaggccaaagaagaaat +gtttagtaggatcagacctgtggttgtcatgatctcgggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtagggctcgtcccacgcaacggagt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccttgacactgcaagaactggctgacacctgcccagtaactctaaactgtgatagaattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgactaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctctagacgggtcgactttttggtctatgcggagtcaccagaaattgagaaggtta +agaaagatttccccggccaacctgacatgtggaaagaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctga +cccaggggtccctgactgcaagggtcgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaacttcgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +acgggatcatggagacgatgagagtgggcacagcgcttaagagtgtcaagaccctggaagacctgaaagttg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccagatatcgagtctcttccaatg +gtaaaggctctgtctctgttgataaagtcgaggaccaaacatcccagactgcaaacgaagtgggcgcagcac +tcctcaggcttaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaagaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---aatgggagattgaacccaaagacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggccttagtgatgaggagtatgacgagttta +agagaattagagaagaaaggggcggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgtcccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggatt +acaacgagaggcttgatttcgaagctcccccgagtgtctggtctagaatagtcccattgggtactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcccaaggggattaaggaacttttt +ggagttgaagtcaaacagatccaaattcataagtctggagagttctgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttagaggagggtgctccagaaggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagacggggaggcagtccttgagggaaatgag +aaccttggaacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacaaagaccaag +ttctggcgctcgtcaccagacgctctgccgccaggcgcttatgagcctgcctacttgggaggcaaggaccct +agagtagaaaaaggaccatccctacagcaagtcatgagagaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctactcccaagcatgcgcctcactggacaagaccacctccagtggtagcccacat +catgtcaagaaaaatgaccattggaatggggaatcctttactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaag +actgacaagatctataagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgc +gccagggcctttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtgggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagttcaggagggtctgccgtcaggggtaccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccattcctgtttc +tcattctacggtgatgatgagatcgttagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccctactcgacctgacaaaactgagggtccccttgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggatccagctgggtggtttggaaaattagaccaagactca +atcctcaggcaattgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtc +agcaagatggtcattaacgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtggtgggggcttcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagttcaccgtctcgccgaggaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgctgtgccaccacatttccccgtggaaaacatcagtgcagctcaaataactatgtgcccccatgt +gattgttgatgtgagacaacttgagccagtactcctaccccttcctgacataaggaataggttctttcatta +caatcaggagaacact---ccccggatgagacttgtggccatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttaacccgtcctgcccctgattttgaatttactttctt +ggtaccgccaactgttgaatcaaagactaaaccttttacattacccatattaactcttggtgagctatctaa +ttccaga---ttcccagccccaatagatatgttgtacactgatccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactttgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggaggaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtatgaccctactgatgaagtgccagc +agtcctcggtgccattgattttaaggggactgtttttggggtggccagtcaga---gggacgtgtcaggaca +-----ac---aggtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactagggtccattctcat---gc---------actcagagtc +ggatgactt---cgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggcgaca---------------------acgactggcaccagtgggagctgcccga +ctattctggacac-ctaacc------ctaaacatgaaccttgccccagcagttgctcctgcattcccgggtg +agaggattcttttcttcagatcaattgtcccgt------ctgctggtggcta------cggct--------- +--ctgggcaaatagattgcctcataccacaggagtgggttcagcatttctaccaagaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcatag +ggaaggtttcatcaccgtggctaattctggcaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggtgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---tgctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacattaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggctgtcaatgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccccgttca +ta-----------agtctcctgctcctccccagcatgttgtttc---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagttctccttcttctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ctgggtc----c---tccag-------------------gtccatctccacat---------ctacagctac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaatgagaggcttagcccgttcatgg---atggtgctctccaaaccgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atttacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------atc-aggt--------------------tttctct------cc-tttttctt---t---tctctc +t------------ttta-----------aaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaa---------------------------------------------------------- +- +>MW661276.1/1-7545 |Norovirus GII isolate BMH19-120 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgatg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagccc-cccccgagggaaacatcacaa +agg---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttatcactgtccggcaacc +ggatgaggtcaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactggcaccactctctctattttg +gaggccagtgtacacaccac---agtacctcatctctccagatactcttaggagactgcatggagagtcgtt +cccctatacagcttttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgattcagagaacaactggcttcttcagaccttaccaagagtggaacaggaaacccct +tcccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgttatttac +taggcccattaaagacataataggaaaggtgagaccgctcaacatcctcaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggaccttgaagcaattgagaacaaccatatgactgccctcctcaaagacaaagacagcctggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagctaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatcccccgcaatggcgt +cgaccattgggatgcatacaagggagaaagagtcgtactatgggacgattatggaatgagtaatcccatcca +cgatgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagatgcccctgaggtcgagaaagcaa +agcgtgacttcccaggccaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cactggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccaccttcaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagagctcagacagg +cactcaaaaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgctactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctttggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatggatgcccaaaaccccag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaaaaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaagtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaagaaaacaacgcaaagaggagagagcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggaattcttt +ggtgtatccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaggaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagcatggacctgggtaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagccgcc +gcccgcggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggcggcaaggatccc +agagtcaagggtggcccttcactgcaacaagtcatgagggatcaactgaaaccattcactgagcctaggggt +aggccgccaaaaccaagtgtgctagaggctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgataagaccacttctagcggtcatccgcac +catatgcggaagaacgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +accgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtatcacactacctgttagggtgggtatg +aatatgaatgaagatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaattatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagacctcctttctcccagcgtgatggacgtaggtgatttc +aagatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcaccctctgtgcactctccgaaattacaaacctgtcccctgatatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagatataaaattagacccagaaaaactaacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgtgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgttaggtgaggcagcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gatcgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgttgactagacctagccctgacttttcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatttctgagatgtctaa +ctctagg---tttccagtgccgattgattccctgcacaccagcccaactgagaatattgttgtccagtgcca +aaacggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagattttcggggcaaagtcttcggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggagactt---tgaccaaaatcaaccaacaa---------------------------gatttaccccgg- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgcccccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctagttagatatgtcaaccctgacactggtagagtgttgtttgaggcaaagcttcacaa +attaggcttcatgactgtagctaagaatggtgactccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattggctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggcaaatgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttctttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaagctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccgagtgccacatccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacaccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgagccta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggattgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attagatttga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>MW661277.1/1-7600 |Norovirus GII isolate BMH19-125 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgggagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagagccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtggggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggcccttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgatactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tc-------------tattta +g-gatgaattga-tttt---actttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa------------------------------ +- +>MW661278.1/1-7605 |Norovirus GII isolate BMH19-127, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagagcaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactaagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacctggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaaattggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +cgatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactcgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattagaccctgaacagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atttttaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctaccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +aactgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaatcacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaa------------------------------------------------------ +- +>MW661279.1/1-7551 |Norovirus GII isolate BMH19-128 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagagcaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactaagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacctggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaaattggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +cgatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactcgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattagaccctgaacagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctaccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +aactgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaatcacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------ta--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW661280.1/1-7598 |Norovirus GII isolate BMH19-129 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-ggcgcttccgctgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagagcaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactaagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacctggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaaattggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +cgatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactcgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattagaccctgaacagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctaccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +aactgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaatcacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>MW661281.1/1-7600 |Norovirus GII isolate BMH19-130, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaaaccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---cagaagaatgattcagagaacaacaggcttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgactg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggtttttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaggacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggatgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaagtggaagacacagaaga--------gatggccaaccaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgcatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgctaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaaggtacatactgtggcgcgccaatcttgggcccagggggcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +actgataaagtttatggtaaggtcaagaagaggcttctgtggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaagggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaattaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacagacttcctttcaacatgacaaagagatgctccag +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggtgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgt---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccatgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaa------------------------------------------------------ +- +>MW661282.1/1-7603 |Norovirus GII isolate BMH19-132, complete genome +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagagcaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactaagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacctggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaaattggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +cgatcaggaacgtgaccatcaagaggtgccgaatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactcgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattagaccctgaacagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggcg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctaccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +aactgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaatcacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----acccaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------tagt---gtctttttaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>MW661283.1/1-7577 |Norovirus GII isolate BMH19-137 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcctaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggttaacacagcattcagcgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtagtgtacactccac---aatacctcatcccccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +caggcccataaaagacctcataggaaaaatcaaaccattaaacgtattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgagctagccatggtgagggctatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggaaaaactcatctggccag +ggaggtggcgagaaaggtggcatccactctcacaggggaccaaagagttggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaacttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcagggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaacgaaaggaagagaggaccacattagggctagtaacgggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gctcgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccgccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgttcgaaagaatgaattctggaatggtgagaccttcactagtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaaaaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccccagcgtggtagatgtgggagacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgtacttctcaatggaactccatcgcacattgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgctaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagaattgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaaccacgaagaccccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagcaaaatc +agcaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttt +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgaggccatcccccgactttgatttcatattctt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacacaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttatggggaagattcaaggcatgctcacccaaa------------------- +-----ct-----acaaggacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agcact------cacaatgtacatctggcccccgctgtagctcccacctttccgggtg +aacaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagagttttgtttgaatgtaagctccacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggctatcaatcaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcact---------------------------------g +ccaggaa----------------gaac------taggg--------------atgt---------------- +------------------------------tgttcctgctcggggacccccc------------------ag +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ctttt----------c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>MW661284.1/1-7570 |Norovirus GII isolate BMH19-145, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtaccaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcgct-------------aaggctccc +agcagtga----------------tcagcactgtccaataattaagatcggacccaaaacattaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaaatcggaaactgtaattgggctaccagacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcggctataagcctcgcgacgatagagctcacccccatatccctatactg +gaggcctgtttacacccctc---actacctggtctgcccagacacactgaaaggtctcgctggtgagaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgagctcaatgacacgtggct +tag---cagaaaaagcatttccagaaccaccggcttctttaaaccgtaccagtcttggaacaggaaacctct +tccgaccgttgatgatggaaaaatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaagccattgaacttattacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aatgtcttttggaccccgcc +agacgtctccaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttagcagtaga +gcttgttcctgtagtcatgggtggcataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatactcaaattggt +catgaaatggttctttccaaagaaagaggagaaagccgagatggagaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgactctcctcaaggataaagacagtctcacggcctt +catgaaaaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgccagatccctcctgcacaaagctaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggtaaaacccatatggcgag +acacttggctaagaacatcgccaacaccatgagtggtgaccagagagttgggctcgttccgcgcaatggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgatagtgatgtcatcataatcacgaccaacctagtcaatcctgcacctctcgactacgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagagattgagaaggtta +aaagagatttccctggtcagcctgacatgtggaaagattacttcaaacaagacttttcccatataaagctaa +ctctagctcctcaaggcgggtttgacaagaatggtaacaccccgcacggcaagggcaccatgcgctccctca +cccaggggtccctgaccgcaagggttgcaggcctcgtccatgaaaggaaggatgagttccaactacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactagccgcagacaacaagt +atggaattatggagacaatgagagtaggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagggatgtaaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaaattgaggaccacacgtcacagaccgcaaatgaagtgggctcagcac +tcctcaggcttagacaagcaagggctagatattatgtcagctgcttccaagacctcgtttacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtggctcaagaca---gatgggagatagagcccaaggacacagaaccagagggcaagaagggcaagaaca +agaaggggagaggcaagaaacacacagccttctccagtaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagtcgcccgagcaacagaggaggacttttgtgaagaagaggaagccaagataagacaaa +gaattttccgcccaacgagaaagcaaagaaaggaggaaaggggggtacttggcttagtaactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggtaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctcat-caaaccttctgatcacaacaacacatgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaagcaaattcaaatccacaagtcaggagagttctgcaggtttagattcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgagggtaccgtctgttccatactcgttaag +aggcccacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggcggtcagatgggaatgcttctcacaggagcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgtcatctgtgccacccaagggcaagatggagaggcagtccttgagggaaatgaa +aaccttggtacctattgtggtgctccaattctgggccccggcaaagcgcctaagctcagcacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcctacctggggggtaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccatttacagagcccaggggc +aaaccacctagaccagcagttttagaggaggctaagaagacagtgatgaatgttctggaacagaccattgac +cctgccaaaccatggacttattcacaagcatgtgcttcactagacaagaccacttctagtggaagccctcac +catgtcaggaaaaatgaccattggaatggggagtcttttaccggtcccctggcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcacgtgcagcccgtgtacacggccgcgcttaaagatgagcttgttaag +actgataagatctacaagaagataaagaagagacttctgtgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaggcaagttgcatagcccttccatgcagggtggggatg +aacatgaatgaggatggccccatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgccatggaggtgatgg-taaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +atcctaactctgagcgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacaaaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcttgactttcctgcgcaggtcgatagcacgggacccagctggatggtttggaaagttggatcaagactca +atcctcaggcaattgtactggacaaggggacccaatcatgagaatccatacgagagcatggttccccactcc +cagcgagctactcagctcatggccctccttggtgaagcttcactgcatggtccccagttttacaagagagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggtcatggcacttgaaccggtggtgggagcatcaattgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtctcaccaaggaactcgcccgg +tgagatgctcctaaatcttgaattgggcccagaacttaacccctatttaagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcgt +ctttgccgctgtgccaccacatttccctgtggacaatattagtgcagcccagataaccatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaaaataca---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgcagagttctgactcgccccgctccagattttgaattcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtccaa +ttcccgt---tttcctgctgctatagatatgctttatactgatcccaatgaatcaatagttgtacagcctca +aaatggtagatgcacccttgatggtacgttgcaaggcactacacaattggtcccgacacagatttgtgcttt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgattcaatag--- +--actcccctcag--------agagcccgtg----------------atcacccg----------------- +----------ttgcatgtccaggttaagaatctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggccattgacttcaaaggcacagtgttcggagtggcaagtcaga---gggacgtctctgggag +-----tc---aagaacagggccactatgccacc--------cga-----------gctcatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------gattcactccag- +--------tgggtatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctactctggcaga-ttgacc------ctaaatatgaacctcgcccctgctgtttccccatccttccccggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtatgtcaaccctgacactgggcgcaatatctttgaggccaagttgcacag +agaagggttccttactgtggccaattctggaaacaaccctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctacacacttgcccccatgggatctggacaggggcgtaga---------ag +agcgc---------agtaatggctggcgccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcattaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccccgcggacgctgctagaggggctgttaacgctccaatgacaaaaatattggactggaatggt +acaagatattgggcacctaatagtatgaaaaccacaagctattcagg-acaattctctagcagccccgttca +ta-----------gatctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------gaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttccccttctactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagttttgtctg-------cagg--------aa +ctggggc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgattgggtcagaggaca +gaatgagaggcttagcccgttcatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacacataggcagcctctcttcgccc +atctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------cc-ctctttcc---tttttccttt +t------------ctct-----cttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MT233102.1/1-7468 |Norovirus GII isolate 197_GII.P17_GII.17_Aragauina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------c-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatgcc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagctttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaagtcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT233268.1/1-7485 |Norovirus GII isolate 245_GII.P17_GII.17_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcttagaactcaacgactcctggct +tag---caggagaatgattcaaagaacaactgggttcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaagttggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaataaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgaactgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------atatctcaaacctctggt +cgaaaccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggacccatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcgcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgat +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgatccgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tccttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcgaaactc +aaagaatatggccttaaacccactcggcccgacaagactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggcctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtacaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttattaaacctagagttgggccctgatttgaacccttatttggctcatctgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ctcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaaccgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +tgatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggcta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtagccctaatcaggtatgttaatcccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgatagagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgtaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaatacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT242490.1/1-6088 |Norovirus GII isolate 015_GII.Pg_GII.1_Araguaina nonstructural polyprotein (ORF1) gene, complete cds; and VP1 (ORF2) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgc------ggagaacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttatcactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaaattgat +catgaaatggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcgcttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccacctcgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcattacaactaatctggctaacccagcaccactggactatgt +caattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaaactga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagctccaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaagtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacctgaggtgcgctaggatcagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggcagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaagagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaagaggttgccatagccagggccactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaagaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatttggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatctgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgaaggcgaggccgtccttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggcccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacatcaccactcccacctggcacctatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aaaccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgataaaacgacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttaatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgaactcaaggcccactgtgtcacactccccatcagggtggggatg +aacacgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcctagcgttatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggcgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaactggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaattaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttcttttgcctttaccagatgttaggaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccagacttcctggcaaacatctacgga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT218311.1/1-7512 |Norovirus GII isolate 014_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgtcgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggagttggccattaccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttaaaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggttggtttggaaaactggaacagagttca +attctcagacaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcgtctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggcaaacatgatttggttattccccccaatggttattttaggtt +tgattcccgggtcaaccagttttacacgcttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT218322.1/1-7485 |Norovirus GII isolate 125_GII.P2_GII.2_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------gc----gacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gwcccgagagaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatw-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgttcagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagttggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatgggctgtatgtggaaaaagggcttgt +gttaggtgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatatctcctgacaccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgactcatggtt +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaagtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccattaaggacataattggcaaactcaaacccctcaacatcctaaatatcctggcctcatgcgactg +gacctttgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacggattggagatcctgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccacactattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaaactatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccagtcgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaatcgcctcaacactcacaggagaccaaagggtgggtctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgattacggkatgagcaaccccatcca +cgatgcactgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaatcccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttycccggycaaccagacatgtggaaggacgcctatcgccctgatttctcacatattaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgagagattagatgagtacgagttgcagggtc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcaggaatgtcacgaccatggatgaactcaagaagg +ctatcaaaaacatcataatcaggaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgttgttgagagggtgcagagcaccagcgtgcaaatcaacaatgagatcgctggtgcag +tgcatcaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acattcaaaatttatggt +ccagaccattaactgaagatgcagatga--------ggcaaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcagatgacatcaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaaggtctcagtgatgaggagtatgaagagtaca +aaaggatcagagaggagagaaacggcaaatactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgcgaagaagaagaggttaagattcgccaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ccagcctcttcataacatcaacacatgtcataccccaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctatatttacaaaaggggcaatgactacatagtcattggagttcacacagcagcc +gcycgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggcaacactcgagggtggtgat +aataaaggaacatactgtggggcaccaatcctaggccccgggaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagac +cccccacaaaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggttcccccac +cacgtgcgcaaraacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgactccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaagtgtatgggaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcttttggcggtttgatggacgaactcaaagcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacactccagatataggtaccactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttaccatcgggtgtcccttgcacctctcagtggaattccatcgcacattgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattagacccagaaaaactgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgatcatcagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcacccgcgaccctgcagggtggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatamtga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcacyggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctawtgaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgctggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +yaatcagaaagatgac---cccaaaatgagaattgtggcyatgctttataccccccttaggtctaatggttc +aggtgatgatgtgttwacagtctcctgwagggtgttaactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaacttgaatggatccccttttgacccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtattatctcccaaa---gagacaa--------- +-----ac-----asaatagccctggacataatg----aaccagc----aaacaggggacacgatgctgtggt +ccctacttacacagcacagtatactccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagara--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgacct--------------------------------------- +------------------------------tcagcacacccaaagccggcch---------------acgag +tggctctt-----------ctgta------------tcctcctttgccactcagtcttcgaggccaactttg +gccacaaccactgggt-----cctcacttgg------tacagcttcatc----------aaattcg------ +-------------------------------actcgcagtactaacctctcccaatcaacagtttccagagc +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT221253.1/1-7476 |Norovirus GII isolate 012_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacaaaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttctc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcattttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagacactaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcatg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcacgagagaagagacgagtttcagctccaaggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaagaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aagtcgccggagcttcattcgttgtca---------------acagga------tctcgaaaaggtactgct +gggagagatgggtcaaaccaaccgaaac-------------ccaggaaatgattgcatccga-----aaagg +aagttgcccttctta---ccttctggtttgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttc +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgtagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgccatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtgataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtattggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttctacaagaaagtt +agcaagatggttattaatgagatcaaaggtggtggtctggaattctacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcccgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcggcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---cccaggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcatgtaca +acatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccatccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcctga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccctcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT221254.1/1-7404 |Norovirus GII isolate 084_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacccccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttttggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaagaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgaaatcaaacagattcagatccataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggtcgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcagtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +tagtcagggaaatacc---cccaggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtataccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacagcctaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggagcgagtgggaattgcctga +acattatggtcac-ttcact------cttaatatgaatttggcccctgcagtcgccccagctttccctggtg +agcgcattctctccttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgtctcataccacaggaatgggttcagcatttctaccaggaggccgcttcatcaga +ggccgcggtcactcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aagttaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +a----------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT221255.1/1-7492 |Norovirus GII isolate 085_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacaaaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttctc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcattttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagacactaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcatg-ctccagaagggtcgactttttggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcacgagagaagagacgagtttcagctccaaggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aagtcgccggagcatcattcgttgtca---------------acagga------tctcgaaaaggtactgct +gggagagatgggtcaaaccaaccgaaac-------------ccaggaaatgattgcatccga-----aaagg +aagttgcccttctta---ccttctggtttgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttc +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcaggttcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgtagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgccatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtgataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtattggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggcccttctcagtgaggcctcactgcatggtccccagttctacaagaaagtt +agcaagatggttattaatgagatcaaaggtggtggtctggaattctacgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcccgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcggcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +tagtcagggaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcatgtaca +acatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccatccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggaacgagtgggaattgcctga +acattatggtcac-ttcact------cttaacatgaatttggcccccgcagtcgccccagctttccctggtg +agcgtattctctccttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcataccacaagaatgggttcagcatttctaccaggaggccgcttcatcaga +ggccgcggtcactcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaattgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccctcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atatgcgcaggcgaggggagtcaca--------gatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT227816.1/1-7505 |Norovirus GII isolate 072_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgcccaacagttaaggtcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatactggagatgtgggatggtgaattctaccactactccgtgtacgttagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagccttgcaacaatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtcttttggactccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctgtccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaggaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagacttccctggccaacctgacatgtggaaagattgtttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggtggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaagggg +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggccgcagacaacaggt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtaaagttcaaagagtgtgaaataatttacaagaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaacctaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtggctcaaggta---gatgggagatagagcccaaagacacagaaccggagggcaagaagggcaaaaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagtcccggtcttgacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttttgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggctcaaggaactcttt +ggggtcgaaatcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgagggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcccaaactcagcacaaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggcacatatgaacctgcttatctggggggcaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcactgagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctagcagaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gctagggcttttggcggtcttatggacagtatgaaagcgagttgtgtagcccttccatgcagagtagggatg +aacatgaatgaggatggccccatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcgacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaggcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcagacaattgtactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagagagtc +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcgccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccgcacttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaatagattcttccatta +caaccaagaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcctaatgaatcaatagttgttcagcccca +aaatggtagatgcactcttgatggcacgttgcaaggcacaacacaattggtcccaacacagatctgtgcctt +tagag-----------------------------------------gtaccctgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgactcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacgcagtatgacccaacagatgacatccctgc +agtccttggggccattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcacgaagcacacat +tgatacaactgacccaaagtatgcacctaaattaggcacagttctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgata---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctgaatatgaatcttgcccctgctgtttccccatccttccctggcg +aacgaatccttttctttaggtctatagtaccat------cagctgggggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtacgtcaaccccgacactgggcgtaacatctttgaggccaagttacacag +agaagggttcctcaccatgtctggagctggaaacaactctattgtggttccccctaatggttattttagatt +tgaagcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtagg---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggcgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttgcaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggattggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-gccatcttgtagcacccctgtaca +ta-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaggtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------gtccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacgcataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aattta--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT227832.1/1-7464 |Norovirus GII isolate 086_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaacgg------tgaagac------actgta +caatttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatactagagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccttacacggccttcagcaacaattgctacaacttctgctgctgggtgctcgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccaatcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtctttcggaccacacg +agacaactctaccgccaagtcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcatccgctgcatcaacactgcgggcgtgtaaggacttagggaactatgcccttgacatacttaaattggt +catgaaatggtttttcccaaagaaagaggagaaggccgagatggaaaccttgagggcgattgaggacgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatttggaagaagagaaagcaaggaaactatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagctaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcatacaggggagagagggtggtcttgtgggatgattacggaatggggaaccctgtcaa +agatgctttaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggattgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtttatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtgaagttcaacgagtgtgacataatttacaagaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgataaagttgaggaccacccgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aagttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccgaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctctagcaaaggcctaagtgatgaagagtatgatgagttca +agaggatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagtcccggtcttgacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggaggccagacgattttcagccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagttccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcagatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggtgctcctgagggcactgtctgctctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagtacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctggggggtaaggatccc +agagtggacaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagcccagcagttttagaagaggctaaaaagacagtgatgaatgtcctagaacagaccattgac +cctgctaaaccatggacttactcacaagcgtgtgcttcactggacaagaccacctctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcagaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagctgtatatccctcccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctggatgttggtgatttt +gtcatctcagtccaggagggcctgccttcaggagtcccatgcacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctttcaccagacgttgtccaagctcactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agagagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttgggaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaaccatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcgttgcatggtccccagttttacaagaaagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagctagaaccagtgcttctacccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagactcgtggccatgctctacacgccgctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgacccgtcctgccccagattttgaattcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcaagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------cgagcccgta----------------atcaccct----------------- +----------ttccacgttcagctcaagaacctggatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaagggtacagtattcggagtggcaagccaga---gggacgtctctggaac +-----ac---aagaacagggccactatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtacgcacctaaattaggcacaattctcat---ca---------aatctgaatc +taccgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgacg---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttagatctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgcctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcagcatggctggagctctacgcccctgtataccagatccccatgggggcaattatagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcggt-gccatcttgtgccattccagtcca +ca-----------ggtctcctgctccccttcaacacaccgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccaccgtttcttcac----------------- +---------------------aatcaactta---ttcaacagtgttgactg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtccaggaccagtgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtggcgag +ggctgttttgga-ctcctggaacgctaagt------------tcaatacgcataggcagcct---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT233269.1/1-7281 |Norovirus GII isolate 247_GII.P17_GII.17_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------------------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcttagaactcaacgactcctggct +tag---caggagaatgattcaaagaacaactgggttcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaagttggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaataaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgaactgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------atatctcaaacctctggt +cgaaaccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggacccatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcgcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgat +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgatccgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tccttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcgaaactc +aaagaatatggccttaaacccactcggcccgacaagactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggcctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtacaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacctagagttgggccctgatttgaacccttatttggctcatctgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcccaac---agccgcatgagattagtggctatgctctataccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ctcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaaccgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +tgatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggcta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtagccctaatcaggtatgttaatcccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgatagagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgtaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaatacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT242482.1/1-7467 |Norovirus GII isolate 082_GII.Pg_GII.1_Ananas nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatt-------aaaaagattcc +acc-----------------------------tcccccgcccaacgc------ggagaacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggtctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttatcactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcaggaatagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaaattgat +catgaaatggttcttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcgcttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccacctcgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgatcactgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcattacaactaatctggctaacccagcaccactggactatgt +caattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaaactga +tgttggctcctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagctccaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaataagt +acgggctggtggacaccatgagagtgggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaagtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacctgaggtgcgctaggatcagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggcagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaagagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaagaggttgccatagccagggccactgaagaggacttctgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcagaaa +tcaggaagaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatttggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatctgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgaaggcgaggccgtccttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggcccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacatcaccactcccacctggcacctatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aaaccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcatcccttgataaaacgacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttaatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgc +gctcgagcgttcggagggttgatggatgaactcaaggcccactgtgtcacactccccatcagggtggggatg +aacacgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagctgcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcctagcgttatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacagccaaacta +aaagagtatggtctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggcgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaactggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggccctgaattaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggtaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggca---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcaa-----atcca--------- +--atggtgccattgactgtctactccctcaggaatggatccagcatttctatcaggaatcagccccgtcacc +cacagacgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +gcaggggttcattacagtagcaaattctggttctagacctattgttgtcccccctaatggctattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagcctcc---------------------------- +------acacctatatc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT242487.1/1-7372 |Norovirus GII isolate 190_GII.Pg_GII.1_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggaattaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggcctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gaggccagtgtacacccctc---agtacctcatatccccagaaactctcaaaaagttacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcattattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcgggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtgccagtagtgatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagatctcggagcatatggattggaaattctaaagttggt +catgaagtggttcttcccgaagaaggatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgacaaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagccaggaaactctccaccaaatctgcttctcctgatattgt +gggcactatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggggaccagagggtaggcctcatcccacggaatggtgt +cgatcactgggacgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagacctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggtaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaacaagt +acgggctggtggacaccatgagagtaggaagccagctcaagaatgtcaagaccgtgtcagagcttaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacttgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagatgatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaggaatacctccaagatagagacaagtac---t +atgaggaggttgccatagccagggccactgaagaggacttttgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcggaaa +tcaggaaaaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccactcatgtcatacctcaaggggcacaagagttcttc +ggtgtatccatcaaacagatccaaattcacaagtcaggtgagttctgccgactaagattcccaaagccaatc +agaactgatgtgacaggcatgatcctagaggaaggggcccctgaaggcaccgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtactacacca +ggtgattgtggatgcccatatatctacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacagcaccactcccgcctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaagggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaattattaacgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcctcccttgataaaacaacctctagtggctatccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgt +gctcgagcgttcggagggttgatggatgagctcaaggcccattgtgtcacactccccatcagggtggggatg +aacatgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagcttcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtgacagatctatctcctgacatcatccaagcaaactcacttttc +tctttctatggtgatgatgaaattgtgagcactgatattaaattagatccagaaaggctaacagccaaacta +aaagagtatggcctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaaccatgaagacccctctgagacaatgataccacattct +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagttttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcacttccctcttgagaatctaagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttcttttgcctttaccagatgttaggaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcacaacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcctggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttaggatctgtggttttgggca---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------tcggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +gcaggggttcattacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgtgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--cagacctagttctt--ctgcttctactgtttctacccgctcaacaattattag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtggtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT256116.1/1-6718 |Norovirus GII isolate 017_GII.P16_GII.3_Nova_Olinda nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) gene, complete cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacatttgccggaatagtggagtctctgatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtctggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaaccctgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaagtctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaagtttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atactgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttggaactgggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---aggaaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagatcacaatgtgtcctcatgt +gattgtggatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttctttcatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgtttttactgtgtcatgtagggtgttgactaggcccagtcctgatttctcattcaatttcct +cgtcccacccactgtggaatcaaagacaaaactttttaccctccctatcttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagagccagtgaccaaactgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactggacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacaccagattttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaact--------agg-----------gcacatgaggcaaagat +agacaccacatctggccgcttcaccccaaaattgggctccctagagatatcca---------ct---gaatc +tagtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ttattctggtcag-ttcacc------cacaacatgaatctagccccagctgtcgctcccaattttcccggtg +aacagctccttttcttccgctcacatttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcctggtcccccaggaatgggtccaacacttctaccaagaatccgcccctgccca +atcgcaggtggctctggtcaggtatgttaaccctgacactggtagggtgttatttgaggctaagctgcacaa +gctgggctacatgactatagctaagagtggtgattctccaataactgtgcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacatttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataa----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT256120.1/1-6724 |Norovirus GII isolate 080_GII.P16_GII.3_Palmas nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacatttgccggaatagtggagtctctgatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtctggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaaccctgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaagtctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaagtttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atactgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---aggaaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagatcacaatgtgtcctcatgt +gattgtggatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttctttcatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgtttttactgtgtcatgtagggtgttgactaggcccagtcctgatttctcattcaatttcct +cgtcccacccactgtggaatcaaagacaaaactttttaccctccctatcttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagagccagtgaccaaactgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactggacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattaggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccaaaatcaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------ttccaacaatggaccttacctga +ttattccggtcag-ttcacc------cacaacatgaacctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggtattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggttaggtatgtcaaccctgacactggtagggtgttatttgaggctaagctgcacaa +gctaggctacatgactatagctaagagtggtgattctccaataactgtgcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacatttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataa----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT227824.1/1-7464 |Norovirus GII isolate 011_GII.P7_GII.6_Araguaina nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaacgg------tgaagac------actgta +caatttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatactagagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccttacacggccttcagcaacaattgctacaacttctgctgctgggtgctcgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccaatcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtctttcggaccacacg +agacaactctaccgccaagtcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaaccttgctcgcatgct +gtcatccgctgcatcaacactgcgggcgtgtaaggacttagggaactatgcccttgacatacttaaattggt +catgaaatggtttttcccaaagaaagaggagaaggccgagatggaaaccttgagggcgattgaggacgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatttggaagaagagaaagcaaggaaactatccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagctaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcatacaggggagagagggtggtcttgtgggatgattacggaatggggaaccctgtcaa +agatgctttaacactgcaagagctagctgatacatgcccagtcactctaaactgtgacaggattgagaacaa +gggaaaaatgttcgacagtgatgtcatcataattacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtttatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtgaagttcaacgagtgtgacataatttacaagaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgataaagttgaggaccacccgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aagttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaaccgaccgaagc-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctctagcaaaggcctaagtgatgaagagtatgatgagttca +agaggatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagtccccgtcttgacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggaggccagacgattttcagccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagttccattgggcactggttggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcagatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggtgctcctgagggcactgtctgctctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcctaaactcagtacgaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggcacgtatgaacctgcttatctggggggtaaggatccc +agagtggacaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagcccagcagttttagaagaggctaaaaagacagtgatgaatgtcctagaacagaccattgac +cctgctaaaccatggacttactcacaagcgtgtgcttcactggacaagaccacctctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcagaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagctgtatatccctcccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctggatgttggtgatttt +gtcatctcagtccaggagggcctgccttcaggagtcccatgcacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctttcaccagacgttgtccaagctcactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agagagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttgggaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaaccatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcgttgcatggtccccagttttacaagaaagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagctagaaccagtgcttctacccctccccgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagactcgtggccatgctctacacgccgctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgtcccgctccagattttgaattcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcaagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctggatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaagggtacagtattcggagtggcaagccaga---gggacgtctctggaac +-----ac---aagaacagggccactatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgacccaaagtacgcacctaaattaggcacaattctcat---ca---------aatctgaatc +taccgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgacg---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctaaatatgaaccttgcccctgctgtttccccatccttccctggtg +aacgaatccttttctttagatctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgcctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcagcatggctggagctctacgcccctgtataccagatccccatgggggcaattatagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcagg-gccatcttgtagcacccctgtcca +ca-----------ggtctcctgctccccttcaacacaccgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccaccgtttcttcac----------------- +---------------------aatcaactta---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccaccgccacgt---------ccacagcaac +ctccac-------------------cct--------------gtccaggaccagtgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtggcgag +ggctgttttgga-ctcctggaacgctaagt------------tcaatacgcataggcagcct---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT229168.1/1-7464 |Norovirus GII isolate 025_GII.P7_GII.6_Palmas nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatactggagatgtgggatggtgaattctaccactactccgtgtacgttagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagccttgcaacaatagagctcacccccatatctctatactg +gaggcctgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgctgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacatctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactattc---aatgtcttttggactccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaaccttgctcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctgtccaccaaatcatcctcgccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaggaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcgag +acatttggctaagaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaatggggt +tgaccactgggacgcttacaggggagagagggtggtcttgtgggacgattatggaatggggaaccctgtcaa +ggatgctttaacactgcaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +aaagagacttccctggccaacctgacatgtggaaagattgtttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggtggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagaggaaggatgagttccagctacaagggg +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggccgcagacaacaggt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaagtcg +ccttgagagatgtaaagttcaaagagtgtgaaataatttacaagaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagaccgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctccaaaaggttctgtt +gggaaaggtgggttaaacctaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtggctcaaggta---gatgggagatagagcccaaagacacagaaccggagggcaagaagggcaaaaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagtccccgtcttgacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagaca +tcaggaagaggagaccagatgattttcagccaaaaggcaacctatgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttttgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggctcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgagggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +aaccttggcacctactgtggtgctccaattctgggccctggcaaagcgcccaaactcagcacaaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggcacatatgaacctgcttatctggggggcaaggatccc +agagttgaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcactgagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctagcagaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagagacttctgtgggggtcagaccttggtacgatgatcaggtgt +gctagggcttttggcggtcttatggacagtatgaaagcgagttgtgtagcccttccatgcagagtagggatg +aacatgaatgaggatggccccatcatatttgacaagcactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcgacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaggcccactcctgtttt +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctaacc +ggcctgactttcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcagacaattgtactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagagagtc +agcaagatggttatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaagcgccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccgcacttccctgtggataatattagtgcagcccagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaatagattcttccatta +caaccaagaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgacccgccctgccccagattttgaattcacattttt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgttgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gcaccctgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgattcaacag--- +--attccccccag--------cgagcccgta----------------atcaccct----------------- +----------ttccacgttcagctcaagaacctggatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggccattgacttcaaaggtacagtgttcggagtggcaagccaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcacgaagcacacat +tgatacaactgacccaaagtatgcacctaaattaggcacagttctcat---ca---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggtatgggtgata---------------------acaattggagacagtgggaattgcctga +ctactctggtaga-ttgact------ctgaatatgaatcttgcccctgctgtttccccatccttccctggcg +aacgaatccttttctttaggtctatagtaccat------cagctgggggctt------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +gtctgctgttgcactggttaggtacgttaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccatgtctggagctgtacgcaactgtatactggttccccctaatggttattttagatt +tgaagcttgggttaaccaattctacacacttgcccccatgggatctggacaggggcgtagg---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggcgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttgcaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggattggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctattcggt-gccatcttgtgccattccagtcca +ta-----------ggtctcctgctccccttcagcacaccgcccc---------------------------a +ccaa-------------------aaggtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgactg-------cagg--------aa +ctgggtc----g---tccag-------------------gtccaccgccacgt---------ccacagcaac +ctccac-------------------cct--------------gtccaggaccagtgactgggttagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtggcgag +gcctgttttgga-ctcctggaacgctaagt------------tcaatacgcataggcagcct---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT316113.1/1-7168 |Norovirus GII isolate 017_GII.P16_GII.3_Nova_Olinda nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaatagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacatttgccggaatagtggagtctctgatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtctggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcggtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atactgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---aggaaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagatcacaatgtgtcctcatgt +gattgtggatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttctttcatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgtttttactgtgtcatgtagggtgttgactaggcccagtcctgatttctcattcaatttcct +cgtcccacccactgtggaatcaaagacaaaactttttaccctccctatcttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagagccagtgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactggacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacaccagattttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccagaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ttattccggtcag-ttcacc------cacaacatgaatctagccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacatttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcctggtcccccaggaatgggtccaacacttctaccaagaatccgcccctgccca +aacgcaggtggctctggtcaggtatgttaaccctgacactggtagggtgttatttgaggctaagctgcacaa +gctaggctacatgactatagctaagagtggtgattctccaataactgtgcccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacatttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +ggatctttagttaatgcagg---agctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcttttaatcatgataaggagatgttaaat +gcacaagttgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctagattggagtgga +accaggtactgggcaccaaatgccacctccacaacctcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaa------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT316122.1/1-7545 |Norovirus GII isolate 080_GII.P16_GII.3_Palmas nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaatagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacatttgccggaatagtggagtctctgatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtctggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcggtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atactgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---aggaaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagatcacaatgtgtcctcatgt +gattgtggatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttctttcatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgtttttactgtgtcatgtagggtgttgactaggcccagtcctgatttctcattcaatttcct +cgtcccacccactgtggaatcaaagacaaaactttttaccctccctatcttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagagccagtgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactggacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattaggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccaaaatcaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ttattccggtcag-ttcacc------cacaacatgaacctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggtattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggttaggtatgtcaaccctgacactggtagggtgttatttgaggctaagctgcacaa +gctaggctacatgactatagctaagagtggtgattctccaataactgtgcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacatttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcttttaatcatgataaggagatgttaaat +gcacaagttgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacctcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaac------------ctgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------caggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-att-ctta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>MT158850.1/1-7506 |Norovirus GII isolate 3-GII.P7-GII.6 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaggaaaa----tgctgggtgccgtacccaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgacg----------caaaatcggaaactgtaattgggataccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactctgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgtccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgttgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaactaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaacagttgatgatggaaagatcaaaaaggttgccaacgcgatcctttgtgcgctcggttcgctgttctc +aaaaccaatcaaggatctgctaggcaagctcaaaccattgaacttactacacctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcggaactcttc---aacgtcttttggaccccgcc +agacgtctctaatttcatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgaaatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +tatgaagaccttggatctggaggaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaggaaat +gtttagcaggattagaccggtggttgttatgatctcaggcagacctggtattggcaagactcatatggcgag +acacctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctgaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacttagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctaggaggattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagagaaaggatgagttccagctacaagggg +atgccctccagacgtacaactttgacaccaatagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactctggaagatctgaaggtcg +ccttgagagatgtgaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcatattgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctaggtactatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccgg-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaggggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaaggaaagaggaaaggggggtacttggtttagtcactggttcagata +tcaggaagaggaggccagacgattttcaaccaaaaggcaacctgtgggcagacgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggctcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgctggaggaaggtgctcctgaaggcactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatggggatgcttctcacaggggcaaatgcaaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctgcagcaagttatgagagaccagctgaaaccattcacagaacccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgat +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtctttcactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgttcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagaaaataaagaagagactcctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggatcttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctaccatcaggagtcccatgtacgtcgcaatggaactcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcagttgtactggacaaggggacccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcggctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaactcaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggacaatattagtgcagctcagataactatgtgcccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataagaaacaggttcttccatta +caaccaggaaaacacc---ccccggatgaggctcgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattttaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacgctgcagggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------agatctaacag--- +--attccccccag--------agagcccgca----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggtacagtgttcggagtggcgagtcaga---gagacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +ccctgactt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggagaca---------------------acaattggaggcagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggttatatagactgcctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactggacgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctatcgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattttacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcattaatgcagg---tgctaacgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcaaatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacagctgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggatgctgctagaggggctgttaacgctccaatgacaaaaatattggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcatactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcag------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158851.1/1-7488 |Norovirus GII isolate 8-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccggtcatt +agatatgagg----------ttaa---gagtgggatctctggcctacctgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagcttacgccgttgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagatctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagatagcttagcaacata +catgaaaacactagacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggatgaggccagtagttcttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttctaggagaatcgatttcctggtgtatgctgaggcaccagatgtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaagacgccttcaagccggacttttcacatatcaagttac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggccgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgtcagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagagcacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagcttgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggctacattagggctagtaacaggctcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgagttttgccgatttagattcccaaaaccaatt +agaccagatgtggcaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggtaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagagtgggccctccctgcagcaggtaatgagagaccagttgaagccgttcactgaacccaggggc +aaacccccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccttgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgaaactatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctttttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaatttcgtccaggcccccaatggtgagttcacagtctctccccgaaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaacaacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgagattatatcagtgcagtgtca +aaacggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacctgaatgggtccccttttgatccctctgaggatatccctgc +ccctctaggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgccccagtgtttccaggag +agcgcctgctcttctttagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctactgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtactgggcaccaaactccatgaggaccacatcttattctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------atcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158852.1/1-7488 |Norovirus GII isolate 14-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacgacgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatatctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccagggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagggtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaatggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagtttcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaggccaggaggttgtccacaaaatctgcgtcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +agaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccggatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggcc +ccacaatcactacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaaattggcaatcaattaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccaaatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaatacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgtatcgcacgccgcatga------atatacaagaactctggt +cgaagccgcaact---agatcaaaatga--------atcagagaataaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaaagaaaagaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaaactgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggacttgggaacaacccct +ggtgactgtggttgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacactgtcatctgtgccacacagggaagtgagggtgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccgttcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctctagcgggcacccccat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaact-ggcacaaacagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgaggggcccctgatcatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---tttccagtgtccatagaccagatgtacactagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accat-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------agttcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggctctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgctccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagatccaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaaccctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaacagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158853.1/1-7488 |Norovirus GII isolate 21-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacagc +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +gag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgaacttgagagaaaatagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttataccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgctggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgtaga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaatcgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atgggttggtggatactatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcgtctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatcttaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcggagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcacaccgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggcagatgacaacaggagtgttgact +ataacgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtccctatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtggcaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttaggaacaactcct +ggtgattgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaacgaagggcttccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagcgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccattct +caaagacccgtacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaataaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagcctttcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagttagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------aacac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------gggcacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtta---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------ttcaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcacgaagcagccccttcaat +gagtgaggtgtccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcgtgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctggct----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------tacagcctcatc-----------aa--------at +tcaactcgc----agtacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158854.1/1-7491 |Norovirus GII isolate 25-GII.P12-GII.3 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatggc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctagcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgtcgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggccaacctgacatgtggaagaacgcatttagctctgatttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcttcagggctactccacgagaggttggatgaatacgagctacagggcc +caactcccaccacctttaactttgatcgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggactgctggacacaatgagagttggaaaacagctcaagggtgttaagaccatgtcagagctcaaacagg +cactcaaaaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccacagtgcagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgttaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aaccgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacagatat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagaaactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaagtcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactgggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgct +gcccgtggaggaaacactatcatttgtgccacccaagggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggcccaggaaatgccccaaaactcagcaccaagactaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctggaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggagcggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagattaaaaagaggcttctctggggttcggatctggcgaccatgattcgttgc +gctcgagcatttgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcactatgatgctgactac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaatctgtcccctgatattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgataaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactagaggccccaaccacgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcgctccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccgagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggagttgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaacaatttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggagatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaatcctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccaatgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattttagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagctcccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +gttaggttttatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgca +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggagatgttaaat +gcacagattgaggcaacaaagagattacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaaatgccacctctacaacttcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccctagatccacatccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtctgggtcgtctcgatcca--------------g +cgggccta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158855.1/1-7488 |Norovirus GII isolate 35-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaacacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aggaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggagaatggtacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgtcga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaagttggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccacactcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataatgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggttctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagatcgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggcgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tggatatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgaattcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcgtctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacattgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaacgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggtcagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158856.1/1-7488 |Norovirus GII isolate 43-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctttacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctagcaacgtgtgactg +gacttttgccggaatagtggagtctttgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actggaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtactgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaactggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agaccaaaatga--------atcagagactaaggaaggggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccccgggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtcggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccttgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagacattcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcacacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccctctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacactcggggaactttccaa +ttctagg---ttcccagtgcccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccagttttattctctcgcccctatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagatatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactctatgaggaccacatcttattctggaaaatttacatcaatc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccagtcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158857.1/1-7488 |Norovirus GII isolate 48-GII.P16-GII.2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaacgacgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatatctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaatggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaagattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcttatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcgtcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgctatctggcaagccaggaataggtaaaactcatctggccag +agaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcttacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaaattggcaatcaattaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagaataaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaag +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacaccgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaaaccgttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaactacctctagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaagtcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaacagccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggttggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttatgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccctctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggagctttccaa +ttctagg---tttccagtgtccatagaccagatgtacactagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaatccggacactggtcgggctctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgctccggtggtcgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagagtttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtactgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaaccctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaataaaaacttggaaccctacatgc---atggtgccttacagacagtctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158858.1/1-7509 |Norovirus GII isolate xbfx1926 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactgttcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattttgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagttggccaagaagattgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatataagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggcgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aaccttatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccgaagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggcgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158859.1/1-7509 |Norovirus GII isolate xbfx1927 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattggacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactgttcac +caggcccatcaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattttgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagttggccaagaagattgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatataagggcgaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggcgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aaccttatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccgaagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggcgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactccttttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158860.1/1-7495 |Norovirus GII isolate czzl05 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaatat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccaggaata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggatttttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattgggaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaaaccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacccttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaaaacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +aacgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaactcc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgctatagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctatactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgacccaccaggaagcagcggaaggaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgaaaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaatccacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgagggtgaagccactcttgaaggagatgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcagcaagttatgagagatcaactcaaaccttttacagagcccagaggg +aagccaccaaacccaagtgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactactggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggctctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggatctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggttcggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagttagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacactt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgaggttagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctttttaccgcccagaataatgtgttacaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggaatggtgagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------atcacccgttcagacagtgggaactaccaaa +ctactcaggggag-ctcacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +gtctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgagcgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggtcttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ttc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158861.1/1-7495 |Norovirus GII isolate CZZl11 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaatat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccaggaata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggatttttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattgggaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaaaccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcaatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacccttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaaaacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +aacgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaactcc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgctatagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctatactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgacccaccaggaagcagcggaaggaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgaaaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaatccacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgagggtgaagccactcttgaaggagatgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcagcaagttatgagagatcaactcaaaccttttacagagcccagaggg +aagccaccaaacccaagtgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactactggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggctctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggattccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggatctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggttcggaaagttggaccaaaactcc +atcctcacgcagttgtactggacaagaggacccaaccatgaagaccccagtgaaaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagttagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacactt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgaggttagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctttttaccgcccagaataatgtgttacaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggaatggtgagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------atcacccgttcagacagtgggaactaccaaa +ctactcaggggag-ctcacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +gtctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgagcgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggtcttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ttc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT158862.1/1-7492 |Norovirus GII isolate xbfx1917 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaaggacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggatgggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagacctcgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactcttacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcagagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccatttactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccccctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatacccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgt----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT228630.1/1-7503 |Norovirus GII isolate 175_GII.P4_GII.4_Palmas nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcactacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagttgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcctgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtacacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW559990.1/1-7443 |Norovirus GII isolate Hu/GII.4/P31/004/2019/KEN nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aaa---------------------cccccacgaccacccacgccagaattggtc-------agaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagtg----------ccaa---agatggcatttccggattgcctgagctcaccactgtcagccaacc +ggaagaaatcaacacggcgttcagtgtccccccgctcaatcaaagggagaacagggacgccaaggaaccact +gactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgaggaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtatacccctc---agtacctcatctctccagacactcttaggagactacacggagaatcatt +cccctacaccgcatttgacaacaattgttacgccttctgctgttgggtattagacctaaacgactcatggtt +cag---tagaagaatgattcagagaacaacgggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatcctcaatattctggctacatgtgactg +gaccttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggcttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcgtccgctgcatccactttgagagcttgcaaagacctgggtgcatacggactggaaatcttgaagttagt +tatgaaatggttcttcccgaagaaagaggaagcaaatgaactggccatggtgaggtccatcgaagatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaggatagcttggcaactta +catgagaaccctcgaccatgaggaggagaaagccagaaaactctcaactaaatctgcttcgcctgatatcgt +gggcacaatcaactctcttctggcacgaatcgccgctgcgcgctccctagtgcatcgagcgaaagaggagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccaggaatagggaaaactcatcttgccag +ggagttggccaagaagatcgcagcctccctcacaggtgaccagcgtgtaggtctaatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +tgatgccctcaggctacaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgacgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaggcgtg-ctcaaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +caactggctccctcatcgcccgagcatcaggactactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgctttcagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaggaccatgccagacctcaaacaag +cactcaagaatgtcgcaattaagaagtgccagatagtgtacaatggtagcacctatacgcttgaagccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaatgccaccgtgcagaccaacaatgaactggccggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgccctaagcccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaggaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaagaaaacaacgtaaggaagaaagggcctctctaggcttggtcacaggttcagaaa +tcaggaagagaaacccagaggacttcaaacccaagggaaagctgtgggccgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtacaaaggagttcttc +ggggtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcggctgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgccagagggaaccgtggtcacactgctcatcaag +aggccaactggagagcttatgcctttggcagccagaatgggaactcacgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcttgacagggtccaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgtccctacatctataaaagagggaacgactatgtggtcataggagtccatactgctgct +gcccgtggagggaacactgtcatctgtgccacccagggtagtgagggggaagccacccttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggtccagggagcgctccgaaacttagcaccaagactaag +ttttggaggtcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggcggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtattggaagccgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacgtgcggaaaaacgattgctggaatggggactcctttacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaagatttatggtaagatcaagaagaggcttttgtggggctcggacttggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgagctcaaggcacactgtgtcacccttccagtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatacaagtatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccaggtggttgcagaagacctcctttcccctagtgtaatggatgtaggtgacttt +cagatatcaataagtgaggggctcccctccggggtgccttgcacttcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcgctctctgaagtcacggacctgtcccctgatatcattcaggccaattcccttttc +tccttctacggtgatgatgagattgtgagtacagacataaaattggacccagagaagctgacagcaaaactc +aaggagtacggattgaagccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatttggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagctca +atcctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatctgaagcaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcactccacggcccagcattttatagcaaaatt +agcaaattggttattgcagagttgaaggaaggtggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatagcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcaccatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttttaccacta +caatcaatcaaatgac---cccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaagccattctctatcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggagaagttattcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttgtcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacaccgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cataatgtgcatctggcccccgctgtggcccccacttttccaggtg +agcagcttctctttttccgatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggattgtctcctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaacccagacacaggtagggttttgttcgagtgtaaactccacaa +atcaggttatgttactgtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcctcctttcaacatgacaaagatatgctccaa +gcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaggtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaacacaggccgcttttccacccct--------- +ca---------------------actatcgggggcacc---------------------------------g +tcaggaa----------------gagctaatattagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------aa +taaaactt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatttcgtatgtcaccccaccatctagtag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW559991.1/1-7443 |Norovirus GII isolate Hu/GII.4/P31/003/2019/KEN nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aaa---------------------cccccacgaccacccacgccagaattggtc-------aggaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagtg----------ccaa---agatggcatttccggattgcctgagctcaccactgtcagccaacc +ggaagaaatcaacacggcgttcagtgtccccccgctcaatcaaagggagaacagggacgccaaggaaccact +gactggaacaattatcgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtatacccctc---agtacctcatctctccagacactcttaggagactacatggagaatcatt +cccctacaccgcatttgacaacaattgttacgccttctgctgttgggtattagacctaaacgactcatggtt +aaa---tagaagaatgattcagagaacaacgggtttcttcagaccataccaggaatggaacaggaagcccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatcctcaacattctggctacatgtgactg +gaccttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggcttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcgtccgctgcatccactttgagagcttgcaaagacctgggtgcatacggactggaaatcttaaagttagt +tatgaaatggttcttcccgaagaaagaggaagcaaatgaactggccatggtgaggtccattgaagatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaggatagcttggcaaccta +catgagaaccctcgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcgcctgatatcgt +gggcacaatcaactctcttctggcacgaatcgccgctgcgcgctccctagtgcatcgagcgaaagaggagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccaggaatagggaaaactcatcttgccag +ggagttggccaagaagatcgcagcctctctcacaggtgaccagcgtgtaggtctaatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +tgatgccctcaggctacaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgacgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaggcgtg-ctcgaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +caactggctccctcatcgcccgagcatcaggactactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaggaccatgccggacctcaaacaag +cactcaagaatgtcgcgattaagaagtgccagatagtgtacaatggtagcacctatacgcttgaagccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaatgccaccgtgcagaccaacaatgaactggccggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgccctaagcccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttctcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaggaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaagaaaacaacgtaaggaagaaagggcctctctaggcttggtcacaggttcagaaa +tcaggaagagaaacccagaggacttcaaacccaagggaaagctgtgggccgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtacaaaggagttcttc +ggggtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcggctgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgccagagggaaccgtggccacactgctcatcaag +aggccaactggagagcttatgcctttggcagccagaatgggaactcacgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcttgacagggtccaacgccaaaagtatggacttgggcacaacacca +ggcgactgcggctgtccctacatctataaaagagggaacgactatgtggtcataggagtccatactgctgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggggaagccacccttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggtccagggagtgctccgaaacttagcaccaagactaag +ttttggaggtcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggcggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagccgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacgtgcggaaaaacgattgctggaatggggactcctttacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaagatttatggtaagatcaagaagaggcttttgtggggctcggacttggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgagctcaaggcacactgtgtcacccttccagtcagagttggcatg +aacatgaatgaagatggccccataatctttgagaagcactccagatacaagtatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccaggtggttgcagaagacctcctttcccctagtgtaatggacgtaggtgacttt +cagatatcaataagtgaggggctcccctccggggtgccttgcacttcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcgctctctgaagtcacggacctgtcccctgatatcattcaggccaattcccttttc +tccttctacggtgatgatgagattgtgagtacagacataaaattggacccagagaagctgacagcaaaactc +aaggagtacggattgaagccgacccgtcccgacaaaactgaaggaccccttgttatctctgaagatttggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagctca +atcctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcactccacggcccagcattttatagcaaaatt +agcaaattggttattgcagagttgaaggaaggtggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatagcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcccagccaggtcaccatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttttaccacta +caatcaatcaaatgac---cccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaagccattctctatcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggagaagttattcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacaccgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aacact------cataatgtacatctggcccccgctgtggcccccacttttccaggtg +agcagcttctctttttccgatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggattgtctcctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaacccagacacaggtagggttttgttcgagtgtaaactccacaa +atcaggttatgttactgtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcctcctttcaacatgacaaagatatgctccaa +gcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaggtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------actatcgggggcatc---------------------------------g +tcaggaa----------------gagctaatattagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------aa +taaaactt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatttcgtatgtcaccccaccatctagtag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW559992.1/1-7439 |Norovirus GII isolate Hu/GII.4/P31/005/2019/KEN nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aatggc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------atgtgctttctagcat +ggccatcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaactagtggtt +tcgtacagcg----------ccaa---agatggcatttccggattgcctgatctaaccactgtcagccaacc +ggaagaaaacaacacagcgttcagcgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactggaacaattattgagatgtgggatggagaaatctaccattacggtctgtacgtggaacgaggacttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtatacccctc---agtacctcatctctccagacactcttaggagactacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttctgctgctgggtgttagacctaaacgactcatggct +gag---taggagaatgattcagaggactacgggattcttcagaccataccaggaatggaacagaaaacccct +ccccactatggatgattccaaactgaaaaaggtagccaacatattcttgtgcaccctatcttcattgttcac +cagacccattaaggacataataggaaaagtgaaacctcttaacatcctcaatatcctggcctcatgtgattg +gacgttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccctactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccactttgagggcttgcaaagaccttggtgcatacggactagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccatgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggtacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagtaggtcgaggcctgttgttgtgatgatatcgggaaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcgcaggggaccagcgtgtgggcctgatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgttctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaagaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtttttgatagtgacgccataattattaccaccaatctggccaacccagcaccacttgattatgt +caattttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacccgacatgtggaagaacgctttcagttctgacttctcacacataaaactga +cactggctccgcagggtggctttgacaagaacggcaacaccccacatggaaaaggtgtcatgaagaccctca +ccactggctccctcatcgcccgagcaacaggattactccatgagaggctagatgaatatgaattgcaaggtc +cagccctcactaccttcaactttgatcgcaacaaggtacttgcctttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacaat +cactcaagaatgttgcgattaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgccggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccggcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtctcatccgatgacatcaagactgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaagccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaaacagatccaaatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagccagaatgggaacccatgcgaccatgaggattcaggggcgc +acagttggaggacagatgggtatgctcttgacaggatccaacgccaagaatatggacttgggcacaacacca +ggcgactgcggttgcccctacatttacaaaagagggaacgactatgtggtcataggggtccatacagccgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaattttgggcccagggagtgctccgaaactcagcaccaagactaag +ttttggagatcatccacaacgccactcccgccaggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcagaggtggcccttcactgcaacaagttatgagggaccagctaaaaccattcacagaacctagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccacac +cacatgcggaaaaacgactgttggaatggggagtcctttacaggtaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaggatgaattggtgaag +actgacaaaatttatggcaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggcacactgtgttacccttcctatcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccaggtataggtatcactatgatgctgactac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagtagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctctctcctagtgtaatggatgtgggtgacttc +caaatatcaataagtgagggactcccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctctgtgcactttcagaagtcacagacctgtcccctgacatcatccaggccaactctctcttc +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaactgacagcaaaactc +aaagagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgaccttcctccgaaggactgtgacccgtgacccagctggttggtttggaaaattggaacagagctca +attctcaggcaaatgtattggaccaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgtttaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaccctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cctactattaagttgatagcaatgctttatacaccacttagggctaataatgc +tggggacgacgtcttcacagtctcttgccgggtcctcacgagaccgtcccctgattttgattttatattcct +agtgccacccacagttgagtcaagaactaagcaattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatctcactcaca----------- +-----------ttgcaaa------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacgattatgacccaacagaagaaatcccggc +ccctctaggaactccagattttgtagggaagatacaaggagtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcgctgattttgctccaaaattgggtagaattcaatttcaaa---------ctgacacaga +ccgtgattt---tgaagctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccatcaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-gacacc------cccaatgtgcatttggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--atatgaatctggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtagctctgctgagatttgtgaatccagatacaggcagggttttgtttgaatgtaagcttcataa +gtcgggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacgcgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagtagtaacctacaacaggcttcctttcaacatgataaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggtggcact---------------------------------g +ccaggaa----------------gatctaatcttagggatac------------------------------ +------------------------------tgcccctgctcggggtccctct------------------ag +caaatctt-----------ctaat------------tcttctactgttgctt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggtac--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcctacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW559993.1/1-7443 |Norovirus GII isolate Hu/GII.4/P31/002/2019/KEN nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aaa---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagtg----------ccaa---agatggcatttccggattgcctgagctcaccactgtcagccaacc +ggaagaaatcaacacggcgttcagtgtccccccgctcaatcaaagggagaatagggacgccaaggaaccact +gactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgaggaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtatacccctc---agtaccttatctctccagacactcttaggagactacatggagaatcatt +cccctacaccgcatttgacaacaattgttacgccttctgctgttgggtattagacctaaacgactcatggct +aag---tagaagaatgattcagagaacaacgggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatcctcaatattctggctacatgtgactg +gaccttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggcttggtgctaggattcaccaaagagaaaattggaaagatgtt +gtcgtccgctgcatccactttgagagcttgcaaagacctgggtgcatacggactggaaatcttgaagttagt +tatgaaatggttcttcccgaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaagatgctgt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaggatagcttggcaaccta +catgagaaccctcgaccttgaggaggaaaaagccagaaaactctcaaccaaatctgcttcgcctgatatcgt +gggcacaatcaactctcttctggcacgaatcgccgctgcgcgctccctagtgcaccgagcgaaagaggagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaagaccaggaatagggaaaactcatcttgctag +ggagttggccaagaagatcgcagcctctctcacaggggaccagcgtgtaggtctaatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggctacaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaggcgtg-ctcaaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +caactggctccctcatcgcccgagcatcaggactactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaggaccatgccagacctcaaacaag +cactcaagaatgtcgcaattaagaagtgccagatagtgtacaatggtggcacctatacgcttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaatgccaccgtgcagaccaacaatgaactggccggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgccctaagcccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttctcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaggaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgtaaggaagaaagggcctctctaggcttggtcacaggttcagaaa +tcaggaagagaaaccctgaggacttcaaacccaagggaaagctgtgggccgatgatgacagaagcgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcggctgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagagggtgcgccagagggaaccgtggccacactgctcatcaag +aggccaactggagagcttatgcccttggcagccagaatgggaactcatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcttgacagggtccaacgccaagagtatggacttgggcacaacacca +ggtgactgcggctgtccctacatctataaaagagggaacgactatgtggtcataggagtccatactgctgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggggaagccacccttgaagggggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagcgctccgaaacttagcaccaaaactagg +ttttggaggtcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggcggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtattggaagccgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggactcctttacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaagatttatggtaagatcaagaagaggcttttgtggggctcggacttggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgagctcaaggcacactgtgtcacccttccagtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatacaagtatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccaggtggttgcagaagacctcctttcccctagtgtaatggatgtaggtgacttt +cagatatcaataagtgaggggctcccctccggggtgccttgcacttcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcgctctctgaagtcacggacctgtcccctgatatcattcaggccaattcccttttc +tccttctacggtgatgatgagattgtgagtacagacataaaattggacccagagaagctgacagcaaaactc +aaggagtacggattgaagccgacccgtcccgacaaaactgaaggaccccttgttatctctgaagatttggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagctca +atcctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggtgaggctgcactccacggcccagcattttatagcaaaatt +agcaagttggttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatagcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcccagccaggtcaccatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttttaccacta +caatcaatcaaatgac---cccactatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaagccattctctatcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttattcacgggtcccagcagcgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacaccgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgactt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctattcaggcaga-aacact------cataatgtacatctggcccccgctgtggcccccacttttccaggtg +agcagcttctctttttccgatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggattgtctcctcccccaagaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaacccagacacaggtagggttttatttgagtgtaaactccacaa +atcaggttatgttactgtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcctccttccaacatgacaaagatatgctccaa +gcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaggtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------actatcgggggcacc---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttccccc------------------aa +taaaactt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatttcgtatgtcaccccaccatctagtag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW559994.1/1-7445 |Norovirus GII isolate Hu/GII.4/P31/001/2019/KEN nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aaa---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagtg----------ccaa---agatggcatttccggattgcctgagctcaccactgtcagccaacc +gaaagaaattaacacggcgttcagtgtccccccgctcaatcaaagggagaatagggacgccaaggaaccact +gactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgaggaacggggtcttat +acttggtgtgcataagccgccggcagccatcagccttgccaaggtcgagctaacaccgctctccttgttctg +gagacctgtgtacacccctc---agtacctcatctctccagacactcttaggagactacatggagaatcatt +cccctacaccgcatttgacaacaattgttacgccttctgctgttgggtattagacctaaacgactcatggct +aag---tagaagaatgattcaaagaacaacgggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatcctcaatattctggctacatgtgactg +gaccttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggcttggtgctaggattcaccaaagagaaaattggaaagatgtt +gtcgtccgctgcatccactttgagagcttgcaaagacctgggtgcatacggactggaaatcttgaagttagt +tatgaaatggttcttcccgaagaaagaggaagcaaacgaactggctatggtgaggtccatcgaagatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaggacaaggatagcttggcaaccta +catgagaaccctcgaccatgaggaggagaaagccagaaaactctcaactaaatctgcttcgcctgatatcgt +gggcacaatcaactctcttctggcacgaatcgccgctgcgcgctccctagtgcatcgagcgaaagaggagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccaggaatagggaaaactcatcttgccag +ggagttggccaagaagatcgcagcctctctcacaggggaccagcgtgtaggtctaatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggatgactatgggatgagcaaccccataca +cgatgccctcaggctacaggagcttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgacgccataattatcaccactaatctggccaacccagcaccactggattatgt +caattttgaggcgtg-ctcaaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggaaaaggcaa +aacgtgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +caactggctccctcatcgcccgagcatcaggactactccatgagaggctagatgaatatgagttacaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctaatggacacaatgagagttggaaaacagctcaaggatgtcaggaccatgccagacctcaaacaag +cactcaagaatgtcgcaattaagaagtgccagatagtgtacaatggtggcacctatacgcttgaagccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaatgccaccgtgcagaccaacaatgaactggccggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgccctaagcccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaagctgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaggaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgtaaggaagaaagggcctctctaggcttggtcacaggttcagaaa +tcaggaagagaaacccagaggacttcaaacccaagggaaagctgtgggccgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggcacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcggctgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgccagagggaaccgtggccacactgctcatcaag +aggccaactggagagcttatgcctttggcagccagaatgggaactcatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcttgacagggtccaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgtccctacatctataaaagagggaacgactatgtggtcataggagtccatactgctgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggggaagccacccttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggtccagggagcgctccgaaacttagcaccaaaactaag +ttttggaggtcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggcggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctaaagccattcacagagcccagaggc +aaaccaccaagaccaaatgtattggaagccgccaagaaaaccatcattaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggactcctttacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaagatttatggtaagatcaagaagaggcttttgtggggctcggacttggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgagctcaaggcacactgtgtcacccttccagtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaaacactccagatacaagtaccactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagagccacactt-ggcccaggtggttgcagaagacctcctttcccctagtgtaatggatgtaggtgacttt +cagatatcaataagtgagggactcccctccggggtgccttgcacttcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcgctctctgaagtcacggacctgtcccctgatatcattcaagccaattcccttttc +tccttctacggtgatgatgagattgtgagtacagacataaaattggacccagagaagctaacagcaaaactc +aaggagtacgggttgaagccgacccgtcccgacaaaactgaaggaccccttgttatctctgaagatttggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagctca +atcctcaggcaaatgtattggaccaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcactccacggccccgcattttatagcaaaatt +agcaaattggttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatagcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tagttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggtcaccatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttttaccacta +caatcaatcaaatgac---cccactatcaagttgatagcaatgttgtatacaccacttagagctaataatgc +tggggatgatgtcttcacagtttcttgccgggtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaagccattctctatcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttattcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacaccgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgactt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aacact------cataatgtacatctggcccccgctgtggcccccacttttccaggtg +agcagcttctcttcttccgatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggattgtctcctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaacccagacacaggtagggttttgtttgagtgtaaactccacaa +atcaggttatgttactgtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcctcctttcaacatgacaaagatatgctccaa +gcacaaattgaagccaccaaaaagttacaacaggaaatgatgaaggtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------actatcgggggcacc---------------------------------g +ccaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------aa +taaaactt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatttcgtatgtcaccccaccatctagtag +accctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgc-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597111.1/1-7498 |Norovirus GII GII/Hu/ID/2015/GII.13[P16]/SOEP45 RNA, nearly comlete genome +-----------aagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgactttctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgctcgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaagagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +cagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------ag-------------ctttta +a--atgtgattttattt---tccttttaaaaaaa-------------aaaaaaaaaaaaa------------ +------------------------------------------------------------------------ +- +>LC597112.1/1-7542 |Norovirus GII GII/Hu/ID/2016/GII.17[P17]/SOEP83 RNA, comlete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttactttaaagaaag----cactcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttacagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcaagt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaacaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagagcttgagtggagagacttt +cccatacacggcctttgacaataactgttatgccttctgttgttgggtcttagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtattctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgataggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattgct +cgtgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggacccttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattactggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggagt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgagaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caattttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatacacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccaccgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggtaaatactcaatagaggaatatctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctttttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggggaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggtacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggttatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctccaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggaaagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaactcaaaccttttacagagcctagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgataagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacacgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatctatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaactgcatcacactccctgtcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactctacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagaaaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtaattagtgaggacctgaat +gggttgactttccttcgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtacagctcatggcactactaggagaatcctccctacatggaccctcattttatagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggagatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctttagccgcacccgttactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggacacttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaacggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccattgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaaccgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagctcccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagcctacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-ctcacc------ctgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgccttatgccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgcacactgtttgaagcaaaattgcacag +gtctggttacattactgtggctcactctggagactatcctctcgtcgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgacaaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ttc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------atctctagctccttcctcttcttctagc------------ag +t--gtcta-----------cagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcgaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------tcaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggct------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597113.1/1-7456 |Norovirus GII GII/Hu/ID/2016/GII.13[P16]/SOEP90 RNA, nearly comlete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagacatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggtc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaggcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaaccaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatact +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ttcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccctggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccagg---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtgtac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgttttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagctggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgacaaggagatgttgcag +gcccaaattgatgctacaaagaagctccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acgcgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +cagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------ag-------------ctttta +a--at------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC597114.1/1-7532 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/SOEP100 RNA, comlete genome +-------------------ggcgtctaac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgatttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccatgaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tct--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597115.1/1-7547 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/SOEP127 RNA, comlete genome +----------------------------------cttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcactcttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaggccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaagggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcgggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccaa- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacacc------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaa--------------- +------------------------------------------------------------------------ +- +>LC597116.1/1-7495 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/SOEP134 RNA, nearly comlete genome +-------------------ggcgtctaac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaa-- +-gaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgatcatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgatcttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaactatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactaggtagagtccaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------a +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597117.1/1-7525 |Norovirus GII GII/Hu/ID/2017/GII.13[P16]/SOEP249 RNA, comlete genome +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttctaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aat---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctataatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacactcagagcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccagtgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagagaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggatatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggcccgaatagcagcggccaggtcactagtccacagggccaaggaagaact +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcactggggaccaaagagttggactcataccaagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgactatgt +caactttgaggcctg-ttccagaagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaataacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgctggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggctcccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggcaacattggggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaattcccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacgtaaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccttctttctacagtaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacataataga +tccctggattatgaataactttgtgcaagcacctggtggtgaatttacagtgtcacctaggaactcccctgg +tgaagtgcttctaaatttagaattaggcccagaaataaatccctatctggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---ggggaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcacaaattacaatgtgtccccatgt +gattgtggatgtcaggcagctagagccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttctgat---tcgaggttgcgcttaattgcaatgctgtatacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtgttgactaggcccagccctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacttttcaccctccctatcttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctttgcataccagtccaactgacaacattgttgtccagtgcca +aaacgggcgcgtcacccttgacggtgagctaatgggcaccacccagctcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgaccaagctgacgcagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcatatacagctagacaacctaaatgggaccccgtatgatcctgcagaggatataccagc +tcctcttgggacgccagactttcggggtaaagtctttggcgtggccagccaga---gaaaccctg------- +----------------------acagtacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tgatgattt---tgatcaaaaccaaccaacga---------------------------aattcaccccagt +tgg---cattggagtt---------gataatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcact------cacaacatgaatctggccccagctgtcgcccccaattttcctggcg +aacagcttcttttcttccgctcacagttgcca------tcctctggtgggcg------gtcca--------- +--atggtatcctagactgcctggtcccccaggaatgggttcagcatttctatcaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaatcctgacactggtagggtgttgtttgaggctaagctgcataa +gctgggctacatgaccatagctaagagtggtgattctccaataactgtgcccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacactagcccccatgggaactgggaacgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttggttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatattta +cagaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctgcaagctgacatgattgctatcaaacagggggctttgaccgctggc +ggcttctcccccactgatgcagcccgcggggctattaacgcccccatgacaaaagttctggattggagtggg +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggtttcacaggacaa--------- +gc---------------------tgtgcacagagct---------ataccaaactttaaaaccaaccaa--- +gccccaa----------------aatccacacctagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ctaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttgcc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaactttaatttggaaccacacatgc---ctggatctctcaggacagcttttgttactccaccatctagcac +agcctct---agct------------------------------tggaca---cagtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-att-ttta-----aa------------tttggtt----------tg-------------taattg +g-atttaaa--------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC597119.1/1-7445 |Norovirus GII GII/Hu/ID/2015/GII.13[P16]/STM09 RNA, nearly comlete genome +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +cagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------ag-------------ca---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597120.1/1-7588 |Norovirus GII GII/Hu/ID/2015/GII.6[P33]/STM10 RNA, comlete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaagtcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacggccgcccaccccggagttaatt-------aaaaagattcc +acc-----------------------------ctccccgcccaacgg------ggaggacgatatagtggtg +tcctacagtg----------ccaa---aggtggtgtctccggtctgcctgaactatccaccgtcaggcagcc +gggtgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggacgctaaagaaccgct +gcctggcaccatcctggagatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagtcttgcaaaggttgaactagcaacactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccgggaactctaagaaaactacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggacgattccaaattgaagaaggtggctaatatagtcctgtgtgctttgtcatcattattcac +caggcccattaaggacataataggaaaactaaggcccttgaacatactcaacatactagcttcctgcgactg +gactttcgcaggaatagtggaatccctaattctccttgcagaactcttc---ggggttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggactggaaattctgaagttgat +cgtgaagtggttcttcccgaagaaagacgagacaaatgagcttgcaattgtgagatccattgaggacgcagt +gctagacctcgaagcaatcgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttagcaaccta +catgaagaccctggatcttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgacattgt +gggcacaatcaattcacttctggcacggattgcagccgcccgttccttggtgcatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaagacccaccttgccag +agatttggcaaagaaagttgcggccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaactgtgatagaattgagaacaa +agggaaggtctttgacagcgatgccataattatcacaactaacctggctaacccggcaccattggactatgt +caattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagctga +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatagacaccatgagagtgggaagccagctcaaaaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaatatttcaattagaaggtgccagatagtctatggtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtgagggttgataaggtgcaaagttcagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgagatgcgctaggattagatattatgttaagtgtgtccaagaagccttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggaag---agtttgtcatctcgtccgaagacatcaagcctgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgctatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcggcaga +ggattttcagaccaacaaggaaacaacgcaaggaagagagggtttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaagctcagctttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagtctctttataacatccacccatgtcatacctcaaggggcacaagagtttttc +ggtgtttccatcaaacagatccaaattcataaatcaggtgagttctgccgactaagattcccgaagccaatt +aggactgatgtgacaggtatgatcctggaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggcacccatgcaactatgaagatccaaggtcgt +actgtcggaggacagatggggatgctcctgacagggtccaacgccaagagcatggacttgggtactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaacgactacgtggtcatcggagtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaactcaaggaagtgagggcgaggccgtacttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaacgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacaacaccactcccacctggtacatatgaaccagcttacctcgggggcaaagacccc +agggtaaaaggtggcccctcactacagcaagttatgagagaccaactgaaacccttcacagaacccagaggt +aagccaccaaaacccagtgtgttggaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggttacccgcac +cacgtgcggaagaatgaacactggaatggggagtccttcacaggaaaattggctgatcaggcttcaaaagct +aacttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaagatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggttcagatctggcaactatgatccgttgc +gcgcgagcgttcggagggttgatggatgaactcaaggcccactgtgttacactccccatcagggtagggatg +aacatgaatgaggatggtcccatcatttttgaaaaacactctaggtacacctaccattatgatgcagattac +t-ctcgatgggactcaacacaacagagagctgttttagctgcagccctggaaatcatgg-taaaattttccc +cagaaccacacct-agctcagattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaagggctcccctctggggtgccttgcacttcacaatggaattccattgctcattgg +ctcctcacgctctgtgcactctctgaggtaacagatttatctcctgacaccatccaagcaaactcactcttc +tctttttatggtgatgatgaaattgtgagcacagacattagattagatccagaaaggctaacagtcaaacta +aaagagtatggtctcaagccaacccgccctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttgcggagaactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaatcatgaggatccctctgaaacaatgataccacactcc +caacgacccatacagttgatgtccctactaggtgaagctgcgctgcatggcccaacgttctacagcaaaatc +agtaaattggtcatatcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagaaccaatgttc +cgatggatgaggttctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgtcgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcagcaacga +gacgatggcacttgagccggtggctggggcctccatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttaaatttggaattaggccctgaattaaatccattcttggcacaccttgcaagaatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacggc---aggaaaactagt +gtttgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattactatgtttcctcatgt +aatcattgatgttagaactttagaacctgttctcttgcctttaccagatgttagaaataacttctttcatta +taatcagcaacctgag---ccccgtatgagacttgtggctatgttgtacacccctcttagatctaatggttc +tggtgatgatgtgttcacagtctcttgtagggtcctcactcgcccctctccagactttgattttaattattt +ggtccccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccatcggagaattgtcaaa +ttctagg---ttcccagtaccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gatcaccatc----------------------------------aatggaac----------------- +----------------ttacaggttacaaatgcaaatgggacttcatttgaccccactgaagatgtccctgc +accattgggcacgccggatttcctggcaaacatctacggagtcactagtcaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gctcatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggta---------cttgggaaga +aagtgatct---tgatctcaatcagcccacca---------------------------gatttacacctg- +--------ttggttt------------------gtatgacacaaaccactttgatcagtggattctacccaa +ttactctggaaga-ttgacc------ttaaacatgaatttggcaccctccgttgcccccctattcccaggtg +aacaaatacttttctttaggtcccacatgcca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctgctccctcaggagtggattcagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctatttgaggctaaattacatag +acaggggtttatcacagtagcaaattctggttctagacctattgttgttcctcctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcagggcttgccggtgatatagtcaccaatggcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgacaaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcaaacaaggggtattgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcagttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccacgaaaacaactgctttctccggcgggttcacaagctct--------- +cc-------------caataccaggactattgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acgcctgtgtc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttcttcga-------------- +----------ctagga-----gctc------------------ttc---------------------ccaac +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgttacaaactgcttacgtgacgcccccctctagtag +agcttcc---agca------------------------------atggca---cggtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaatacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------ttc-tttct----t-------------ctattc--------tt-tt-----------tgaaatt- +--------------tct---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa------------- +- +>LC597121.1/1-7589 |Norovirus GII GII/Hu/ID/2015/GII.6[P7]/STM37 RNA, comlete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaataccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttgggtttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacgttaacagtccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcatagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggtaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtttgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagtaacaactgttacaatttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgacgatggaaagatcaagaaggtggccaatgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgttgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttctagtttcatagcttccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcgtcaacactaagggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcgcggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatattggctaggatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaaggatcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgatatgtggaaggaccattttaaacctgacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaacttcgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaga +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtattggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctccttacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctataaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaagaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatctcggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctaccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggtctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattct +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +cgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcctctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccctgactttgagttcacgttctt +ggtgccaccaaccgtggagtcaaagactaagccctttacactccctattctgactcttggggagctgtccaa +ctcaaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcgattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtatttggggtcgctagccaaa---gaaacactacagggaa +-----ct---ctataggc---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacactacaaaccccagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccagtgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacaccggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgctccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaactaaggtcaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtaagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>LC597122.1/1-7416 |Norovirus GII GII/Hu/ID/2015/GII.13[P16]/STM45 RNA, nearly comlete genome +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggaatgagg----------ttaa---gagcggaatctctggcctgcccgagctcacaacagtccctcaacc +tgatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcggctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgcggttgggtattagacctcaaggactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaacaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggagtagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgcgctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggaccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacagcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaaaaactcct +gatgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaagacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggacccactttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggacagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgttttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagt--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597123.1/1-7478 |Norovirus GII GII/Hu/ID/2015/GII.6[P7]/STM52 RNA, nearly comlete genome +-------------------ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcatagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctttgtacgtcagcggtggtaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtttgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatcaccaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgacgatggaaagatcaagaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttctagtttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggcggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcgtcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tgtgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcgcggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatattggctaggatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaaggatcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgatatgtggaaggaccattttaagcctgacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataacttcgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcgaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggaggttgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaga +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gctcggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagtacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaagaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggtctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaatcgctgctcctgtcgtcggccaacaaaatgtaattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +cgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaaccgtggagtcaaagactaagccctttacactccctattctgactcttggggagctgtccaa +ctcaagg---ttccccgctccaatagacatgttgtacactgaccccaatgaggcgattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accaccct----------------- +----------ctccatgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggac +-----ct---ctataggt---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaacagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcac------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597124.1/1-7508 |Norovirus GII GII/Hu/ID/2015/GII.6[P7]/STM78 RNA, nearly comlete genome +------------agat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------acagcaccc +agtaccga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagtccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcatagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggtaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtttgcccagatacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccactggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgacgatggaaagatcaagaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttctagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcgtcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctccttaaggacaaggatagcctcgcggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatattggctaggatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtaaacctggcattggcaagacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcacccctcgattatgt +aaacttcgaggcgtg-ctccagaaggatcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgatatgtggaaagaccacttcaagcctgacttttcccacataaaattga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataatttcgatactaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgctcaagggtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccatggca---gatgggaggttgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaga +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcggaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aatcttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagtacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaagaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgttaggaaaaatgaccattggaacggggaatccttcactggccctctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcagatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccaacaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgtcgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggtctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagattaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +cgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaaggcagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaaccgtggagtcaaagactaagccctttacactccctattctgactcttggggagctgtccaa +ctcaagg---ttccccgctccaatagacatgttgtacactgaccccaatgaggcgattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctataggt---------gcaacc--------cgc-----------gcccatgaagtgcacat +tgacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccta- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgccttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcatatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaactaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtaagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597125.1/1-7526 |Norovirus GII GII/Hu/ID/2016/GII.3[P12]/STM92 RNA, comlete genome +---------------------cgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgctatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagaaaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctagacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagctaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccattggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgctggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgtcatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtctggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgtcggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaaggccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcaccctacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccagaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatattaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgttgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcgcccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacggcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaataa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgagacagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaaaac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcgatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggttg-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attgaatttg------ +-----------------------atttgga------------------------------------------ +------------------------------------------------------------------------ +- +>LC597126.1/1-7510 |Norovirus GII GII/Hu/ID/2016/GII.13[P16]/STM95 RNA, nearly comlete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcctagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaacgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactacttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtcttctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +cagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------ag-------------ctttta +a--atgtgattttattt---tccttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>LC597127.1/1-7566 |Norovirus GII GII/Hu/ID/2016/ GII.4Sydney2012 [P31]/STM137 RNA, nearly comlete genome +---------tgaagat---ggcgtctaac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcaaccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaagctcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattacaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaattcagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>LC597128.1/1-7487 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/STM150 RNA, nearly comlete genome +-------------------------taac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctggacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgttagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgttacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccagtgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcactccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597129.1/1-7501 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/STM171 RNA, nearly comlete genome +--------atgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggacggagaaatctatcattacggcctgtacgtgtaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgatcttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaacttcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaaaaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacataagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagcaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggatatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacattgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttgtcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agccgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597130.1/1-7489 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P31]/STM194 RNA, nearly comlete genome +----------------------------c-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgtaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccagagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggc +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgatcttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccgctggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cacttaagaacatcgcgataaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcttaaagcccaaa-- +--------gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaggaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacataagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtgggggaaacactgtcatatgcgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatattgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctatgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcataggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaaa +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctgttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccggc +ccctctaggaactccagattttgttgggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------cagacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccgggaa----------------gagtcaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccat------------------c +agccgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597131.1/1-7497 |Norovirus GII GII/Hu/ID/2016/GII.6[P7]/STM201 RNA, nearly comlete genome +-------------------ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------ccagcactgcccctcagttaagatcgggaccaagacgttaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaaatcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcatagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggtaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgacgatggaaagatcaagaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttctagtttcatagcttccctgataggtgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtacccgtggttatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcgtcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaatcctcctcaaggacaaggatagcctcgcggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcactattaatgccatattggctaggatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaaggatcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgatatgtggaaggaccattttaaacctgacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataacttcgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagaccttgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacgcagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaga +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagatgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaagaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catatcaggaagaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactggtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgattat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctaccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggtctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcttcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +cgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgtccccatgt +gattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaacagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtatacgccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccctgactttgagttcacgttctt +ggtgccaccaaccgtggagtcaaagactaagccctttacactccctattctgactcttggggagctgtccaa +ttcaaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcgattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccagctggtgcccacccaaatttgctcctt +taggg-----------------------------------------gcacgctaattagccag--------- +----------acatcgaggtct------gc----------------------------agattcaacag--- +--attcagccccg--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagattttaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctataggt---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccccagatacaccccaaagcttggctctgtattaat---gt---------attctgaatc +tgctgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccagtgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacaccggtagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactgggcaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctat-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtaagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC597132.1/1-7586 |Norovirus GII GII/Hu/ID/2016/GII.3[P12]/STM203 RNA, comlete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---ggatggcgtttctggtttgcctgaacttaccactgtccggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcttttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagagtggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatcgtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactagatgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtgccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattgtt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgattttccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagcttcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaaaaatgtcgcaatcaagagttgtcagatagtgtatggcggctgcacctataggcttgagtctgatg +gcaagggtgacgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ctaagccacaggtgggggatacagagga--------aatcgctagcaaggatggatgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgatatcaaaaccgagggcaagaaggggaagaaca +agtctggccgtggcaagaagcacacagcgttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggatagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaggccccgccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacacaaatcaggtgaattctgccgcctgaggtttccaaagccgatc +agaactgacgtaacaggcatgatcttagaagaaggtgcacccgaagggaccgtggccacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgattgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagctgcc +gcccgtggaggaaacactgtcatctgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggcacctatgaaccagcttacctcggcggcaaggacccc +agagtcaagggtggcccttcactacaacaagttatgagggatcaactgaaaccgttcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +catatgcggaagaacgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaataccattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtaggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgaccgcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaggttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagagacccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagctgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccttatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctccctatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgaaattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagggtgctgactagacctagccctgagttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcataccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtactcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccttgggtacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggcgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------agaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccggctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagctaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgaccatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcacgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacaccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaacccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgagtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>LC597133.1/1-7545 |Norovirus GII GII/Hu/ID/2016/GII.4Sydney2012[P16]/STM221 RNA, comlete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaaaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatactggcaacgtgtgattg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagtttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattacgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgacctagaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcggtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcgtatcttctaaggacatcaaggaggaaggaaagaagggtaaaacca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtaagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtggcaggaatgatcttggaagaaggtgcgcccgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaatccaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagctgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaggcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggcgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacaattaaccgccaagttg +aaggagtatggcctaaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcctatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggcgaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgtaagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaacctcaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtagctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccttaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaagaaactacagcaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaagg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatttt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT735394.1/1-7552 |Norovirus GII isolate Hu/NL/2017/ GII.4 Hong Kong[P31]/Zandvoort/0471 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aaaagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttatctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattgatc-------aaaaagatccc +ccc-----------------------------ccccccacccaacgg------ggaggatgaactagtggtt +tcctacagtg----------ccaa---agatggcgtttccggcctgcctgagctcactactgtcggacaacc +ggatgagaccaacacggcgttcagtgttcccccgctcaaccagagggagaatagggacgctaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatataccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagctttgccaaggtcgagctagcaccactttctttgtactg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggaggctgcatggagagtcatt +cccctacactgcatttgacaacaactgctacgccttctgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattaacagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactgtggatgattccaaattgaaaaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatcctcaatattctggccacatgcgactg +gaccttcgcaggcatagtggagtccttaatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactaggcgattatgaactgcaagggcctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaagatgtt +gtcatccgctgcatccactttgagagcttgcaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagtaagtgaattggctatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaataaccacatgaccgcattgctcaaggacaaagacagtctggcaaccta +tatgaggacccttgacctcgaggaggagaaagccagaaaactttcaaccaaatctgcttcacccgacatcgt +gggcacaatcaacgctcttctggcaaggatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctctagcaggctgagacccgttgttgtgatgatatcggggaagccagggatagggaagactcacctcgccag +agagctggccaagaagatcgcggcctccctcactggggaccagcgtgtgggtctcatcccgcgcaatggtgt +cgatcactgggatgcgtacaagggagaaagagtggttctttgggacgactatggaatgagtaaccccatcca +tgatgccctcagattgcaggaactcgctgacacctgtcccctcacactaaactgtgacaggattgagaataa +agggaaggtctttgacagtgatgctataattattaccaccaacctggccaacccagcgccactggattatgt +caattttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgatgtggaaaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgcgttcagtcctgatttctcacacctgaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggcgtcatgaagaccctca +ccactggctctctcatcgctcgagcttcaggtttgctccatgagaggctagacgagtatgaactacaaggcc +caactctcaccacattcaactttgaccgtaacaaaatccttgctttcaggcagcttgccgctgaaaacaaat +gtgggctggtggacacaatgaggattggaaaacagctcaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgtctctatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaatgaactagctggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggctctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcactaagcgcatga------acatacagaatctctggt +ccaggccacaggtggaagacacagaaga--------gacggctagcaaagatggttgcccaaaatctaaa-- +-gat----gatgaag---agtttgtcgttgcatccgacgacgtcaaaactgaaggcaagaaggggaaaaata +agactggccgtggtaagaagcacacagccttctcaagcaaagggcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaggagtaccttcaggacagggacaagtac---t +atgaggaggtggccatcgcaagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaggagagggcttctctcggtttggtcacaggctctgaaa +ttaggaagagaaacccagaagacttcaaacccaaggggaaactgtgggctgacgatgacagaagtgttgact +acaatgagaaactcagctttgaagccccaccaagcatctggtcacggatagtcaactttggttcaggttggg +gcttctgggtctccc-cctgtctgtttataacctcaacccatgtcataccccaagatgcaaaagagttcttt +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgaggtttccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcacccgaaggaaccgtggccacactactcatcaag +agaccaactggagaactcatgcctttggcagtaaggatgggaacccatgcaaccatgaagattcaagggcgt +acagttgggggacaaatgggcatgctcttgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgtccctacatttacaagagagggaatgactacgtggtcataggggtccacacggccgct +gctcgtggaggaaacactgtcatatgtgctacccaggggagtgaaggagaggccacactcgaaggtggtgac +aataagggaacatactgtggtgcgccaatcttgggcccagggagtgccccgaaactcagcaccaagaccaag +ttttggagatcatccacgacaccactcccacctggcacctatgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggtccctcgttgcaacaagttatgagggaccagctaaagccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccattatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcgtccctcgacaaaaccacttccagcggttatccacac +catgtgcggaagaacgactgttggaacggggattccttcacaggaaagttggcagaccaggcatccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcgcttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaaaaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacccttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaaacactctagatatagataccactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtactggcagcagcccttgaaatcatgg-ttaaattttctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +cagatatcaataaatgagggactcccctccggggtgccttgcacctcccaatggaattccattgcccattgg +cttctcactctttgtgcactctctgaagtcacggatttgtcccctgatattattcaggccaattcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaagctc +aaggagtacgggttaagaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacatagctggctggtttggcaaattggaacagagctca +attctcaggcaaatgtactggaccaagggtcccaaccatgaggatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtcactgctgggcgaggctgcactccatggcccggcattctatagcaaaatt +agcaagttagttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggcgccgctattgcggcacctgtggcgggccaacaaaatttaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcctttgggccccgatttgaacccttatctttctcatttggccagaatgtacaa +tggttatgcaggtggctttgaggtgcaggtaatccttgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttaccatgtttccccatgt +aatagtagatgttaggcaattagaacctgtgttgatccctttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggcaaataatgc +tggggatgatgtcttcacggtctcttgtcgggtccttacgaggccatcccctgattttgatttcatatttct +ggtaccaccaacagttgagtcaagaactaaaccttttactgtcccaatcctaaccgttgaggaaatgaccaa +ttcaaga---ttccccattcccttggagaagctgtatacgggtcccagcactgcttttgttgttcagccaca +aaatggtagatgcacgactgatggcgtgctcttgggcactacccagctgtctgctgtcaacatctgtacctt +tagag-----------------------------------------gagatctcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgcc----------------------------------aattcaca----------------- +----------------atgcgtctggcctctccgaactggaacaactatgatccaacagaagaaatcccagc +ccccctgggtaccccagatttcgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgc-----------ggccacaaagccatagt +gtccactggggctgccgactttgccccaaaatcaggcaacattcgattcggca---------ctgacacaga +agatgatct---ccaatctggcacaaacacga---------------------------aattcaccccaa- +--------ttggcgtcgtccaagatggtgaaaacccccactttagtgaaccccaacaatgggtgctcccaag +ttacacaggtaga-actgga------cataatatgcatttggcccccgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acttggatatagactgcttgctcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +gtcaggatatgttacagtagctcatactggtcctcatgatctagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgtat---------tataatggctggagctttctttgctggattagcatctgatgtccttggttctggactt +ggttccttaattaatgctgg---ggctggagctatcaatcaaaaagttgaatttgaaaacaatagaaaattg +caacaagctgctttccaatttagtagtaatctgcaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccactcaaaaattgcaacaaggtatgatgaaggttaagcaggcgatgcttctagaaggt +ggattctctgaaacagatgcagctcgtggggcaattaacgcccctatgacaaaggccttggattggagtgga +acaagatactgggcacctgatgctagggttacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------ggactaatcttagggctac------------------------------ +------------------------------tctccccactcggggttcttct------------------ag +tgtaactt-----------ctg---------------cttcttctgctactt-------------------- +----------ctgtgt-----attcaaataa------aactgtctcaac----------gag--------gc +ttggttc--------ttcagcaggttctggcaccagcgcctcaagcaccccgt------------------t +aactac---------------------------------------aaggaccaggagctgggttgaggatca +aaacagaaacttgtcacccttcatga---gtggggctcttaacacatcattcgtcaccccaccatctagcag +atcctcc---agtc------------------------------aaagca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atgtccgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctatc----------c-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN588299.1/1-7545 |Norovirus GII isolate HNV1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctagcat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tct-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaagccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgctaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccgccagcagccattagcttcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgccccattgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatctatcgaggatgcagt +actagatctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggtacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcaccgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccacggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaagtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgccttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgctcgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgctc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaatacccaaa-- +-gat----ggtgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcgtctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaaa +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgtgcatcccttgataaaaccacctccagcggccacccgtac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgattccagtctacacaggtgcacttaaagatgagttagtaaag +actgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaactccgtcccagaggtcaacaatga +ggttatggctctggagccggttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccaag +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaagtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagtaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatacccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcttctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggattacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgcc---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588300.1/1-7545 |Norovirus GII isolate HNV6 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcttccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcatgacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggccga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcgtctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacacactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagaataag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaacccttacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcacgcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-c-------- +---a-a-a-a-ttga-----ta-----t------cattc----------t-a-----a--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588301.1/1-7545 |Norovirus GII isolate HNV9 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagagaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcttccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcatccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgctcactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacctatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacttcgtcccagaggtcaacaatga +ggtcatggctctggagccgtttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaacccttacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588302.1/1-7545 |Norovirus GII isolate HNV13 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcgacctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcggccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatttctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatctatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttaacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatagctgctgcacgctctctagtgcatcgggcgaaagaagagct +ctccagcacgccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctctctcacaggggaccagcgtgtgggccttatccctcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagacgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgaaaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgctc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +agattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgttatatgtgccacccagggaaatgagggagaggccacgcttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaacaacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggcagaccaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaaatttatggtaaggtcaagaagaggctcctatggggctcagatctggcgaccatgatacgatgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggacgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagaaagactaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacttcgtcccagaggtcaacaatga +ggttatggctctggagcgcttgtttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccaag +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagatccaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccctgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgctc---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588303.1/1-7545 |Norovirus GII isolate HNV16 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaatacccccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcttccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcacgccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaagaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtccccagttatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaagtccctcccagaggtcaacaatga +ggtcatggctctggagccggttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccaag +tgaaatactatggagcgcgcccctgggccctgatctaaaaccctacttatctcatttggccagaatgtataa +ttgttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcaag------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccaacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagttaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagcacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgttactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588304.1/1-7545 |Norovirus GII isolate HNV20 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaatacccccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcttccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctatacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgagagagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcatcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttttatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaactccgtcccagaggtcaacaatga +ggtcatggctctggagccggttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcctctagaaacgctccaag +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgacttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctc------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588305.1/1-7545 |Norovirus GII isolate HNV21 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gaggcctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgatccagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaattgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcttccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcacgccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctctctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctatacacttgaggctgatg +gcaagggcagtgtgagagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaaaaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggccaccgaagaggacttctgtgagagagaagaggccaaaatccggcaga +ggattttcagaccgacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttttatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaactccgtcccagaggtcaacaatga +ggtcatggctctggagccggttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccaag +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaaccccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgacttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggattacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------catct----------c-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588306.1/1-7545 |Norovirus GII isolate HNV22 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatacttttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggccatggtgaggtccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcgagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgtatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacattaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtacctccaggacagagacaggtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtaataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagacagaattgggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacttgtacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgcgggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtgtatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatggtgcggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatagtcataagtgagggtctcccctctggggtgccttgcaccgcccgatggaattccatggcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggcgatgatgagattgtaagcacagatataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccagtccctcctcagaggtcaacaatga +ggttatggctctggagcccggtgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccaag +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcacttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +tagag-----------------------------------------gagatgtcgcccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaagttg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggacgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caagtctt-----------ttaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttct----------c-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN588307.1/1-7545 |Norovirus GII isolate QNV114 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgacgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gcgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +tccctacactgcgtttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtagagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggtttctcccacagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcactaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcaggtactatgttaagtgcgtccaggaggcactatattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagagaacctctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggatctgaaa +tcaggaagagaaacccagaagacttcaagcccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcattggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaaatgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaacaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggttaagaagaggcttctatggggctcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccaggtatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacggacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatcttgctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaacccttacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagacggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattggggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcgatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttct----------c-t-----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT742777.1/1-7501 |Norovirus GII isolate WT-NORO-0887 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------gccgctgttgcc------------aaaagc +a------ac----aacgacattgcaaaatcttcaagtgacg---------------gtgtgttatctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgtccacccacaccagaattgatc-------aaaaagattcc +tcc-----------------------------ccccccacccaacgg------ggaggatgaactggtggtt +tcctacagtg----------ccaa---agatggcgtgtctggcctgcctgagctcactactgtcggacaacc +agatgagaccaacacggcgttcagtgtccccccgcttaaccagagggagaatagggacgctaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatataccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcggccattagccttgccaaggtcgagctaacaccactctctttgtactg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggaggctgcatggagagacatt +cccctacactgcatttgacaacaactgctacgccttctgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattagcagaacaacaggtttcttcaggccataccaggattggaacaggaaacccct +ccccactgtggatgattccaaattgaaaaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacctattaaggacataatagggaagctgaaaccccttaacatcctcaatattctggccacatgcgactg +gaccttcgcaggcatagtggagtccttaatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtaatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcttgcaaagaccttggtgcatacggactggaaattttaaaattggt +catgaaatggttcttcccaaagaaagaggaagtaaatgaattggctatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaataaccacatgaccgcactgctcaaggacaaagacagtctggcaaccta +tatgaggaccctcgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaacgctcttctggcaaggatcgccgctgcacgttccctagtgcatcgggcaaaagaagagct +ctctagcaggctgagacccgttgttgtgatgatatcggggaagccagggatagggaagactcacctcgccag +agagctagccaagaagatcgcggcctccctcaatggggaccagcgtgtgggtctcatcccgcgcaatggcgt +cgatcactgggatgcgtataagggagaaagagtagttctttgggacgattatggaatgagtaaccccatcca +tgatgccctcagattgcaggaacttgctgacacctgtcccctcacattaaattgtgataggattgagaacaa +agggaaagtctttgacagtgatgctataattattaccaccaacctgaccaacccagcaccactggactatgt +caattttgaagcgtg-ttcgaggcgcattgacttcctcgtgtacgcagaagctcctgatgtggaaaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgatttctcgcacctgaaactgt +cattggctccgcagggtggttttgataagaacggcaacaccccgcatggaaaaggcgtcatgaagaccctca +ccactggctccctcgtcgcccgagcttcaggcttgctccatgagaggctagacgagtatgaactacaaggcc +caactctcaccactttcaactttgaccgtaacaaaatccttgctttcaggcagcttgccgccgaaaacaaat +atgggctggtggacacaatgaggattggaaaacagctcaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgtctctatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgacg +gcaagggcagtgtgaaagttgacaaagtgcaaagcgccactgtgcaaaccaacaatgaactagctggtgccc +tacaccacctaaggtgcgccagaattaggtactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcactaagcgcatga------acatacagaatctctggt +ccaggccacaggtggaagacacagagga--------gacggctaacaaagatggttgcccaaaacctaaa-- +-gat----gatgaag---agtttgtcgtcgcatccgacgacgtcaagactgaaggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaggagtaccttcaggacagggacaagtac---t +atgaggaggtggctatcgcaagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaagaaacaacgcaaagaggagagggcttctctcggtttggtcacaggctctgaaa +ttaggaagagaaacccagaagatttcaaacccaaggggaaactatgggctgacgatgacagaagtgttgact +acaatgagaaactcagctttgaggccccaccaagcatctggtcacggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgtttataacctcaacccatgtcataccccaaggtgcaaaagagttcttt +ggagtccccatcaaacaaatccaaatacacaaatcaggtgaattctgccgattgaggttcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacacttctcatcaag +agaccaactggagaactcatgcctttggcagtgagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttggaggacaaatgggcatgctcttgacaggatccaacgctaagagtatggacctgggcacaacacca +ggtgactgcggctgtccctacatttacaagagggggaatgattacgtagtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgctacccaggggaatgaaggagaggccacactcgaaggtggcgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccgaaactcagcaccaagaccaag +ttttggagatcatccacaacacctctcccacctggcacctatgaaccagcctacctcggtggcaaggacccc +agagtaaaaggtggtccctcgttgcaacaagttatgagggaccagctaaagccatttacagaacccagaggt +aaaccaccaaggccaagtgtgttggaagctgccaagaaaaccattgttaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaggcttgcgcgtccctcgacaaaaccacttccagcggttatccgcac +catgtgcgaaagaatgactgttggaacggggattccttcacaggaaaattggcagaccaggcctctaaggcc +aatctaatgtatgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaattggtaaag +actgacaaaatttatggtaagatcaaaaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacccttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaaacactctagatacagataccactatgatgctgattat +t-cccggtgggactcaacacaacagagggatgtactggcagcagcccttgaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttctcccagtgtaatggatgtgggtgacttt +caaatatcaataagcgagggactcccctccggggtgccttgcacctcccaatggaattccattgcccattgg +cttctcactctttgtgcactatctgaagtcacggacttatcccctgatattgttcaggccaattccctcttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaagctc +aaggagtacgggctaagaccaacccgccccgacaaaactgaagggccccttgtcatctctgaagatctggat +ggcctgacattcctgcggagaactgtgacccgtgacatagcaggctggtttggcaaattggaacagagctca +attctcaggcaaatgtactggaccaagggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctactgggcgaggctgcactccatggcccggcattctatagcaaaatt +agcaagttggtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgtaggcgccgctattgcggcacctgtggcgggccaacaaaacttaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcctttgagccctgatttgaacccttatctttcccatttggccagaatgtacaa +tggttacgcaggtggttttgaggtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgtttccccatgt +aatcgtagatgttaggcaattagaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgtcgggtccttacgaggccctcccctgattttgatttcatatttct +ggtaccaccaacagttgagtcaagaactaaaccttttactgtcccagtcttaaccgttgaggaaatgaccaa +ttcaaga---ttccccattcccttggagaagctgtatacgggtcccagtgctgcttttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttgggcactacccagttgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gagatctcacacaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgcc----------------------------------aattcaca----------------- +----------------atgcatttggcctctccgaactggaacaactatgacccaacagaagaaatcccagc +ccccctgggaaccccagacttcgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaaaacagatggctcgacc--------cgc-----------ggccacaaagccatggt +gtccactggggctgccgactttgccccaaaattaggcaacattcgattcggca---------ctgacacaga +aaatgatct---ccaatctggcataaacacca---------------------------aattcaccccaa- +--------tcggcgttgtccaagatggtgaaaacccccattttagtgaaccccaacaatgggtgcttccaag +ttacacaggtaga-actgga------cataatgtgcatttggcccctgctgttgcccccacttacccgggtg +agcaactccttttctttaggtccaccatgcccg------gactcagcgggta------cccca--------- +--acttgaccatagactgcttgctcccccaggaatgggtgcggcacttctaccaagaagcagctccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccataa +atcaggatatattacagtagctcacactggtcctcatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgcaga---------cg +tgtgt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttccttaatcaatgctgg---ggctggagctatcaatcaaaaagttgaatttgaaaataatagaaaattg +caacaagcttctttccaatttagtagtaatctgcaacaagcttcctttcagcatgacaaggagatgctccaa +gcacaaattgaggccactcaaaaattgcaacaaggtatgatgaaggtcaagcaggcgatgctcctggaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggccttggattggagtgga +acaagatactgggcacctgatgctagggttacaacatataatgcaggccgcttttccacctct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------ggactaacctcagggctac------------------------------ +------------------------------tctccccactcggggatcttct------------------ag +tgtaactt-----------ctg---------------cttcttctgctactt-------------------- +----------ctgtgt-----attcaaataa------aacagtttcaac----------gag--------gc +ttggttc--------ttcagcaggttctggcaccagcgcctcaagcaccccgt------------------c +aaccac---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacccttcatga---gtggggctctcaacacatcattcgtcaccccaccatctagcag +atcctcc---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atgttcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019956.1/1-7017 |Norovirus GII isolate 1048 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaacc +aga---------------------cccccacgaccacccacaccggaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggaagaattagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggagtggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggtatagtggaatccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaaaatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccattgaggacgcagt +gctagacctcgaagcaattgaaaacaaccacatgaccaccctactcaaggacaaagatagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaggaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgaccgcaacaagatacttgcatttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgccagaccttaaacaag +cactcaaaaatgtcgcgatcaagaagtgccagatagtgtataatggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaggaggaggaggccaaaataaggcaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaagggcctctcttggcttggtcactggctcagaca +tcaggaagagaaacccagacgacttcaaaccaaaaggcaaactgtgggcagatgacactagaagtgtggatt +acaatgaaaggcttgacttcgaggcgcccccaagtgtttggtcaagaatagtcccattgggcaccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcgcgaagactaag +ttttggcgctcgtcaccagatgccttgccgcctggcacgtatgaacctgcttacctgggaggcaaggacccc +agagtggaaaaagggccttccttgcagcaagtcatgagggaccaattgaaaccattcacagaacccagaggc +aaaccacctaggcctgcagttttagaagaggccaaaaagacagtgatgaatgttctggaacaaaccatcgac +ccaccccaaccatggtcctactcgcaagcatgtgcctcactggacaaaaccacctctagtggtcacccccat +cacgtcaagaaaaacgaccactggaatggagagtccttcaccggtcccttggcagaccaggcatccaaagcc +aacctcatgtatgagcaggctaagaacatgaagccagtgtatacaggtgcgcttaaagatgagcttgttaag +actgataagatctacaaaaagataaagaagaggctcctatggggttcggacctggcgacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctctcccatgcagggtagggatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaacccagcaaaggagcattctatctgcagcactggaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgacgtcaggaataatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccccttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccgca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacagttatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtagggaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaacccccaaagtgggtgctcccaag +ttactcaggcaga-aacacc------cctaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttcttttcttcagatctaccatgcccg------gatgcagcggggt------accca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccagtttagcagtaatttgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgatgccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgaca--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019957.1/1-7023 |Norovirus GII isolate 1089 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaacc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggaagaattagtggtt +tcttacagcg----------ccaa---agacggcgttttcggattgcctgagctcaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggagtggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcgcaggcatagtggagtccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggcttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccaccttaagggcttgcaaagaccttggtgcatacggactagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +gggtacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggtcgaggcctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaacgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactaagcaccaagacgaaa +ttctggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccttccggggtgccttgcacctcccaatggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccgca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttctctaaattggaacagttatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtagggaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcgccgattttgctccaaaactgggtagagttcaatttcaaa---------ctgacacaga +ccatgattt---tgaagctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aaacac------cccaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgataaagagatgctccag +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagct--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019958.1/1-7017 |Norovirus GII isolate 1137 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatggc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------atgtgctttctagcat +ggctatcacttttaaacgag----ctctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cctccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcatttccggattgcctgatctgaccactgtcagccaacc +ggaagaaaacaacacggcgttcagcgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactggaacaattatagagatgtgggatggagaaatctaccattacggtctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtatacccctc---agtacctcatctctccagacactcttaggagactacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttctgctgttgggtgttagacctaaacgactcatggct +gag---taggagaatgattcagaggactacaggattcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaaactgaaaaaggtggccaacatattcttgtgcaccctatcttcactgttcac +cagacccattaaggacataataggaaaagtgaaacctcttaacatcctcaatatcctggcctcatgtgattg +gactttcccaggcatagtggaatccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggcttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccaccttaagggcttgcaaagaccttggtgcatacggactagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +gggtacaatcaacgctcttctggcacgaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgaccgcaacaaggtgcttgcattcagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgccagaccttaaacaag +cactcaagaatgtcgcgatcaagaagtgccagatagtgtataatggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtttcat-ccaaccttctgatcacaacaacacatgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcttaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcaccaagacgaaa +ttctggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctaaaaccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggtaaattggcagaccaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaggatgaactggtgaag +actgacaaaatttatggcaaggtcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttggaggtctcatggatgaactcaaggcacactgtgttacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccaggtataggtatcactatgacgctgactac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagagccacactt-ggcccagatagttgcagaagacctcctctcccctagtgtaatggatgtgggtgacttc +caaatatcaataagtgagggactcccctccggggtgccttgcacctcccaatggaactccatcgcccactgg +ctcctcaccctttgtgcactctcagaagtcacagacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaactgacagcaaaactc +aaagagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgaccttcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacagagctca +attctcaggcaaatgtattggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagccccagccaggtcaccatgttcccccatat +agtagtggatgttaggcaattagaccctgtgttgattcccttacccgacgttaggaacaatttctaccacta +caaccaatcaaatgac---cccaccattaagttgatagcaatgctttatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgactttgattttatattcct +agtgccacccacagttgagtcaagaactaagcaattctctgttccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatctcactcaca----------- +-----------tcgcaaa------------------------------------------------ta---- +-------gtcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagatacaaggagtgctcacccaaa------------------- +-----cc-----acaagggcggatggctcaaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcgccgattttgctccaaaactgggtagaattcaatttcaaa---------ctgacacaga +tcgtgattt---tgaagctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccatcaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-gacacc------cccaatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgaca--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019959.1/1-7020 |Norovirus GII isolate 2049 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaaaaccaccc +aaa---------------------cccccgcgaccacccacaccagagttgatc-------aaagagatccc +tcc-----------------------------ccccccacccaatgg------ggaggatgaaccagtggtc +tcctacagcg----------ccaa---agacggcgtttccgggctgcctgagctcaccactgtcagacaacc +ggaagaaaacaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcggccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcgtt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccataccaggactggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcgctatttac +caggcccattaaggacataatagggaagctgaaacctctcaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggagtccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggcttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccaccttaagggcttgcaaagaccttggtgcatacggactagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +gggtacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggtcgaggcctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaggagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcacgaagactaag +ttttggcgctcgtcaccagatgccttgccgcctggcacgtatgaacctgcttacctgggaggcaaggacccc +agagtgaaaaaagggccttccttgcagcaagtcatgagggaccaattgaaaccatttacagagcccagaggt +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaactacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcacttgaaatcatgg-ttaagttctccc +cagaaccacatct-ggcccagatagttgcagaagacctcctttcccccagcgtgatggatgtgggtgatttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +cttctcactctttgtgcactctctgaagtcacggacctgtctcctgacattattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggatccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatatctgaagacctggat +ggcctgactttcctccggagaactgtgacccgtgatccagctggttggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcacttcatggcccggcattttatagcaaaatc +agcaaactagtcattgcagagttgaaggaaggtggcatggacttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcctgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaggcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaacccctacctatcccatttggccaggatgtacaa +tggttacgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---tccacccttaaattgatagcaatgttatatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgagtcctcacaagaccatcccccgattttgatttcatattctt +ggtgccgcccacagttgagtcaagaactaaaccattctctgtcccaattctaaccgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgaa----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaaattaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaatgagccccaacagtgggtgctcccaac +ttactcaggcaga-aaaaca------cttaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttcttttcttcagatctaccatgcccg------gatgcagcggtgt------accca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccagtttagcagtaatttgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgatgccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaa------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW045405.1/1-7020 |Norovirus GII isolate 1065 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaacc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggaagaattagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggagtggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggtatagtggaatccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccactttgagagcctgtaaagatcttggagcgtacggactggaaattttaaaattagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaactctcttcttgcacgaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccatcttgccag +ggagttggccaggaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcatttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgccagaccttaaacaag +cactcaagaatgtcgcgatcaagaagtgccagatagtgtataatggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccaaaaccaatc +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaag +aggcctacaggtgagatgatgcccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgactttgttgtcgctggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgaaggaggtgag +gaccgtggcacctactgtggcgccccaatcctgggccctggcaaggcgcccaaactcagcaccaagacgaaa +ttttggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggacccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagttaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaactacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tgaggttctctg +ctgagccacaatt-ggcacagatagtggctgaagacctgctctcaccaagtgtggttgatgtgggtgatttc +aaaattacaatcaatgaaggccttccatccggcgtgccctgcacgtcccagtggaactcaatctcccattgg +ctactcacattgtgtgccttatctgaagtgacaggactaggtcctgacatcatacaggccaactccatgtac +tccttctatggtgatgatgaaattgtgagcactgacataaaattggacccagagaaattgactgcaaagctc +aaagagtatggcctcaagcccactcgtcctgacaaaactgaggggccactggtgattagtgaagacttgaac +gggttgacattccttcgtcgcactgtgacccgtgatccagcaggctggtttgggaaactagaacaaagttcc +atcctaagacaattgtactggacaaaagggcctaatcatgaagatcctagtgaaactatgataccacatgca +cagaggcccgtacaactcatgtcactactaggggaagcctccctacatggaccctcattctacagtaaagtt +agcaagttggttatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgggtccgcggccaacctcgtcccagagatcaacactga +gacccttcccctggaaccagtggctggtgcagctattgctgcggctgtcactggtcaaaacaatataattga +tccctggattagaaataattttgtacaagcacccaatggggagttcactgtttcacctaggaactccccagg +tgaaatcctcctaaatttggaattaggtcccggtttaaatccttatttggcacacttatccagaatgtacaa +tgggtatgctggtggagttgaggtccaggttctccttgcagggaatgcgttcaccgc---tggaaagatcct +cttcgctgccgtaccaccaaatttcccagttgagttcttaagtcctgcccaaatcactatgctcccacattt +gatagtggatgttaggaccctagagccaattatgatacctctccccgatgttaggaacaatttcttccatta +caatcaacagactgat---ccgcgcattaacctggtagccatgctgtacacaccacttagatctaataactc +gggggacgatgtcttcacagtctcttgcagggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccgca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttctctaaattggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtaggaaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttcaaa---------ctgacacaga +ccatgattt---tgaagctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacacc------ctcaacgtgcatctggccccccctgtagcccccacttttccaggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaa------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW243610.2/1-7564 |Norovirus GII isolate def2, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaggaaaa----tgctgggtaccgtacccaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagttcc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgacg----------caaaatcggaaactgtaattgggataccggayttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttatcactactctgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgtccagacacactgaaaggtctcgctggtgaaaagtt +cccctatacggccttcagcaacaattgctacaacttctgttgttgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaactaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaacagttgatgatggaaagatcaaaaaggttgccaacgcgatcctttgtgcgctcggttcgctgttctc +aaaacctatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctcgcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgaaatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaggaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctaggtccctcctgcacaaagccaaagaggaaat +gtttagcaggattagaccggtggttgttatgatctcaggcagacctggtattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctgaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctaggaggattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaagactatttcaaacaagacttttcccatataaaactaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatcactca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagagaaaggatgagttccagctacaagggg +atgccctccagacgtacaactttgacaccaatagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactctggaagatctgaaggtcg +ccttgagagatgtgaagttcaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcatactgcaaatgaagtgggctcagcgc +tcctcagacttaggcaagcaagggctaggtactatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcgtcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaggggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggggtacttggtttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaaggggctcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggagagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgctggaggaaggtgctcctgaaggtactgtctgttctatactcgttaag +aggcctacaggtgagatgatccccctagcagtaaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatctcggcaccggtcct +ggtgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +gaccttggcacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctgcagcaagttatgagagaccagctgaaaccattcacagaacccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgat +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtctttcactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagaaaataaagaagagactcctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggatcttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctaccatcaggagtcccatgtacgtcgcaatggaactcaatagcgcattgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaactggatcaagactca +atcctcaggcagttgtactggacaaggggacccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcaactcatggcccttcttggtgaggcttcattacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcggctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaactcaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggacaatattagtgcagctcagataactatgtgcccccatgt +gatcgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataagaaacaggttcttccatta +caaccaggaaaacacc---ccccggatgaggctcgtagccatgctctacacgcctctaagggc---taattc +cggagatgatgtsttcactgtgtcctgtagggttctgactcgccccgctccagattttgaattcacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattttaacccttggtgagttgtctaa +ttcccgt---tttcctgctgctatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgacggcacgctgcagggcacaacacaattggtcccaacacagatttgcgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatctaacag--- +--attccccccag--------agagcccgca----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggcgagtcaga---gagacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +ccctgactt---caccacaaatcagcccatta---------------------------ggtttactccag- +--------tgggcatgggagaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcctctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggttatatagactgcctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactggacgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaatcctggaaataatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattttacacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcattaatgcagg---tgctaacgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcaaatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggatgctgctagaggggctgttaacgctccaatgacaaaaatattggactggaatggc +acaagatattgggcacctaatagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcatactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcag------------------------------gtggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------tc-ctttttcc---t--tcccttt +t------------ctct-----ctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>MW284776.1/1-7509 |Norovirus GII isolate P2D9 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacactgccccacagttaaggtcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagttcaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgagccact +tcctggcacaatattggagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggggtccacaaaccaccagcggctataagcctcgcgacaatagagctcacccccatatcactttactg +gaggcccgtttacaccccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagccttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaatgcaatcctctgtgcactcggctcactgttctc +aagaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtctgccgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaagcaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctacgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcagaccgaccgagac-------------ccaggaggtgaatgagcccga-----aaagg +aagtggcacaaggca---aatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtctcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgagatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttcttacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcataccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +attctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggctacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaacaattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttactcgatttggagttgggaccagaactaaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggtttccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggttcaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcaga---------ag +gatcc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgatataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttaccccctgtg +ca-----------gtctgcttcatatgtta-----------aca---------------------------a +tcaaaata--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttttt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgct--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW284778.1/1-7491 |Norovirus GII isolate P2D3 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacactgccccacagttaaggtcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagttcaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgagccact +tcctggcacaatattggagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggggtccacaaaccaccagcggctataagcctcgcgacaatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaatgcaatcctctgtgcactcggctcactgttctc +aagaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtctgccgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaagcaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctacgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atggcctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcagaccgaccgagac-------------ccaggaggtgaatgagcccga-----aaagg +aagtggcacaaggca---aatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtctcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgagatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttcttacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcataccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +attctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggctacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaacaattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttactcgatttggagttgggaccagaactaaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggtttccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggttcaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcaga---------ag +gatcc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgatataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttaccccctgtg +ca-----------gtctgcttcatatgtta-----------aca---------------------------a +tcaaaata--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttttt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW284781.1/1-7494 |Norovirus GII isolate P1D6 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------------tacctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +actcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccaacgtgttggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgagacgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cgctcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagtatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattccattggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctattgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctt +acattcgtaatcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW284782.1/1-7503 |Norovirus GII isolate P1D5 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +actcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccaacgtgttggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgagacgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cgctcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagtatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattccattggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctattgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctt +acattcgtaatcgaggggagtcacg--------ggtg----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW284783.1/1-7489 |Norovirus GII isolate P1D3 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +----------------------------c-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +actcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccaacgtgttggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaatccagcaccactggactatgt +caactttgaagcatg-ctcgagacgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cgctcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagtatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattccattggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctattgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctt +acattcgtaatcgaggggagtcacg--------ggtg----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW284784.1/1-7491 |Norovirus GII isolate P1D12 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacactgccccacagttaaggtcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagttcaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgagccact +tcctggcacaatattggagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggggtccacaaaccaccagcggctataagcctcgcgacaatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagccttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaatgcaatcctctgtgcactcggctcactgttctc +aagaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtctgccgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaagcaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctacgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccttggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcagaccgaccgagac-------------ccaggaggtgaatgagcccga-----aaagg +aagtggcacaaggca---aatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtctcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgagatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttcttacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcataccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacgatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +attctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggctacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaacaattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttactcgatttggagttgggaccagaactaaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggtttccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggttcaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcaga---------ag +gatcc---------aataatggccagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgatataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttaccccctgtg +ca-----------gtctgcttcatatgtta-----------aca---------------------------a +tcaaaata--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttttt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019618.1/1-7128 |Norovirus GII isolate 1026 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacacttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcgcaggtatagtggagtccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccactttgagagcctgtaaagatcttggagcgtacggactggaaattttaaaattagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaactctcttcttgcacgaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaggaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaataccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgaccgcaacaagatacttgcatttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtcgcgatcaagaagtgccagatagtgtatagtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaggagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaacgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcaccaagacgaaa +ttctggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagttaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaactacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccctccggggtgccttgcacctcccaatggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcctgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtagggaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aaaaca------cccaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttagactggagcggg +acaaggtattgggcaccagatgctaggttaaccacaacatacactggccgcttttccacccct--------- +ca---------------------accatcggtggcact---------------------------------g +ccaggaa----------------ga----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019619.1/1-7047 |Norovirus GII isolate 1059 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacacttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccactcaatcaaagggagaatagggacgccaaggaaccact +aactggcacaatattggagatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtctaat +acttggtgtccacaagccaccagcagccatcagcctcgccaaggtcgaactaacaccactctctctgttctg +gagacctgtctacacccccc---agtacctcatctctccagacactctaaggagactacatggagagtcatt +cccctacacggcatttgacaacaactgttacgccttctgctgttgggtgttagacctaaacgactcgtggct +taa---caggagaatgatccagagaactacaggtttcttcagaccataccagtattggaacaggaaacctct +cccaactatggatgattcaaagttgaagaaggtagccaacatattcttgtgcaccctgtcctcactgttcac +aagaccaattaaagacatattaggtaaactgaaacctctgaacatactcaacatgctggcgtcatgtgattg +gactttcgcaggcatagtggagtccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggcttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccaccttaagggcttgcaaagaccttggtgcatacggactagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +gggtacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggtcgaggcctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcaccaagacgaaa +ttctggagatcatccacaacgccactcccacctggcacctacgaaccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagagccacactt-ggcccagatagttgcagaagacctcctctcccctagtgtaatggatgtgggtgacttc +caaatatcaataagtgagggactcccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctcagaagtcacagacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaactgacagcaaaactc +aaagagtacgggctgaagccaacccgccctgacaaaactgaaggaccccttgttatctcagaagatctggat +ggcctgaccttcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacagagctca +attctcaggcaaatgtattggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcctgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagccccagccaggtcaccatgttcccccatat +agtagtggatgttaggcaattagaccctgtgttgattcccttacccgacgttaggaacaatttctaccacta +caaccaatcaaatgac---cccaccattaagttgatagcaatgctttatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtactcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgtggttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacagttacgacccaacagaagaaatcccagc +tcctctaggaactccagattttgtagggaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagaattcaatttcaaa---------ctgacacaga +ccgtgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aaaaca------cctaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtac--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019620.1/1-7020 |Norovirus GII isolate 1079 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +agg---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaggagactacatggagaatcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactctaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggtatagtggaatccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaaaatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccattgaggacgcagt +gctagacctcgaagcaattgaaaacaaccacatgaccaccctactcaaggacaaagatagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcaggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaggagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagagactcaactttgaggccccaccaagcatctggtcgaggatagtcaactttggttccggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgttctgcctaaaggggttaaggaactcttt +ggagttgaaattaaacaaatccaagtccacaagtctggagagttctgcagattcagattcccgagatccatt +aggccagatgtcacaggacttgtgctggaggaaggagccccagaaggcactgtctgttccatactcataaaa +aggcctacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggccgg +accgttggtggccagatgggaatgctcctaacaggggcgaatgcaaagaacatggatctcggcactggtcct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccacccaagggcaggatggggaggcagtccttgagggaggtgag +gaccgtggcacctactgtggcgccccaattctgggccctggcaaggcgcccaaactcagcgcgaagactaag +ttttggcgctcgtcaccagatgccctgccgcctggcacgtatgaacctgcttacctgggaggcaaggacccc +agagtgaaaaaagggccttccctgcagcaagtcatgagggaccaattgaaaccatttacagagcccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccctgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgtggttcaaccaca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacagttacgacccaacagaagaaatcccagc +tcctctgggaactccagattttgtagggaaaatccaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacaca------cttaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttcttttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaacaactacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaa------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019621.1/1-7128 |Norovirus GII isolate 4020 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaacc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggaagaattagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggagtggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggtatagtggaatccctaatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccactttgagagcctgtaaagatcttggagcgtacggactggaaattttaaaattagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaactctcttcttgcacgaatcgctgctgcacgttctctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaacccaccttgccag +ggagttggccaggaagatcgcagcctccctcacaggggaccagcgtgtgggcctgatcccacgcaatggcgt +tgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcggaggctcctgaggtggagaaggcaa +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaataccccgcatggaaaaggtgttatgaagactctca +ccactggctccctcattgcccgagcatcaggattactccatgagagactagatgaatatgaattacaaggcc +cagtcctcactaccttcaactttgaccgcaacaaggtgcttgcatttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaggttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccgactgagattcccaaaaccaatc +agaacggatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagctagaatgggaacccatgcaaccatgaagatccaggggcgc +acagttgggggacaaatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacacca +ggcgactgcggttgtccctacatctacaaaagagggaatgactatgtggtcataggagtccatacagccgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacagaggaacgtactgtggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgagccagcctacctcggtggcaaggatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaaaccatttacagagcccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcatgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaactggtgaag +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggcctcatggatgaactcaaggctcactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccagatataaatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtagggaaaatccaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccatcaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaactccttttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagtaatctacaacaggcttccttccaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaagactttggactggagcggg +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------aacatcggttgcact---------------------------------a +ccaggaa----------------gg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW019622.1/1-6699 |Norovirus GII isolate 3029 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, partial cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacaaccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaagatcccc +tcc-----------------------------ccccccacccaacgg------ggaggatgaattagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagcttaccactgtcagccaacc +ggaagaaaccaatacggcgttcagtgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaggagactacatggagagtcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgactccaaattgaagaaggtagccaacatattcttgtgcaccctgtcctcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacattctcaatattctggctacatgtgattg +gactttcgcaggcatagtggagtcactaatcctcctagctgaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggagactacgaactacagggacctcaagacctcgctgtaga +actcgtacccgttgttatgggggggataggtttggtgctgggattcaccaaggagaaaatcggcaagatgct +atcgtctgctgcctccacgctgagagcctgcaaagaactcggagcctacgggttagagatactaaaattgat +catgaagtggttcttcccaaagaaggaggaggcaaacgaactggcaatggtgagagccatcgaggacgctgt +acttgaccttgaggcaattgagaacaaccatatgacagccctactcaaggataaggacagccttgcaactta +catgaagactcttgatatggaggaagagaaggccagaaaactgtctaccaaatctgcctcacctgacattgt +gggcacaatcaacgccctcttggcaagaattgcagctgctcgatccctcgtgcatagggctaaagaagaact +atccagcagggcaagaccagtcgttgtcatgatctcaggcaaaccaggtatcgggaagacccacttggctag +agagttggcaaagaaggttgctgctacactgacaggagatcagagagtgggcctcatcccacggaacggagt +cgaccactgggacgcatacaagggtgagagagttgtcctttgggatgattacggaatgagcaaccctgttca +tgatgccttgagactccaagagctagctgacacttgccccttgacactaaactgtgacagaattgaaaacaa +aggcaaggtttttgacagtgatgccataatcatcaccaccaatctggccaatccggctccactggattatgt +caactttgaggcgtg-ctcgaggcgcattgacttcctcgtgtatactgaagctcctgaagtcgagaaagcaa +aacgcgacttcccagggcagccggacatgtggaggaatgccttcagtcctgacttttcacacattaagatgc +aacttgccccccaaggtggttttgacaagaacggcaacacgcctcatggcaaaggggtcatgaaatctttaa +ccttgggttccctcatcgcccgtgcctcagggcttctccatgaaaggcaggacgagtacgagttgcagggac +cagctctcacaaccttcaacttcgaccgtaacaaggtacttgccttcagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgcgggttggaaaccagctcaaggatgttaagaccatgccagaactcaaacaag +ctctcaagaacgtctcaatcaaaaggtgccagatagtttatggtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaagtggaaaaagtgcagagtgccaccgtgcagaccaacaatgagctgtccggcgcac +tgcaccacctgaggtgcgccaggatcagatactatgtcaagtgtgtccaggagtccatctactccattcttc +aaatcgctggggctgcgtttgtgacaacgcgcattgttaagcgcatga------acatacagaatctctggt +ctaaaccaccattggtagacacagaaga--------gacagccaccgaggaaggctgcccaaaacccaaa-- +-gat----gacgaag---agttcatcatctcctctgatgacattaaaactgagggcaagaaaggaaagaaca +agtctggccggggtaagaaacacacagccttctcaagtaaaggtctaagtgatgaagagtatgaagagtaca +agagaattagggaggagagacatggcaagtactctatagaagaataccttcaggacagagataagtac---t +atgaggaggtggccatagccagagcgaccgaagaggacttctgtgaggaggaggaggccaaaatccggcaaa +ggatattcaggccgaccaagaaacaacgcaaggaggaacgcacttctctcggtctcgtcaccggctctgaga +tcagaaaacggaacccagatgattttaaacccaaaggaaagttgtgggcagatgatgacaggagtgttgact +acaatgagaagctcagtttcgaagccccaccaagcatatggtcaaggatagtcaactttggttctggttggg +gattttgggtctccc-caagcttattcattacatcaacccatgtcataccccaaggcgcccaggagttcttt +ggggtgcccatcaagcagatccagatccacaaatcgggagagttttgccgcctaagattcccaaaaccaatt +aggactgatgtgacaggcatgatactggaagagggggctccagaaggaactgtggccacactgctcatcaag +agaccaactggtgagctcatgccgctagcggctagaatgggcacccaggcaactatgaagatccaaggccgc +acagttggtggtcaaatgggcatgctattgacagggtccaacgctaagagcatggatctgggaacaacacca +ggcgactgtggttgcccctacatctataagagaggaaatgactacattgtcattggagtccacacagcagct +gcccgcggtggaaacacagtcatctgtgcaacccaaggtggcgaaggtgaggccacacttgaaggtggtgac +aacaagggaacctactgtggtgcaccgatcctaggccctggtaacgcccctaagctcagcacaaaaacaaaa +ttttggaggtcttccactgcaccactcccaccgggcacctacgagccagcctacctcggcggcaaagaccct +agagtcaaaagtggaccctccctgcaacaagttatgagagaccagttgaagccattcacagagccaagaggc +aaaccacccaacccaaatgtgttagagtcagcaaagaagactatcataaatgtgttggagcagacaatagat +ccaccccaaaagtggtcgtacgcgcaagcatgcgcatcacttgataaaaccacgtccagtggccaccctcac +catgttcggaaaaatgattactggaatggggaaactttcacaggcaagctggcagaccaagcttcaagagct +aacttgatgtatgaggagggaaagaacatgactccagtgtacaccggagcactcaaggatgaattggtgaaa +acagacaaaatatatggccaaatcaaaaagagactcctgtggggctcagacttagcaacaatgatccggtgc +gcacgagcatttggaggactaatggacgagctcaaagcccactgcatcacactacctgttagggtaggtatg +aacatgaatgaagatggccccataatatttgagaagcattccaactacaaatatcattatgatgcagactac +t-cccgctgggactcaacacaacagagagcggttttagctgcagcactggaaatcatgg-ttaagttttctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttctcctagtgtaatggatgtgggtgacttt +caaatatcaataagtgaggggcttccttccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtctcctgacatcatccaggccaactcccttttc +tccttctatggtgatgacgagattgtgagtacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatctgagacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgccgcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccctacccgacgttaggaacaatttctatcacta +caatcagtcaaatgac---cccactattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgggtcctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaagccattctctgtcccggtcttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacagttacgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtagggaaaatccaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaacgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggactgtctacctccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tata------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT232050.1/1-7560 |Norovirus GII isolate 122, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggctgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaatcaaagggagagcagggacgctaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatacttaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcggaagcccctgaagtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaactgcagggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaaattgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agttcgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaata +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaggaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagtttttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggggaagccacacttgaaggaggtgat +agcaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggt +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgttatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggcaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttcttcagatccaccatgcccg------ggtgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcaattttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgccgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MW009068.1/1-7553 |Norovirus GII isolate 387-1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaagcaacccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaaggggggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tacaccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacagcaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcacccccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccgtatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtggtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaaccacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaatgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaacaa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgaaagattggatgagtttgacctgcagggtc +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggcaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtgtattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatctcccccg-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcaggggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +agagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggcagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcgggtcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgctaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagaggggtaacgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgctcgaggggagagac +aaccacgggacctactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccacttccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgaacagatcattgac +ccaccccaaaaatggtcttatactcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +cacatgaaaaagaatgacaactggaacggagagtcctttaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gccagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgattac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggtgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagaaaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgaagatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaaggtcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttctcaaataacaatgttcccacatgt +ggttatcgatgttagaaccttagaacctgtgctgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtttcatgtaggattcttactaggccctctcctgaattcgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccatttacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggccacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaacttagctcctgctgtggccccgctctttcctggag +agcgtcttcttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccataa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggttccagccaatggttattttagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgatttcaataggcaa--- +------------------------------ttgcagcaaaattcatttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagttctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgaattcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattc------cacaaattctacccaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctatatga---ggggtgccctccaaacaacatttgtcacccctccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagatgattag---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MW009069.1/1-7526 |Norovirus GII isolate 387-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaagcaacccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaaggggggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tacaccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacagcaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcacccccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccgtatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtggtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaaccacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaatgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaacaa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgaaagattggatgagtttgacctgcagggtc +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggcaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtgtattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatctcccccg-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcaggggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +agagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggcagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcgggtcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgctaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagaggggtaacgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgctcgaggggagagac +aaccacgggacctactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccacttccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgaacagatcattgac +ccaccccaaaaatggtcttatactcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +cacatgaaaaagaatgacaactggaacggagagtcctttaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gccagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgattac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggtgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagaaaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgaagatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaaggtcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttctcaaataacaatgttcccacatgt +ggttatcgatgttagaaccttagaacctgtgctgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtttcatgtaggattcttactaggccctctcctgaattcgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccatttacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggccacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaacttagctcctgctgtggccccgctctttcctggag +agcgtcttcttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccataa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggttccagccaatggttattttagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgatttcaataggcaa--- +------------------------------ttgcagcaaaattcatttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagttctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgaattcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattc------cacaaattctacccaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctatatga---ggggtgccctccaaacaacatttgtcacccctccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagatgattag---- +-----------tgat--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MW009070.1/1-7561 |Norovirus GII isolate 432-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtacacaaaccgccagctgccatcagcctcgctaaggttgagttggcaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggggaaacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtagagtccctgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgatcttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +gggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaatacagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacgggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacagggtccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggccgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagagatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-taaagttctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgacaccatacaggctaattctctcttt +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +aaagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaagatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttccgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgggttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgcttcaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------ggactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctc--------------------- +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>MW009071.1/1-7545 |Norovirus GII isolate 510-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------tgcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggagatactaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggttgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggaactggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccctctcacgctgaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctggacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgcccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatctgatgacatcaaaactgagggcaagaaagggaagaata +agtccggccgtggtaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgagttctgccggttgagattcccaaaaccaatc +agaactgacgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggtcacactgctcatcaag +agaccaactggagaactcatgcctctggcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +acagtcggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aataaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaaa +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcgtttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacgcttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaaactgacaacaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaggggccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaagatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgttccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatactccactcagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaggctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacccctacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgttcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcctctactgctacta-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MW009072.1/1-7553 |Norovirus GII isolate 387-1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaagcaacccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaaggggggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tacaccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacagcaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcacccccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccgtatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtggtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaaccacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaatgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaacaa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgaaagattggatgagtttgacctgcagggtc +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggcaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtgtattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatctcccccg-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcaggggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +agagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggcagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcgggtcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgctaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagaggggtaacgactgggtggttataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgctcgaggggagagac +aaccacgggacctactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccacttccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgaacagatcattgac +ccaccccaaaaatggtcttatactcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +cacatgaaaaagaatgacaactggaacggagagtcctttaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gccagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgattac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggtgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagaaaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgaagatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaaggtcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttctcaaataacaatgttcccacatgt +ggttatcgatgttagaaccttagaacctgtgctgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtttcatgtaggattcttactaggccctctcctgaattcgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccatttacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggccacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaacttagctcctgctgtggccccgctctttcctggag +agcgtcttcttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccataa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggttccagccaatggttattttagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgatttcaataggcaa--- +------------------------------ttgcagcaaaattcatttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagttctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgaattcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattc------cacaaattctacccaatcaact---------gttg +ttagcacttcctcagtat--------------------------------cac------------------c +ttctaggggttcttctgctccttctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctatatga---ggggtgccctccaaacaacatttgtcacccctccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcaaccgcttttcgctt +accttcgcaagaagggggagtcaca--------agtttag--t-----------gaaaagatgattag---- +-----------tgat------------------------------------tgataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT537605.1/1-7508 |Norovirus GII isolate 259-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaag---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT537633.1/1-7515 |Norovirus GII isolate 259-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------gat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT537634.1/1-7515 |Norovirus GII isolate 259-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------aagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaag---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT537941.1/1-7512 |Norovirus GII isolate 259-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT755733.1/1-7557 |Norovirus GII isolate Hu/US/2019/GII.3[P12]/CA-RGDS-1098, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacag +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcgtatagcg----------ccaa---agatggcgtctctggtttgcctgaacttaccactgtccggcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaattagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttttggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggcttcttcaggccttaccaagaatggaacaggaaacccct +ccccaccatggacgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctgttcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttaatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtaga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagttagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccattca +cgacgccctcaggttacaggaacttgctgacacctgtcccctcacgctaaactgtgacaggattgagaacaa +aggaaaggtcttcgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccacgagaggttggatgaatacgagctgcagggcc +caactcccaccacttttaactttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaagatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggagaccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aaccgctagcaaggatgggtgcccaagaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctcttggtttggtcacaggttctgaaa +tcaggaagaggaatccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagctagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaactggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctatatttacaagagggggaatgactacgtggtcattggggtccatacagctgct +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacaaacaattgac +ccaccccaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcat +catatgcggaagaatgattgctggaatggggagtccttcacaggaaaattggcagaccaggcttccagggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggtaggatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaacttaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactat +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctatagcaaaatc +agcaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaatgcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggctgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattagataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgatagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccg------------cgaggcagacttccaacaatggtccttacccga +ttattctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctagtgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccctagatccacacccagcagtgggacttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcatactcgtccgggtcgtctcgatcca--------------g +cgagtcta--------------------------------cagttactagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacttgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attgaatttaatttt- +--------------gga---atcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MN996296.1/1-7410 |Norovirus GII isolate SCD1044_3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-----------------------------------------------------------------ctaacat +gtctgtcacctttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctgacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggaatgt +gctcggagtacacaaaccacccgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +taggcccattaaggacatcattggaaatcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggagtaggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acgtgtcaaacctctggt +cgaagccacccatcgaggaaggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacatcaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +aaagaatcagagaggagaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggagagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctaatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggacctaggcacaacacca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgat +aacaagggtacatattgtggagctcccattttgggacctggcaatgcaccaaaactgagcacaaagacgaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtggaagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaagcttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctgtcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtataggtaccactatgatgctgattac +t-cccgttgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgaaccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttgcttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagagtatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctaaac +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtatcacccagaaactctcctgg +agaaattttattaaacttagagttgggtcctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagccgaac---agccgcatgagattagtggctatgctctataccccacttaggtctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttatct +agtgccaccttctgttgaatctaaaactaagcctttttccttgcctattttaaccctttctgagcttacaaa +ttcgagg---ttcccagttcccatcgattcgcttttcaccgcccagaataacgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggttagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccaaccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttatattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcagggttggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaatcaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcccccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------cg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcgc +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaa--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN996297.1/1-7432 |Norovirus GII isolate SCD1055_1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------------------------------------at +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-accccgagagacgaaccacaa +aag---------------------tccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgaag----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgctagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgattccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccattga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggtaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggagatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcgccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaaat +atgggttggtggataccatgaaagttggtaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactttggt +cgaagccacaatt---agatcaaagtga--------atcagaagctaaggaagaggccctcaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaagtcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgaactagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctactggcccctagtgtagtagatgtgggagacttt +aaaattacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccgacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcactgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacagctagaacccgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +ttacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacaggaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggga----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatcct-----------ctaac------------tcttctactaccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-g-aac-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN996298.1/1-7064 |Norovirus GII isolate SCD1061_4 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------atgtgggatggtgagttctaccattatgcgatatatgtctctggtggcaaggc +cataggggtgcacaaacccccagccgcaatcagccttgccactatcgagcttacacctatatcgctttactg +gaggcccgtttatgtcccta---attacttggtccaccctgacacactcaagagcttagctggtgaaaaatt +tccatacaccgcatttagcaacaattgttacaatttctgttgctgggttcttgacctgaaagactcgtggct +caa---ccgcagatcaataactagaacaaccggtttcttcaagccttatcaatcctggaacaagaaaccact +tccgacggtggatgatggaaaaatcaagaaagtcgccaatgcagtcctgtgcgcccttggttcactattctc +aaaacctattaaggacttgatcgggaagctgaagccactgaatttcttgaatctcctcgcttcgtgcgactg +gaccttctccggagtggttgagaccgtcatactagctgctgagctgttt---ggtgtgttttggaccccccc +cgacgtgtcgaatttcatcgcgtcactcgtcggggattttgagctgcagggtccagaggatttagctgtgga +gttggtaccgatcatcatgggcggtatcgggatggtgctgggattcaccgccgagaagatcggccgaatgct +atcatcagctgcatcgacccttagggcctgtaaagacctaggcaactacgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaggaggaaaaggcagagatggaaaccttgagggctatagaggatgctgt +cttagacatggaggcgattggaaacaatcacctcactgctctgttgaaagacagggacagcctcctaactta +catgaagactctagaccttgaagaagaaaaggcgagaaagctgtccacaaagtcatcgtcccctgacatcgt +gggtaccatcaatgccatactagccagaattgccgcggctaggtctctcctgcacagagccaaggaagaaat +gtacagcagacctaggcctgtcgtggtgatgatatcaggaagaccaggggttggtaagacccatatggctag +acacctcgccaagagcgtggcgggcaccatgagcggtgaccaaagggtgggcctcatcccccgcaatggagt +tgatcattgggatgcctacaggggagaacgagttgtcttgtgggacgactatggcatgggtaacccagtgaa +ggatgccctcgctctgcaagaactagcagacacttgtccagtcaccctcaattgtgacaggatagagaataa +ggggaagatgtttgacagcgaggtaataatcataacaactaatttggccaaccccgccccgcttgattatgt +caactttgaagcttg-ttcccgcagaatcgacttcctcgtctacgcagaagccccgaccattgagaaggcga +agaaggattttcccgggcaaccagacatgtggaaggagcacttcaaagcagacttctctcatctcaaactca +cactggccccgcaaggcggttttgacaagaacggcaacacgccacatgggaaggggactatgaagaccttaa +cacagggttccctcacagcaagagtggctgggcttgtgcacgaaaggaaagatgagtttcagttacagggtg +gagaattgcaggtctacaattttgacacaaacaaggtatcggctttcaggaagcttgctgcagacaacaact +atgggttcctggagacaatgagagtcggctcctcactcaaggacgtcaagacagtggaagatcttaaatgtg +cccttaagagtgtcagtttcaaagaatgtgaaataatctataggaatgttaagtaccgcatatcatcagacg +gttgcggtaaggtcagcatagagaaactggcagataacaactcccaaacaaccagagagattgtcacggccg +tcactagactacgacaagctcgtgctaggtattacatcagctgcttccaagacctagtctacacactcttgc +aggttgccggagcctcatttgtcatta---------------acagaa------tagtcaagaagttcaact +gggaacgatgggtcaaggctccagaaacagatgaacccacaccaggtaatgg-caagcccgac--------- +-----actgaagagg---attgggagatcgcccccaaagatgtggactctgagggtaaaaaggggaagaaca +agaagggcaggggacgtaagcacactgcattctccagcaaagggcttagtgatgaggagtatgatgaattca +aaagactaagggaagagaaacagggccgctacacaatagaggagtacctccatgacagggaccggtac---t +atgaagagctggcagtggcccgggccactgaggagaacttctgtgaagaggaagagataaagatcaggcaaa +ggatattccgccccaccaaaaagcagaggaaagaggagcgcggggttctgggactcgtcacaggagcagaca +tcaggaaacggaaacccgatgacttccaaccaaaaggaaaattgtgggcagatgattctaggagcgtcgatt +acaatgagaagatcgagtttgaagctcctcctagcgtctggtcaagaatcgtcccgcttgggactggttggg +gattctgggtctcat-ccaacttactaattaccaccacacatgtgctgcccaaaggtattaaagagcttttt +ggggtggacatcaaacaagtccaagttcacaaatcaggtgaattttgcagattcaggttcccaaaaccagtg +aggccagatgtctctgggttggtgttagaagaaggggcccccgaaggcacagtgtgctctgttctcatcaag +aggtctacaggagagatgatcccccttgcagttaggatgggcacccacgcctctatgaagattcaggggcgc +actgttggcggccagatgggcatgctgctcactggagccaacgctaagaacatggatttgggtaccggcccc +ggggattgtggttgcccgtatatatacaagaggggcaatgacatcgtggtggccggcgtccacacagcagca +gcgcgcgggggcaacacggtcatttgcgcaacccaaggacctgatggtgaggcagtgttggaagggggagag +gaccacggtacttactgtggagccccaatactggcccctggtaaagcgccgaagcttagcacaaagaccaag +ttttggcgctcatcccctgattcccttccccctgggacgtatgaaccagcttaccttgggggcaaggacccc +cgtgtggagaaagggccgtcactccaacaagtgatgcgagaccaactcaaacccttcacagagcccaggggc +aagccacctaggccgtcagtgctggaggaagccaagaagacagtcatgaatgtgctggagcagaccatagaa +ccagctaagccatggacctactctcaagcctgtgcttcattggataaaacaacatccagtggcagtccccac +catgtcaggaagaatgaacactggaacggggagtcttttactgggcctcttgcagatcaagcctcaaaagcc +aacctgatgtatgaggaaggtaaacatatggaccctatgtacacagcagccctcaaggatgagctggtaaaa +actgacaaaatttataagaaaatcaagaagaggctgttatgggggtctgatctggggacaatggtgaggtgt +gctcgagcgtttggaggattgctcgacagcatgaaagagagttgcatttccttaccttgtagggttggcatg +aacataaatgaagatggaccactcatatttgaaaaacattccaaatacacctatcactatgatgctgattac +t-ctaggtgggactcaacacaacagagggctgtactgagtgcagctatggaggtaatgg-tgaagttctccg +ctgagccggaact-ggctcaggtggttgccgaagacctccttgcacccagccgtcttgacgtgggtgacttt +gtcatctctgttcaagaaggtctcccatcgggtgtcccctgtacgtcacagtggaactcaattgctcattgg +attttgactcttagtgctatgtctgaggtttctggtctttcccctgaggttgtgcaagccaactcctgtttc +tcattctatggggatgatgagatagtcagcacagatataaatctggacccagaaaaactcaccaggaaactg +agggaatatggcctcgtcccaacaaggccagacaaaactgagggcccacttgtgattactcaggatttgaat +ggtctcacatttctgaggcggaccatagtgcgggaccccgcaggctggtttggaaaactggaccgtgattcc +attctaaggcagttatactggaccagaggacccaatcatgagaacccctttgaaagcatgattcctcactcc +cagagagcaacccagttaatggcccttcttggggaagcctcgttgcatggtccccagttttacaagaaggtg +agtaaaatggtcatcaatgagatcaagagtggtggtctggagttctacgtgcccagacaggaggccatgttt +agatggatgagattttcagacctcagcacgtgggagggcgatcgcaatctggctcccgagaatgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggcgcggctggcctcgtaccagagatcaaccatga +ggtcatggccatagagcctgttgcaggagcctctttagcagctcctgtcgtaggacaacttaatataattga +tccctggattagaaataattttgtgcaagcccctgctggagaattcactgtttcgcctaggaatgctccagg +tgaatttttattagatctagagttaggtccagaattgaatccctatcttgctcaccttgcacgcatgtataa +tgggcatgcaggtggtatggaggtgcagatagtgcttgctgggaatgcgttcacagc---gggcaaaatact +gtttgcagtcataccgcctggattcccctatgaaaatttgtcacctgcacaattgaccatgtgcccacatgt +agtagtggatgtgaggcagcttgaaccaatcttgctgcccatgccagacatccgcaatacattcttccatta +caaccagagcaatggg---ccaaaacttagattagtagctatgctttacacacccctaagggctaacaatgc +tggtgatgatgtcttcacggtttcctgcagggttttgactcgcccatcaccagattttgaattcaattttct +tgtccccccatctgttgaatctaagactaaagctttcacccttccaattcttaagatatctgagatgacaaa +ttcaaga---tttcccataccagttgatcagatgtacactagtaggaatgaaaatatagttgttcaaccaca +aaatggcagggtgacacttgatggagagctacagggcacaaccacactccaaccggtgtccatttgtggctt +ccgag-----------------------------------------ggacgctgcagaccagg--------- +-----------------------ctg--gc----------------------------agatcaaccaa--- +--attacaca-------------------------------------------------------------- +----------taccaagtgcaccttgagaatttggacggctcacccgtcgacccgacagatgaagttccagc +ccccctggggacaccagattttcaggcccagctatttggagttgtcagccaaa---ggagtagtga------ +-----------------------taatgccacc--------agg-----------gcacatgaggctagggt +caacaccaacgatcccaccttcgcgccccagatcgcccaggtgcgttt---ca---------aatcaccatc +ccacgactt---ctttgacaatgaacccatca---------------------------aattcacaccag- +--------ttggaatcagtgttg---atagcg---------aaaacagctacaaccaatggctcctacccag +gtatggtggacac-ctgaca------aacaacacccacctggccccctctgtgtccccaatgttccccggcg +agcagattctcttcttccgctcgttcatgccag------gtgccagtggtca------cactg--------- +--atggtgctattgactgccttttaccacaagagtgggttgcccacttctatcaggaggccgcaactgcgca +aacagatgtggctctgattagatttgtgaaccccgacacaggcagagtgctatttgaagggaagttacacaa +gcagggttttataaccatctccaacagcggggaccaccccattgttatgcctgctaatggatacttcaggtt +tgaggcatgggtcaaccaattttactctctcgcccccgtgggaactggaagtgggcgcaga---------ag +agttc---------aataatggctggagcttttcttgctggtctggctggtgatgtggtgacctctggcatc +gggtcgctcatcaatgcagg---tgctaatgcagtaaaccagaaggttgaatatgacttcaataggcaa--- +------------------------------ctccaagaagcttcttttaaacatgacaaggagatgttgaat +gctcaaattaatgccacaaccaaattgcaaagggacatgattgccattaagcatggggttttgaccgctggc +ggcttttcccccactgatgctgcaaggggttccatcaatgctccaaccaccaaaattcttgactggaacgga +tctaggtactgggcaccaggatcaatgagaacaacagcgtactctggcaattttatatcgcagggagttaag +ca-----------gcccacacccattgtta--gatctgtgaaac---------------------------c +tcaagt-----------------acagcaatct--------------------------------------- +----------------------------------------------------------------------cc +tgcccctt-----------cttctgttta---ttctgtaggttctgttaggtcac----------------- +---------------------aatcaacaca---atcaactcagttaacag----ggtcagg--------ga +ctgtatc--------------------------------aagggcacccaccc---------cctcaacaat +cacaac-------------------act--------------gtccagaacaagtgagtgggtgaggagcca +gaatgataggttgagcccctttatgg---gaggcgcactccagacagctttcatcacgcccccatcgagtaa +ggcttcatcctcat------------------------------caggaa---cagtctcaaccgttcctag +agaaattttgga-ctcctggactcctgcat------------ttaacacgcgcaggcagccgctcttcgctc +acatacgtaagcgaggggagtcacg--------ggtttag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN996299.1/1-7431 |Norovirus GII isolate SCD1062_2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------------------------------------at +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-accccgagagacgaaccacaa +aag---------------------tccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgaag----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgctagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgattccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccattga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggtaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggagatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcgccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaaat +atgggttggtggataccatgaaagttggtaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactttggt +cgaagccacaatt---agatcaaagtga--------atcagaagctaaggaagaggccctcaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaagtcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtacacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgaactagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctactggcccctagtgtagtagatgtgggagacttt +aaaattacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccgacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcactgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgttagacagctagaacccgtgctgatccccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +ttacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaacggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacaggaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggga----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatcct-----------ctaac------------tcttctactaccacctctg----------------- +-------------tga-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-g-aa--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN996300.1/1-7395 |Norovirus GII isolate SCD0162_3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------------------------------------at +gtctgtcacctttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctgacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggaatgt +gctcggagtacacaaaccacccgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +taggcccattaaggacatcattggaaatcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggagtaggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctatactatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acgtgtcaaacctctggt +cgaagccacccatcgaggaaggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacatcaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +aaagaatcagagaggagaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggagagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctaatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggacctaggcacaacacca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgat +aacaagggtacatattgtggagctcccattttgggacctggcaatgcaccaaaactgagcacaaagacgaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtggaagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaacgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaagcttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctgtcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtataggtaccactatgatgctgattac +t-cccgttgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgaaccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttgcttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagagtatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctaaac +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtatcacccagaaactctcctgg +agaaattttattaaacttagagttgggtcctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagccgaac---agccgcatgagattagtggctatgctctataccccacttaggtctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttatct +agtgccaccttctgttgaatctaaaactaagcctttttccttgcctattttaaccctttctgagcttacaaa +ttcgagg---ttcccagttcccatcgattcgcttttcaccgcccagaataacgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggttagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccaaccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttatattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcagggttggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaatcaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcccccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------cg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcgc +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT738527.1/1-7550 |Norovirus GII isolate Hu/US/2019/GII.2[P16]/CA-RGDS-1097, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaacacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacccaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacgtactgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgctatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagctctcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagctgccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagatcgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccggctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatga +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +agacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggattc---------aatgacattgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttatactctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---accttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>MT731279.1/1-7561 |Norovirus GII isolate Hu/US/2018/GII.6[P7]/CA-RGDS-1095, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttccaacaaagaagaggt------tggtgcgttatccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaaggaact-------------aaagcaccc +agtagtga----------------tcagctctgccccacagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------cgaaatcggaaaccgtgcgtgggctaccagacttgacaacggt---gcaaaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagggagcacagaccagccaccgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctgggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgctcttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacctactcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctaataggtgattttgaactgcaagggcctgaggatctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgccgagaagataggccgcatgct +gtcgtcagctgcatcaacgctgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggagaccctaagagcgattgaggatgccgt +cctagacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctggatctagaagaggagaaggcaaggaagctgtccaccaaatcatcttcgccagacatcgt +cggcactattaatgccatactggccaggatagctgccgccaggtccctcttacacaaggccaaagaagaaat +gtttagtaggatcagacctgtggttgtcatgatctcgggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtagggctcgtcccacgcaacggagt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgattatggcatgggaaaccctgtcaa +agatgccctgacactgcaagaactggctgacacctgcccagtaactctaaactgtgatagaattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgactaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctctagacgggtcgactttttggtctatgcggagtcaccagaaattgagaaggtta +agaaagatttccccggccaacctgacatgtggaaagaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggtcgcaggccttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaacttcgataccaacagggtctctgcatttaggaagctggccgcagacaacaagt +acgggatcatggagacgatgagagtgggcaaagcgcttaagagtgtcaagaccctggaggacctgaaagttg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccagatatcgagtctcttccaatg +gtaaaggctctgtctctgttgataaagtcgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcaggcttaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaagaggttttgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaagacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggccttagtgatgaggagtatgacgagttta +agagaattagagaagaaaggggcggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggcaaaaataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccaaagggcaacctgtgggcagacgacaccaggagtgtggatt +acaacgagaggcttgatttcgaagctcccccgagtgtctggtctagaatagtcccattgggtactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcccaaggggattaaggaacttttt +ggagttgaagtcaaacagatccaaattcacaagtctggagagttctgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggagggtgctccagaaggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaagcgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagacggggaggcagtcctagagggaaatgag +aaccttggaacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacaaagaccaag +ttctggcgctcgtcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggaccct +agagtagaaaaaggaccatccctacagcaagtcatgagagaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgcgcctcactggacaagaccacctccagtggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatcctttactggtccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaag +actgacaagatctataagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgc +gccagggcctttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtgggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagttcaggagggtctgccgtcaggggtaccatgcacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcgggtctctcaccagatgttattcaagcccattcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agggagtatggcctggtccctactcgacctgacaaaactgagggtccccttgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggatccagctgggtggtttggaaaattagaccaagactca +atcctcaggcaattgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtc +agcaagatggtcattaacgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtggtgggggcttcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagttcaccgtctcgccaaggaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgctgtgccaccacatttccccgtggaaaatatcagtgcagctcaaataactatgtgcccccatgt +gattgttgatgtgagacaacttgagccagtactcctaccccttcctgatataaggaataggttctttcatta +caatcaggagaacact---tcccggatgagacttgtggccatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttaacccgtcctgcccctgattttgaatttactttctt +ggtgccgccaactgttgaatcaaagactaaaccttttacattacctatattaactcttggtgagctatctaa +ttccaga---tttccagccccaatagatatgttgtacactgatccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactttgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggaggaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtatgaccctactgatgaagtgccagc +agtcctcggtgccattgattttaaggggactgtttttggggtggccagtcaga---gggacgtgtcaggagg +-----tc---aggtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactagggtccattctcat---gc---------actcagagtc +ggatgactt---cgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggcgaca---------------------acgactggcaccagtgggagctgcccga +ctattctggacac-ctaacc------ctaaacatgaaccttgccccagcagttgctcctgcattcccgggtg +agaggattcttttcttcagatcaattgtcccgt------ctgctggtggcta------cggct--------- +--ctgggcaaatagattgcctcataccacaggagtgggttcagcatttctaccaagaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcatag +ggaaggtttcatcacagtggctaattctggcaacaaccccattgttgttccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggtgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---tgctaatgcagttaatcaaaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacattaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggctgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccccgttca +ca-----------agtctcctgctcctccccagcatgttgtttc---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagttctccttcttccgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctatcag-------cagg--------aa +ctgggtc----c---tccag-------------------gtccatctccacat---------ctacagctac +ccccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggcttagcccgttcatgg---atggtgctctccaaaccgcctttgtcacacctccatcgagtaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------atc-aggt--------------------tttctc-------cc-tttttctt---t---tctctc +t------------ttta-----------aaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>MT731332.1/1-7553 |Norovirus GII isolate Hu/US/2018/GII.7[P7]/CA-RGDS-1096, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaagggcacc-------------aaagcaccc +agcagtga----------------tcagcattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------cgaagac------atcgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaatactccatacactgtccctccattgagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttatcattactccgtgtacgtcagcgatggcaaggc +tctaggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactctactg +gagacccgtttacaccccta---actacctggtctccccggacacattaaagggcctcgctggtgagaagtt +tccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaacgatacatggct +taa---cagaaggtgcatttccagaactaccggctttttcaaaccatatcagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaagaaggtggccaacgcaatcctttgtgcactcggctcgctattttc +aaaaccaattaaggatctgttaggcaaactcaagccattgaatctattacacttgcttgcgtcctgtgattg +gacgtttgcaggtatagtagagacagtcatcttaatggcggaacttttt---aatgtcttctggaccccacc +agatgtttctaattttatagcttccctgataggtgattttgagttgcaagggcctgaagacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacctagggaattatgcccttgacatactaaaattagt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaggctatagggaataaccacctcacagcccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaagaagagaaggcgaggaaactgtccaccaaatcatcttcaccggacatagt +tggcaccattaatgccatactagctaggatagctgctgctagatccctcctgcataaagctaaagaggagat +gttcagcagaatcagaccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggctag +gcacttggctaagagcatcgccaacaccatgagtggcgaccagagagtcggtctcgttcctcgcaacggtgt +cgatcattgggacgcctacaggggggaaagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacgtgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacctagtcaatcccgcgcccctcgactatgt +gaactttgaggcgtg-ttctaggagagttgacttcctggtctacgcagaatcaccagaaattgaaaaggtca +agagagacttccctggccagcccgacatgtggaaagaccattttaagccagacttctcccatattaagctga +ctctagccccccagggtgggtttgacaaaaacggcaacaccccacacggtaagggtaccatgcggtccctaa +cccagggatccctaaccgcaagagttgcaggtcttgtccatgagaggagagacgagtttcagctccaaggaa +atgacctacaaacatacaattttgacaccaacagagtctccgcatttagaaaattggctgcagacaacaagt +atgggatcatggagacgatgagagtcggtgcggcgctcaagagcgtaaagaccctggaagatctcaaagttg +cattgagggacgtgaaattcaacgagtgtgaaataatctacaagagctccaagtaccgagtctcctccaacg +gtaaaggttcagtttctgttgacaaagttgaagacaatgcatcccagactgtgaacgaggtacattcagcac +ttctcagacttaggcaagcgagggccagatactacatcagctgtttccaagacctcgtttataccctcatac +aggttgccggggcatcattcgttgtca---------------gtagga------tctccagaaggttctgct +gggaaaggtggatcaaaccgaccgagac-------------ccaggaagtgaatgagtccga-----aaagg +aagtagctcagggta---gatgggaagttgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctctagtaaaggcctaagtgatgaagagtatgacgagttca +agagaatcagggaagaaagaaacgggaagtactccattgaggaataccttcaagaccgagaccgctat---t +atgaagaagtagcggttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaga +gaattttccgccccacaaggaaacagaggaaggaggaaaggggtgtgcttggcttggtcaccggctcagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgaaaggcttgattttgaagcgccccctagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggaactcttt +ggagttgaaatcaaacaaatccaagtccataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgttacaggactagtgctggaggaaggcgccccagagggcactgtctgttctgtgctcgtgaaa +agacccacaggtgagatgattccccttgcagtgagaatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgctcctcacaggagcaaacgcgaagaacatggatctcggcactggccct +ggcgactgcggctgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgtacacaccgcagca +gcccggggaggcaacactgtcatatgtgctacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggagccccaattctgggccctggtaaagcgcctaaactcagcacgaagaccaag +ttctggcgctcatcaccagatgccttaccacctggcacatatgagcctgcttacttaggaggcaaagaccct +agagtggaaagaggcccctccctgcagcaagtcatgagagatcagttgaggcccttcacagaacccagaggc +aaaccacctagacctgcaatcttagaggaagccaaaaagacagtgatgaatgtcctagaacaaatcattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggacaaaaccacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaggatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcagaccttggcacaatgatcaggtgc +gctagggcttttggtggtcttatggacagcatgaaggcaagctgtatagctcttccttgtagggtaggaatg +aatatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaacccaacaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctctg +ctgaaccagaact-agcacaagtggttgcagaggaccttttggctcctagccagctcgatgttggcgatttt +gtcatctcagtccaggagggcttgccatcaggagttccatgtacatcgcaatggaattcaatagcacattgg +atactgactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgtttt +tcattttacggggacgatgagatcgtcagcactgacattaaccttgaccccatgaagctaacacaaaaactc +agagagtatggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgtttctacgtaggtcaattgcccgggacccagctggctggtttggaaaattggaccaggattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtatgagagcatggttcctcattcc +cagagggccacacaactcatggcccttcttggtgaggcctcactacatggtccccagttttacaagaaggtt +agcaaaatggtcatcaatgaaatcaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttc +agatggatgaggttctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgttgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagctcctgcaggtgagtttacagtctcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctatcttgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccctcacaaattacgatgtgtcctcatgt +tataattgatgttagacaattagaaccagtcctgttgcctatgccagacattaggaacaatttcttccatta +taatcagggtaatgat---ccaaaattgagattgatagccatgctttacactcctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgcagggtcctcactaagccgtcacctgattttgaattcacattctt +agttccccctactgttgaatctaagaccaagcagttcacattgcccatcctcaaaatatcagagatgaccaa +ttcaaga---ttcccagtaccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggaagggtcacacttgatggcgagctattgggcaccacacccttgttggcagttaacatctgcaagtt +caagg-----------------------------------------gagaggtgatagctaa---------- +----------gaacggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacaccgatggcaccccaattgaccccacagaagacacacctgg +ccctattggttcacctgacttccaaggcatactctttggcgttgcgagccagc---gcaacaagaatga--- +------------acaaaa-----ccccgcaacg--------aga-----------gcccatgaagctaacat +taacactggtggggaccagtatgctcccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccaacccacag---------------------------tcttcaccccgg- +--------ttggtgtggcaggtg---acactt---------cccaccctttcagacaatgggccctgcctcg +atacggtggacat-ctgacc------aataacacccatttggctccagcagtggcccctttattcccaggtg +agcagattctgttctttagatcccagataccta------gctcaggcggtca------tgaat--------- +--taggttacatggactgcctcgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctttttgaggccaagctgcataa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggtcaatcagttttattcacttgcccccgtgggaactgggaatgggcgcagg---------ag +ggttc---------aataatggctagtgctttctttgcaaatttggcaggaggcgtcgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaagttgagtttgactataacaaacaa--- +------------------------------ctccaaaatgcatctttctcccatgataaagaaatgctccaa +gcccaaattgaagccactaaacatctacaacaagagatgattaacataaaacaaggggtgctgacagctgcg +gggttctctcctacggatgccgcaaggggctctgtcggtgcgccaatgacaaaattagttgattggagcggc +actagatattgggcacctggtgccatgaggacgacaggttattcagggactttcacccacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaatta--------------gacaaccccttaaag----------------------------------- +----------------------------------------tagatccttctccctc---------------- +---ttctt-----------cgagtgg------------ttcctctgtttcctctg----------------- +---------------------tcaaaacaca---atcaactaccctctcggg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------caaccaggtc +gggtac-------------------a--------------------aggacttcagattgggtgcgtagcca +aaatgagaggttgagcccttacatga---atggagcgctgcaaacagcgtatgtaacaccaccatctagtag +ggcatca---actg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccgctcttcgccc +acctccgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaagtttgattagtttgttcttttcttt------ta-ctgttcct---ttaattcttt +c------------tttt-----------aaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MT707683.1/1-7594 |Norovirus GII isolate KMN1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtcgaat-gacgtcgttactgcccttggcagccag---aaagctaccaat +g------ac----agctatagcacacccccccccaacaaggaggaggc------tagtgtgcttgccaacgt +taaagttggctttaaaaaga----tcctcggggccgtccctaaggctccg-------------aaacagcat +ggcagcat----------------acaaaaaccgccgatcgtcgagatcgatggtgtggccatgcgtgtacc +ctc-----------------------------tccccccccaaacgg------tgaggac------gcagtc +cgcttcgtga----------aggaaacggagaccatcaagggactaccagatttgtccaccgt---ggagaa +cgaatctgaacactccccgtacacagtccccccgttgagtgagagggagcacaggccagcaacagagccatt +gcccggcactatacttgagatgtgggatggtgagttctatcactactccatatacgtggacaatggcaaggc +ccttggtgttcacaaaccaccagcagcaattagcctagcaacgatagatttgacacctatatcgttgtactg +gagaccggtttacacaccgc---cgtaccttgtccacccagagacgctcaagggactggctggcgaaaagtt +tccctacacggccttcagcaacaactgctacaacttctgttgctgggttctggacctcaatgattcatggtt +gaa---ccggagatccataactagaacaactggattcttcaaaccctaccaatcctggaataggaaacccct +tccaactgtggatgatggcaagatcaagaaggtcgcaaatgcagttctgtgcgccctaggatcacttttctc +caagcccattaaagacctccttggtaaattgaaaccactcaatctcctgaacttgcttgcatcatgtgactg +gacctttgctggtgtggtggagacagttattcttgcagcagagctcttc---aatgtcttttggactccacc +tgatgtctccaacttcattgcttccataattggcgacttcgagatgcaaggaccagaggatcttgctgtgga +gcttgttcctgttatcatgggaggcattggtatggtgttgggattcacagctgagaagatagggcgtatgtt +atcatctgcagcatccactctcagggcttgtaaggaccttggcaattacgccttagacatcctgaaactagt +catgaagtggtttttccctaaaaaggaggaaaaggccgagatggaaaccctgagggccattgaggacgctgt +ccttgacatggaggcaattggaaacaaccacctcacaacactgctcaaagacaaagatagcttgagtgccta +catgaagaccttagacatggaggaggagaaggctaggaggctctccactaaatcatcatcacccgacattgt +tggcaccatcaacgcgatcctcgcacgcattgctgccgcaaggtcactcctacacaaagccaaagaggaaat +gttcagtcgagcgaggcctgttgtcgttatggtgtctggaagacccggcatcgggaagacatatctggctag +acagcttgccaaatcgattgcaaacagcatgagtggtgatcagagagtgggactcgtcccccgcaatggggt +tgaccactgggatgcttataggggtgaaagagttgtcctatgggatgactatggcatggggaatacaatcaa +agatgccctgaccctacaagagttggctgacacctgcccagttaccctcaactgtgacaggatcgaaaacaa +agggaagatgtttgacagtgatgtcatcataataacaaccaatcttgtcaaccccgctcccctcgattatgt +taattttgaggcttg-ctgtaggcgaattgacttccttgtttatgccgaggcaccggacattgagaaagtca +aaaaggatttccctggacaacctgacatgtggcgtgatcattttaaagctgactcgtcacacataaagttat +cactagccccacagggtggttttgacaagaacggaaacacccctcacgggaagggcaccatgaaaactctca +cgctacactcactcactgcacgtgtgatgggtttagtgtgtgagaggaaggatgagttccaactacagggtg +atgaactacaggtttataactttgacacaaacaaggtctctgcatttagaaaactagcagctgacaacaagt +acagttttgtggagacaatgaaagtcggtgcagtcctcaagaatgtaaaaaccctggaagatctgaagtctg +ctctcaagggagtcaaattcaaagagtgtgaaataatttacaagggggccaagtatagagtcgcctcggatg +gctgtggcagtgtctcagtttccaagatcaaggatgttgtgtcgcagacagccaatgaagtgcacacagcgc +tcctgagattgaggcaagcccgggccaggtattacatcagctgcttccaagacctcatatacaccctaatac +aggttgctggagcctcatttgtggtgc---------------atagga------tctcaaagagattctcat +gggaccgctggatcaagcccagtgatag----------ccctcaggaggaagaacaacccag-----cagtg +aggtggccacaggga---gatgggaaattgagccaaaagacacagaccctgaaggcaaaaagggtaaaaata +agaaaggaaggggaaggaaacacacagctttctctagtaagggtcttagtgatgaagagtatgatgagttca +aaagaatcagagaggaaaagaacggcaaatactccatagaagaatacctccaggaccgtgacagattt---t +acgaggaagtggcagttgcaagggcaacggaagaggacttctgtgaggaagaagtggcaaagatcagacaga +gaatcttcaggcccacaaagaagcagaggaaggaggagcggggcatcctagggctggtcactggttcagaaa +tcaggaagagaagaccagatgactttcagcctaaaggcaacttgtgggctgatgacaccaggagcgtggact +acaacgaaaagctggagtttgaggcccctccaagcgtgtggtcacgtatcgtacccctcggcactggctggg +gtttctgggtctcct-ccaacctcctcataacaacaacacacgtcctgccaaaaggattgaaggagctgttc +ggggttgacatcaaacaagtccagatacacaagtcaggtgagttctgcaggttcaggtttccaagaccaatc +agaccagatgtcacaggcctcatccttgaagaaggggcccctgaaggcacggtgtgttccatccttgtcaaa +agaccgactggagagatgataccacttgcagtgaggatgggtacccacgcttccatgaaaatccagggtaga +acggttggtggtcaaatgggcatgttgctcacaggagcaaatgccaaaaacatggatttgggcacgaaccct +ggtgattgtggatgcccgtacatttttaagaggggcaatgacattgtggtagctggggttcacactgcagct +gcgcggggtggcaacactgtgatctgtgccacgcaaggagctgacggagaggccgtcctcgaaggaggagag +gacaaagggacgtactgtggtgccccaatacttggacttgggaaggcccccaaactcagtaccaagacaaag +ttctggcgatcctcccctgatgcgcttcccccgggaacgtatgagccagcatacctaggtggaaaggaccca +agggttgagaagggcccgtcgcttcagcaggtcatgagagaacaacttaaacctttcaccgaacccagagga +aaacccccaaaacccaacgttcttgatgaggcaaagaaaactgtgatgaacgtgttggagcagactataaac +cctgccaaaccctggtcatactcccaagcatgtgcttcgcttgacaagacaacttcaagtggtagcccgcac +cacctgagaaagaatgatcattggaatggtgaatctttcaccggccctttggccgaccaagcttcaaaagca +aacctaatgtatgaacaggcaaaacacatgagccccgtttacactgcagccctcaaagatgagctggtcaag +actgataagatttacaagaaaataaagaagaggctgctgtggggttctgatctgggtaccatggtcaggtgt +gccagggcttttggtgggttgatggatagcatgaaagagagttgtgtggtgttaccctgcagagttggcatg +aacatgaatgaagatggaccaatcatttttgacaaacatgcaaaatacaaatatcactatgatgcagattac +t-ccagatgggattccacacaacaaaggagcatcttatctgctgccatggaggttatgg-tgaagttctcag +ctgaaccagagct-ggcacaagtggtcgctgaagacttgctcgccccaagccaactcgacgtgggcgatttt +gtggtgtcagtccaagaaggtctcccctcaggtgttccgtgcacttcccaatggaactccatagcacattgg +atcattacccttagtgcaatggcagaagtttctggtctctccccagatgtgatccaagctcactcatgcttc +tctttctatggtgatgatgagatagttagcacagacatcaacttagacccagcaaagctaaccttaaaactc +agggaatacgggttggtccccaccagaccagacaaaactgaaggcccattagtcatcacagaggacctccat +gggttgaccttcctacgcagacacatcacacgagatcctgctggatggtttggaaaattagatcaggattca +atcttaaggcaactctactggactagaggacccaaccatgagaacccctacgaatgcatggtcccacactca +cagcgcgcaactcagttaatggcgctgttgggtgaggcatcattgcacggtccccagttctacaagaaagtc +agcaagatggttatcaatgaaattaagagtggtggtctggaattttacgtgcccagacaggaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatctggctcccgacggtgtgaatgag +gatggcgtcgagtgacgcgcccgtttctggcaccgatggtgcggcaggactcgtcccagagagtcaacaaga +agtcttgcctttagagcccgtcgcaggagttcagctggctgctcccgtagcagggcaaagtaatataattga +cccctggattagaatgaattttgtacaagccccggccggtgagttcactgtttcccctcggaacgcaccggg +tgaggtgcttattgatttggaattaggaccagagttaaatccctatctcaatcaccttgcaagaatgtacaa +tgggtatgtgggaggaatggaggtggaagttgtccttgccgggaatgcgttcacggc---gggtaagatctt +attcgcagctgtgccccccagcttcccaacccatggcatttctgcagcacaggctactatgttaccacatgt +gattgtggatgtcaggcagctggagcctgttcggctccctcttcctgatgtcaggaatgtgatgttccattt +ctgtcaagaaaataaggagccgcgcatgagaattgtggcaatattgtacacccctctccgtgccaacggtgc +gggtgatgatgttttcactgtctcatgtcgtgtgctaacaaggccctcaccagattttgattttattttctt +agtccccccctctgtagagagtaagctgaaacagttcacccttccaaacctgcagccaaatgaaatgaccaa +ttcaaga---ttccccactggtatcacacaactctacaccagtccaaataccaatttggttgtccagttcca +aaatggcaggtgtctgcttgatggcacacttctcggcaccacccctgttagagctgctgacatctgcagttt +cagag-----------------------------------------gagtcacctcaactgaa--------- +----------------------------gt----------------------------tgatgcaactg--- +--acagttccaga--------gtggcagggt----------------cgcataga----------------- +----------attatggtgcagctcaaggagccagatggagaggagttttcacctacaggtcccaaccctgc +ccctgttggcactccagactttcaagcagccatatttggcaccctcagtcaaa---gaaacactggcggg-- +------------gctggg---cagaattccaac--------aga-----------gcccacttcgcatattt +ttacactagaaaccccacatttgcaccaggcatagggacagttgtgtt---tt---------cttttgatac +tactgattt---tcagaatcgccaacctacta---------------------------aattctcccctt- +--------ctggtgtgtttgatgatgattctt---------ctgaaccttttaatcaattttctctaccata +ttataatggatca-ctcggtgcagtggatgctgggaagctagctccgcctgtagcacccaactacccaggtg +agcagattctttattttagagggaatattccct------tcaaaggtgggta------tggag--------- +--agggtgaaattgatagcttgctcccccaggaatggatcacccacttttatgcagagcaggctcctacaca +aggtgacgcggccctgctgcgttactacaaccctgacactggcagagtcctctttgagtgcaaactccaccg +cgagggattcatcacaatcaattacacagggtccaatgctcttgctgtaccagtcaatggagtcttcaggtt +tgagggctgggttaacaaattctacacactgacccccatgggaaatggcaatggccgcaggggtagaagaag +ggagt---------tataatggctggagctttctttgcaggtcttgcttctgatgttctcggcagcggtttg +tcttcacttatcggtgccgg---tgccaatgccataaatcaaaaggttgaatatgattacaataggcac--- +------------------------------ttgcagtcagcttcttttcaacatgataaggatatgctcaac +tcacaggtggaagccacaaagcacttacaaagggagatgatggccatcaaggaaggcatgctgctcaagggt +gggttctcccccactgatgcagcaagaggagctgtcaacgcccctatgacacaaatcttggattggaatggc +accagatactgggccccgggtgcgatgaaaaccacggcttactcaggccgttttgttagccaatccactcac +ag-----------gcctattcccaatgttg------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------tgcacaagagtgatggaccc------------------------------------- +--------------------------ataca---ccaaactgggtcaacca-------cagg--------gt +ccatttc----t---tctctct----------ccacatcatccacccgtgttc---------catcatccat +atcctc-------------------atcta-----gtagtgcttctagaacaagggactgggtgtctgaaca +g---caaagactcagcccttttatga---gaggctctcttcacactgcatatgtgactcctccctcaagctc +tgcctct---tcag------------------------------taagtt---ctgtttctacagtcccaca +ctatgttttaga-ttcatggaccccttctt------------ttaacactaaacatttgcctttgtttgctc +atgttaggaaaaggggacaatctca--------agtttaa--tctaccactcatggtttgattg-------- +-------att-tgttttg--taattagtgaaat-gttgattc-------t-ttctaatt---c--------- +--------------------ggcatttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaa----------------------------------------- +- +>MT712130.1/1-7533 |Norovirus GII isolate Hu/US/2011/GII.6[P7]/CA-RGDS-1086, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgtccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatttagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttatcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaggaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcgaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgacttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaatgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacaacctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaatacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MT712147.1/1-7533 |Norovirus GII isolate Hu/US/2014/GII.8[P8]/CA-RGDS-1087, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgtccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatttagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttatcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaggaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcgaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgacttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaatgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacaacctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaatacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MT712157.1/1-7569 |Norovirus GII isolate Hu/US/2016/GII.4 Sydney[P31]/CA-RGDS-1089, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgtc------------aacggc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttcagggctgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagctattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttgcatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaagaacataatagggaagttgaaacctcttaacatccttaacattctggctacgtgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtaga +actggtccctatagtgatgggggggataggcttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaagttggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcgaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggaacttgctgacacttgccccctaacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcatg-ctcgaggcgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatgggaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtataatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaacgaactagccggcgccc +tacatcacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaaacgcatga------atgtacagaatctctggt +ccaagccacaggtgggagacacagaaga--------gatgatcaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggatagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaattttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccaaatacacaaatcaggtgaattctgccggttgaggttccctaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctactgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccctcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaaaaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccagaaatggtcattttcacaagcttgcgcgtcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggcgcacttaaagatgagttagttaag +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtacaggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cggaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatatctgaagacctagat +ggcctaacatttctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggtattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccttacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagagcctgtactgattcccttacccgatgttaggaacaatttctatcacta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatctcccgattttgatttcatattcct +agtgccacccacagttgagtcgagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcactggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttagcttctcaaaattggaataattatgacccaacagaagaaaccccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccacgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gctgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgtcacagtggctcacactggccaacatgatttggtcattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttcttcgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tatccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgtagttactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgttcgtcaccccaccgtctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaaagt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MT720841.1/1-7506 |Norovirus GII isolate Hu/US/2015/GII.13[P16]/CA-RGDS-1088, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggggggattggtttggtgttgggattcaccaaggagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaagaggccaatgagctagccatggtgagagctatagaagatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgccctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtggtcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgaattttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaagtcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctcctagcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagctaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccacctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttatacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctactaccaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatatgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaacaaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagtcattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcgt-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ctacctcct----caggggggtcctctacaacctcc----------------t------------------c +cagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctttta +a--atgtgattttattt---tccttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MT724793.1/1-7536 |Norovirus GII isolate Hu/US/2016/GII.2[P2]/CA-RGDS-1090, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggcgtgtctggtctacctgagctcacaacagttggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatatctcccgactccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgctttctgctgttgggttttggatcttaacgactcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaataggaagcccct +cccaactatggatgactcaaaattgaagaaggttgcaaacatcgttctgtgtgcattgtcatcactgttcac +tagacccattaagaacataattggcaaactcaaacccctcaacatcctaaatatcctggcctcatgcgactg +gacctttgctagcatagtggagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtcatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacgggttggagatcctaaaactagt +tatgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +actagacctggaggcaattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaaactatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagtagaccaaggccagtcgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaattgcatcaacactcacaggagaccaaagggtgggtctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacggtatgagcaatcccatcca +cgatgcactgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagacttccttgtgtatgccgatgccccagaagtcgagaaagcaa +aacgggacttccccggtcaaccggacatgtggaaggacgcctatcgctctgatttctcacatattaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgaaagattagatgagtacgagttacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcaggaatgtcacgaccatggacgaactcaagaagg +ctatcaaaaacattataatcaggaagtgccagatagtctatggcggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgttgttgagagggtgcagagcaccagcgtgcaaattaacaatgagatcgctggtgcag +tgcatcaccttagatgtgccaggataaggtactatgtcaaatgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acattcaaaatttatggt +ccagaccattaactgaagaagcagatga--------ggcaaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcggatgacatcaagccagagggcaagaaaggtaagaaca +agagtggccggggcaagaaacacacggcattttcaagtaaaggtctcagtgatgaggagtatgaagagtaca +aaaggatcagagaggagagaaacggcaaatactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgccaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaatccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagtgtcgact +acaatgaaagaatcagctttgaggccccaccgagcatttggtctagaattgttaactttggttctggatggg +ggttttgggtgtcac-ccagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggttcaaatacacaaatcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacggatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaagggcgc +acggtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctacatttacaaaaggggcaacgactacatagtcattggagtccacacagcagcc +gctcgtggcggaaacaccgtcatctgcgccacacaaggtagtgaaggtgaggcaacactcgagggtggtgat +aataaaggaacatactgtggggcaccaatcctaggccccgggaacgccccaaaactgagcaccaaaactaag +ttctggaggtcctcaactacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggt +aaaccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagac +cccccacaaaagtggacgtacacgcaagcgtgcgcgtcccttgacaagaccacatctagtgggttcccccac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgactccagtttacacagctgcccttaaggatgaactggtcaaa +accgagaaagtgtatggaaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggcggtctgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatataggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccttgcacctctcagtggaattccatcgcacattgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattggacccagaaaaactgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgattatcagtgaggatctgaat +ggcctgactttcctgagaaggaccgtcacccgtgaccctgcagggtggtttggcaaactggaccagagctcc +atacttaggcaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccagtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgtaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttagctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacaacaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgtcttattaccactccctgatgttagaaataatttctttcatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttagatcaaatggctc +aggtgatgatgtgttcacagtctcctgtagggtgttaactaggccctcccctgactttgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaacttgaatggatccccttttgacccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtattatctcccaaa---gggacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtacctgccaatggatacttcaggtt +tgactcttgggtgaatcaattttattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtggctggtcttgcaggggacgtgctcagtaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgacaaggaaatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccccgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggccc---------------acgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaagaccaactttg +accacaaccactgggt-----cctcacttgg------tacagcttcatc----------aaattcg------ +-------------------------------actcgcagtactaacctctcccaatcaacagtttccagagc +tacgtc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgcaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------a-tt------------------g +-------a-----tctt---accttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MT725762.1/1-7566 |Norovirus GII isolate Hu/US/2017/GII.4 Sydney[P4 New Orleans]/CA-RGDS-1091, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acttatagtg----------ttaa---ggatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtacacaagccaccagctgccatcagcctcgctaaggttgagttggcaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtctggggaaacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctatttac +caggcccataaaagacataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtagagtccctgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagaaaaaattgggaaaatgtt +gtcatcagctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggtgaccagcgtgttggtctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +ggggaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggacgtcaaaaccatgccagaactcaaacaag +cactcaaaaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaacatagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacgggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggagattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccaggacgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagagatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaggaagagacttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttt +tctttttatggcgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +aaagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggacccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaagatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttccgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgacggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaactggaacaattatgatccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggcaacaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgagttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgcttcaa +gcacaagttgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgcttctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccgcccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------ggactaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctc--------------------- +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MT726225.1/1-7568 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P31]/CA-RGDS-1092, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttatctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaagccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggtctgtacgtggaacgaggtcttgt +acttggtgtgcataagccaccggcagctatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggaggttgcacggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgatccagagaacaacaggtttcttcaggccataccaggattggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcgctattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gactttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtccctatagtgatgggggggataggtttggtgttaggatttaccaaagagaagattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagtttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaacccacctcgccag +ggagcttgccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatgggatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaatccagcaccactggattatgt +caattttgaagcatg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttactccacgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctaatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaggtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaggacacagaaga--------aatgaccaacaaagatggctgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaacttcggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacaacaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggcaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgtggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacaccgtcatatgcgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacgtactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccctcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacttccagcggccacccgcac +catatgcggaaaaacgatggttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacttaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgactatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccccagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaaacctggat +ggcctaacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacagagttca +attcttagacaaatgtactggactaggggtcccaaccatgaagatccattcgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggatcagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatctaaatccctatctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtactgattcccttacccgatgttaggaataatttttatcatta +taaccaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggtgatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagacggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ccgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtggtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atctggctatgttacagtggctcacactggtcaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagtcaagcaggcaatgctcctagagggt +gggttctctgagacggatgcggcccgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctgggatcacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagagatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctc-----------ctaac------------tcttctgtcgctactt-------------------- +----------ctgttt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>MT729788.1/1-7564 |Norovirus GII isolate Hu/US/2018/GII.4 New Orleans[P4 Yerseke]/CA-RGDS-1093, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaagtatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgatatagtggtt +tcttacagtg----------tcaa---agatggtgtctccggtttgcctgacctttccaccgtcaggcaacc +ggaagaagttaacacggccttcagtgtccccccacttaatcagagggagaatagagatgctaaggagccact +ggttggaactatcctggaaatgtgggatggagaaatctaccattatggcctgtatgtggatcaaggtcttgt +actgggtgtgcacagaccaccgtctgccgtcagcctcgccaggatcgagctggcaccactctccttgtattg +gagacctgtgtacactcccc---agtacctcatccctccagactcactcaagaagttgcatggagaaacgtt +cccctacatagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaatgactcatggct +gag---caggaggatgattcagagaacaactggtttcttcaggccttaccaagattggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaatgtattcctgtgtgctctggcttcactaattac +caggcccattaaagatatagtagggaagctaaagccccttaatatcctcaacatcttagcttcctgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcaatgattgcccccttactcggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggcttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagattctaaagttggt +catgaagtggttcttcccaaagaaagaagaagcaaacgaattggctatagtgagatctattgaggatgcggt +cctggatctcgaggcaattgagaacaatcacatgaccaccttgctcaaagacagagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactttcaaccaagtctgcctcacctgatattat +aggcacaatcaacgccctcctggcgagaatcgctgctgcacgatccctagtacatcgagccaaggaggaact +ttccagcagaccaaggccagtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaaaaagatcgcagcttcccttacaggagaccagcgtgtaggccttgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagagtcgtcctatgggacgattatggaatgagcaatcccattca +cgatgccctcagattgcaagagcttgctgacacttgtcccctcactctaaactgtgataggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactagactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaagtcgagaaggcga +agcatgacttcccaggtcaacctgacatgtggaagaacgccttcaaacctgatttctcacacataaaactat +cattggccccacagggtggctttgacaagaacgggaacactccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcgtcggggctactccatgagaggttagatgagtttgaactacagggcc +caactctcaccaccttcaatttcgaccgcaacaaagtgcttgcctttagacaacttgctgctgaaaataagt +atgggttgatggatacaatgaaggttgggaaacagctcaaggatgttaaaaccatgccagagctcaaagcag +cactcaagaatatctcaattaagaagtgccaaatagtgtatggtggtgccacctacagccttgaatctgatg +gcaagggcaatgtgagagttgacagagttcagagcgcctccgtgcagaccaacaacgaattggctggtgtcc +ttcaccatttgaaacacgccagaatcagatactatgttaagtgtttccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgccaagcgcatga------acattcaaaacctatggt +ccaagccacaagtagagaacacagagga--------aaccaccagcaaggatgggtgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtatgatgagttca +agaggattagagaagagagaaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaagtggccattgctagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +tcaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgaaagaagtgtggact +acaatgagagactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggggtccccatcaaacaaatccaaatccacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcctagaagaaggtgcacccgaaggtaccgtggccacactactcatcaaa +aggtccactggggaactcatgccactagcagctaggatggggacccacgcaaccatgaggatccaagggcgc +accgttggaggccaaatgggtatgcttttgacaggatccaacgccaaaagcatggacttaggcaccacacct +ggtgattgtggctgtccctacatctacaagagagggaatgactatgtggtcattggggtccacacggctgcc +gcccgtggtggaaacactgtcatatgtgctacccaggggagtgagggagaagccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcaccactcccacctggcacctatgaaccagcctaccttggaggtaaagacccc +agagtcaagggtggcccttcactgcaacaagtcatgagggaacagttaaagccattcacagagcctaggggt +aagccaccaaagccaagtgtgttagaagccgccaagaagaccatcatcaatgttcttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcatcccttgacaagaccacttccagtggccacccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctagcggaccaggcctccaaggct +aatctgatgtatgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggatgaattggttaaa +actgacaaaatttatggtaagatcaggaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtatcacacttcccattagagtaggtatg +agcatgaatgaggacggccccatcatcttcgaaaggcattccaggtatacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacaaagagccgtattggcagcggctctagaaatcatgg-tcaaattctccc +cggaaccacattt-ggctcaggtggtcgcggaagaccttctttcccctagcgtggtggatgtgggcgacttc +acaatttcaatcaacgagggtctcccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcactctctgaagttacaaacttgtcccctgacaccatacaagctaattccctcttt +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacaacaaaactt +agagaatatgggttaaagccaacccgccctgacaaaactgaaggtccccttgtcatctctgaagacctgaat +ggcctgacttttctgcggagaactgtgacccgcgatccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaagggttctaaccatgaagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaagccgctctccacggcccagcattctacagcaaaatc +agcaagttagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctaa---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgctggtgccgctcttgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagccgctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctggtttgaatccctacctttcccatttggctagaatgtataa +tggttatgcaggtggctttgaagtgcaagtcatcctcgcggggaatgcgttcaccgc---cggaaaaattgt +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgtttccccacat +aatagtagatgttaggcaactggaacctgtgttacttcccttacccgatgttaggaacaatttctaccacta +cactcaatcaaatgat---cccaccctcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgtcggattcttacgagaccatcccctgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccgttctctgtcccaatattaactgttgaggagatgaccaa +ttcaaga---ttcccaatccctttggaaaggctgttcacgggtcccagcagtgattttgttgttcaaccaca +aaatggcagatgcacgattgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaactt +cagag-----------------------------------------ggggtgtcacccaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaag----------------------------------catacaca----------------- +----------------atgaatctggcctcccaaaattggagcaattatgacccaacagaggaaatcccagc +ccccctgggtaccccagacttcgtgggcaggatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagcgggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggagatgcctacttcaccccaaagctgggcaaaattcgattctcca---------ctgatacaag +tagtgatct---tgaggccaatgaaaacacga---------------------------aattcaccccag- +--------tcggagttgtccaggatggtagcaccacccacaaaaatgaacccaaacagtggatgctcccaga +ttattcaggtagg-gatacc------cacaatgtgcatttggccccagccgtgtctccctcgtttccaggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcacttctatcaagaggcagccccagcaca +atctgatgtagctctgctaaggtttgtgaatccagatacgggtagggttctgtttgagtgcaagctccatag +acaaggttttgccacagtggctcacactggccaacatgatttagttatcccccccaatggttatttcagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcttctgatgttcttggctctggactt +ggctccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcttttcaacatgacaaagatatgctccaa +gcacaaattgaggccaccaaaaagttacaacggggaatgattgagactaaacaggcaatactcctagagggt +gggttctctgacacagacgcggcccgtggggcaatcaacgcccccatgacaaaggctttggattggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +tc---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaatta------gggttgc------------------------------ +------------------------------tgctcccactcgggattcctct------------------ag +tatatctt-----------ctaaa------------tcttctactgctaatt-------------------- +----------ctatgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgactttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcttga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcta +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ttttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>MT729791.1/1-7561 |Norovirus GII isolate Hu/US/2018/GII.17[P17]/CA-RGDS-1094, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggatt +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactctcaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtacaatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcacagaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaattaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------accacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggcccccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacagacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtccctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctacccatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------gat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MT526278.1/1-7450 |Norovirus GII isolate 846-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccgagaccaccaactcccgagttggtt-------aagaggatgcc +ccc-----------------------------tcccccacctaacgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcattgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaggacaaagacagcctagcgaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +gtctagcaggataagaccagtggttgttatgatatctggcaagccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagagctcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgacg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaattga--------atcagagactaaggaagaggcccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtctcctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccgacgagacaatgataccccactct +caaagacccatacagcttatggcactgcttggtgaggcctcccttcacggaccctccttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaatttatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtatacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatctgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgctctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctataatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctctt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT362912.1/1-7553 |Norovirus GII isolate 432-1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtacacaaaccgccagctgccatcagcctcgctaaggttgagttggcaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggggaaacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtagagtccctgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgatcttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +gggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaatacagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacgggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacagggtccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagagatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-taaagttctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgacaccatacaggctaattctctcttt +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +aaagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaagatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttccgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgggttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgcttcaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------ggactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctc--------------------- +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT362913.1/1-7539 |Norovirus GII isolate 432-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgctaccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtacacaaaccgccagctgccatcagcctcgctaaggttgagttggcaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtctggggaaacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtagagtccctgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgatcttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +gggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaatacagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacgggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacagggtccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagagatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-taaagttctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgacaccatacaggctaattctctcttt +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +aaagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaagatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttccgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgggttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgcttcaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------ggactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctc--------------------- +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT362914.1/1-7489 |Norovirus GII isolate 813-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------taccgttgccgttgcttgc------------aacaac +a------ac----aacgataaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgggagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaagccttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagagccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtggggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggcccttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tc-------------tattta +g-g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT362915.1/1-7500 |Norovirus GII isolate 813-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------tctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgggagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagagccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtggggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggcccttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tc-------------tattta +g-g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT362916.1/1-7507 |Norovirus GII isolate 813-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgggagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagagccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtggggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggcccttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +ac---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tc-------------tattta +g-gatgtat--------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT362917.1/1-7515 |Norovirus GII isolate 963-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgttactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccggacactctcaagaaattgtccggagaaacgtt +cccctacacagcttttgacaacaactgttatgctttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaagcccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagggtcgttctatgggacgattatggaatgagcaaccctattca +cgatgccctcaagctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgaaggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaagaagaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcctagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgtcgggggccagatgggcatgcttttgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagggcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacggatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcctgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaagagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcta---------ctgacacaga +caatgattt---tgtaactaatcagaatacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactgttaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatccccccaaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgccaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctgttgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT409884.1/1-7532 |Norovirus GII isolate 236-1 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgccgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgctgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatcccccgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgttatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaaacacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgtcggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttctgacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagctgtgttggcggcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattgttcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggttggtttggaaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgctgggagaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacacgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgtaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggaatcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +gaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgaggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgaggcagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaacgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataacaaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-atttgatttg------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT409885.1/1-7525 |Norovirus GII isolate 236-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------agat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgccgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgctgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatcccccgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaaaccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgttatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaaacacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgtcggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttctgacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagctgtgttggcggcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattgttcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggttggtttggaaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgctgggagaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacacgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgtaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggaatcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +gaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgaggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgaggcagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaacgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataacaaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-atttgatttg------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT409886.1/1-7488 |Norovirus GII isolate 236-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccctaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgccgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgctgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatcccccgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgttatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaaacacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgtcggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttctgacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagctgtgttggcggcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattgttcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggttggtttggaaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgctgggagaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacacgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgtaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggaatcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +gaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgaggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgaggcagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaatttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaacgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataacaaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggt---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT409887.1/1-7501 |Norovirus GII isolate 727-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtgtcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggact-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaatacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatactaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gctcgtacccgtggtcatgggtggcataggaatggttctcggctttaccgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattacgctcttgacatattgaaattggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgctgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcaggcccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggatcattttaagcaagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtctcgttcacgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgtagacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggatatagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaagacttctgtgaagaggaggaggccaaaataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +aggccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcctagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtatatacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctaccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctagcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaactcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaacctcgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttatactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggagaggcttcactgcatggtccccagttttacaagaaagtc +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatttgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaacagattctttcatta +taatcaggaaagtacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgaattcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccccattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagatatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgagcgagga----------------accaccct----------------- +----------ctccacgtccagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatgggcaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +atccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcattactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatcctttaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttttgcatctactgctccttcac----------------- +---------------------aatcaactca---ttcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccgccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-ag----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT420909.1/1-7263 |Norovirus GII isolate 510-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------gagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggagcgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggttgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggaactggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccctctcacgctgaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctggacgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagctcgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgcccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatctgatgacatcaaaactgagggcaagaaagggaagaata +agtccggccgtggtaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgagttctgccggttgagattcccaaaaccaatc +agaactgacgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggtcacactgctcatcaag +agaccaactggagaactcatgcctctggcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +acagtcggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aataaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcgtttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacgcttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaaactgacaacaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaggggccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaagatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgttccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatactccactcagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaggctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacccctacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +cagcaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgttcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcctctactgctacta-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474032.1/1-7503 |Norovirus GII isolate JH11 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------agaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaataccgctctctttgttctg +gagacctgtatatacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaattctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgaaaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcagcctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccccatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagcccttaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +taaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaactatgaaaattcaggggcgc +actgttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtacaaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggtccagcattttatagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccacagaaatgaaccccaacagtgggtgctcccaag +ttacccaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggactggcatctgatgtcctaggctctggactt +ggctccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474033.1/1-7503 |Norovirus GII isolate JH12 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctgtcgttgttgctgttggc------------aacagc +g------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggggaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggttgagctaacaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtagagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaggatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaataagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggacagtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaaggaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaacttaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggacggccccataatctttgagaagcactccagatatagataccactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctccagtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatatcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ccaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474034.1/1-7503 |Norovirus GII isolate JH13 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaatcaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcatagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacattcttaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcgtccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggttagacgaatacgaactgcaaggcc +catccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgagctagtcggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaaatgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccatagccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggctcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagaactcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggcgacttt +caaatatcaataagtgagggccttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaagatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttaattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatactccactcagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttagaaaggctgttcacgggtcccagcagtgcatttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aacact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatatcacagtggctcacactggccaacatgatttggttattccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgagaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taaatttt-----------ctaac------------tcttctactgctacta-------------------- +----------ctgtgt-----attcaaatca------gactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgaacctcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474038.1/1-7503 |Norovirus GII isolate JH16 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcacaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggactgcctgatctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagcctcgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagatactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcattattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtggttgtgatgatatcggggagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaaaggcgaaagagttgtcctatgggatgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgaaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgttgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaggaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggctccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgtgcaggcttgcgcatcccttgacaaaaccacatccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacgatgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcccgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtattggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacagttgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +tagtcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttcttacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagttttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatactaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaacctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccat------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474040.1/1-7503 |Norovirus GII isolate JH19 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtacacaagccaccggcagccattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccgtaccaggagtggaacaagaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacattttcttgtgcactttgtgttcactattcac +cagacccattaaggacataatagggaagttgaagcctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +tatgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttataccacgcaatggtgt +cgatcactgggacgcgtacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccacgtcagacctcaagcaag +cactcaaaaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaaaggtagtgtgaaagttgacaaagtgcaaagtgccaccgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaaatgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcactaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacctaaa-- +-gat----gatgaag---agtttgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgacgagtaca +aaagaatcagggaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaattcaggtacacaagtcaggtgaattctgccggttgaggttcccaaagccaatt +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatctaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccttacatttacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatattgtggcgcaccaattttgggcccagggagcgctccgaagctcagtactaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccatttacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaggcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcgaaaaaatgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtgaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtaccactacgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtggttgcagaagacctcctttcccccagcgtaatggatgtgggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggtcctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaattttccaactgagggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---cctaccattaagttaatagcaatgttgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtcccctgtcaatatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaaggttcaaggcgtgctcacccaaa------------------- +-----cc-----acgaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagggttcagtttgaaa---------ctgacacaga +tcatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cacaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaaatcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtggatacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacttacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gggctaatcttagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +taaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtcacctttcatga---agggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgttt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474041.1/1-7335 |Norovirus GII isolate JH21 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------ccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttttg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcagggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacgggctggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaaatggctatggtgagatccatcgagaacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctacttaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctagcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcgtcagggttgctccatgagaggctagatgaatatgaacttcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaataaagatggttgcctaaaacccaaa-- +-gac----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaaaaagcacacagccttctcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaggaagagagggcctctctcggcttagtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaattcagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgccactggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagctttcggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgactat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacttcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcatccaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggttgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatc +agcaaattagtcattacagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +ttttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcacaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaagaacagatggctcaaca--------cgc-----------ggccacaaagccacatt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaggcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgaagctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcccct------------------ag +taaatctt-----------ctaac------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474042.1/1-7503 |Norovirus GII isolate JH22 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------agaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgagatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaatccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaga +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +accgttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggggtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatcgacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaaaaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagaccttctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtctcctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctaaaaccaactcgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attattagacaaatgtactggaccagaggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttatagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctaa---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatactcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatagaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctgggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacacgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttatcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474043.1/1-7503 |Norovirus GII isolate JH23 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccgcccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtctccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccagagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccattagccttgccaaggtcgagctaacaccactctctttgttttg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctacttaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctagcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgagtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgatagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaacttcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaggtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggagccgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgatgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaaaaagcacacagccttctcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaggaagagagggcctctctcggcttagtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaattcagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagacgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggttgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatc +agcaaattagtcattacagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +ttttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgatccctttacctgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttcacaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaagaacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaggcatccttccaatttagcagcaatttacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccccct------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474044.1/1-7503 |Norovirus GII isolate JH2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgtcgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcgggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatacgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagcgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacgtcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaggtacacaaatcaggtgaattctgccggctgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggatctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaatgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgttagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggtgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggttcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474047.1/1-7503 |Norovirus GII isolate JH34 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggagtggaacaagaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacattttcttgtgcactttgtgttcactattcac +cagacccattaaggacataatagggaagttgaagcctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggaaaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttataccacgcaatggtgt +cgatcactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagcttaaggatgtcaagaccacgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtaacacctacacacttgaggccgatg +gcaaaggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcactaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgacgagtaca +aaagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaattcaggtacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatattgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagggttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactacgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtggttgcagaagacctcctttcccccagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaaattagacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggtcctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtcccctgtcaatatctgcacctt +cagag-----------------------------------------gagatatcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaaatcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtggatacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacttacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474048.1/1-7503 |Norovirus GII isolate JH37 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctaacgccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +aggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacaggattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggctgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggtggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctccggggtaccttgtacctcccagtggaattctatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaccaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaaaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggctattttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtagaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474049.1/1-7503 |Norovirus GII isolate JH38 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccat---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gacctttgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaaaaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgccaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaggatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ctagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggctgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctccggggtaccttgtacctcccagtggaattctatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacgttcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccggcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgc-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtagaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474050.1/1-7503 |Norovirus GII isolate JH40 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacaac +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +actcggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctcctgacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcgaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +aacgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaaaaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgagttctgccggctgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacgctgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggactcatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaaaagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgagcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccggcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgggcttttggaggccttatggatgaactcaaggcgcactgcgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctccggggtaccttgtacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctccgaagtcacggacctgtcccctgacatcattcaggctaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggtccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacaggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtttactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgcccggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474051.1/1-7503 |Norovirus GII isolate JH5 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgcactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaacttaaggcgcactgtgtcacacttcctgttagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccatggcccggcattttatagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +gggtatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcgggtaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggtgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT474052.1/1-7503 |Norovirus GII isolate JH6 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatcgccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgagtatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctagctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcgggtaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgctcccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN567957.1/1-7044 |Norovirus GII isolate 17diapd90078 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------gatg---ggcctctaac-gacgtcaacgttgccgc---tggc------------gacaac +a----ccac-----atggcaatgaaaaaccaacaaaagtgcctacccc------aggcatttttaccaacgt +taaagttggtattaaaaaga-----tcttaggtgatcgcgaaagcgagat---------------------- +---------------------ccaaccccccgcgcccacactgcgggagaagcc-------agagccgcccc +ctc----cccctgagggggcggctgcagaagaacccctgaatgagggttgt---------------gtggcc +taccataaag----------atgg---tgatagaatcgatgggctccccaag---gggcccaccgacac--- +tgaacccaagtgcatggcctacagcgcgcccccccctcatgagagggaggatgggcctgcaatggaaccact +cccaggctctatccttgagatgtgggatggcgagatctaccactacgggctttatgttaatgacggcctggt +tcttggggtccaccgccctgcctctgcaatttgcaccgccaccattgagctgacaccgctctcactttattg +gcgagtggtgcatgtccctc---aaaatgtcatcccctcagaaacgctaaaacgccttgccggggaaaaatt +cccctacacggcgtttgacaacaactgctacgcgttctgttgttgggttttggatctgaacgattcctggct +ttc---ccgtaaaatgataaatcgtaccactggtttttatagaccctaccaggtttggaataggaaacccct +ccccactatggatgatggaaagatgaagaaagtaacgaatgtgttgctttgtgccttgtcctccctcttcac +tcgcccaattaaggatgtaattggcagtttgaaacccctcaacctactcaacttgctggcatcatgtgactg +gacatttggtgggattgttgagaccctggttcttgccggcgagctcttt---ggggtcttttggacgccccc +agatgtctcggccttccttgctcccttgcttggtgattacgagcttcaggggcctcaagacctggccacaga +actcgtgcccatacttatgggcggggttgggatgctactcgggttcactactgagaagatagggcgcatgtt +cacttcagcagcaaacaccctacgatcgtgccgggacatcggagcgtacgggctggacgtcctcaaattgat +catgaaatggttcttccccaaggctgacgaggaaaacgagcttgcaatggttcgatcaatagaagatgctgt +tctagacatggaggcggtggagaacaaccacctcacctccttgcttaaggatagggacagtcttgccacatt +catgaagacacttgacgtggaggaggagaaagcgagacgcctttccaccaagtctgcatctcccgacatagt +aggaaccataaacgcccttcttgcgcgaatttcagcagcgcgttccctagtgcatcgcgcaaaagaggagat +gtccaaccgagtgaaaccagttgtagtcatgatatcaggcaggcctggtattggaaaaacacacatggccag +agacttggcgcggaagatcggcgccacaatgtcgggtgatcaaagagtcggcttggtcccgaggaatggtgt +cgaccattgggacgcctacaagggggagaggatcgttctctgggatgactatggcatgagcaaccccgtgaa +ggatgctctgacactgcaggaattggcagacacctgccccgtgaccctaaactgtgacaggatagagaacaa +gggaaagatgtttgacagtgatgttatcataataacaaccaacctagcaaaccctgcccccctggattatct +caactctgaggcttc-ttctagacgggtggacttcttggtctacgcagagtcacctgacgttgagaaagtga +agaaggagttccccggtcaacccgacatgtggaaagatgcttaccaacaggaccactcgcacatcaagctac +aactggccccccaaggaggttttgacaagaatggcaacaccccttatgggaagggcgtgatgaagacactca +cccagaactccctcgtggcacgcgttgctgcccttgttcacgagagggctgacgagttcgccctccagggtg +acgacttgcccctttacaactttgatgtggacaagataaactccttcaggaagatggctgctgataacaagt +atgggttctttgagacgatgaaggttggggctgccctcaaaagtgtggattcaatagagggccttaagactg +ccttgaagggggtcactctgaaaccttgtaaggtggtctacaaggggacaatctaccagattgagtcgggtc +gt---ggcggtcttgcgattaagaaactagaggaccgctacgcccagagttccgggtccctttttggtgtac +ttactagagtccgccaagcaagagccaagtactaccttaagtgcttccaagaactgatttataccaccctac +agatcgctggggccgcctttgtgacatcgaggatagttaaga------------------gatctagctggt +gcaactcttggcggcaaacaactgagcc--cagcacctcgaatccagtcgaggagccaccc---ccaaca-- +caac--cccagg------tctgggaggttgaccccgttgcggctgaccaagaggggaagaaagggaagaaca +agaagggccgcggtaagaaacatacagccttctccagtaaaggactcagtgatgaagagtatgatgaataca +agaggataagggaggagcgtgagggcaagtactctattgaggagtacctccgtgatcgggatcgttac---t +acgaggagttggccattgcacaagcaacagaggagaacttcgcggaggacgacgagatgagactccgccaga +gaatctttaggcccaccaagaaacagaggagagaagagagagccacccttggcctagtgtctggcactgaaa +tcaggaaaaggaaggccgatgacttccaacccaagggaaagttgtgggctgatgacagtcgggaggtcgact +ataacgaaaccatcaactttgaagccccctcgagtatctggtcacgcgtagtcccttttggcaccggctggg +cattctgggtatccc-cgagcctcttgatcaccaccacccatgtcgtgcccaaggacacaactgagatattt +ggtgtgccgatcgcacagatccaagtccacaaatcgggtgagttttgtcgcctgagattcccccgacccatg +agaactgacgtcagcggtctgatcctggaggagggtgcacccgagggcactgtctgcaccatcctcattaag +aggtccagcggagaactcctaccccttgcggtgaggatgggaacccacgccaccatgaagatccaaggcaga +acaatcggtggccagatgggcatgctccttactggagctaatgcaaagaacatggacctaggcaccagcccc +ggggactgtggttgcccctacatatacaagaggggcaatgactttgtggtggcaggagtgcacacggctgct +gcgaggggtggtaacacggtggtctgtgctacccaaggccctgatggtgaggccacactagagggaggtgag +aaccacggcacctactgtggcgcaccaattttagggccggggaagtctccgaagttaagcacaaaaaccaaa +ttttggaggtcttccacgaccccactcccccctggcacctatgaaccagcctacttgggtggcagggaccca +cgcgtggaaaacggcccatcgttgcagcaagtgatgagggaccaactcaagcccttcactgcccccagagga +aagccgcccaggccctcagtcctggaatccgctaaagaaaccatagtgaattttctagagcaaacccttgaa +cccgccaaaaaatggagttactcacaggcctgtcaatctctggataagaccacctctagcggtgatccccac +catgtgaggaagaatgatcattggaacggtgagacctttacaggccctttggcagaccaagcctcaaaagct +aaccttctctatgaacagggcaaacacgcccagcccgtttacacggccgccctgaaggacgagctcgtcaag +actgaaaagatctatggtacagtgaagaagaggcttctttggggctcggacttgggtacgatgatcagatgt +gcacgggcctttgggggcctaatggaagagatgaaggagaactgcatcctgttgccaatcagggttgggatg +aacatgaatgaagatggaccggctatatttgagaggcacgcgcggcacacctaccatttcgatgccgattat +t-cgcggtgggactccacccaacagagaggcatcctggccgctgcattggacatcatgg-tgaaattctctg +ctgaacctgagtt-agcccaggtggtggcggaagaccttcttgcccccagtgtccttgacgttggcgacttt +cgcatcgccatcgtagagggcctcccctctggagtgccatgcacgtcacagtggaactcttttgctcactgg +ttaatcaccctctgcgctatgtcagaggtgacgggcctctcgcccgatgtgatccaagcccattcctgtttc +tctttctacggtgatgatgagattgtgagcacagacattaccctggaccccagtaaacttacagaaaaattg +aaggaatatggcctaaaaccaactagaccagacaaaaccgaagggcccttagtgatccagaagaacttgtcg +ggcttgacatttctgaggaggacaatagtacgtgatccagctggatggtttggcaagcttgataaagactcc +attctgaggcaactctactggaccagaggaccaaatcatgaggaccctatggaaactatggtgccccactca +caaagagcaatacaactgatggccctgctaggggaagcctcattgcatggctccaacttttatggcaaagtt +agtaggatggtgataagtgagatcaaggaaggtgctctggaagttt---------tacgtgaagccgccttg +gaatgtgccgggttctcagacctcagcacgtgggagggcgatcgcaatctggctcccagtggtgtgaatgaa +gatggcgtctaacgacgcttctccatctac---ggatggatccgccggtctcgtaccagaggtcaacaatga +gaccatggccctagagccagtggtgggcgcccctctcgccgctcccgtcgctggtcaacataatattataga +cccctggattaaaatgaattttgtgcaggcacccaatggagaattcaccgtttcccctcgaaatgccccagg +tgagattttgttagacttagaacttggtcctgatcttaatccttacctttcacatttggcccgcatgtacaa +tggttatgcaggtggcatggaggtgcaagttgtgctggccgggaatgctttcaccgc---tggtaagattat +ttttgctgctgttccgccaaactttccagcagagaatcttagtgcagcacaggtcaccatgtgcccccatgt +gattgttgatgttagacagttggaaccagttatgctccccatgcctgatattcggaacaagttatttcatta +caatcaagttgatgac---ccaaagcttagattattggcctatctttacacaccccttcgggcgaacaatgc +tggggatgatgtttttacagtttcctgccgagttttgactaggccaaccccagattttgagtttatgttttt +ggttcctcccactgttgaatctaagattaagcccttttccttgcccagccttacccttgatgaactttctaa +ttccaga---tttcctgcgcccatagttcagctttatactaacccccatgacaacctggttgtgcagcccca +aaatgggaggtgcaccatagatggtctcctgcagggcactacacaactcgtgtcctgtaatgtttgcagtct +caggg-----------------------------------------g---caccgttggtga---------- +----tggccaacc---ggcaag-cca----------------------------------------tagtga +ggatgagatcatg----------------------------------cccatg--------------gcttt +taatatccagcgcgagatcatgctggagaaccttgatggctcaccctatgacccaactgatgacatcccggc +agtgttgggtgcccctgactttcagggggtcgtgttcggcatcctcagccaga---ggaacgc--------- +--------------------cgacggacaaacc--------agg-----------gcgcacgaggctaaggt +ggacaccagggcggctcgctacgcccctaagcttggctttgttgtggcca------------ctgtggagag +cacagattt---tcatgccaatcaaccctgca---------------------------aattcacccctg- +--------ttgggctgggcggggatgccaatc------------gggacttcaaccagtggcagttgccagc +ctatggcggtgca-ttgaca------aacaacaccaacctcgccccgcctgtgatgcccgtctacccagggg +agcagctccttttcttccgctcccagctgccaagt-tccggtggcgtggttg-------------------- +--ccggatggctggactgcctgctcccccaggagtgggtgcagcactttttccaggaatcggccgcctccca +aagcgatgtggccttggttaggtatgtaaaccccaccacaggtagagtgctctttgaggcgaagctacacaa +acagggtttcctcaccgtggctgcctcaggttcttaccccttggttgttcctgctgatggttattttagatt +tgaatcttgggtgaatcagttttatactttggcccccatgggaaatggcagcgggcgcaga---------cg +agctc---------gttgatggctgggcagttcttgttgggtttggctacagatcttattgggggtggtata +gggtctttaattagtgctgg---tgctaatgcaattaatcaaaaagttgagtatgattttaataagaag--- +------------------------------ttacaatctttttcctttgcccatgataaagagatgttgcag +gcgcaggtcgatgcaactaagcaattgcagcaggatttgattcagctaaagcaagacacccttctttctgcc +ggctatctacccgctgacgcggctaggggctctctcggtgtgcctatgaccaaggccttggattggaatggt +actaggtactgggcccccaattctatgggcacttccagctattca--------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT238663.1/1-7543 |Norovirus GII isolate 118-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +tccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaaggacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgatcaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagatcagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttccctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacagat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactacgttaaatgttttcaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggtaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggcccccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtaagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagctcccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcatatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaacgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaacgaaggcctaccatctggcgtaccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacatgca +caaagacctgtgcagctcatggcactactaggggaatcctccctacatggaccctcattttacagcaaggtt +agcaaactagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgttaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcaggcaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccctcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatataacat-- +----------ctggct-----tttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgcttttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>MT238664.1/1-7548 |Norovirus GII isolate 118-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +tccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaaggacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgatcaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagatcagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttccctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacagat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactacgttaaatgttttcaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggtaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggcccccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtaagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagctcccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcatatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaacgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaacgaaggcctaccatctggcgtaccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacatgca +caaagacctgtgcagctcatggcactactaggggaatcctccctacatggaccctcattttacagcaaggtt +agcaaactagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgttaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcaggcaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccctcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatataacat-- +----------ctggct-----tttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgcttttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MT238665.1/1-7529 |Norovirus GII isolate 147-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcgaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaacggcgt +cgatcattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattttagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaattcaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacacgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggaatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgtttagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcgcccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MT238666.1/1-7501 |Norovirus GII isolate 526-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcataaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +attagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataagaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgaggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctatagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT238667.1/1-7540 |Norovirus GII isolate 782-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>MT238668.1/1-7556 |Norovirus GII isolate 782-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MT238669.1/1-7489 |Norovirus GII isolate 691-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctatcactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcaagcagacagaggcctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgacgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctttttataacttcaacacacgtcataccaaaaggaatcactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattcttatcaag +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtacacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatcctttacaggaaaacttgcggatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacgctccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +cgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcttaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatccaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactgccatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctctgca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgtaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctacacatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaatacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT238670.1/1-7567 |Norovirus GII isolate 259-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------agat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaac----------------- +------------------------------------------------------------------------ +- +>MT238671.1/1-7579 |Norovirus GII isolate 259-2, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaa------------- +------------------------------------------------------------------------ +- +>MT238672.1/1-7568 |Norovirus GII isolate 259-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------agat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaa---------------- +------------------------------------------------------------------------ +- +>MT344180.1/1-7583 |Norovirus GII isolate 782-2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttactcaca-------------atgtacatctggcccccgctgtagc +c----------------------------------------------------------------------- +- +>MT344181.1/1-7562 |Norovirus GII isolate 118-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccatcaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactctcgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccgcagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtagtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagagggggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcgatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaggcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaacatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattattcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatacccaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaa---------------- +------------------------------------------------------------------------ +- +>MT344182.1/1-7568 |Norovirus GII isolate 691-1 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------gat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctatcactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagcggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaagcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcaagcagacagaggcctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggagggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgacgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctttttataacttcaacacacgtcataccaaaaggaatcactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattcttatcaag +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtacacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatcctttacaggaaaacttgcggatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacgctccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +cgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatccaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactgccatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctctgca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgtaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctacacatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaatacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttagaggac-------------gggtgacagcacaa----------- +------------------------------------------------------------------------ +- +>MT367328.1/1-7549 |Norovirus GII isolate 526-3 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------agat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggatat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgttatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcaccggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatgtgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatcttctggcccctagcgtagtagatgtaggagacttt +aaaatcactataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtatggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcacgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648237.1/1-7419 |Norovirus GII isolate 0013 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcagaagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagaactcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcgggtttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacaaaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaatgaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtcttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaacactctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttaagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttctttcatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagttagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------tagaactggagagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648238.1/1-7419 |Norovirus GII isolate 0015 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagaactcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcgggtttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacaaaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtcttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaacactctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcacgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttaagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttctttcatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagttagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------tagaactggagagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648239.1/1-7419 |Norovirus GII isolate 0027 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------ccctcaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaatatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagggtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaagacgccttcaagccggacttttcacacatcaaactac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagtcggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagttcccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtccacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaaaggtgggccctccctgcagcagataatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaactacttccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggggtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atttttaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggagccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggttatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttctttcatta +taatcagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +gaatggtaggtgcacactggatggggagctccaggggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatgtccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgtc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648240.1/1-7419 |Norovirus GII isolate 0029 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgaactcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagaccttgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggttataataattacaacaaaccttgctaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaaactac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtccacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactggacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcactcgacaaaaccacttccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggttctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaacattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgcaggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttctttcatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +gaatggtaggtgcacactggacggggagctccaggggacaacacaacttcaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatgtccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcaatgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgtaataaatcagagggcagaatttgactttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactctatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagacatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648241.1/1-7422 |Norovirus GII isolate 0037 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcaggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccgaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gtctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattccattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcaggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgacgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggcgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgata------------------- +--------ggtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaatgcagg---ggcaaacgccatcaaccaaaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK648242.1/1-7420 |Norovirus GII isolate 0038 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gtctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattccattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgtac +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcaggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgacgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggcgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgata------------------- +--------ggtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaatgcagg---ggcaaacgccatcaaccaaaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN782359.1/1-7517 |Norovirus GII isolate 011617 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcga---agaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaatc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggacggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcgtaccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccgcaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaggccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcat-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccgatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacgccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaaaagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacattgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaaggactcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacctctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagagggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacggtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtggcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +ccaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttcttt +t---------cttt---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MN960578.1/1-7500 |Norovirus GII isolate SCD1042 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacctttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctgacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggaatgt +gctcggagtacacaaaccacccgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +taggcccattaaggacatcattggaaatcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggagtaggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acgtgtcaaacctctggt +cgaagccacccatcgaggaaggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacatcaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +aaagaatcagagaggagaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggagagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctaatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggacctaggcacaacacca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgat +aacaagggtacatattgtggagctcccattttgggacctggcaatgcaccaaaactgagcacaaagacgaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtggaagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaagcttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctgtcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtataggtaccactatgatgctgattac +t-cccgttgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgaaccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttgcttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagagtatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctaaac +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtatcacccagaaactctcctgg +agaaattttattaaacttagagttgggtcctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgctgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagccgaac---agccgcatgagattagtggctatgctctataccccacttaggtctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttatct +agtgccaccttctgttgaatctaaaactaagcctttttccttgcctattttaaccctttctgagcttacaaa +ttcgagg---ttcccagttcccatcgattcgcttttcaccgcccagaataacgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggttagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccaaccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttatattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcagggttggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaatcaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcccccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------cg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcgc +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcc-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MT026582.1/1-7557 |Norovirus GII isolate Hu/US/2019/GII.4[P4]/Aiken0160, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaacattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +acttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +attaggcgtacacaaaccgccagctgccatcagcctcgctaagattgagttggcgccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccggacactctcaagaaattgtccggggagacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtagagtccctgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgatcactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttaccctgaactgtgacaggattgaaaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagacaaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaacacagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaggagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaagaggaaagagtctctctcggtttagtcacgggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgccgcttgagattccctaaaccaatc +aggactgatgtaacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +agatccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaagaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaaaaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgagctagttaaa +actgacaaaatttatggtaagattaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattccctcttt +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacgatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------gtcgta----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaaactccataa +atcaggctatgtcacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgggttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctc--------------------- +taaatctt-----------ccaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaataggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT028542.1/1-7560 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P31]/Allegany0230, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatggc +a------ac----aacgacatcgtaaaatcttcaagtgaca---------------atgtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cctccacgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcatttccggattgcctgatctaaccactgtcagccaacc +ggaagaaaacaatacggcgttcagcgttcccccgctcaatcaaagggagaatagggacgccaaggaaccact +aactggaacaattatagagatgtgggatggagaaatctaccattacggtctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagttaacaccactctctttgttctg +gagacctgtgtatacccctc---agtacctcatctctccagacactcttaggagactacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttctgctgttgggtgttagacctaaacgactcatggct +gag---taggagaatgattcagaggactacagggttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaaactgaaaaaggtagccaacatattcttgtgcaccctatcttcactgttcac +cagacccattaaggacataataggaaaagtgaaacctcttaacatcctcaatatcctggcctcatgtgattg +gactttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggagggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgccgcatccaccttgagggcttgcaaagaccttggtgcatacggtctagaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctggccatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccgccctgctcaaggataaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +gggtacaatcaacgctcttctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggtcgaggcctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgctag +ggagttggccaagaagatcgcagcctccctcgcaggggaccagcgtgtgggtctgatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgttctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaagaacttgctgacacttgccccctcacgctaaattgtgacaggattgaaaacaa +aggaaaagtttttgatagtgacgccataattattaccaccaatctggccaacccagcaccacttgattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggagaaggcaa +aacgcgacttcccaggccagcccgacatgtggaagaacgctttcagttctgacttctcacacataaaactga +cactggctccgcagggtggctttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcattgcccgagcatcaggactactccatgagaggctagatgaatatgaattgcaaggtc +cagctctcactaccttcaactttgatcgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagaattggaaaacagcttaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgttgcgatcaagaagtgccagatagtgtatggtggtagcacctacacgcttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccaccgtgcaaactaacaatgaactagccggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggcattgtattccatcatcc +aaatcgctggggccgcgtttgtcaccacgcgcatcgccaagcgcatga------acatacaaaacctctggt +ccaagccacaggtggaagacacggaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacggccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagatgaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacagcgtaaagaagagagggcctctttaggcttggtcacaggcacagaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaaacagatccaaatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggggagctcatgcctttggcagccaggatgggaacccatgcgaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgcttttgacaggatccaacgccaagaatatggacttgggcacaacacca +ggcgattgcggttgcccctacatctacaaaagagggaacgactatgtggtcataggagtccacacagccgct +gcccgtgggggaaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagtgctccgaaactcagcaccaaaactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcactgcaacaggttatgagggaccagctaaaaccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggtaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaggatgaattggtgaag +actgacaaaatttatggcaaggtcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttggaggcctcatggatgaacttaaggcacactgtgttacccttcctgtcagagttggtatg +aacatgaatgaggatggccccataatctttgagaagcactccaggtataggtatcactatgacgctgactac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaattatgg-ttaagttttctc +cagagccacactt-ggcccagatagttgcagaagacctcctctcccctagtgtaatggatgtgggtgacttc +caaatatcaataagtgagggactcccctccggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctcagaagtcacagacctgtcccctgacatcgtccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaactgacagcaaaactc +aaagagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgaccttcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacagagctca +attctcaggcaaatgtattggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccggtctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcaccatgttcccccatat +agtagtggatgttaggcaattagaccctgtgttgattcccttacccgacgttaggaacaatttctatcacta +caatcaatcaaatgac---cccactattaagttgatagcaatgctttatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgccgggtcctcacgagaccgtcccccgattttgattttatattcct +agtgccacccacagttgagtcaagaactaagcaattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatctcactcaca----------- +-----------tcgcaaa------------------------------------------------ta---- +-------gtcata----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtagggaagatacaaggagtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcgccgattttgctccaaaactgggtagaattcaatttcaaa---------ctgacacaga +tcgtgattt---tgaagctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccatcaaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-gacacc------cccaatgtgcatttggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--atatgaatctggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtagctctgctgagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacgcgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaacctacaacaggcttcctttcaacatgataaagagatgctccag +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgatacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------aacatcggtggcact---------------------------------g +ccaggaa----------------gatctaatcttagggatac------------------------------ +------------------------------tgcccctgtccggggcccctct------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatagcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t----tt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT029316.1/1-7604 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P16]/Helena0207, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccagacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggctaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgaccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcttggcaacgtgtgattg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggtaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaatcgccactttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagtaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaggggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaagcaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaaaggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagctaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactagcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactagcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctttgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaagtggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggtcatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtactgattcccttacccgatgttaggaataatttctatcatta +caatcagttagatgac---tccactattaggttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggagctccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctagtcaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatttggcccctgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcgggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +cagcaagcatccttccaatttagcagcaatttgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcaagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagccggttctggaaccagtgtctcgagcctcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacccttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----tattttct------ttttcttttt-----c-tt-------------ttctt- +-------------tagt---gtctttttatacac-------------atggacgaacccacgagactcgtgg +g---------c------------------------------------------------------------- +- +>MT031761.1/1-7560 |Norovirus GII isolate Hu/US/2017/GII.4 Sydney[P16]/Brevard0199, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaagtcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtattccaccactgagcttgagagaaaacagggaggccaaggaaccgat +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcagcggagaagcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccctaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtggcaaatatattcctgtgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagtaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaagactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccctaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatttacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagaccctcaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccataaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgtgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttatggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggtctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaaccgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtag--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttt-tct----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT031821.1/1-7560 |Norovirus GII isolate Hu/US/2019/GII.4 Sydney[P16]/Davidson0138, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcaaggcccaaacagcct-gccccgagaggcgaaccgcaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +agacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcttggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgaaaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgtcggatcatttacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacccgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagaaagggccacattagggttagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +aggccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacaaggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaactaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcttaccttggtggtcgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggt +aaacctccaagaccaagtgtactggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaagatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaagctg +aaggagtacggcctgaaaccaacccgaccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgcgacccagctggctggtttgggaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaaccatgaagaccccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcctagccaggtcaccatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtctcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttattcacgggccccagcagtgcctttgttgtacaaccgca +aaatggcagatgcacaactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaatagctatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgacgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccctgctgtagcccccaccttcccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaacccagatacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgacttggttatcccccccaatggttactttagatt +tgattcatgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacttgcaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggccaccaaaagactacaacaggaaatgatgaaagttaagcaggcagtgctcttagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggattggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagataacctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactgtctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcaagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacccttcatga---ggggagctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MT032004.1/1-7564 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P16]/Buchanan0126, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatgaaccacaa +aag---------------------ccaccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaagaagaacaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagagaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaagtaaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcacctcagggtggctttgacaaaaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacttttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaggttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagcgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctattcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttactcaccggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgttttggaagcagccaaacaaaccattatcaatgttctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgggttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcaatactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaagccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggctatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaaccgaaggcttaagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctaattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccgca +aaacggcagatgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctagaactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------at +taaatctt-----------ccaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttcttttt------c-tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK928496.1/1-7513 |Norovirus GII isolate CU_21953 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtcttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggtaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tgcaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcgactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttagctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctccgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK928497.1/1-7513 |Norovirus GII isolate CU_21954 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtcttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggtaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tgcaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcgactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttagctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctccgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK928498.1/1-7513 |Norovirus GII isolate CU_21939 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtcttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggtaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tgcaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcgactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttagctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctccgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggagtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK928499.1/1-7513 |Norovirus GII isolate CU_21952 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtcttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgtt +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctgcttaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacagtcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggtaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgataaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tgcaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcgactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttagctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaaattctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaggctaacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctccgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcatcgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatcggcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcgac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggagtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN703761.1/1-7469 |Norovirus GII isolate GII.4_MI_2016_feces nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctctctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggaaaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgtaatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgcgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgaattctgccggctgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgcgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacattcc +caaagacccatgcaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaggaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagc------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN897754.1/1-7576 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P31]/Chippewa0181, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtattttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgctaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcctggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +atccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcagcctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacacggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaaacactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtgggtgacttt +caagtatcaataagtgagggtctcccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgatatcgttcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgtttaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgagccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaactcctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaa--------------- +------------------------------------------------------------------------ +- +>MN897755.1/1-7580 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P16]/Polk0185, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcaaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagccatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +agacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgctggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgtcggatcatttacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaagggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacccgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagaaagggccacattagggttagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcgggcataacagaagcattt +ggagtccccatcaaacagattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +aggccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacaaggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaactaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcttaccttggtggtcgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggt +aaacctccaagaccaagtgtactggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaagatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactagcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaagctg +aaggagtacggcctgaaaccaacccgaccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgcgacccagctggctggtttgggaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtctcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccgca +aaatggcagatgcacaactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccaccttcccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--atatggatttggactgcctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcatgggtcaaccagttctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacttgcaacaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggccaccaaaagactacaacaggaaatgatgaaagttaagcaggcagtgctcttagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagataacctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctgctgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcaagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttc------------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MN897756.1/1-7563 |Norovirus GII isolate Hu/US/2018/GII.4 Sydney[P16]/Shawano0193, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactcttaggaggctcaacggagaggcatt +cccttataccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacaggaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaagacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggctaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaggttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaagaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaaactgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcgtatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgt +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgcggctgtccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcgctcaaggatgagctagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactat +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcacctgacattgtacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaactttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacctgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacgactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgatccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagttgctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacagcaggaaatgatgaaggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgctcccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcgggccgcttctccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttatcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagat-------- +---a-a-aat-tgat-----ta-----t------ttt---------------t-------------ctttt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MH608288.1/1-7488 |Norovirus GII isolate 25747-LVCA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactatccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagtctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ttcgagtagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagatgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaacctttaattttgaccgcaacaaggtcgccgccttcagacaactagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacgacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggtaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctagaagcggcgcttgaaatcatgg-tgagattttctg +ctgagccacaact-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagctgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggtgctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccctacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcattgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacagttgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacattgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcaactgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacttctgca--------- +cc--------------tgtgcatatgtctaacccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH638230.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25744-LVCA/2016/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactatccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagtctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ttcgagtagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagatgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaacctttaattttgaccgcaacaaggtcgccgccttcagacaactagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacgacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggtaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctagaagcggcgcttgaaatcatgg-tgagattttctg +ctgagccacaact-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagctgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggtgctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccctacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacagttgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacattgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcaactgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacttctgca--------- +cc--------------tgtgcatatgtctaacccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK733201.1/1-7468 |Norovirus GII isolate Arg1382 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcacaaccagcacaaacagt +gaaattcac----aacaaagatgagaatccctcatcaaac------------------atatttgccaacat +gactgttggcataaaaaggg----ctctaggggcgagaccaaagcagtccgctcctggagccacatcaagcg +ataagaatgggaaa-----------------------------------------------accaccatccc +ctctatacctc--------------------ccccacccccaaatgg------tgaggacatagtgatcaaa +tacaccaaac----------aagg---ggacacgatcagtggagtgcccatcgtctccactgcagacatatc +tcctctgcacgacactgcgtacagtgtccctcccctggaccaaagggaaaaggtagacgcaaaggagcccct +aactggctcaataattgaaatgtgggacggtgagatttaccattatgggctctatgtggagagagggttggt +cctcggtgtgcacaaaccaccagctgccgtgagcgttgcacgcatcgagttgacccccctttctctgtactg +gagaacagtttacacacccc---cttacttggttgctcctgacactcttaagaagctccatggtgaaacctt +tccctacacagcattcgacaacaactgttactcattctgttgctgggttttggacctgaacgattcttggct +taa---cagaaagttcgtgtcaagaaccacaggcttctacagaccctatcaagattggaacagaaaaccaat +gccaactatggacgaggggaaactcaagaaagtggccaatgtgttcctgtgcggtctgtctgggctgttcac +taggcccattaaagaccttataggtaagcttaaaccactaaacatcctcaacattgtcaccaactgcgactg +gaccttccctggcgttgtggaatcaataatcctccttgcagaactcttt---ggcatcttttggacaccacc +agacatatctgctttcgttgcatccttattaggtgactatgaaatgcaaggtcctgaagatatcgcaaccga +gattgttccagtcatccttggcggcattggtatggtcctcggtttcaccaaagagaaaattggtcggctgct +gagctccgcggcatcatcccttagagcatgcagggagattggcaactatggaatagaagtggtgaaactggt +gatgaaatggttcttcccgaccaagaatgaagttaatgaaatggagatggtcagaacaatagaggatgcagt +gcttgactttgaagcaatagaaaacaaccatatgacagctttgctcaaagacaagaatagtctggccacctt +cctcagagcattagacatggaagaggaaaaggcacgtaaactgtcaaccaagtccgcctcacccgacatagt +cggtaccataaactcacttttggcgagaatcgccgctgccagatccctagtgcacagggctaaggaagagat +gtcatctaggatgcgtcctgttgttatcatgatatctggacgacctgggatagggaagactcacctggcacg +cgatctggccaaaaagatggcagccactctatcgggtgaccaaagagtgggccttgtcccaagaaacggtgt +cgaccactgggatgcatataagggagagaggatcgtcctctgggacgattatggcatgagcaaccccgtggc +agatgccctccggctccaagaactcgccgacacttgccccttaacactcaactgtgatagaatagaaaacaa +agggaaggtctttgacagtgacaccctgatcatcactaccaatttggccaatccagctccccttgactatgt +gaattttgaggcttg-ctcacgtcgcatagacttccttgtctacgcggactccccctcagttgacaaggcaa +agagagactttccaggccagccagacatgtggaaggacgcctttaagccagacttctcacatataaagttac +agttggcaccacaaggaggatttgacaagaatggaaacactccgcacgggaagggcgtcatgaagacactga +ccacacattccctcatagcccgtgccactggcctactccatgagagactggatgaatttgacctacaaggcc +cagagttgccagtgtacaattttgaccaaaacaaggtggctgcgttccgaaaactcgcggccgacaacaagt +atggctttatggacaccttgagagcaggtaacaaattgaaggaagtcaaaaccctagatcaattcaaggaag +cagtgaaggacatacgcataaaaccctgtaggataatttacaattccctggcctatgatttggattcaaatg +ggtcaggaaaagtcaatgtcaaaaaggtaggggaccaaagggtccaggccaacaatgaactcaactccgcac +tcaatagactgcgcggagccagaatcagatactatgtgaagtgctttcaagaaatggtctactcactcctcc +agattgctggtgcggcttttgtcacatcgaggatggcacagaggatga------atatcaacaagctgtggg +caaaaccagg------------aaaaca--------attggagacccccgcagaaccacccacccctcca-- +--------gctgaag---aatggactataacaccaatggatgcagtccaggaaggtaagaaaggcaaaaaca +agagtggcaggggcaagaaacacactgctttctctagtaaaggtctcagcgatgaggagtatgatgagtaca +aaagaattagggaggagcgccaagggaagtactccatagaagaatacctccaggatagggaccggtac---t +atgaagaattggccatagccaaagcaacagaagaaaacttctgtgaagaggaagaagtcaaaataaggcaga +ggattttccgcccaactaagaaacaacgtagggaggagagggccaccttgggtcttgttactggtagtgaga +taagaaagaggaatcctgatgacttcaagccaaaagggaagttgtgggctgatgatgaccgcagtgttaatt +ataatgaaagaatagatttcgaagctccccccagtctctggtccagaatagtcaactttggatcgggctggg +gtttctgggtttcct-ccaatctgtttatcacttccacacatgtcatcccacaaaacatgtccgaagccttt +ggtgtgccaataaaccaaatacagatacacagaagtggggagttctgtaagatgaggttcccaaaagccatc +aggcccgacgtggctggcatgatccttgaggaaggtgcccctgaaggaacagtcgtgaccatattgatcaaa +agaacaactggtgagctcatgccattagcatctcgcatgggcacccatgctactatgaaaatacaaggcaga +atgattggaggtcagatgggaatgctcctcacaggatccaatgccaagaacatggatctcggcaccatccct +ggtgactgtggttgtccttacgtctacaagaggggcaatgactgggttgtcatcggggtgcacactgccgcc +gctaggggcggtaacacggtgatctgtgctacccagggaccagatggtgaggccaccctcgaggggggtgac +aaccatgggacatactgtggtgcgcccatactagggccagggaatgctccaaaactcagcaccaagaccaaa +ttttggagatcctccaacaccccgcttccccctggcacatatgaacctgcctatctcggtggtaaagaccca +agggttaagggcggcccatcactgcagcaggtcatgagggaacagctcaaacccttcactgctccacgtggg +aaaccgccgagaccagcggttctggaggccgcaaaggaaaccatctgtaatgtgttagagcaaaccattgaa +ccaccccagaaatggtcctacgcgcaagcctgcgcatccctggacaaaacaacctcaagtggtcatccccac +cacaagaagaaaaatgacaactggaatggtgaatccttcactggtgttctggccgatcaggcatcaaaggcc +aacctcatgttcgagcaggggaaacacatgcagcctgtgtatacaggagcgctcaaagatgaacttgtcaaa +accagcaaaatttacgagaacatcaagaagaggcttctgtggggctcagacctgggtacgatgatacgctgt +gccagatcatttggtggtctcatggatgaaatgaaggcaaactgcgtaaacctaccagtcagagttggcatg +aacatgaatgaggacgggcccataatctttgagaaacattcaaaatacagatatcattatgatgctgactac +t-ctaggtgggattcaacacaacaaagacatgtcttaggtgctgcacttgaaataatgg-tcaggtactcag +ccgagcccgaatt-ggcacaaattgtggctgaggaccttttgtcgcccagtgtcatggacgttggcgacttc +aaaatcatcataaacgagggtttgccctctggggtcccatgcacatcacaatggaattcaatcgctcattgg +ctgctaacattgtgtgccatgtcagaagtctcagggttgtcaccagatgtggtgcaatcaaactcatgcttc +tccttttatggggacgatgagatagttagcacagacatcaaactggatccccaaaaattaacagacaaactg +agggaatacggcttgatcccaaccagacctgataagacagaaggccccctcataatcagggaaagcttggag +ggtctaaccttcctgagaagggatgtgtgcagagacccagttgggtggtatggcaaacttgaccaatcttca +atcatgagacaactgtattggaccaaaggacccaatcatgaagaccccaacgaaacgatgatcccacactcc +cagagacctgtgcaattgatgtccctacttggtgaagcggccctacacggaccagctttctacaaaaaggtt +agcaaattggtcataactgaactcaaagaaggtggaatggatttttatgtacccaggcaagaacctatgttt +agatggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcactcgagccggtggctggggcttcaatagctgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaggctcccaatggagagttcacggtttcaccccgcaattctcctgg +ggaaatcctactaaatttggaattaggtcccgaactaaatccatacctggcacatctttctagaatgtataa +tggttatgcaggtggagttgaggtgcaagtactattggctgggaacgcgttcacagc---tggaaaattggt +gttcgctgcagtcccccctcattttccattagaaaatataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgcccctcccagacgttaggaatagcttctttcacta +caaccagcaaaatgaa---tcaaggatgagattagtagcaatgctctatactccccttagatctaatggctc +tggtgatgatgtgttcactgtctcctgtagggtgcttactcgaccttctcctgattttgatttcaattattt +ggtcccccctactgttgagtctaaaactaaacccttcacactccctatcttgactataggggagttaaccaa +ttccagg---ttccctgtacctatagatgagctctacaccagtcccaatgagaatttggtggtgcagccaca +gaacgggagatgcgcgctggatggggagttgcatggcacgactcagctccttcccacggcggtttgctcgtt +caggg-----------------------------------------gccggatt---a-------------- +------------accaaaaggt--------------------------------------------ga---- +----gtggagaaa----------------------------------accatgtt----------------- +----------tggaatatgcaggttaccaacatcaacgggaccccttttgatccaacagaggatgtcccggc +ccctttaggcactccagacttttccggcaagctctttggtgtcttaagccaga---gggaccatga------ +-----------------------caatgcctgc--------agg-----------agtcatgatgcagtaat +tgcaactgactctaccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaagt +agatgatgt---gcacatcaaccaacccacta---------------------------aattcaccccag- +--------ttggt------ttatttgaaaatg------------aaggctttaatcaatggacgctccccaa +ctactctggagcc-ttaaca------cttaatatgggactggcccctcctgtggcccctactttccctggtg +aacaacttcttttctttagatcccacatccctc------ttaaaggaggtgt------ggcag--------- +--acccagtcattgactgccttttgcctcaagaatggatccaacatctttaccaagagtcggccccttcaca +aacagacgtggcactaattaggttcacaaatccagacacagggcgtgtcctatttgaagcaaaactgcatag +aaatggttttattacagtggccaatactggtagtagaccgattgtggtgccagctaatggctacttcaggtt +tgactcttgggttaatcagttctactctcttgcccccatgggaactgggaacgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgccggtgacatagtcaccaatggcatc +ggttcactcgtgaatgccgg---ggccaatgcaataaaccaaagagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgttgcaa +gctcaaatccaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacccatgactcaggttttagactggaacggg +accaggcattgggccccaggagccacgaaaaccaccactttctccggtgggttcaccagtgcttcccatacc +ag-----------gactgttgacctgaccaagaaaaca---------------------------------t +c---agc----------------cacaccagcccctatgcctgct--------------------------- +-------------------------------------------------tcc---------------agacc +tagttcta-----------ctgtc------------tctacagtctctactcgctcaaccttg--------- +----------gttagc-------gggtcttc------caacccttcttctctagctaggagttcttttagtg +tttcttctc------aacc--------------------------tacctcct------------------c +ctcctc---------------------------------------ccggaccagtgagtgggtacgcactca +aaacaggacactggagccttacatga---gaggggcgctgcaaacaacctatgtaacgcctccctctagtag +agcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcgt------------ttaacacccgcagacaaccgctattcgctc +acctccgccggaggggggagtcaca--------agcttag--t-----------gaaaagatgatttt---- +tctt-t-ctt-ccct------------------------------------ttga----------aaatttc +t------------gt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK733202.1/1-7314 |Norovirus GII isolate Arg15465 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------caaa-----------------------------------------------accaccatccc +cccaatacctc--------------------ccccaccacctaatgg------ggaggacattgtcgtcacg +tacacaaaac----------aaga---cgacaaaatcagtggagttcccaccgtcttcaccgttgaaaactc +tcccttgcatgacaccgcatacagtgttccacccttggaccaaagggaaaaggttgatgcaaaggagcccct +gacgggttcaatactcgaaatgtgggatggtgagatttaccactatgggctttatgtggaaaggggtctggt +cctcggcgtgcacaagccaccatctgctctgagcatggcacgcattgagttgacccccctttccctctattg +gagggtggtgtataccccgc---cctaccttgttgccccagacaccctcaggaaactccatggggaatcctt +cccctacacagcatttgacaacaactgttacatgttctgctgttgggtcctggatcttaacgattcgtggct +caa---caggaagttcgtgtcaaggactacaggattctacagaccctaccaggactggaacaggaagcccct +gcccaccatggatgaaggcaaactcaagaaggtagccaatgtgctactgtgtggtctatccagcctcttcac +caggcccattaaagacctcataagtaggctgaaaccactaaacattctcaacattgtatctaattgtgattg +gacattccccggtgttgtagaggctcttatcctgcttgcagaactcttt---ggtatcttctggactccacc +agacatatctgctttcgtcgcttccctgttgggagactacgaaatgcagggtcctgaggacattgcaaccga +gatcgtgccagtcgttcttggtggcattggtatggtccttggtttcaccaaggagaagattggccgactact +cagctcggctgcgtcatcactccgggcgtgtagggagattggcaactacgggatagaggtggtcaaattaat +aatgaaatggttcttccccaccaaaaatgaagtgaacgagatggaaatggtcagggcgatagaggatgcagt +gcttgactttgaggcaatagaaaacaatcacatgacagctctactcaaggacaagaataatttggccacctt +tcttagagccctagacatggaggaggagaaggcgcgaaaactgtcaaccaaatccgcatctccagacatagt +cggcaccataaatgccattctagccaggatagctgctgctaggtccctagtccacagagccaaggaagaaat +gtcatccaggatgcgtcctgttgtcatcatgatttcgggccgacctggaatagggaagacacatctagcccg +ggacttagccaagaggatggcgtccacactctcgggagaccagagagtgggccttgtaccaagaaacggcgt +cgaccactgggatgcctacaaaggtgagagaatcgtcctttgggatgattatggcatgagtaaccccgtggc +ggacgccctgcgcctccaggagcttgccgacacctgccctctgacactcaactgtgataggatagagaacaa +ggggaaggtgtttgacagtgacaccataatcataaccaccaacttgtcaaaccccgccccacttgactatgt +gaactttgaggcctg-ttcacgccgcattgacttccttgtttatgcggactctccttcagttgacaaggcaa +agaaagacttccccggccaaccagacatgtggaaagatgcattcaaacctgacttctcgcacataaaattac +aattggcaccgcagggaggattcgacaagaacgggaacaccccacatggcaagggagtgatgaagaccctga +ccacgcactccctcatagccagggccaccggcttgctgcatgaaagattggatgaattcgatttacagggga +cagagctaccaatgtacaactttgaccaaaacaaagtggccgcattcaggaggctagcggccgacaacaagt +acggcctaatggaaaccttaaaggcgggcaacaagttgaaggaggtcaagaccctagaacacttcaaggagg +ctgtcaaggacatccgcataaaaccatgcaggataatctacagttccaccgcttacgaattggagtcaagcg +ggactgggagagtcatcgtcaagaaagtgggtgaccagaaggtgcaggccaataatgaactctactctgccc +tcaacaatctgcgcagagctaggatcaggtactacatcaagtgtttccaggagatgatctacacactcctcc +aaatcgctggtgcggcttttgtaacatcaagaatgacacagaggatga------acattggcagactgtggg +ccaaaccgga------------aaagca--------agtggaaacctctgtagagccccccccccctcct-- +--------attgaag---actggaccataagcccaactgacacagtccaggaaggcaagaagggcaaaaaca +agagcggtagaggcaagaaacataccgccttctctagtaaaggtctcagtgatgaagagtacgacgagtaca +aaaggatcagagaggagcgccaggggaaatactctatagaggagtatctccaggacagagaccggtac---t +atgaagaattggccatagcccaagcaacagaagaaaatttctgtgaggaggaagagatcaaaataagacaaa +ggattttcaggccaaccaggaaacaacgcagagaggagagggccaatctgggcctggtcacagggagtgaaa +ttaggaagaggaaccctgacgacttcaagccaagaggaaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagaaaatagactttgaggcccctcccagtctgtggtccagaatagtcaactttggctcggggtggg +gtttctgggtctcgt-ccaacctgttcatcacatcaacgcatgttgtgccaccaaacatcacggaagctttt +ggggtcccaataagccaaatccaagtccacaggagcggagagttctgcaaaatgaggttccccaaggccatc +aggcctgatgtttctgggatgattcttgaagaaggtgcgccagaggggacggttgtgaccatactgatcaaa +aggacaaccggtgagctcatgccattagcatcccgcatgggcacccatgccaccatgaaaatacagggaaga +atgattggtggccaaatgggaatgctcctcacagggtccaacgccaaaaacatggaccttggcaccattcca +ggggactgtggctgcccctatgtctacaagaggggcaatgagtgggttgtgatcggggtacacaccgctgcg +gccagagggggcaacacggtgatatgtgcaacacaagggcccgaaggtgaggccacacttgaaggaggagac +aaccatggaacctactgtggtgcaccaatcttgggaccaggaaatgcaccaaaactcagcaccaaaaccaag +ttttggagatcctccaatgccccacttccccctggcacgtatgagcctgcctacctcggtgggaaggatcct +agagtcaagggtggcccatcactacagcaagtcatgagagaacaactcaagccattcactgccccgcgcggg +aagccacctaggccggcaatcttggaagctgcaaaggagaccatctgcaacgtgctcgagcaaaccatcgaa +ccacctcaaaaatggtcttacgcgcaagcctgcgcctccctggacaagaccacgtcaagtggctacccccat +cataagaaaaagaatgacaactggaatggtgaatcttttactggtgttttggccgatcaggcatcaaaagca +aacctcatgtttgaacagggaaaacacatgcaacccgtgtacacagctgcactcaaggatgagcttgtaaag +actagtaagatatatgataagatcaagaagaggctcttgtggggctctgacctgggcacgatgattcgctgc +gcaaggtcgtttgggggcctgatggatgagatgaaagctaactgtgtgagattgcctatcagagttgggatg +aacatgaatgaggatggacccataatctttgagaaacattcaagatacaggtaccattatgatgctgactac +t-ccaggtgggactcgacccagcaaaggcacgtgttgggtcttgcacttgaaatcatgg-ttaggttttcag +ccgaacctgaatt-ggcacaaatagtggctgaggaccttttgtcacccagtgtcgtggacgttggtgacttc +aaaattacaataaacgagggattgccctctggtgttccatgcacatcacaatggaactcaattgcccactgg +ctgttaacattgtgtgccatgtcggaggtctcaggactctcgccagatgtggtgcagtcaaattcgtgcttc +tccttctatggagacgacgagatagtcagcacagacataaaattggacccacaaaaactgacagacaagctg +aaagaatatggactgatcccaacccggcccgacaagacagaggggccactcataatcaaagagagcttagaa +ggcctgacatttctaagaagaaacatatgcagggacccggttggatggtatggtcaacttgaccagtcatca +atcatgaggcagttgtattggacaaaaggacccaaccatgaagaccccaacgaaacaatgatcccacactcc +caaagaccagtgcagttaatgtctctccttggtgaagcttccctacacggccctgctttttacaagaaagtt +agcaaattggtcataactgaattgagggaaggggggatggatttctatgtgcccagacaagaaccaatgttc +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtagctggaggagcaatcgctgcccctctaactggacaaacaaatttcattga +tccctggattagaaataattatgtgcaggcacctaatggtgaatttacagtttctcccagaaattcccctgg +tgaaattttgctcaatttggaattgggtcccgagctcaaccctttcttggcccatttgtctaggatgtataa +tggttttgctggcggcattgaggttcaggtcatcatggcgggcaacgccttcaccgc---tggtaagatcat +ctttgcagcagtgcctcccaattttcccacagaaaatcttagccctccacaaatcaccatgtttccccacgt +cataatagatgtgagaaccctcgagcctgtcaacattcccttgcctgatgttagaaacaatttcttccatta +tagccaaaacaatgag---ccccgcatgagattgttagcaatgttgtataccccactcagatcaaatggttc +tgcagaagatgttttcactgtgtcgtgtagggtcctcaccaaaccctcaccagattttgaattcaactactt +ggtccccccaactgtcgagtctaggacaaagcccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgtggccattgatttcctgcacaccagccccactgagaacatcgttgttcagccgca +aaacggcaggtgcacgctggatggtgaactgctgggcaccactcaattggtcacttctaacatctgtgcctt +cagag-----------------------------------------ggtccatctcag-------------- +------------gacacgagaa--------------------------------------------ta---- +----caggagata----------------------------------accaccaa----------------- +----------tggcattttaatatcaccaaccccaatggcactccgtttgaccccacagaggatgtgcctgc +tccacttggaaccccagacttcacaggccagctctatggagtcatttctcaac---ggaacagggaggggac +tcctggt-----gaaaacaaccagaaggccaac--------agg-----------tcccatgagggagtgat +ctcaacactcgcaccaagatttacaccaaagctggggtcggtcatgattggca---------catggaccac +caatgacat---tga---aaaccaaccctcca---------------------------gattcgctccaa- +--------ttggc------ttgaatgatgatg------------acaattataaccagtggcaattgccaaa +ctactccggggca-ctcact------ctcaacatggggttggcctcgtctgttttccctacttaccctggtg +aacagcttcttttcttccgctcatacatcccaa------tgaaggggggata------tggta--------- +--gcccattcatcgactgtcttataccccaagagtgggtctcccatttctatcaagaatcagcaccctcaca +gacagatgtggctctgatcaggtatgtcaaccccgacactggacgcgtcctgttcgaggccaaattgcacag +acaaggatacatcaccgtcgccaagaccggtgacagccccatcaatgtacctgctaatggttatttcagatt +tgattcttgggttaatcagttctactctctcgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggcaggagcttttatagcaggattggctggtgacatgttaacaaacactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcatttgcccatgataaggagatgttacaa +gcacaagttgaggccacaaagaaactgcaggccgaaatgattgccatcaaacaaggggttttaaccgcaggc +ggcttttccccttctgatgcggcccgtggggcaattaacgcccctatgacaaaagtcttagattggaatggg +acaagatactgggcccccaacgccacctctacaacctctatgtcaggtggcttcacgggt------------ +ca-----------aaccgtgcacaggcccacaccaaat---------------------------------t +tcaaaac----------------aaaccaggcacccaaatctata--------------------------- +-------------------------------------------------ccc---------------agtag +tggatcct-----------cagta------------aggtcaaacacgacccaactttctagt--------- +----------ctgagt-------tcacattc------ctctgggtcttcccgatccagcgggtccacaactg +tcagctccc------tac--------------------------------cat------------------c +atccag---------------------------------------taggactagggactgggttaatcagca +aaatctcaatttggaaccacatatgc---ctggatccctcagaacagcttttgtcactccaccatctagcag +ggcctcc---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcggagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattagt------ +-tta-a-att-tgat------------------------------------ttaa-tt------tggat--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK733203.1/1-7302 |Norovirus GII isolate Arg15482 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------------------accatccc +cccaatacctc--------------------ccccaccacctaatgg------ggaggacattgtcgtcacg +tacacaaaac----------aaga---cgacaaaatcagtggagttcccaccgtctccaccgttgaaaactc +tcccttgcatgacaccgcatacagtgttccacccttggaccaaagggaaaaagttgatgcaaaggagcccct +gacgggttcaatactcgaaatgtgggatggtgagatttaccactatgggctttatgtggaaaggggtctggt +cctcggcgtgcacaagccaccatctgctctgagcatggcacgcattgagttaacccccctttccctctattg +gagggtggtgtataccccgc---cctaccttgttgccccagacaccctcaggaaactccatggggaatcctt +cccctacacagcatttgacaataactgttacatgttctgctgttgggtcctggatcttaacgattcgtggct +caa---caggaagttcgtgtcaaggactacaggattctacagaccctaccaggactggaacaggaagcccct +gcccaccatggatgaaggcaaactcaagaaggtagccaatgtgttactgtgtggtctatccagcctcttcac +caggcccattaaagacctcataagtaggctgaaaccactaaacattctcaacattgtatccaattgtgattg +gacattccccggtgttgtagaggcccttatcctgcttgtagaactcttt---ggtatcttctggactccacc +agacatatctgctttcgtcgcttccctgttgggagactacgaaatgcagggtcctgaggacattgcaaccga +gatcgtgccagtcgtccttggtggcattggtatggtccttggtttcaccaaggagaagattggccgactact +cagctcggctgcgtcatcactccgggcgtgtagggagattggcaactacgggatagaggtggtcaaattaat +aatgaaatggttcttccccaccaaaaatgaagtgaacgagatggaaatggtcagggcgatagaggatgcagt +gcttgactttgaggcaatagaaaacaatcacatgacagctctactcaaggacaagaatagtttggccacctt +tcttagagccctagacatggaggaggagaaggcgcgaaaactgtcaaccaaatccgcatctccagacatagt +cggcaccataaatgccattctagccaggatagctgctgctaggtccctagtccacagagccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatttcgggccgacctggaatagggaagacacatctagcccg +ggacttagccaagaggatggcgtccacactctcgggagaccagagagtgggccttgtaccaagaaacggcgt +cgaccactgggatgcctacaaaggtgagagaatcgtcctttgggatgattatggcatgagtaaccccgtggc +ggacgccctgcgcctccaggagcttgccgacacctgccctctgacactcaactgtgataggatagagaacaa +ggggaaggtgtttgacagtgacaccataattataaccaccaacttgtcaaaccccgccccacttgactatgt +gaactttgaggcctg-ttcacgccgcattgacttccttgtttatgcggactctccttcagttgacaaggcaa +agaaagacttccccggccaaccagacatgtggaaagatgcattcaaacctgacttctcgcacataaaattac +aattggcaccgcagggaggattcgacaagaacgggaacaccccacatggcaagggagtgatgaagaccctga +ccacgcattccctcatagccagggccaccggcttgctgcatgaaagattggatgaattcgatttacagggga +cagagctaccaatgtacaactttgaccaaaacaaagtggccgcattcaggaggctagcggccgacaacaagt +acggcctaatggaaaccttaaaggcgggcaacaagttgaaggaggtcaagaccctagaacacttcaaggagg +ctgtcaaggacatccgcataaaaccatgcaggataatctacaattccaccgcttacgaattggagtcaagcg +ggactgggagagtcatcgtcaagaaaatgggtgaccagaaggtgcaggccaataatgaactctactctgccc +tcaacaatctgcgcagagctaggatcaggtactacatcaagtgtttccaggagatgatctacacactcctcc +aaatcgctggtgcggcttttgtaacatcaagaatgacacagaggatga------acattggcagactgtggg +ccaaaccgga------------aaagca--------agtggaaacctctgtagagccccccccccctcct-- +--------attgaag---actggaccataagcccaactgacacagtccaggaaggcaagaagggcaaaaaca +agagcggtagaggcaagaagcatactgccttctctagtaaaggtctcagtgatgaagagtacgacgagtaca +aaaggatcagagaggagcgccaggggaaatactctatagaggagtatctccaggacagagaccggtac---t +atgaagaattggccatagcccaagcaacagaagaaaatttctgtgaggaggaagagatcaaaataagacaaa +ggattttcaggccaaccaggaaacaacgcagagaagagagggccaatctgggcctggtcacagggagtgaaa +ttaggaagaggaaccctgacgacttcaagccaagaggaaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagaaaatagactttgaggcccctcccagtctgtggtccagaatagtcaactttggctcggggtggg +gtttctgggtctcgt-ccaacctgttcatcacatcaacgcatgttgtgccaccaaacatcacggaagctttt +ggggtctcaataagccaaatccaagtccacaggagcggagagttctgcaaaatgaggttccccaaggccatc +aggcctgatgtttctgggatgattcttgaagaaggtgcgccagaggggacggttgtaaccatactgatcaaa +aggacaaccggtgagctcatgccattagcatcccgcatgggcacccatgccaccatgaaaatacagggaaga +atgattggtggccaaatgggaatgctcctcacagggtccaacgccaaaaacatggaccttggcaccatccca +ggggactgtggctgcccctatgtctacaagaggggcaatgagtgggttgtgatcggggtacacaccgctgcg +gccagagggggcaacacggtgatatgtgcaacacaagggcccgaaggtgaggccacacttgaaggaggagac +aaccatggaacctactgtggtgcaccaatcttgggaccaggaaatgcaccaaaactcagcaccaaaaccaaa +ttttggagatcctccaatgccccacttccccctggcacgtatgagcctgcctacctcggtgggaaggatcct +agagtcaagggtggcccatcactacagcaagtcatgagagaacaactcaagccattcactgccccgcgcggg +aagccacctaggccggcaatcttggaagctgcaaaggagactatctgcaacgtgctcgagcaaaccatcgaa +ccacctcaaaaatggtcttacgcgcaagcctgcgcctccctggacaagaccacgtcaagtggctacccccat +cataagaaaaagaatgacaactggaatggtgaatcttttactggtgttttggccgatcaggcatcaaaagca +aacctcatgtttgaacagggaaaacacatgcaacccgtgtacacagctgcactcaaggatgagcttgtaaag +actagtaagatatatgataagatcaagaagaggctcttgtggggctctgacctgggcacgatgattcgctgc +gcaaggtcgtttgggggcctgatggatgagatgaaagctaactgtgtgagattgcctatcagagttgggatg +aacatgaatgaggatggacccataatctttgagaaacattcaagatacaggtaccattatgatgctgactac +t-ccaggtgggactcgacccagcaaaggcacgtgttgggtcttgcacttgaaatcatgg-ttaggttttcag +ccgaacctgaatt-ggcacaaatagtggctgaggaccttttgtcacccagtgtcgtggacgttggtgacttc +aaaattacaataaacgagggattgccctctggtgttccatgcacatcacaatggaactcaattgcccactgg +ctgttaacattgtgtgccatgtcggaggtctcaggactctcgccagatgtggtgcagtcaaattcgtgcttc +tccttctatggagacgacgagatagtcagcacagacataaaattggacccacaaaaactgacagacaagctg +aaagaatatggactgatcccaacccggcccgacaagacagaggggccactcataatcaaagagagcttagaa +ggcctgacatttctaagaagaaacatatgcagggacccggttggatggtatggccaacttgaccagtcatca +atcatgaggcagttgtattggacaaaaggacccaaccatgaagaccccaacgaaacaatgatcccacactcc +caaagaccagtgcagttaatgtctctccttggtgaagcttccctacacggccctgctttttacaagaaagtt +agcaaattggtcatcactgaattgagggaaggggggatggatttctatgtgcccagacaagaaccaatgttc +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtagctggaggagcaatcgctgcccctctaactggacaaacaaattttattga +tccctggattagaaataattatgtgcaggcacctaatggtgaatttacagtttctcccagaaattcccctgg +tgaaattttgctcaacttggaattgggtcccgagctcaaccctttcttggcccatttgtctaggatgtataa +tggttttgctggcggcattgaggttcaggtcatcatggcgggcaacgccttcaccgc---tggtaagatcat +ctttgcagcagtgcctcccaattttcccacagaaaatcttagccctccacaaatcaccatgtttccccacgt +cataatagatgtgagaaccctcgagcctgtcaacattcccttgcctgatgttagaaacaatttcttccatta +taaccaaaataatgag---ccccgcatgagattgttagcaatgttgtataccccactcagatcaaatggttc +tgcagaagatgttttcactgtgtcgtgtagggtcctcaccaaaccctcaccagattttgaattcaactactt +ggtccccccaactgtcgagtctaggacaaagcccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgtggccattgatttcctgcacaccagccccactgagaacatcgttgttcagccgca +aaacggcaggtgcacgctggatggtgaactgcagggcaccactcaattggtcacttctaacatctgtgcctt +cagag-----------------------------------------ggtccatctcag-------------- +------------gacatgagaa--------------------------------------------ta---- +----caggagata----------------------------------accaccaa----------------- +----------tggcattttaatgtcaccaaccccaatggcactccgtttgaccccacagaggatgtgcctgc +tccacttggaaccccagatttcacaggccagctctatggagtcatttctcaac---ggaacagggaggggaa +tcctggt-----gataacaaccagaaggccaac--------agg-----------tcccatgagggagtgat +ctcaacactcgcaccaagatttacaccaaagctggggtcggtcatgattggca---------catggaccac +caatgacat---tga---aaaccaaccctcca---------------------------gattcgctccaa- +--------ttggc------ttaaatgatgatg------------acaattataaccagtggcaattgccaaa +ctactccggggca-ctcact------ctcaacatggggttggcctcgtctgttttccctacttaccctggtg +aacagcttcttttcttccgctcatatatcccaa------tgaaggggggata------tggta--------- +--gcccattcatcgactgccttataccccaagagtgggtctcccatttctatcaagaatcagcaccctcaca +gacagatgtggctctgatcaggtatgtcaaccccgacacaggacgcgtcctgttcgaggccaaattgcacag +acaaggatacatcaccgtcgccaagaccggtgacagccccatcaatgtacctgctaatggttatttcagatt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggcaggagcttttatagcaggattggctggtgatatgttaacaaacactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcatttgcccatgataaggagatgttacaa +gcacaagttgaggccacaaagaaactgcaggccgaaatgattgccatcaaacaaggggttttgaccgcaggc +ggcttttccccttctgatgcggcccgtggggcaattaacgcccctatgacaaaagtcttagattggaatggg +acaagatactgggcccccaacgccacctctacaacctctatgtcaggtggcttcacgggt------------ +ca-----------aaccgtgcacaggcccacaccaaat---------------------------------t +tcaaaac----------------aaaccaggcacccaaatctata--------------------------- +-------------------------------------------------ccc---------------agtag +tggatcct-----------cagta------------aggtcaaacacgacccaactttctagt--------- +----------ctgagt-------tcacattc------ctctgggtcttcccgatccagcgggtccacaactg +tcagctccc------tac--------------------------------cat------------------c +atccag---------------------------------------taggactagggactgggttaatcagca +aaatctcaatttggaaccacatatgc---ctggatccctcagaacagcttttgtcactccaccatctagcag +ggcctcc---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcggagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattagt------ +-tta-a-att-tgat------------------------------------ttaa-tt-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK733204.1/1-7314 |Norovirus GII isolate Arg15559 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------------------caccatccc +cccaatacctc--------------------ccccaccacctaatgg------ggaggacattgtcgtcacg +tacacaaaac----------aaga---cgacaaaatcagtggagttcccaccgtctccaccgttgaaaactc +tcccttgcatgacaccgcatacagtgttccacccttggaccaaagggaaaaggttgatgcaagggagcccct +gacgggttcaatactcgaaatgtgggatggtgagatttaccactatgggctttatgtggaaaggggtctggt +cctcggcgtgcacaagccaccatctgctctgagcatggcacgcattgagttgacccccctttccctctattg +gagggtggtgtataccccgc---cctaccttgttgccccagacaccctcaggaaactccatggggaatcctt +cccctacacagcatttgacaataactgttacatgttctgctgttgggtcctggatcttaacgattcgtggct +caa---caggaagttcgtgtcaaggactacaggattctacagaccctaccaggactggaacaggaagcccct +gcccaccatggatgaaggcaaacttaagaaggtagccaatgtgctactgtgtggtctatccagcttcttcac +caggcccattaaagacctcataagtaggctgaaaccactaaacattctcaacattgtatccaattgtgattg +gacattccccggtgttgtagaggctcttatcctgcttgcagaactcttt---ggtatcttctggactccacc +agacatatctgctttcgtcgcttccctgttgggagactacgaaatgcagggtcctgaggacattgcaaccga +gatcgtgccagtcgtccttggtggcattggtatggtccttggtttcaccaaggagaagattggccgactact +cagctcggccgcgtcatcactccgggcgtgtagggagattggcaactacgggatagaggtggtcaaattaat +aatgaaatggttcttccccaccaaaaatgaagtgaacgagatggaaatggtcagggcgatagaggatgcagt +gcttgactttgaggcaatagaaaacaatcacatgacagctctactcaaggacaagaatagtttggccacctt +tcttagagccctagacatggaggaggagaaggcgcgaaaactgtcaaccaaatccgcatctccagacatagt +cggcaccataaatgccattctagccaggatagctgctgctaggtccctagtccacagagccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatttcgggccgacctggaatagggaagacacatctagcccg +ggacttagccaagaggatggcgtccacactctcgggagaccagagagtgggccttgtaccaagaaacggcgt +cgaccactgggatgcctacaaaggtgagagaatcgtcctttgggatgattatggcatgagtaaccccgtggc +ggacgccctgcgcctccaggagcttgccgacacctgccctctaacgctcaactgtgataggatagagaacaa +ggggaaggtgtttgacagtgacaccataatcataaccaccaacttgtcaaaccccgccccacttgactatgt +gaactttgaggcctg-ttcacgccgcattgacttccttgtttatgcggactctccttcagttgacaaggcaa +agaaagacttccccggccaaccagacatgtggaaagatgcattcaaacctgacttctcgcacataaaattac +aattggcaccgcagggaggattcgacaagaacgggaacaccccacatggcaagggagtgatgaagaccctga +ccacgcactccctcatagccagggccaccggcttgctgcatgaaagattggatgaattcgatttacagggga +cagagctaccaatgtacaactttgaccaaaacaaagtggccgcattcaggaggctagcggccgacaacaagt +acggcctaatggaaaccttaaaggcgggcaacaagttgaaggaggtcaagaccctagaacacttcaaggagg +ctgtcaaggacatccgcataaaaccatgcaggataatctacaattccaccgcttacgaattggagtcaagcg +ggactgggagagtcatcgtcaagaaagtgggtgaccagaaggtgcaagccaataatgaactctactctgccc +tcaacaatctgcgcagagctaggatcaggtactacatcaagtgtttccaggagatgatctacacactcctcc +aaatcgctggtgcggcttttgtaacatcaagaatgacacagaggatga------acattggcagactgtggg +ccaaaccgga------------aaagca--------agtggaagcctctgtagagccccccccccctcct-- +--------attgaag---actggaccataagcccaactgacacagtccaggaaggcaagaagggcaaaaaca +agagcggtagaggcaagaaacataccgccttctctagtaaaggtctcagtgatgaagagtacgacgagtaca +aaaggatcagagaggagcgccaggggaaatactctatagaggagtatctccaggacagagaccggtac---t +atgaagaattggccatagcccaagcaacagaagaaaatttctgtgaggaggaagagatcaaaataagacaaa +ggattttcaggccaaccaggaaacaacgcagagaagagagggccaatctgggcctggtcacagggagtgaaa +ttaggaagaggaaccctgacgacttcaagccaagaggaaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagaaaatagactttgaggcccctcccagtctgtggtccagaatagtcaactttggctcggggtggg +gtttctgggtctcgt-ccaacctgttcatcacatcaacgcatgttgtgccaccaaacatcacggaagctttt +ggggtcccaataagccaaatccaagtccacaggagcggagagttctgcaaaatgaggttccccaaggccatc +aggcctgatgtttctgggatgattcttgaagaaggtgcgccagaggggacggttgtgaccatactgatcaaa +aggacaaccggtgagctcatgccattagcatcccgtatgggcacccatgccaccatgaaaatacagggaaga +atgattggtggccaaatgggaatgctcctcacagggtccaacgccaaaaacatggatcttggcaccatccca +ggggactgtggctgcccctatgtctacaagaggggcaatgagtgggttgtgatcggggtacacaccgctgcg +gccagagggggcaacacggtgatatgtgcaacacaagggcccgaaggtgaggccacacttgaaggaggagac +aaccatggaacctactgtggtgcaccaatcttgggaccaggaaatgcaccaaaactcagcaccaaaaccaaa +ttttggagatcctccaatgccccacttccccctggcacgtatgagcctgcctacctcggtgggaaggatcct +agagtcaagggtggcccatcactacagcaagtcatgagagaacaactcaagccattcactgccccgcgcggg +aagccacctaggccggcaatcttggaagctgcaaaggagaccatctgcaacgtgctcgagcaaaccatcgaa +ccacctcaaaaatggtcttacgcgcaagcctgcgcttccctggacaagaccacgtcaagtggctacccccat +cataagaaaaagaatgacaactggaatggtgaatcttttactggtgttttggccgatcaggcatcaaaagca +aacctcatgtttgaacagggaaaacacatgcaacccgtgtacacagctgcactcaaggatgagcttgtaaag +accagtaagatatatgataagatcaagaagaggctcttgtggggctctgacctgggcacgatgattcgttgc +gcaaggtcgtttgggggcctgatggatgagatgaaagctaactgtgtgagattgcctatcagagttgggatg +aacatgaatgaggatggacccataatctttgagaaacattcaagatacagttaccattatgatgctgactac +t-ccaggtgggactcgacccagcaaaggcacgtgttgggtcttgcacttgaaatcatgg-ttaggttttcag +ccgaacctgaatt-ggcacaaatagtggctgaggaccttttgtcacccagtgtcgtggacgttggtgacttc +aaaattacaataaacgagggattgccctctggtgttccatgcacatcacaatggaactcaatcgcccactgg +ctgttaacattgtgtgccatgtcggaggtctcaggactctcgccagatgtggtgcagtcaaattcgtgcttc +tccttctatggagacgacgagatagtcagcacagacataaaattggacccacaaaaactgacagacaagctg +aaagaatatggactgatcccaacccgacccgacaagacagaggggccactcataatcaaagagagcttagaa +ggcctgacatttctaagaagaaacatatgcagggacccggttggatggtatggtcaacttgaccagtcatca +atcatgaggcagttgtattggacaaaaggacccaaccatgatgaccccaacgaaacgatgatcccacactca +caaagaccagtgcagttaatgtctctccttggtgaagcttccctacacggccctgctttttacaagaaagtt +agcaaattggtcatcactgaattgagggaaggggggatggatttctatgtgcccagacaagaaccaatgttc +agatggatgagattctctgacttgagcacgtgggagggtgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtagctggaggagcaatcgctgcccctctaactggacaaacaaatttcattga +tccctggattagaaataattatgtgcaggcacctaatggtgaatttacagtttctcccagaaattcccctgg +tgaaattttgctcaacttggaattgggtcccgagctcaaccctttcttggcccatttgtctaggatgtataa +tggttttgctggcggcattgaggttcaggtcatcatggcgggcaacgccttcaccgc---tggtaagatcat +ctttgcagcagtgcctcccaattttcccacagaaaatcttagccctccacaaatcaccatgtttccccacgt +cataatagatgtgagaaccctcgagcctgtcaacattcccttgcctgatgttagaaataatttcttccatta +tagccaaaataatgag---ccccgcatgagattgttagcaatgttgtataccccactcagatcaaatggttc +tgcagaagatgttttcactgtgtcgtgtagggtcctcaccaaaccctcaccagattttgaattcaactactt +ggtccccccaactgtcgagtctaggacaaagcccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgtggccattgatttcctgcacaccagccccactgagaacatcgttgttcagccgca +aaacggcaggtgcacgctggatggtgaactgcagggcaccactcaattggtcacttctaacatctgtgcctt +cagag-----------------------------------------ggtccatctcag-------------- +------------gacatgagaa--------------------------------------------tg---- +----caggagata----------------------------------accaccaa----------------- +----------tggcattttaatatcaccaaccccaatggcactccgtttgaccccacagaggatgtgcctgc +tccacttggaaccccagatttcacaggccagctctatggagtcatttctcaac---ggaacagggaggggac +tcctggt-----gaaaacaaccagaaggccaac--------agg-----------tcccatgagggagtgat +ctcaacactcgcaccaagatttacaccaaagctggggtcggtcatgattggca---------catggaccac +caatgacat---tga---aaaccaaccctcca---------------------------gattcgctccaa- +--------ttggc------ttaaatgatgatg------------acaattacaaccagtggcaattgccaaa +ctactccggggca-ctcact------ctcaacatggggttggcctcgtctgttttccctacttaccctggtg +aacagcttcttttcttccgctcatacatcccaa------tgaaggggggata------tggca--------- +--gcccattcatcgactgccttataccccaagagtgggtctcccatttctatcaagaatcagcaccctcaca +gacagatgtggctctgatcaggtatgtcaaccccgacacaggacgcgtcctgttcgaggccaaattgcacag +acaaggatacatcaccgtcgccaagaccggtgacagccccatcaatgtacctgctaatggttatttcagatt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggcaggagcttttatagcaggattggctggtgacatgttaacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcattttcccatgataaggagatgttacaa +gcacaagttgaggccacaagaaaactgcaggccgaaatgattgccatcaaacaaggggttttgaccgcaggc +ggcttttccccttctgatgcggcccgtggggcaattaacgcccctatgacaaaagtcttagattggaatggg +acaagatactgggcccccaacgccacctctacaacctctatgtcaggtggcttcacgggt------------ +ca-----------aaccgtgcacaggcccacaccaaat---------------------------------t +tcaaaac----------------aaaccaggcgcccaaatctata--------------------------- +-------------------------------------------------ccc---------------agtag +tggatcct-----------cagta------------aggtcaaacacgacccaactttctagt--------- +----------ctgagt-------tcacattc------ctctgggtcttcccgatccagcgggtccacaactg +tcagctccc------tac--------------------------------cat------------------c +atccag---------------------------------------taggactagggactgggttgatcagca +aaatctcaatttggaaccacatatgc---ctggatccctcagaacagcttttgtcactccaccatctagcag +ggcctcc---agtc------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacacgcagacagccgctgtttgcac +accttcggagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattagt------ +-tta-a-att-tgat------------------------------------ttaa-tt------tggattta +a------------ag--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK733206.1/1-7444 |Norovirus GII isolate PNV024019 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaaaaccagctcaaacagt +gaaattcac----aacgatgacgccacaccagcgtcaaac------------------atcttcgccaacat +gactgttggcttgaagaaag----ccttgggggcacggcctaaacagcctacccccagggccccttctcctc +ctaaggagaagaag-----------------------------------------------agaaccctccc +tccaataccac--------------------ccccaccacccaatgg------tgaggatattgtcatcaag +tacaccaaac----------aggg---tgaccttgtggagggggtccccgcggtttccaccgtggagatccc +ccctacactggacaccgcatatagtgtcccccccttagaccagagggagaagcttgatgccaaagagccgct +aacaggctcaataattgaaatgtgggatggagagatttaccattatgggctttatgtggagcgaggcttgat +tctcggcgtgcacaagccacctgcagcaattagcttcgcccgcattgagttgacccctctctctctttattg +gagagctgtctacacaccac---cctacctagtggacccacaaaacctgaagaaactccatggcgagtcctt +cccttacaccgcatttgacaacaactgctactccttctgctgttgggttttggacttgaatgattcatggtt +caa---cagaaaacatgtgtcaaggactacggggttttacagaccctatcaggagtggaatagaaaaccaat +gcccaccatggatgaaggaaaacttaagaaagtggccaatgtgttcttgtgtgccatctctggccttttcac +caggccaatcaaggacatcatagggaaactgaaaccattgaacatcctcaacatagtgtcaaactgtgattg +gacattccctggtgtcgtggaatccctcatattgcttgctgaattattt---ggggtcttctggacaccgcc +agacatctccgctttcgtggcatccctcttgggtgattacgaaatgcaggggcctgaagatatagccactga +gatcgtgccagtcatcctcggtggcattggaatggtcctcggcttcacaagggaaaagatagggcgtatact +gagttctgccgcctcatcactcagagcatgcagggagattggcaactacggtatagaggtggtgaagctcgt +gatgaagtggttcttcccttccaagaacgaggcgagcgagatggacatggtcagagcaatagaggatgcagt +gcttgatttcgaagccattgaaaacaaccacatgacatctctgctaaaagacaagaacagcctcgcgacctt +cctcagggcactggacatggaagaagagaaggcacggaaactgtctaccaaatctgcctctccagacattgt +tggaaccataaatgcactcctagccagaattgcagctgccagatccctcgtccaccgcgccaaagaagagat +gtcatccaggatgcgtcctgttgtcatcatgatctctgggcggccagggatagggaaaacacacttggcacg +cgacctggctaagaagatggcagcaaccctcgctggtgatcaaagggttggccttgtcccgagaaatggtgt +tgaccactgggatgcatacaagggagagaggatagttctgtgggatgactacggcatgagcaacccaatatc +agatgcactaagactccaagaacttgctgacacctgtcctctaacactcaactgtgacagaatagagaacaa +ggggaaagtatttgacagtgacaccataatcatcaccaccaatctggccaaccctgcccctcttgactatgt +caatttcgaggcatg-ctctcgccgcattgacttcctcgtctatgcggactcccccgctgttgacaaggcaa +agagagacttcccggggcaacctgatatgtggaaagatgcattcaagcaggacttctcacacataaaactac +aattggcaccacaaggaggctttgacaaaaatggcaacaccccacacggcaagggcgtgatgaaatccctaa +ccacacattctctcatcgcccgcgccacggggctcctacatgagaggctggatgaatttgatctacaggggc +ctgaactcccagtctataactttgaccagaacaaagtggcgtcgttcaggcgactcgccgccgacaacaagt +atggccttatggaaaccatcaaagctggcaataaactaaaagaggtcaagacactggaacagttcaaggagg +ctgtgaaaaacatacggataaacccctgcagaataatctacaactccatagcttatgacttggactcgaatg +gagcaggcaaagtcaacgtcaagaaggtgggcgacaccaagatccagacgagcaatgagctcatctccgcac +tcaccaacttacgcggcgccagaattagatactatgtgaagtgcttccaagaaatgatctactcacttctac +agatcgctggcgcagcgtttgtgacgacgcggatggccaaaagaataa------acatcaacaagatctggt +ccaagcctga------------ggaaaa--------gccgattgtcagcccaggacccccagcgcctcca-- +--------gaagaac---actggaccatcgccccaagcgacacgattcaggagggcaagaagggcaagaaca +agagtggcagaggcaagaaacacactgctttctccagtaagggtctcagtgatgaggagtatgatgaataca +agagaatcagggaggagagacaaggaaaatactctattgaagaatacctccaagacagagaccgatac---t +atgaggaattggcaatagcaaaagcaactgaagaggatttctgtgaggaggaggaggtcaaaatcaggcaga +ggatctttcgtcctaccagaaaacagcgcaaggaggaaagggccaccctagggttagtgacaggcagtgaaa +ttaggaagaggaacccagatgatttcagaccgagagggaagttgtgggctgacgatgatcgtagtgtcaact +ataatgagaagatagacttcgaggcccctcctagcctgtggtcaagaatagtcaactttggatcaggctggg +gtttctgggtgtcat-ctaacctatttataacctccacacacgtgatccccccaaacatatcagaagcattt +ggtgtcccaatcaatcagatacaggttcacaggtgtggcgagttctgcaagatgaggtttcccaaggccatc +aggcctgatgtctctggcatgattctggaggaaggggcccccgaagggacagtggtgaccatacttataaaa +aggacaactggagagctcatgccattggcagctcgcatgggcacacacgccaccatgaagattcaagggaga +atgattggaggtcaaatgggtatgctccttacaggttccaatgctaagaacatggaccttggcaccgtcccg +ggtgattgtggatgcccgtatgtttacaagagaggaaatgattgggttgtgatcggagtccacactgccgcc +gccagaggaggcaacacagtaatctgtgccacccagggtccagatggggaggctacactggaagggggtgat +aaccatggcacctactgtggggcgccaatactgggacccggtagcgctccaaaactcagcaccaagacaaaa +ttctggcggtcctccaatgcaccactcccccctggcacgtacgagcctgcctaccttggtgggaaagatccc +agggtcaaagggggcccatccctgcaacaagtcatgagagaacaactgaaacccttcaccgccccacgcggc +aagccacccaagcccgcagtcctggaggcggccaaggagaccatatgtggtgtgcttgaacagaccattgac +ccaccccaacagtggtcctacgcgcaggcctgctcctcactagacaaaacaacatcaagtggccacccccat +cacaagaagaagaatgacaattggaatggagaatcattcactggcgtgctagccgatcaggcttccagagcg +aacctcatgtatgagcaggggaaacacatgcagcccgtgtacacagcagcacttaaggatgagttggtaaag +accagcaagatatatgacaaagtcaaaaagaggctcttgtggggatcagacttgggaaccatgattcggtgt +gcaagatcttttggtgggcttatggatgaaatgaaggcaaactgtgtaaatctaccaataagagtgggtatg +aacatgaatgaggatggccccataatctttgagaggcactccaagtacaaatatcattatgatgctgactac +t-ccaggtgggactcaacacaacaaaggcatgtccttggggttgctcttgagatcatgg-ttagattttcag +cagaacctgagtt-ggcacagatagtggctgaggatctcctgtcgcccagtgtcgtagacgtgggtgacttc +aaagtcacaataaatgagggcctcccatctggagtcccatgcacgtcacagtggaactcaataacccattgg +ctgctgaccctgtgcgcaatgtcagaagtatctggattgtcaccagacgttgtgcaagcaaattcatgcttc +tcattctacggggatgatgagatagtcagcacagacattaaattggatgccttcaaattaacagaaaaactc +aaagagtatgggctgatcccaaccaggccagacaagacagaaggaccactagtgataaaagagaaactagag +gggttgactttcctgaggagggatgtgtgtagggacccagctggatggtatggcaagcttgaccagtcatca +atcataaggcaactgtattggaccaaaggacccaaccatgaagatcccaatgaaacgatgatcccacactct +caaagacccatccaactgatgtcacttcttggtgaggcggctctccacggaccgtccttttacaagaaggtg +agcaaattggttatcacagagctaaaagagggtgggatggacttttatgtgcccaggcaagaacccatgttc +aggtggatgagattctctgacctaagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccagtctcgtaccagagatcaacaacga +gacaatggctttggagccagtagcaggaggggcaattgctgctcccctgactgggcaaacaaatttcattga +tccctggattagaaacaactatgtacaagcacctaatggtgagttcacagtgtcccctagaaactcccctgg +tgaaattttactcaatttggaactaggccctgagctcaaccctttcttggcccacctgtctaggatgtacaa +cgggtttgctggtggcattgaggttcaagtcatcatggcgggcaacgccttcactgc---cggaaagatcat +cttcgcggcagtgccaccccacttccccgtcgacaacattagtccttctcaaattactatgttcccacacat +tataatagatgtaagaacccttgaacctgtaaatatcccactacccgatgtcaggaatagtttcttccatta +cagccaaaataatgag---ccccgtatgagactattagctatgttgtatacccctctcagatcaaatggttc +tgcagatgatgtcttcacagtttcttgtagggtccttaccaagccttcccctgattttgagttcaattattt +ggtccccccaactgttgagtctaggacaaagcccttcacaataccaatacttacgattggagaaatgacaaa +ctcaagg---ttccccgtggccattgacatgctacacaccagtcctactgagaacattgttgtccaaccaca +aaatggcagatgcactctggacggtgagttgcagggcaccacacagctggtcacttccaatatctgtgcatt +caggg-----------------------------------------ggtccatccatg-------------- +------------atcaccagac--------------------------------------------ca---- +----atggagacg----------------------------------aacatcag----------------- +----------tggcatttcaacatcactaaccccaatggcactccgtttgaccccactgaggacgtgcccgc +tccacttgggaccccggacttcaagggacaactctacggagtcatctctcaaa---gagaccgagagggaac +tcctggt-----gaaaacaaccagaaggctaac--------agg-----------tcccatgaaggggtgat +ctcaacagttgcgccaaggttcacaccaaagttagggtcagtcatgatcggca---------cttggactac +tgatgatat---aag---aaatcaaccctcca---------------------------gattcaccccag- +--------ttggt------ttgaatgatgatg------------ataattataggcagtgggaactaccaaa +ttattctggagca-ctcacc------cttaacatgggattggcaccctctgtcttccccacctatcctggag +aacaaattcttttcttccgctcctacatgccaa------tgaagggaggata------tggca--------- +--gtccatacatcgattgccttatacctcaagaatggatttctcatttctatcaggaatcagcaccctccca +aactgatgtggctttgattaggtatgtgaaccccgacacaggacgagtcctgttcgaggccaaattacacag +acaaggattcatcaccgttgccaagactggtgacagccccatcaatgtacctgccaatggttactttagatt +tgattcctgggttaaccaattctactctctcgcccccatgggaactgggaacgggcgcaga---------ag +agttc---------agtaatggctggaacttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctctagtaaatgcagg---ggctaatgcaattaatcagaaagttgattttgaaaacaataaatat--- +------------------------------ttacaaaatgcatcatttgctcatgataaggagatgttgaag +gcacaaattgaggcaacaaaacaactgcaggctgacatgattgcaatcaagcaaggggttctgaccgctggc +ggcttttcccccactgatgctgcacgtggggccataaatgcccccatgacaaaagttttggattggaatgga +acaaggtactgggcaccaaatgccacctccacaacctcaatgtcgggtggcttcacagga------------ +ca-----------agttgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gagccaggcccccaaatcaaca--------------------------- +-------------------------------------------------ccc---------------agtag +tgggtcct-----------cagtc------------aggtcaaactctacccagcttactagt--------- +----------ctgagc-------tcacactc------ctctggatcatctcgttccagtggatccacagctg +tcagctctc------tac--------------------------------cat------------------c +ctccaa---------------------------------------taggactagggaatgggtcaatcagca +aaacctcaacttggaaccacacatgc---ctggatctctcaaaacagcttttgtcacaccaccatctagcac +agcctct---agtt------------------------------cgggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctcttcgcat +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK733207.1/1-7444 |Norovirus GII isolate PNV027026 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------cgaccgctggcaaaaccagctcaaacagt +gaaattcac----aacaatgacgccacaccagcgtcaaac------------------atcttcgccaacat +gactgttggcttgaagaaag----ccctgggggcacggcctaaacagcctacccccagggccccttctcctc +ctaaggagaagaag-----------------------------------------------agaaccctccc +tccaataccac--------------------ccccaccacccaatgg------tgaggatattgtcatcaag +tacaccaaac----------aggg---tgaccttgtggagggggtccccacggtttccaccgtggagatccc +ccctacactggacaccgcatatagtgtcccccccttagaccagagggagaaacttgatgccaaagaaccgct +aacaggctcaataattgaaatgtgggatggagagatataccattatgggatttatgtggagcgaggtttgat +tctcggcgtgcacaagccgcctgcagcaattagcttcgcccgcattgagttgacccccctctctctttattg +gagaactgtctacacaccac---cctacctagtggacccacaaaacctgaagaaactccatggtgagtcctt +cccttacaccgcatttgacaacaactgctactccttctgctgttgggttttggacttgaatgattcttggct +caa---cagaaaacatgtgtcaaggactacgggattttacagaccctaccaggagtggaatagaaaaccaat +gcccaccgtggatgaaggaaaacttaagaaagtggccaatgtgttcttgtgtgccatctccggccttttcac +caggccaatcaaggacatcatagggaaactgaaaccattgaacatccttaacatagtgtcaaactgtgattg +gacattccctggtgtcgtggaatccctcatattgcttgctgaattattt---gggatcttctggacaccgcc +agacatctccgctttcgtggcatccctcctgggtgattacgaaatgcaggggcctgaggatatagccactga +gatcgtaccagtcatcctcggtggcattggaatggtcctcggcttcacaagggaaaagatagggcgtatact +gagttctgccgcctcatcactcagagcatgcagggagattggcaactacggtatagaggtggtgaagctcgt +gatgaagtggttcttcccttccaagaacgaggcgagcgagatggacatggtcagagcaatagaggatgcagt +gcttgatttcgaagccattgagaacaaccacatgacatctctgctaaaagacaagaacagcctcgcgacctt +cctcagggcactggacatggaagaagagaaagcacggaaactgtctaccaaatctgcctctccggacattgt +tggaaccataaatgcactcctagccagaattgcagctgccagatccctcgtccaccgcgccaaagaagagat +gtcatccaggatgcgtcctgttgtcatcatgatctctgggcggccagggatagggaaaacacaccttgcacg +cgacctggctaagaagatggcagcaaccctcgctggtgaccaaagggttggccttgtcccgagaaacggtgt +tgaccactgggatgcatacaagggagagaggatagttctgtgggatgactacggcatgagcaacccaatatc +agatgcactaagactccaagaacttgctgacacctgtcctctaacactcaactgtgacagaatagagaacaa +ggggaaagtatttgacagtgacaccataatcatcaccaccaatctggccaaccctgcccctcttgactatgt +caatttcgaggcatg-ctctcgccgcattgactttctcgtctatgcggactcccccgctgttgacaaggcaa +agagagacttcccggggcaacctgacatgtggaaggatgcattcaagcaggacttctcacacataaaactac +aattggcaccacaaggaggctttgacaagaatggcaacaccccacatggcaagggcgtgatgaaatccctaa +ccacacattctctcattgcccgcgccacggggctcctacatgagaggctggatgaatttgatctacaggggc +ctgaactcccagtctataactttgaccagaacaaagtggcgtcgttcaggcgactcgccgccgacaacaagt +atggtcttatggaaaccatcaaagctggtaataaactaaaagaggtcaagacactggaacagttcaaggagg +ctgtgaaaaacatacggataaacccctgcagaataatctacaactccatagcttatgacttggactcgaatg +gagcaggcaaagtcaatgtcaagaaggtgggcgacaccaagatccagacgagcaatgagctcagctccgcac +tcaccaacttacgcggcgctagaattagatactatgtgaaatgcttccaagaaatgatctattcgctcctgc +agatcgctggcgcagcgtttgtgacgacgcggatggccaaaagaataa------acatcaacaatatctggt +ccaagcctga------------ggaaaa--------gccgattgtcagcccagaacccccagcgcctcca-- +--------gaagaac---actggaccatcgccccaagcgacgcgattcaggagggcaagaagggcaagaaca +agagtggcagaggcaagaaacacactgctttctccagtaagggtctcagtgatgaggagtatgatgaataca +agagaatcagggaggagagacaaggaaaatactctattgaagaatacctccaagacagagaccgatac---t +atgaggaattggcaatagcaaaagcaactgaagaggatttctgtgaggaggaggaggtcaaaattaggcaga +ggatctttcgtcctaccagaaaacagcgcaaggaggaaagggccaccctagggttagtgacaggcagtgaaa +ttaggaagaggaacccagatgacttcagaccgagagggaagttgtgggctgatgatgatcgtagtgtcaact +ataatgagaagatagacttcgaggcccctcctagcctgtggtcaagaatagtcaactttggatcaggctggg +gtttctgggtgtcat-ctaacctgttcataacctccacacacgtgatccccccaaacatatcagaagcattt +ggtgtcccaattaatcagatacaggttcacaggtgtggcgagttctgcaagatgaggtttcccaaggccatc +aggcctgatgtctctggcatgattctggaggaaggggcccccgaagggacagtggtgaccatacttataaag +aggacaactggagagctcatgccattggcagctcgcatgggcacacacgccaccatgaagatccaagggaga +atgattggaggtcaaatgggtatgctcctcacaggttccaatgctaagaacatggaccttggcaccgtcccg +ggtgattgtggatgcccgtatgtctacaagagaggaaatgattgggttgtgatcggagtccacactgccgcc +gccagaggaggcaacacagtgatctgtgccacccagggtccagatggggaggctacactggaagggggtgat +aaccatggcacctactgtggggcgccaatactgggacccggtagcgctccaaaactcagcaccaagacaaaa +ttctggcggtcctccaatgcaccactcccccctggcacgtacgagcctgcctaccttggtggtaaagatccc +agggtcaaagggggcccatccctgcaacaagtcatgagagaacagctgaaacccttcaccgccccacgcggc +aagccacccaagcccgcagtcctggaggcggccaaggagactatatgtggtgtgcttgaacagaccattgac +ccaccccaacagtggtcctacgcgcaggcctgctcctcactagacaaaacaacatcaagtggccacccccat +cacaagaagaagaatgacaattggaatggagaatcattcactggcgtgctagccgatcaggcttccagagca +aacctcatgtatgagcaggggaaacacatgcagcccgtgtacacagcagcacttaaggatgagttggtgaag +accagcaagatatatgacaaagtcaaaaagaggctcttgtggggatcagacctgggaaccatgattcggtgt +gcaagatcttttggtgggcttatggatgaaatgaaggcaaactgtgtaaatctaccaataagagtgggtatg +aacatgaatgaggatggccccataatctttgagaagcactccaagtacaaatatcattatgatgctgactac +t-ccaggtgggactcaacacaacaaaggcatgtccttggggttgctcttgagatcatgg-tcagattttcag +cagaacctgagtt-ggcacagatagtggctgaggatctcctgtcgcccagtgtcgtagacgtgggtgacttc +aaaatcacaataaacgagggcctcccatctggagtcccatgcacatcacagtggaactcaataacccattgg +ctgctgactctgtgcgcaatgtcagaagtttctggattgtcaccagacgttgtgcaagcaaactcatgcttc +tcattctatggggatgatgagatagtcagcacagacattaaattggatgccttcaaattaacagaaaagctc +aaagagtatgggctgatcccaaccaggccagacaagacagaaggaccactagtgataaaagagaaactagag +gggttgactttcctgaggagggatgtgtgtagggacccagctggatggtatggcaagcttgatcagtcatca +atcataaggcaactgtattggaccaaaggacccaaccatgaagatcccaatgaaacgatgatcccacactct +caaagacccatccaactgatgtcacttcttggtgaggcggctctccacggaccgcccttttacaagaaggtg +agcaagttggttatcacagagctaaaagagggtggaatggacttttatgtgcccaggcaggaacccatgttt +aggtggatgagattctctgacctaagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggagccagtagcaggaggggcaattgctgctcccctgactgggcaaacaaatttcattga +tccctggattagaaacaactatgtacaagcacctaatggtgagttcacagtatcccctagaaactcccctgg +tgaaattttactcaatttggaattaggccctgagctcaaccctttcttggcccacctgtctaggatgtacaa +cgggtttgctggtggcattgaggttcaagtcgtcatggcgggcaacgccttcactgc---cggaaagatcat +cttcgcggcagtgccaccccacttccccgttgacaacattagtccttctcaaattactatgttcccacacat +tataatagatgtaagaacccttgaacctgtaaatatcccattacccgatgtcaggaatagtttcttccatta +cagccaaaataatgaa---ccccgtatgagattattagctatgttgtatacccctcttagatcaaatggttc +tgctgatgatgtcttcacagtttcttgtagggtccttaccaagccttcccctgattttgagttcaattattt +ggtccccccaactgttgagtctaggacaaaacccttcacaataccaatacttacgattggagaaatgacaaa +ctcaagg---ttccccgtggccattgacatgctacacaccagccctactgagaacattgttgtccaaccgca +aaatggcagatgcactctggacggtgagttgctgggcactacacagctggtcacttccaacatctgtgcatt +caggg-----------------------------------------ggtccatccatg-------------- +------------atcaccagac--------------------------------------------ca---- +----atggagacg----------------------------------aacatcag----------------- +----------tggcacttcaacatcaccaaccccaatggcactccgtttgaccccactgaggacgtgcccgc +tccacttgggaccccggacttcaagggacaactctacggagtcatctctcaaa---gagaccgggagggaac +ccttggt-----gaaaacaaccagaaggctaac--------agg-----------tcccatgaaggggtgat +ctcaacaattgcaccaaggttcacaccaaagttagggtcagtcatgatcggca---------cttggactac +cactgatat---aag---aaatcaaccctcca---------------------------gattcaccccag- +--------ttggt------ttgaatgatgatg------------acaattatagacagtgggaattaccaaa +ttattctggagcg-ctcacc------cttaatatgggattggcaccctctgtcttccccacctatcctgggg +aacaaattcttttcttccgctcctacatgccaa------tgaagggaggata------tggca--------- +--gtccgtacatcgattgccttatacctcaagaatggatttctcatttctatcaggaatcagcaccctccca +aactgatgtggctttgattaggtatgtgaaccccgacacaggacgagtcctgttcgaggccaaattacacag +acaaggattcattaccgttgccaagactggtgacagccccatcaatgtgcctgctaatggttactttagatt +tgattcctgggttaatcaattctactctctcgcccccatgggaactgggaatgggcgcaga---------ag +agttc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctctagtaaatgcagg---ggctaatgcaattaatcagaaatttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcatttgctcatgataaggagatgttgaag +gcacaaattgaggcaacaaaacaactgcaggctgacatgattgcaatcaagcaaggggttctgaccgctggc +ggcttttcccctactgatgctgcacgtggggccataaatgcccccatgacaaaagttttggattggaatgga +acaaggtactgggcaccaaatgccacctccacaacctcaatgtcgggtggcttcacagga------------ +ca-----------agttgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------aaaccaggcccccaaatcaata--------------------------- +-------------------------------------------------ccc---------------agtag +tgggtctt-----------cagtc------------aggtcaaactcgacccagcttactagt--------- +----------ctgagc-------tcacactc------ctctggatcatcccgttccagtggatccacagctg +tcagctctc------tac--------------------------------cat------------------c +ctccaa---------------------------------------taggactagggaatgggtcaatcagca +aaatctcaatttggaaccacacatgc---ctggatctctcaaaacagcttttgtcacaccaccatctagcac +agcctct---agtt------------------------------cgggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctcttcgcat +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762719.1/1-7094 |Norovirus GII isolate Hu/NP/2013/GII.Pe-GII.4_Sydney2012/ETR-NV-093 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------tatcatwacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctayggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccgatctactcagagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatacggatatcacaccttgcgac +ggagctgggcaaaaagatcgcggcctccctgacaggggaccagcgtgtcggacttatcccacccaatcgtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctyacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgacg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtatwccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgcccgggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacttaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggcgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgagaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtyccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcacgatatctgcagagctaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggt------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762720.1/1-6955 |Norovirus GII isolate Hu/NP/2013/GII.P21-GII.21/ETR-NV-099 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------------------------ccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gcttggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacgggcttctttcggccttaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaagaaggtggccaatgttstcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggctggagatactcawattggt +catgaaatggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctaccta +catgagaactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctgctggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctggctag +agagttggcaaagaagattgcctcctcactcacaggtgatcagagggtgggcctcatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagacttcaggagcttgctgacacctgccctctgacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaacttggccaacccagcgccactggattatgt +caacttygaagcttg-ctctagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccgcaaggaggttttgacaagaacggcaacacccctcatgggaagggtgttatgaagaccctca +ctgccagttctctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgagaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcatagtcaagaaatgccagcttgtgtatggcgggagcacatacatgctcgaatctgatg +gcaaaggcaatgtgtgtgttgaaagggtgaagaatacaagtgtgcagattaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgctttcatcaccacgcgcattgcaaaacgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaagcctaaa-- +-gat----gacgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccgacaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccgagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattcccaaaggcgcacaggagttcttt +ggagtacctatcaaacaaatacaaattcataaatcaggggagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgattgtggctgtccctacatctacaagagggggaacgactacgtagtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaactcaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcagagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagcc +aacctaatgtatgaggaaggaaagagcatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgacaagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctgttc +tctttttayggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgcgatccggctgggtggtttggcaaactggatcaaggttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagttcacagtctcccctagaaattcccctgg +tgaagtacttctaaatttagaattaggcccagatatcaatccatatttggctcacctttcaagaatgtataa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacagc---aggaaagatcct +ctttgcagcagtccccccaaatttccccgttgatatgcttagtcctgcccaaattacaatgcttccccactt +aatcgtagatgtcagaactttggagcctattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagttcacatattt +agttcccccctcggtggagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ctctaga---ttcccagccccgatcgatcagttgtacacttcacccaacactgatatagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---atac------------ +-----tcaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacat---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------gaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtacccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccatttttaccaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcacag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgtaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgagtatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcttccttccaacatgacaaggacatgcttcaa +gcccagatcaacgcaacaaaacaattacagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctat--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgttat--------------------------------caaattctagctt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762722.1/1-7168 |Norovirus GII isolate Hu/BT/2015/GII.P7-GII.7/ETR-NV-127 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------acatcgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccctccattgagcgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactctactg +gaggcccgtttataccccta---actacttggtctccccggacacattgaagggcctcgctggtgagaagtt +tccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaaggtgcatttccagaactaccggctttttcaaaccataccagtcttggaacaggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctttgtgcactcggctcgctattttc +aaaaccaattaaagatctattaggcaaactcaagccattgaatctactacacttgcttgcgtcctgtgattg +gacgtttgcaggtatagtggagacagttatcttaatggcggaacttttt---aatgtcttctggaccccacc +agatgtctctaattttatagcttccctgataggtgattttgagttgcaagggcctgaagacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaattacgcccttgacatactaaaattagt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaataaccacctcacagcccttctcaaagacaaagacagcctcacggcttt +catgaagrccctggatctagaagaagagaaggcgaggaaactgtccaccaaatcatcctcaccggacatagt +tggcaccatcaacgccatactagctaggatagctgctgctagatccctcctacataaagccaaagaggagat +gttcagcaggatcagaccggtggtcgttatgatctcgggcagacctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggtgaccagcgagtcggtctcgttcctcgcaacggtgt +cgatcactgggacgcctacaggggagaaagggtggttttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactgcaagagttggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacctagtcaatcccgcgcccctcgactatgt +gaactttgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagatcattttaagccagacttttcccatattaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggtaccatgcggtccctaa +cccaggggtccctaaccgcaagagttgcaggtcttgtccatgagaggagagacgagttccagctccaaggaa +atgacctacaaacatacaattttgacaccaacagagtctccgcatttaggaaattggctgcagacaacaagt +atgggaacatcgacaggatgagagtgggtgcggcactcaagaatgtgaagaccctagaagaccttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaacg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtgaatgaggtatattcagcac +ttctcagacttaggcaagcgagggccaggtactacatcagctgcttccaagacctcgtttatactctcatac +aggttgccggggcatcattcgttgtca---------------gtagga------tctccagaaggttctgct +gggagaggtgggtcaaaccgaccgaggc-------------ccaggaggcgaatgagtccga-----aaagg +aagtagctcaaggta---gatgggaagttgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggtaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaataccttcaagaccgagaccgctat---t +atgaagaagtagcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggctaagataagacaaa +gaattttccgccccacaaggaaacagaggaaggaggaaaggggtgtgcttggcttggtcaccggctcagaca +tcagaaagaggagaccagacgatttccaaccaaaaggcaacctatgggcagatgacaccagaagtgtggact +acaatgaaaggcttgattttgaagcaccccctagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctagagggattaaggaactcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacagggctagtgctggaggaaggcgccccagagggtactgtctgttctgtgctcgtaaaa +agacccacaggtgagatgattccccttgcagtgagaatgggcacacatgcatccatgaagatacagggcagg +accgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatctcggcactggccct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgctacccaagggcaagatggggaagcggttcttgaggggaatgag +gaccttggcacctactgtggcgccccaattctgggccctggcaaagcgcccaagctcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgagcctgcttacttaggaggcaaagaccct +agagtggaaaaaggcccctccctgcagcaagtcatgagagatcagttgagacccttcacagaacccaggggc +aaaccaccaagaccaggtgtgttggaggaagccaaaaagacagtgatcaaygttctagaayaaaccattgac +ccccccaagccatggacctattcgcaggcatgtgcctcactggacaaaaccacctctagtgggtgtccccat +cacgttaagaaaaatgacctctggaatggggagaccttcactggtaaacttgcagatcaggcatcaaaagcc +aacctcatgtttgaggaaggtaaacacatgacaccagtgtatacagcggccctcaaagacgagcttgttaag +actgacaaagtctatgggaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtsc +gccagggcttttggtggtcttatggacagcatgaaggcaagttgtatagctcttccttgtagggtgggaatg +aatatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggattcaacccaacaaaggagcattctttctgccgctatggaggtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggctcctagccagctcgatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcgcaatggaactcaatagcacattgg +atactgactttgagtgcgatggcagaagtgtcaggtctttcaccagatgttgtccaagctcactcttgtttt +tcattctacggggacgatgagatcgtcagcactgacattaaccttgaccccatgaagctaacacaaaaactc +agggagtacggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctacgtaggtcaattgcccgggacccagctggctggtttgggaaactggaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccacgagaacccgtacgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcagcaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgttgggcaacaaaatataattga +tccctggataagaaataattttgtgcaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaattgaacccctatcttgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccctcacaaattacgatgtgtcctcatgt +tataattgatgttagacaattagaaccagtcctattgcctatgccagacattaggaataatttcttccatta +taatcagggyaatgat---ccaaaattgagattgatagctatgctttatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaagccgtcacctgattttgaattcacattttt +agttccccctactgttgaatccaagaccaagcagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtaccagtggaaatgatgtacacaggcacgaatgacaaccttgttgtccagcgaca +gaatggtagcgtcacacttgatggcgagctaataggtaccacacccttcttgcctgrcaagatctgcaattt +caagg-----------------------------------------gggtgctcataggtaa---------- +----------gaatggagatgt-----------------------------------caaatcctattg--- +--gatggata-------------------------------------------------------------- +-----------------tggaaattaccaacaccgatggcaccccaattgaccccacagaagatacacctgg +ccccattggttcacctgactttcaaggcayactctttggcgttgcgagccagc---gcaacaagaatga--- +------------gcaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------tcttcaccccag- +--------ttggtgtagcaggtg---acactt---------cccaccctttcagacaatgggtcctgcctcg +atacggtggacat-ctgacc------aataacacccacctggctccagcagtggcccctctattcccaggtg +agcagattctgttctttagatcacaaataccta------gctcaggcggcca------tgaat--------- +--tgggttacatggactgcctcgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcataa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +ggtcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctatcaaccaaaaagttgagtttgattataacaaacaa--- +------------------------------ctccaaaatgcatctttctcccatgataaagaaatgctccaa +gcccaaattgaagccactaaacgtctacaacaagagatgattgatataaaacaaggggttctggcagctgcg +gggttctctcctacggatgccgcaaggggttctgtcagtgcgccaatgacaaaattagttgaytggagcggc +actagatattgggcacctggtgccatgaggacaacaggttattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------aca---------------------------a +tcaaaaca--------------tacaacctcttaaag----------------------------------- +----------------------------------------tagatcctcctccttc---------------- +---ttctt-----------cgagtgg------------ttcctctgtttcctctg----------------- +---------------------tcaaaacaca---atcaaccaccctctcggg-cacttcaag--------gg +tgggctc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggtc +gggtac-------------------a--------------------aggacgtcagattgggtgcgcagcca +aaatgagaggttgagcccttacatga---aaggagcgctgaaaacagcgtatgtaacaccaccatccagtag +ggca-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762723.1/1-6471 |Norovirus GII isolate Hu/BT/2013/GII.P15-GII.15/ETR-NV-199 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) gene, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------atacacagtcccaccgttgagtgagagggagcacaggccagcaacagagccatt +gcccggcactatacttgagatgtgggatggtgagttctatcactactccatatacgtggacaatggcaaggc +ccttggtgttcacaaaccaccagcagcaattagcctagcaacgatagatttgacacctatatcgttgtattg +gagaccggtttatacaccgc---cgtaccttgttcacccagagacgctcaagggactggctggcgaaaagtt +cccctacacggccttcagcaacaactgctacaacttctgttgctgggttctggacctcaatgattcatggtt +gaa---ccggagatccataactagaacaactggattcttcaaaccctaccaatcctggaacaggaaacccct +tccaacagtggatgatggcaagatcaagaaggtcgcgaatgcagtcctgtgcgccctaggatcacttttctc +caagcccattaaggacctccttggaaagttaaaacccctcaatctcctgaacttgcttgcatcatgtgactg +gacctttgctggcgtagtggagacagtcattcttgcagcagagctcttc---aatgtcttttggactccacc +cgatgtctccaacttcattgcctctataattggcgacttcgagatgcaaggaccagaggaccttgctgtgga +gcttgtccctgtcatcatgggaggcattggtatggtgttagggtttacagctgagaagatagggcgtatgtt +atcatctgcagcatccactctcagggcttgcaaggaccttggtaactacgccttggacatcctgaaactagt +catgaaatggtttttccctaaaaaggaggaaaaggccgagatggagactctgagggccattgaggacgctgt +cctagacatggaggcaattggaaacaaccacctcacaacactgctcaaagacaaagatagcttgagcgccta +catgaagaccttagacatggaggaggagaaggccaggaaactctccactaaatcatcatcacccgacattgt +tggcaccatcaatgcgatcctcgcacgcattgctgccgcaaggtcactcctgcacaaagccaaagaggaaat +gttcagtcgagcaaggcctgttgtcgttatggtatctggaagacccggtatcgggaagacatacctggctag +acagcttgctaaatcgattgcaaacagcatgagtggtgatcagagagtgggactcgtcccccgcaatggggt +tgaccactgggatgcctataggggtgaaagagttgtcctatgggatgactatggcatgggaaatacgatcaa +agatgccctgactctgcaggagttggctgacacctgcccagttaccctcaactgtgacagaatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataataacaaccaaccttgtcaaccccgcccccctcgattatgt +taattttgaggcttg-ctgtaggcgaattgacttccttgtttatgctgaggcaccggacatcgagaaagtca +aaaaggattttcctggacaacctgacatgtggcgtgaccatttcaaagctgattcgtcacacataaagttat +ccctagccccacagggtggttttgacaagaacgggaacacccctcacgggaagggcaccatgaaaactctca +cgctacactcactcactgcacgtgtgatgggtttagtatgtgagaggaaggatgagttccaattacagggtg +atgaactacaggtttacaactttgacacaaacaaggtctctgcatttagaaaactagcagctgacaacaagt +acagctttgtggagacaatgaaagtcggtgcagtcctcaagaacgtaaaaaccctggaagatctaaaatctg +ccctcaagggagtcaagttcaaagagtgtgaaataatttacaagggagccaagtacagagtcgcctcggatg +gttgtggcagtgtctcagtttctaagatcaaggatgttgcatcacagacagccaatgaagtgcacacagcac +tcctgagattgaggcaagcccgggccaggtattacatcagctgcttccaagacctcatatacaccctaatcc +aggttgctggagcctcatttgtggtgc---------------atagga------tctcaaaaagattctcat +gggaccgctgggtcaaacccagtgagag----------ccctcaggaggaagaacaacccag-----tagtg +aggtggccacaggga---gatgggaaattgagccaaaagacacagaccctgaaggcaaaaagggtaaaaaca +agaagggaaggggaaggaaacacacggctttctctagtaagggtctcagtgatgaagagtaygatgaattca +aaagaatcagagaggagaagaacggcaaatactctatagaagaatacctccaggaccgtgacaggttt---t +atgaggaagtggcagttgcaagagcaacggaagaggacttctgtgaggaagaagtggcaaagatcagacaga +gaatcttcaggcccacaaagaagcagaggaaggaggagcggggcgtcctagggctggtcaccggttcagaaa +tcaggaagagaagaccagatgacttccagcctaaaggtaacttgtgggctgatgacaccaggagcgtggact +acaacgagaagctggagtttgaggcccctccaagtgtgtggtcacgcatcgtacccctcggcactggctggg +gtttctgggtctcct-ccaaccttctcatctctctggaacgagtcctgccaaaagggttgaaggagctgttc +ggggttgatatcaaacaaatccaaatacacaagtcaggtgagttttgcagattcaggtttccaagaccaatc +aggccagatgtcacaggcctcatccttgaagaaggggcccctgaaggcacggtgtgttctatcctcgtcaaa +agaccgactggagagatgataccactcgcagtgaggatgggtacccacgcttccatgaaaatccagggtaga +acggttggtggtcaaatgggcatgttactcacaggagcaaatgccaaaaacatggatttgggcacgaaccct +ggtgattgtggatgcccgtacatttttaagaggggcaatgacattgttgtagctggagttcacactgcagct +gcacggggtggcaacactgtgatctgtgccacgcaaggagctgatggagaggccgtccttgaaggaggagag +gacaaagggacatactgtggtgccccaatacttgggcttgggagggcccccaaactcagtaccaagacaaag +ttctggcgatcctcccctgatgcgcttcccccgggaacgtatgagccagcatacctaggtggaaaggaccca +agggttgagaagggcccatcactccagcaggtcatgagagaacaacttaaacctttcaccgaacccagagga +aaacccccaaaacccaacgttcttgatgaggcaaagaaaactgtgatgaacgtgttggagcagactataagc +cctgccaaaccctggtcatactcccaagcatgtgcttcacttgacaagacaacttcaagtggtagcccccac +cacctgagaaagaatgatcattggaatggtgaatctttcaccggtcctttggccgatcaagcttcaaaagca +aacctaatgtatgaacaggcaaaacacatgagccccgtttacactgcagccctcaaagatgaactagtcaag +actgataaaatctacaagaaaataaagaagaggctgttgtggggttctgacctaggtaccatggtcaggtgt +gccagggcctttggggggttgatggatagcatgaaggagagctgtgtgatgttaccctgcagagttggaatg +aacatgaatgaagatggaccaatcatttttgacaaacatgcaaagtacaaatatcactacgatgcagattac +t-ccagatgggattccacacaacaaaggtgcattttgtctgctgccatggaggttatgg-ttaagttctcag +ctgaaccggaatt-ggcacaagtggtcgctgaagacttgctcgccccaagccaactcgacgtgggcgatttt +gtggtgtcagtccaagaaggtctcccttcaggtgttccgtgcacttcccaatggaactccatagcacactgg +atcatcacccttagtgcaatggcagaagtttctggcctctccccagatgtgatccaagctcactcatgcttc +tctttctacggtgatgatgaggtagttagcacagacatcaacttggacccagcaaagctaaccttgaaactt +agggaatatggactggtccccaccagaccagacaaaactgagggcccactagtcatcacagaggacctccat +gggttgaccttcctacgtagacacatcacacgagatcctgctggatggtttggaaagttagaccaggattca +atcttaaggcaactctactggactagaggacccaaccacgagaacccctacgagtgcatggttccacactca +cagcgtgcaacccagttaatggcgctgttgggtgaggcatcgctgcacggtccccagttctacaagaaagtc +agtaagatggttatcaatgaaattaagagtggtggtctggaattttacgtgcccagacaggaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatctggctcccgacggtgtgaatgag +gatggcgtcgagtgacgcgcccgtttctggcaccgatggtgcggcaggactcgtcccagagagtcaacaaga +agtcttgcctttagagcccgtcgcgggagttcagctggctgctcccgtagcagggcaaagtaatataattga +cccctggattagaatgaattttgtgcaagccccggccggtgagttcactgtgtcccctcggaacgcaccggg +tgaggtacttattgatttagaattaggaccagaattaaacccctatctcaatcaccttgcaagaatgtataa +tgggtatgtgggaggaatggaggtggaagttgtccttgccgggaatgcgttcacggc---gggtaagatctt +attcgcagctgtgccccccagcttcccaacccatggcatctctgcagcacaggcaactatgttaccacatgt +gattgtggatgtcaggcagctggagcctgtccggctccctctccctgatgtcaggaatgtgatgttccactt +ctgtcaagaaaataaggaaccgcgcatgagaatcgtggcaatattgtacacccctctccgcgccaacggtgc +gggtgatgatgttttcactgtctcatgtcgcgtgctaacaaggccttcaccagattttgattttattttctt +ggtccccccctctgtagagagtaagttgaaacagttcaccctcccaaacctgcagccaaatgaaatgaccaa +ttcaaga---ttccccactggtatcacacaactctacaccagtccaaacaccaatttggttgtccagttcca +aaatggcaggtgtctgcttgatggcacacttctcggcaccacccctgtcagagctgctgacatttgcagttt +cagag-----------------------------------------gagtcacctcaactgaa--------- +----------------------------gt----------------------------tgacgcaacta--- +--acagttccaga--------gtggcagggt----------------cacacaga----------------- +----------attatggtgcagctcaaggagccagatggagaggagttttcacccacaggtcccaatcctgc +ccctgttggcactccagactttcaagcagccatatttggcactcttagtcaaa---gaaacactggcggg-- +------------gctggg---caaaactccaac--------aga-----------gcccacttcgcatattt +ctatactagaaaccccacatttgcaccaggcatagggaccgttgtgtt---tt---------cttttgacac +cactgattt---tcagaatcgccaacctacca---------------------------aattctctcctt- +--------ctggtgtatttgatgatgattctt---------ctgagccctttaatcaattttctctaccata +ttataatggatca-cttggtgcagtggacgctgggaaattggctccgcctgtagcgcctaattacccaggtg +agcagattctttattttagaggtaatatacctt------tcaaaggtgggta------tggag--------- +--agggtgaaattgatagcttgcttccccaggaatggatcacccacttttatgcagagcaggctcctacaca +aggtgacgcagccctgctgcgctactataaccctgatactgatagagtctcttttgagtgcaaacactattg +tgaaggactcatcacaatcaactacacggcaaccaatgcacttgcagagccggtcaatggagtcttcaggtt +tgagggctgggttaacaaattctacacactgacccccatgggaaatggcaatggccgcaggggtagaagaag +ggagt---------tataatggctggagctttctttgcaggtcttgcttctgacgatcttggcagcggttta +gctcc------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN416945.1/1-6422 |Norovirus GII isolate G19_047 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------gaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgctatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agctgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaggaagatcgcagcttcacttacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttgcaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccccagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcttcagggttactccacgagaggttggatgaatatgagctgcagggcc +caactcccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggactgttggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagaccttaaacagg +cactcaagaatgtcgcaattaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccacagtgcagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcaggtattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaagacacagagga--------aattgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagctagaatgggaacccatgcgaccatgaagatccaagggcgc +actgttgggggtcaaatgggcatgctcctaactggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgct +gcccgtgggggaaacactgttatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagactaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggaggggaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctttggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcactatgatgctgattac +t-cccggtgggattcaacacaacaaagagctgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttcccccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgatattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaagctc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggccccttgtcatttccgaagacctgaat +ggcctaaccttcctgcgaaggaccgtgacacgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatatactggactagaggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagaattgaaggagggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgagtaattttgtgcaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaatccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttgattgcaatgctgtacacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacctttcaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccatgccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gatttaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgcaca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagttgcacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgacatactcacaaacactgta +gggtctctagtcaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccccactgatgcagctcgc--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN416946.1/1-7262 |Norovirus GII isolate G19_045 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------act-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgacg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcaaaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagggagcacagaccagccaccgaaccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccttacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgctcttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttactcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctaataggtgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgccgagaagataggtcgcatgct +gtcgtcagctgcatcaacgctgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaacaatcatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaaactgtccaccaaatcatcctcaccagacatcgt +cggcactattaatgccatactggccaggatagctgccgccaggtccctcttacacaaggccaaagaagaaat +gtttagcaggatcagacctgtggtcgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtagggctcgtcccacgcaacggagt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agacgccctgacactgcaagaactggctgacacctgcccagtgactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaactaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctctagacgggtcgactttctggtctatgcggagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaagatcattttaagccagacttttctcacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggaa +atgacctccaaacatacaactttgataccaacagggtctctgcatttaggaagctggccgcagacaacaagt +acgggatcatggagacgatgagagtgggcacagcgcttaagagtgtcaagaccctggaagacctgaaagttg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccaaatatcgagtctcttccaatg +gtaaaggttctgtctctgttgataaagtcgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcaggcttaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaagagattctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---aatgggagattgaacccaaagacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggtaagaaacacacagctttctccagcaaaggccttagtgatgaggagtatgacgagttca +agagaattagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgtcccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggatt +acaacgagagacttgatttcgaagctcccccgagtgtctggtctagaatagtcccattgggtactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaactcttt +ggagttgaagtcaaacagatccaaattcacaagtctggagagttctgcaggttcagattcccaagaccaatc +agaccagatgtcacagggctcgtgttggaggagggtgctccagaaggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggaacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacaaagaccaag +ttctggcgttcgtcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggaccct +agagtagaaaagggaccatccctgcagcaagtcatgagagaccaactaaaacctttcacagaacccaggggc +aagccacctagacccgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgat +cctgctaagccatggacctactcccaagcatgcgcttcactggacaagaccacctccagtggtagccctcat +catgtcaggaaaaatgaccattggaatggggaatcctttactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagacgagctagtcaag +actgacaagatctacaggaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtgggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagttcaggagggtctgccgtcaggggtaccatgtacatcacaatggaattcaatagcacattgg +atcctaactttgagtgcaatggcagaagtgtcgggtctctcaccagatgttattcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctagtccctactcgacctgacaaaactgagggtccccttgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggatccagctgggtggtttggaaaattagaccaagactca +atcctcaggcaattgtactggacaaggggccccaatcatgagaacccatatgagagcatggtcccccattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtc +agcaagatggtcattaacgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtggtgggagcttcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgttcaagcaccacagggtgagttcactgtctcgccgaggaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgctgtgccaccacatttccccgtggaaaacatcagtgcagctcaaataactatgtgcccccatgt +gattgttgatgtgagacaacttgagccagtactcctaccccttcctgacataaggaataggttctttcatta +caatcaggagaacact---ccccggatgagactagtggctatgctttacacccccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttaacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgttgaatcaaagactaagccttttacactacccatattaactcttggtgagctatctaa +ttccaga---ttcccagccccaatagatatgttgtacactgatccaaatgagggaattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +cagag-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggaggaggg----------------atcaccca----------------- +----------ctccatgttcaattaaagaaccttgatggcacgcagtatgaccctactgatgaagtgccagc +agtcctcggtgccattgatttcaaggggactgtctttggggtggccagtcaga---gggacgtgtcaggaca +-----ac---aggtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactagggtccattctcat---gc---------actcagagtc +ggacgactt---cgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggcgaca---------------------acgactggcatcagtgggagctgcccga +ctattctggacac-ctaacc------ctaaacatgaaccttgccccagcagttgctcctgcatttccgggtg +agaggattcttttcttcaggtcaattgtcccgt------ctgctggtggcta------cggct--------- +--ctgggcaaatagattgcctcataccacaggagtgggttcagcatttctaccaagaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggcttcatcaccgtggctaattctggcaacaaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggtgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgctggcgaccaagcagttgcagcaggagatgatgaacattaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggctgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccccgttca +ta-----------agtctcctgctcctccccagcatgttgtttc---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagttctccttcttctgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgctgtcag-------cagg--------aa +ctgggtc----c---tccag-------------------gtccatctccacac---------ctacagctac +ccccac-------------------ctt--------------gtctaggaccagcgactgggttaggggaca +gaacgagaggcttggcccgttcatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC509011.1/1-7076 |Swine norovirus SwNoV/Sw1/2018/JP genes for RNA-dependent RNA polymerase, capsid protein, VP2 small basic protein, partial and complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------------------------------t +tttgggtgtgcacaagccagcagctgccatttgcctagcgaccattgagttgactccgatttccctctactg +gagagtcgtctacacacccc---aaaactctatccctatagactcattgcgccgtctggcaggcgagcgctt +cccctacacagcttttgacaacaactgttacaccttctgttgctgggtcttggacctcaatgattcatggct +ctc---taggaggatggtcactaggaccacgggtttctttagaccctaccaagattggaataccagacccgt +ccctacagtggatgacagtaagctcaagaaggttgccaacgtgattttgtgtggtctaacctccctcttctc +caggcccatcaaagacataatcgggaagcttaagcccctcaacctcatcaacatattggcaacctgtgactg +gacttttggtggaattgtggaatcccttgtcttggtgggtgagcttttt---gggatcttttggacaccacc +ggacgtcaccagcttccttgcttcaattttggatgatttccaactccagggcccagaggatctagcagccga +ggtcgtcccagtgcttatggggggccttggattagtccttggcttcaccacggaaaaagttgggcgcatgct +gtcgtccgctgctgcaactctgcgcgcttgcaaggaccttggggcctatggctttgacatactgaaattagt +agtcaagtggttcttcccgaaaaaggaggagcaagccgagcttgagatggtgcgctccatagaggacgccgt +tttagaccctgaggcgttggaaaacaaccatctcacaaccctgctcaaggacaaggacagcctgacggcatt +catgaagaccctcgacatggaggaagagaaggcgcggaagctttcaacgcgctcgtcgtcaccagacattgt +tggcactataaacgccctactcgccagaatctcggcagccaggtcgctcctccacaaggcccgggaagagct +ctgtgccaggatccgcccagtggtggtcatgatttctggcaggccaggtataggtaagacccacatggcccg +ccatttggcacaaaaagtcgccgcagccatcggtggtgacaaaagaatcggcttggtgcctaggaatggtgt +tgaccattgggacgcctacaaaggggagcggatcgtcttgtgggacgactacggaatgagcaacccaatcaa +agatgctttgacgctccaggaattggccgacacgtgcccagtcaccctaaactgtgataggattgagaacaa +gggtaagctctttgacagtgacatcattgtgataaccaccaatttgaccagtcccgccccgctcgactacgt +caatttcgaggcttg-ttccaggcgggtggactttctggtctatgcagaatcaccagatgttgagaaagtga +agaaggagttccctggccagcctgacatgtggaaagacgcataccagcaggaccactcacacatcaaattgc +agctggctccacaggggggttttgacaagaacggtaacaccccttatgggaagggcgtgatgaagacgctca +cccagaattcccttgtggcgcgcgtcgctgccctcgtccatgagagagctgacgagttcgccctccagggcg +atgacctgcccctctacaactttgacgtggataagataaactccttcaggaagatggctgccgacaacaggt +atggattctttgagacaatgaaagtcggggctgccctcaaaaatgtggactcaatagaaggtctgagaactg +ctctcaaaggggtcactctgaaaccctgcaaggtggtctataaggggacaatctatcagattgaatcaggcc +gc---ggcgggctcacaattaagaagctggaggaccgctacgcccagagttctgggtccctgtttggtgtgc +tcacgagagtccgccaggcgagggccaagtactaccttaagtgttttcaggagctaatctacaccactctgc +aaattgctggggccgccttcgtgacgtcaaggatagtcaaaa------------------ggtccaactggt +gcaattcctggcgacagacagctgaacc--tagtacctcgaccccgatcgaggaaccaccc---ttggcg-- +caac--ctcaag------tctgggaagtcacccctgctgcggctgatcaggagggaaagaaagggaagaaca +agaagggccgtgggaaaaagcacacggccttctccagcaaagggctcagtgatgaagagtatgatgagtaca +aaaggataagggaggaacgtgagggcaagtattccatcgaggagtacctccgagaccgggatcgttac---t +acgaggagctggccattgcgcaggcaacagaggagaactttgcagaggatgatgaaatgagacttcgccaaa +ggatctttaggcccactaagaagcagagaagggaagagagagccactcttggcctagtatctggtactgaaa +tcagaaagaggaaggccgacgacttccaacccaaggggaaactctgggccgatgacagccgtgaggtcgact +acaatgagaccatcaactttgaagccccctcgagcatctggtcgcgagtcgtccccttcggcaccggctggg +cgttttgggtgtcac-cgagtctcttaatcaccaccacccacgtcgtgcccagggacacgacagagatcttt +ggtgtgccaatcgcacagatccaagttcataaatcaggtgaattttgccgcctaagattcccccggcctatg +aggaccgatgttagcggcctgattctggaggagggtgccccagagggcactgtttgtaccatccttattaag +agatccagtggggagctcctacccttggcagtgagaatgggaacccacgccaccatgaagattcagggcagg +acaattggtggccagatgggcatgctcctcactggcgctaacgcaaagaacatggacttgggaaccagtcct +ggggattgtggctgtccttacatatacaagaggggtaacgattttgtggttgcgggggtgcacacggccgcc +gcaaggggtggcaacacagtcgtctgcgccactcagggccccgacggtgaggccaccttggagggcggtgaa +aaccacggcacctactgtggtgctccgatcctgggaccagggaaatccccgaaattaagcacaaagaccaaa +ttctggagatcctccacggccccgctcccccctggcacctacgaaccagcctacttgggggggagggatcct +cgcgtggagaacggcccgtcgttacagcaagttatgagggatcaactcaaacctttcaccgcccccagagga +aagccacctaaaccatctatcctagaatctgccaaagataccatagtgaacttcctggaacagacccttgaa +cctgccaaaaagtggagttactcacaagcctgccagtcattggacaaaaccacctctagcggtgacccccat +catgtgaggaagaatgaccattggaacggtgagaccttcacgggccctttggcggatcaggcctcaaaagct +aatctcctctatgaacaaggaaaacacgcccagcccgtttacacggctgccctaaaggatgagcttgtcaag +actgaaaagatttatggcacagtgaaaaagaggctcctttggggttcagatttgggcacaatgattaggtgc +gcgcgtgccttcgggggcttgatggaggagatgaaggaaaattgtatcttactgccaatcagagttgggatg +aacatgaacgaggatggaccagctgtgtttgagaggcatgcgcggcacacctaccactttgatgcagactac +t-cgcgatgggactccacccaacagagaggcatcctggctgccgcgctggacatcatgg-tgaagttttctg +ctgagcccgagtt-ggcccaggtggtggcggaagacctcctcgcccccagtgtcctcgatgttggtgacttc +cgtatttccattgtggagggtcttccctccggagttccgtgcacatcacaatggaattcctttgcccactgg +ttgattactctctgtgccatgtcagaggtaacaggcctctcacccgacgtgatacaggcccattcctgcttt +tccttctacggcgacgatgagatcgtgagcacagacatcaccttggaccccaacatgctcacagagaaatta +aaggaatatggtttgaagccaactagaccagacaagactgaaggacccctagtgattcaaaagaacctgtcg +ggactgactttcctgagaagaacaatagtccgcgacccggccgggtggttcggcaaacttgacaaggactcc +attctgaggcagctctactggaccagaggaccaaaccatgaagaccctatggaaactatggtgccccactca +caaagagcaatacaacttatggccctcctgggtgaagcctcactacacggttctaacttctatggcaaggtg +agtaggatggtgataaatgagatcaaagagggtggtctggagttttacgtgcccagacatgaggccatgttt +cgctggatgcggttttcagacctcagcacgtgggagggcgatcgcaatctggctcccagtggtgtgaatgaa +gatggcgtctagcgacgctgctccatctac---ggatggatctgccggtctcgtaccagaggtcaacaatga +gaccatggctttagaaccagtagtgggtgctcctctcgccgcccccgttgctggccaacataatattataga +cccctggattaaaatgaattttgtacaggcacccaatggagagttcactgtttccccccgcaatgccccagg +tgagattttgttagatttggaacttggccccgatctcaacccttatctttcacatttggcccgcatgtacaa +cggctacgcaggtggcatggaggtgcaagttgtgttagctggcaatgccttcaccgc---tgggaagatcat +ttttgccgccgttccaccgaactttccggcggagaacctcagcgcagcacaagtcaccatgtgtccccatgt +gatagttgatgttagacaattggaaccagttatgctccctatgcctgatatcaggaataagttgtttcatta +caatcaagtggatgac---ccaaagcttaggttgctggcctatctttacacacctcttcgggccaacaatgc +tggggatgatgtctttacagtttcttgtcgggttcttaccaggccaaccccagattttgagtttatgttttt +ggttcctcctactgttgaatctaaaactaagcctttctctttgcctagtcttacccttgatgagctttccaa +ctctagg---tttcctgcacctatagtgcaactgtatacaaacccccatgataatttggttgtccagccaca +gaatggaagatgtaccatagatggtctcctgcagggcaccacgcaacttgtgtcctgcaatgtctgtagtct +caggg-----------------------------------------g---gacccttggtga---------- +----tggtcagcc---ggccag-cca----------------------------------------cagtga +ggaggatatcatg----------------------------------cctatg--------------gcctt +taacgtccagcgagagatcatgctggagaaccttgatggcacaccctatgacccagctgatgacatccctgc +agtactgggttcccccgacttccagggggtcatatttggcatcctcagccaga---gaaacac--------- +--------------------tgatggacaaacc--------agg-----------gcacatgaggccaaagt +ggacaccagggcagctcgatttgcccccaaacttggctttgtcgtggcca------------ctgtggagag +cacagattt---ccacgccaatcaacctagca---------------------------ggttcacccctg- +--------ttgggttgggtggtgacggtgacc------------gagacttcgatcagtggcggttgccagc +ttacggtggtgcg-ctgacg------aacaacaccaaccttgccccacccgtaatgcctgtctatccagggg +agcagcttctcttcttccgctcccaactgcccagc-tccggtggtgtggttg-------------------- +--gtgggtggctggactgcctgctcccccaagagtgggtccaacatttctttcaggagtcagccacttccca +aagtgatgtggctctagtcaggtatataaatcccaccacaggcagggtgctcttcgaggcgaagttgcacaa +acagggttttctcactgtggctgcttcaggttcttatcctctggttgttcccgctgatggttactttaggtt +tgagtcttgggtgaatcaattttatactttggcccccatgggaaatggtagtgggcgcagg---------ag +agccc---------gttaatggctggacaatttttattaggtttagctacagatcttattgggggtgggata +ggttctttgattaatgctgg---tgctaatgctatcaatcagaaggttgaatatgattttaacaaaaag--- +------------------------------ttgcagtcttcttcttttgctcatgataaggaaatgctgcag +gcacaagtagatgcaactagacaactgcagcaggatttgattcagttgaaacaagacactctcctctctgct +ggttaccttcctgctgatgcggctagaggttctcttggtgtgcctatgaccaaggccctggattggaatggc +acgaggtactgggctcccaattctatgggtacctctagttattcggggcgcttttcctctc----------- +-------------------gccctgcctcgaacttaac-------------------------------ctt +tcag-------------------------agcccacagcctcctcgtca----------------------- +---accacctaaaactc------------caactcccccttcagggtccacg------------------ag +tgcctct------------tcggc-----------ctcgtctgcttcaactgtgtc---------------- +-------------------------------------gacgagtcttccta--------------------- +---gttc----c---tcca----------------------caaccccgtcgaggttgtcaagatcctcgac +caccacaga------------------------------------taggaccagagagtgggtgaattcaca +gaac------ttaggcccctatatgg---atggtgccctgcggacggcttttgtgacacccccgtccagcag +gagctct---agtg------------------------------tcggca---cggtctcgaccgtgccaga +ctttgttttgga-ctcatggaccccttcct------------tcaacacaaggagacaaccactctttgcac +acctgcgtaggcggggagagtcacaagcttaacagcttag--t-----------gaaagatagg-------- +-------gtt----------tt------------cttttctt---------ttctttctt------ttct-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN853414.1/1-7556 |Norovirus GII isolate NS15217, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagcgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgatatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctcttaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgacgtctttactgtctcttgtagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaagtcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacggcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK907785.1/1-7497 |Norovirus GII isolate G19_014 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------aaaatcttcaagtgacg---------------gtgtgctttctagcat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacgccagacttggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatactcaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaggaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggctcctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +ataatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacgcca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaaaactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcaccctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggcg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggatcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctactcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatga-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK907786.1/1-7421 |Norovirus GII isolate G19_015 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------------------------------------ctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------gcagcactgcccctcagttaagattgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------caaagtcggaaacagtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacgttcgcgggcatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtgatcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggattagacccgtggttgtcatgatatcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtaggactcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatctagtcaacccggcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggttccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccctggaggatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacgaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtgacctgtgggcagacgataccaggagtgtggact +acaacgagagacttgatttcgaggcgcctccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaagggggttaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcaggttcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacgcatgcatctatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggtaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatctctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaggtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcagttgcacgggacccagctgggtggtttgggaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgccgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---tctcggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacagtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctaactcttggagaactgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +gtattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaattggacaggggcgcaga---------ag +agctc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaacaaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttctgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgca---gc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctct------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907787.1/1-7220 |Norovirus GII isolate G19_016 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------------------------atccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaactgttacccaact +ggaagagagctctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttgtatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtccttgtattg +gagaccagtgtataccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +tcccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgcactctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaagcccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatcactaatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactaggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacggctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagtaaccctatcca +cgacgccctcagactccaagagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggctaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgtgcatcgggactcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcctttaggcagcttgctgctgaaaacaagt +atggccttgtcgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagagctcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgttcaaacaaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacacgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactggtaatgaggagggttgtccaaagcctaaa-- +-agt----gatgagg---agtttgtcatctcctctgatgacatcaaaactgaaggcaagaaaggaaagaata +agaccggccgtggcaaaaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaagatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttccgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgttatcccccaaggcgcacaggagttcttt +ggagtgtccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcctggaagagggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcaaggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaaaagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaagcgagggtgaggccatattagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgctcccaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctaccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagatcaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggggctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatggtacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatataaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagttttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aaaatatcaattaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggttacagacctgtctcctgacattatccaggcaaattcactgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaactgacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcactattgggtgaagctgcgttgcatggcccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataactttgtgcaagcacctggtggtgagttcacagtatcccctaggaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggctcatcttgctaggatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +taatcaggggtctgat---tcgagattgcgcctaattgcaatgttatacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccaccaactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttccagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcacgcttaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggctagccaga---gaaa------------ +-----tc------------ctgataacacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcattagagatttcc------------actgaatc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagatttccaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcaactccttttcttccgctcacaattaccat------cttccggtgggcgg-----tcca---------- +--acggtattctagactgcctggtcccccaagaatgggtgcagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccccgacactggtagagtgttatttgaggccaagctgcacaa +actaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgctcctatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcaggtggcttcaca-aatca--------- +aa-------------ctgtgcgcagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcggtcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatctggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907788.1/1-6826 |Norovirus GII isolate G19_017 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------aaaatcttcaagtgacg---------------gtgtgctttctagcat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacgccagacttggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttaccgcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtctcat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatactcaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggctcctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +ataatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacgcca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgat +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtgccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaagatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcaccctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttgtctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgccgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaa--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907789.1/1-7431 |Norovirus GII isolate G19_019 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------------------------------------------tggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------gcagtactgcccctcagttaagattgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------caaagtcggaaacagtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacgttcgcgggcatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtgatcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggattagacccgtggttgtcatgatatcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtaggactcatcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatctagtcaacccggcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggttccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaggatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacgaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtgacctgtgggcagacgataccaggagtgtggact +acaacgagagacttgatttcgaggcgcctccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaagggggttaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcaggttcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacgcatgcatctatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggtaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatctctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaggtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcagttgcacgggacccagctgggtggtttgggaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgccgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaaggcagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---tctcggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacagtgtcttgcagagttttgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctaactcttggagaactgtccaa +ctccaga---ttccccgctccggtagacatgttgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +gtattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaattggacaggggcgcaga---------ag +agctc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaacaaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttctgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgca---gc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcg----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907790.1/1-7343 |Norovirus GII isolate G19_020 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------------------gaaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gcgtataagg----------tggg---agagggtgtgtctgggctgcccgacctaacaaccgtggcacagcc +tgacgcacaaaacacagcctatagtgttcccccacttagccagagagaggtcggcgaagctaaagaaccgtt +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatat +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttaagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +gccaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacttgtgattg +gacttttgcgggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgtaaggatctaggatcttatgggttggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggccaacgaattagccatggtgagggccattgaggatgcagt +cctggacttggaggcaatagagaacaatcacatgaccacccttctcaaggacaaagacagcctggccacata +catgaggactcttgacttggaagaagaaaaagcaagaaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggcgaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcaagcagacagagacctgttgttgtgatgatatcaggtagaccaggtattggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccagaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaaaggagagagggtggttctgtgggatgattatggcatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgacgccataatcataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ttctagacgcatagatttcctggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggctttgataaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctcttatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccaaggcc +ctgacctgccaaccttcaatttcgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaagtgtcagaaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatgggtgcacctataccatggaatctgatg +gaaggaacaaggttgtggttgaaaaggttcaaaatgcaacagttcaaaccaacaatgaacttgcaggggcac +tccaccacctaagatctgcaaggataagatattatgttaagtgtttccaagaagctatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccgtcgaagagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctaaagacattaaagtggaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagctttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggatagatac---t +atgaagagcttgccattgctaaggccactgaggaagacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggatggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccatgaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaaaccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtccattctcatcaag +aggacaacaggggagctgatgcctctcgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acagtgggtggtcagatgggtatgcttctcactggctcgaatgctaaaagcatggatctaggcacaacacca +ggtgattgtgggtgcccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gctcgtggaggcaatacggtcatatgtgccacacagggaagtgaaggtgaagccactctcgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcttctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtggaagagacccc +cgtgtgaagggaggcccatctctgcaacaggttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaaaccaaatgtcctagaatcagcaaagaggactatcatcaatgttctggaacaaaccattgac +ccccctgaaaagtggtcatatgtccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacggggaaacttgcagaccaggcctcaaaagca +aatctcatgtttgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaactttatggcaagatcaagaaaagactcctgtggggttctgacctatccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aacatgaatgaagatggtcccataatatttgaaaaacactctaggtacagataccactatgatgccgattac +t-cccgctgggactccacacagcagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgacttc +aaaattgccatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctgtctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgactgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgcgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagctgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaagctggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgccccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattaggacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcctaagcccagcccagattacaatgctcccacatat +aatagtagatgttaggactcttgaaccaattatgatcccactacctgatgttaggaatacattcttccatta +taacaaccagcccaac---agccgcatgagattggtggctatgctctataccccccttagatctaatggctc +aggtgatgatgttttcactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacccattctaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------acaatc----------------------------------ctgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgacgtgccagc +cccactgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggc----- +------------aacgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcgacctatagccccaaatttgtccccaaattaggctctgtcaattttaga------------agtaatga +tgatgattt---ccaatt---gcagccgacaa---------------------------gattcacaccag- +--------tgggcatca---atgacgatggta---------accacccgttcagacaatgggaactaccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatctttcgtgccat------gttcaggaggtta------taacc--------- +--aaggcattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctgatcaggtatgtcaaccccgacacgggacgcacactgtttgaagcaaaattgcatag +atctggttatatcactgtggctcattctggagattatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccgtcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgcttcaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccatcggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcggggcaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacccgcaaagcccag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaattaacttctctaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +caagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatttcacatgtcacgccaccctcaagtag +ggcctcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacatctgcat------------ttaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--atg-----atttct-----------tt---------a--aaattt- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MK907791.1/1-6509 |Norovirus GII isolate G19_022 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------attcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggagactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtagtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaatgttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggt +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccctgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggcttttattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcctcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907796.1/1-7557 |Norovirus GII isolate G19_032 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacatcc +ggaagaagccaacacggcgttcagtgtccccccactcagccaaagggaaagcagggacgccaaggagccact +aactgggacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacccgtatacaccccac---agtatctcatctctccagacactcttaggagattacatggagagtcgtt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +attggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctctctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +ggggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggtttcgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaagctgatg +gcaagggtagtgtgaaagttgacagagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctgaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacggccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttaggccaacaaggaaacaacgcaaagaagaaagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacactcgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcgtccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggt +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgaaaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactt +aaggagtatgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccttttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccttcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccaattttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtatgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcttttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaagaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagcctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MK907797.1/1-6976 |Norovirus GII isolate G19_033 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------ctgcacgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacccgtatacaccccac---agtatctcatctctccagacactcttaggagattacatggagagtcgtt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcaaagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +attggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctctctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +ggggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggtttcgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggttgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaagctgatg +gcaagggtagtgtgaaagttgacagagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctgaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacggccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttaggccaacaaggaaacaacgcaaagaagaaagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaagccccaccaagcatctggtcgcggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacactcgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcgtccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggt +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgaaaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactt +aaggagtatgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccttttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagcccctgccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccttcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccaattttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtatgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcttttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaagaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagcctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggga---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907798.1/1-7480 |Norovirus GII isolate G19_034 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgaactctcaactgtcacccaact +ggaagagagctctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacctgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacattctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtcggcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggagaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggcgaaagagtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacccgacttctcacatataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatccggagga--------gactaacaacgaggatggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaaccgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaattagggaagagagaaatggcaggtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgcgaagaagaggaggctaaaatccggcaaa +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcctctcttggtttggttacaggttctgagg +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagtatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagtggccacccttac +cacatgcggaagaacgattgctggaatggggaaactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatgggacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaattgacaacaaaattg +aaggaatacgggctcaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacagtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatgaggacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattactgggtgaagctgcattgcatggtccatcgttctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaataatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgtaacaacttctttcatta +caatcaagggtccgat---tcgagattgcgcctaattgcaatgctatacacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgtccagtgcca +gaatgggcgcgtcacccttgatggtgagttgatgggcaccactcaactcttacctagccaaatctgtgctct +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcactccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagacttccaacaatggactctacccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggccctggttaggtatatcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagaatggtgactctccaataacagtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttctttcaatcatgatagggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK907799.1/1-7390 |Norovirus GII isolate G19_035 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------------------------attcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccattagcctcgctaaggttgagttagcaccactctcattgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcgaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagactcacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacatggaaagggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgctagcctttagacagcttgctgctgaaaataaat +atggattgttggacacaatgagggttgggaaacagctcaaggacgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgattctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccaccgtgcagaccaacaatgagctggttggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaagacccaag-- +-gat----gatgagg---agtttgtcatttcgtccgacgacatcaaaactgagggaaaaaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacgggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggtatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaagggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagttaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaactatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaacttctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggaccacaacatacaatgctggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccttgctcggggttcctct------------------ag +caaatctt-----------ataac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcccctctcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----c--------tcttt- +--------------agt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>MK907800.1/1-7528 |Norovirus GII isolate G19_036 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagagacaaaacaa +atacaaac---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcaggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcagaattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggaacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgagattctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcagaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggaa-ctcacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtgatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgccacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------tcaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK907801.1/1-7536 |Norovirus GII isolate G19_037 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgcagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaac---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgtcaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacctatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggaacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtgttacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctctctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggaa-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtgatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369214.1/1-7591 |Norovirus GII NoV/Hu/JP/2014/GII.P17-GII.17/AO-8 genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aa------------------------------------------------------------ +- +>LC369215.1/1-7576 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-55 genomic RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgctcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatggcaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaa------- +------------------------------------------------------------------------ +- +>LC369216.1/1-7524 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-56 genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatggcaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369217.1/1-7524 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-57 genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369218.1/1-7533 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-58 genomic RNA, nearly complete genome +------------agat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369219.1/1-7562 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-59 genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattgggctggtacctagaaatggtgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgactatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggatacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcatgaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgcgattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctacccctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatccactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>LC369220.1/1-7560 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-60 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttctgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattgggctggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgactatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggatacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcatgaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgcgattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctacccctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatccactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaa-------------- +------------------------------------------------------------------------ +- +>LC369221.1/1-7527 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/GU-69 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttctgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaaggccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaggtac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccattcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369222.1/1-7577 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/HI-78 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a----------------------------------------------------------------------- +- +>LC369224.1/1-7554 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/HI-80 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC369225.1/1-7549 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/HI-82 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------tgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagggaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caattttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcagtgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagaccatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggcgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369227.1/1-7565 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/KA-67 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcatacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctaatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaagttttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaa------------- +------------------------------------------------------------------------ +- +>LC369228.1/1-7618 |Norovirus GII NoV/Hu/JP/2014/GII.P17-GII.17/MI-77 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcatgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa----------------------- +- +>LC369229.1/1-7551 |Norovirus GII NoV/Hu/JP/2014/GII.P17-GII.17/MI-79 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369230.1/1-7551 |Norovirus GII NoV/Hu/JP/2014/GII.P17-GII.17/MI-80 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369231.1/1-7551 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-81 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgccgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaatttcgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagccaactccatatac +tctttctatggtgatgatgagattgtcagcacagacataaaactggacccagaaaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccaatgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagttttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---ctcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369232.1/1-7556 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-83 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtaactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcgacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC369233.1/1-7595 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-84 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaa---------------------------------------------- +- +>LC369234.1/1-7613 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-85 genomic RNA, nearly complete genome +------------agat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa------------------------------ +- +>LC369235.1/1-7587 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-86 genomic RNA, nearly complete genome +------------agat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattgggctggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>LC369236.1/1-7562 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-87 genomic RNA, complete genome +----gtacatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacgccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agtaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>LC369237.1/1-7608 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-88 genomic RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaa-------------------------------------- +- +>LC369238.1/1-7556 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-89 genomic RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaagccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttttatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctggacgcatggacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagcggaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgtgctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtatcactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaagtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctacgcatttaacag-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>LC369239.1/1-7549 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-90 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgacgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>LC369240.1/1-7554 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-91 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>LC369241.1/1-7554 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-92 genomic RNA, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctaccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaattaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggttttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC369242.1/1-7589 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-93 genomic RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaaggctcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggttcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccgg- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaagggggtccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctttagctccttcctcttctcctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaa--------------------------------------------------------- +- +>LC369243.1/1-7551 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/MI-94 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +atcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcactattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaagggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagtgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgactattctcatcaaa +aggacaacaggggagctgatgcctcttgcagttagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagaccag +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggagaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aagatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgatatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccacccggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggtgaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaatccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcctgacacgggacgaacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgagatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>LC369244.1/1-7561 |Norovirus GII NoV/Hu/JP/2016/GII.P17-GII.17/SA-116 genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaagcaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgctaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaagacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacgaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369245.1/1-7555 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-145 genomic RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttggttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtctggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagaaactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgactatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccaggaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaatat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacaaacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--ttg-----atttct-----------tt---------ct-aaattc- +--ggctaat----ttgt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC369246.1/1-7547 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-146 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagagata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaactaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggctgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtattctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggtcgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggatagagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacccagaaatggcgt +cgaccactgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgccctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactaaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaggatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +acgaagagcttgccattgctaaggccactgaggaggatttctgtgaagaggaggaggtcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaagctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgagaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaaatggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaggacctgaat +gggttgaccttcctccgccgaacaatcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atccttaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccaggaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctacaccccactcagatctaatggctc +aggtgatgatgtcttcactgtctcttgcagggttttgactaggcctactcctgattttgagttcacctattt +agtgccaccttctgttgaatctaagactaaacctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgacgacgatgatg---------gccactcgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------taacc--------- +--aaggcattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaagttgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaagt---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcccag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369247.1/1-7547 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-148 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggagactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtggttagtgaggacttgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggcgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatggcaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctaactccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369248.1/1-7547 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-149 genomic RNA, nearly complete genome +---------------------cgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---ggagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369249.1/1-7549 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-150 genomic RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttaggccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctcttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369251.1/1-7539 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-164 genomic RNA, nearly complete genome +----------------------gtctgac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgccgcaataagcctcgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcctc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaattaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaaacttagaccactgaacattctcaatgtactggcaacttgtgactg +gacttttgcaggcatagtggagtccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagactattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgcctttagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtagttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaaa +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaagttgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattttgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggggcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtggaagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacactt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccaacctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggcgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttgga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaacctcgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taatc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgcacactgtttgaagcaaaattgcacag +atctggctacattactgtggctcactctggagactatcctcttgttgttccggctaatggatattttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggt +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctccagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagttc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--gg-taat----ttgt---atcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC369252.1/1-7545 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-165 genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaatagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +cagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccaccgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaagttttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>LC369253.1/1-7546 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-172 genomic RNA, nearly complete genome +----------------------gtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttaatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgagaaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaatcttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC369254.1/1-7547 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/TO-144 genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttaggccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcttggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctcttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC369255.1/1-7588 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/TO-146 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaa----------------------------------------------------- +- +>LC369256.1/1-7555 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/TO-147 genomic RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattgggctggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgactatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggatacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcatgaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccaagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatcctttacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgcgattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctacccctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------tcgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacaagtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>LC369257.1/1-7590 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/TO-148 genomic RNA, nearly complete genome +---------ggaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctattg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctaaacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgagccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccttga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccaccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgtcaaatgtttccaagaagccatttactctctactcc +aaattgctggcgcagccttcgtcacctcacgcattgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggaacggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtattagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgactac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacttcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-ctaacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacaccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>LC369258.1/1-7484 |Norovirus GII NoV/Hu/JP/2015/GII.P17-GII.17/SA-169 genomic RNA, nearly complete genome +------------------------------------------------------------------------ +--------c----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggaggtcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaaggagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctggaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataacgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---ggaatgtgggt----- +------------aatgatgcgcctggttcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggc------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MN525275.1/1-7544 |Norovirus GII isolate JH28 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcgtt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcttatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctactcggggactacgagcttcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtcaacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggcccgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtactgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttacattaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgtcttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgagtctgatg +gcaagagcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatggtcttggaagaaggtgcgcctgaaggcaccgtggtaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaggtgagggtgaggcaactcttgagggcggagat +gacaaaggaacatactgtggggcacccattctaggccctgggagcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgacaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggggacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacatcaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagacttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattagtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttatatacaccactcagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcaatacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcgacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctctagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttct-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN525276.1/1-7576 |Norovirus GII isolate JH29, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcgtt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgctttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gccaaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagtttcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtcaacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggcccgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtactgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttacattaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggtctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggagtgtgaccatcaagaggtgtcggatcatctacggtggctccacgtatgaccttgagtctgatg +gcaagagcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatggtcttggaagaaggtgcgcctgaaggcaccgtggtaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccatcatctgcgccacacagggaagtgagggtgaggcaactcttgagggcggagat +gataaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccgcaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgataccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggggacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacatcaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagacttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattagtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttatatacaccactcagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agtttaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcaatacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcgattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------acgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctctagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaa---------------- +------------------------------------------------------------------------ +- +>MN493873.1/1-7530 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/CA-RGDS-1075 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgcttgctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccaccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggatcaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggagctttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctagattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK733205.1/1-7308 |Norovirus GII isolate Hu/AR/2018/GII.27[PNA9]/Arg15813 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------------------------ccc +cccaatacctc--------------------ccccaccacctaatgg------ggaggacattgtcgtcacg +tacacaaaac----------aaga---tgacaaaatcagtggagttcccaccgtctccaccgttgaaaactc +tcccttgcatgacaccgcatacagtgttccacccttggaccaaagggaaaaggttgatgcaaaggagcccct +gacgggttcaatactcgaaatgtgggatggtgagatttaccactatgggctttatgtggaaaggggtctgat +tctcggcgtgcacaagccaccatctgctctgagcatggcacgcattgagttgacccccctttccctctattg +gagggtggtgtataccccgc---cctaccttgttgccccagacaccctcaggaaactccatggggaatcctt +cccctacacagcatttgacaataactgttacatgttctgctgttgggtcctggatcttaacgattcgtggct +caa---caggaagttcgtgtcaaggactacaggattctacagaccctaccaggactggaacaggaagcccct +gcccaccatggatgaaggcaaactcaagaaggtagccaatgtactactgtgtggtctatccagcctcttcac +caggcccattaaagacctcataagtaggctgaaaccactaaacattctcaacattgtatccaattgtgattg +gacattccccggtgttgtagaggcccttatcctgcttgcagaactcttt---ggtatcttctggaccccacc +agacatatctgctttcgtcgcttccctgttgggagactacgaaatgcagggtcctgaggacattgcaaccga +gatcgtgccagtcgtccttggtggcattggtatggtccttggtttcaccaaggagaagattggccgactact +cagctcggctgcgtcatcactacgggcgtgtagggagattggcaactacgggatagaggtggtcaaattaat +aatgaaatggttcttccccaccaaaaatgaagtgaacgagatggaaatggtcagggcgatagaggatgcagt +gcttgactttgaggcaatagaaaacaatcacatgacagctctactcaaggacaagaatagtttggccacctt +tcttagagccctagacatggaggaggagaaggcgcgaaaactgtcaaccaaatccgcatctccagacatagt +cggcaccataaatgccattctagccaggatagctgctgctaggtccctagtccacagagccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatttcgggccgacctggaatagggaagacacatctagcccg +ggacttagccaagaggatggcgtccacactctcgggagaccagagagtgggccttgtaccaagaaacggcgt +cgaccactgggatgcctacaaaggtgagagaatcgtcctttgggatgattatggcatgagtaaccccgtggc +ggacgctctgcgcctccaggagcttgccgacacctgccctttgacactcaactgtgataggatagagaacaa +ggggaaggtgtttgacagtgataccataatcataaccaccaacttgtcaaaccccgccccacttgactatgt +gaactttgaggcctg-ttcacgccgcattgacttccttgtttatgcggactctccttcagttgacaaggcaa +agaaagacttccccggccaaccagacatgtggaaagatgcattcaaacctgacttctcgcacataaaattac +aattggcaccgcagggaggattcgacaagaacgggaacaccccacatggcaagggagtgatgaagaccctga +ctacgcattccctcatagccagggccaccggcttgctgcatgaaagattggatgaattcgatttacagggga +cagagctaccaatgtacaactttgaccaaaacaaagtggccgcattcaggaggctagcggccgacaacaagt +acggcctaatggaaaccttaaaggcgggcaacaagttgaaggaggtcaagaccctagaacacttcaaggagg +ctgtcaaggacatccgcataaaaccatgcaggataatctacaattccaccgcttacgaattggagtcaagcg +gtactgggagagtcatcgtcaagaaagtgggtgaccagaaggtgcaggccaataatgaactctactctgccc +tcaacaatctgcgcagagctaggatcaggtactacatcaagtgtttccaggagatgatctacacactcctcc +aaatcgctggtgcggcttttgtaacatcaagaatgacacagaggatga------acattggaagactgtggg +ccaaaccgga------------aaagca--------aatggaaacctctgtggagccccccccccctcct-- +--------attgaag---actggaccataagcccaactgacacagtccaggaaggcaagaagggcaaaaaca +agagcggtagaggcaagaaacatactgccttctctagtaaaggtctcagtgatgaagagtacgacgagtaca +aaaggatcagagaggagcgccaggggaaatactctatagaggagtatctccaggacagagaccggtac---t +atgaagaattggccatagcccaagcaacagaagaaaatttctgtgaggaggaagagatcaaaataagacaaa +ggattttcaggccaaccaggaaacaacgcagagaagagagggccaatctgggcctggtcacagggagtgaaa +ttaggaagaggaaccctgacgacttcaagccaagaggaaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagaaaatagactttgaggcccctcccagtctgtggtccagaatagtcaactttggctcggggtggg +gtttctgggtctcgt-ccaacctattcatcacatcaacgcatgttgtgccaccaaacatcacggaagctttt +ggggtcccaataagccaaatccaagtccacaggagcggagagttctgcaaaatgaggttccccaaggccatc +aggcctgatgtttctgggatgattcttgaagaaggtgcgccagaggggacggttgtaaccatactgatcaaa +aggacaaccggtgagctcatgccattagcatcccgcatgggcacccatgccaccatgaaaatacagggaaga +atgattggtggccaaatgggaatgctcctcacagggtccaacgccaaaaacatggaccttggcaccatccca +ggggactgtggctgcccctatgtctacaagaggggcaatgagtgggttgtgatcggggtacacaccgctgcg +gccagagggggcaacacggtgatatgtgcaacacaagggcccgaaggtgaggccacacttgaaggaggagat +aaccatggaacctactgtggtgcaccaatcttgggaccaggaaatgcaccaaaactcagcaccaaaaccaaa +ttttggagatcctccaatgccccacttccccctggcacatatgagcctgcctacctcggtgggagggatcct +agagtcaagggtggcccatcactacagcaagtcatgagagaacaactcaagccattcactgccccgcgcggg +aagccacctaggccggcaatcttggaagctgcaaaggagaccatctgcaacgtgctcgagcaaaccatcgaa +ccacctcaaaaatggtcttacgcgcaagcctgcgcctccctggacaagaccacgtcaagtggctacccccat +cataagaaaaagaatgacaactggaatggtgaatcttttactggtgttttggccgatcaggcatcaaaagca +aacctcatgtttgaacagggaaaacacatgcaacccgtgtacacagctgcactcaaggatgagcttgtaaag +actagtaagatatatgataagatcaagaagaggctcttgtggggctctgacctgggcacgatgattcgctgc +gcaaggtcgtttgggggcctgatggatgagatgaaagctaactgtgtgagattgcctatcagagttgggatg +aacatgaatgaggatggacccataatctttgagaaacattcaagatacaggtaccattatgatgctgactac +t-ccaggtgggactcgacccagcaaaggcacgtgttgggtcttgcacttgaaatcatgg-ttaggttttcag +ccgaacctgaatt-ggcacaaatagtggctgaggaccttttgtcacccagtgtcgtggacgttggtgacttc +aaaattacaataaacgagggattgccctctggtgttccatgcacatcacaatggaactcaattgcccactgg +ctgttaacattgtgtgccatgtcggaggtctcaggactctcgccagatgtggtgcagtcaaattcgtgcttc +tccttttatggagacgacgagatagtcagcacagacataaaattggacccacaaaaactgacagacaagctg +aaagaatatggactgatcccaacccggcccgacaagacagaggggccactcataatcaaagagagcttagaa +ggcctgacatttctaagaaggaacatttgcagggacccggttggatggtatggtcaacttgaccagtcatca +atcatgaggcagttgtattggacaaaaggacccaaccatgaagaccccaacgaaacaatgatcccacactcc +caaagaccagtgcagttaatgtctctccttggtgaagcttccctacacggccctgctttttacaagaaagtt +agcaaattggtcatcactgaattgagggaaggggggatggatttctatgtgcccagacaagaaccaatgttc +agatggatgagattctctgacctgagcacgtgggagggcgatcgcaatcttgctcctgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtagctggaggagcaattgctgcccctctaactggacaaacaaatttcattga +tccctggattagaaataattatgtgcaggcacctaatggtgaatttacagtttctcccagaaattcccctgg +tgaaattttgctcaatttggaattgggtcccgagctcaaccctttcttggcccatttgtctaggatgtataa +tggttttgctggtggcattgaggttcaggtcatcatggcgggcaacgccttcaccgc---tggtaagatcat +ctttgcagcagtgcctcccaattttcccacagaaaatcttagccctccacaaatcaccatgtttccccacgt +cataatagatgtgagaaccctcgagcctgtcaacattcccttgcctgatgttagaaacaacttcttccatta +tagccaaaataatgag---ccccgcatgagattgttagcaatgttgtataccccactcagatcaaatggttc +tgcagaagatgtttttactgtgtcgtgtagggtcctcaccaaaccctcaccagattttgaattcaactactt +ggtccccccaactgtcgagtctaggacaaagcccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgtggccattgatttcctgcacaccagccccaccgagaacatcgttgttcagccgca +aaacggcaggtgcacgctggatggtgaactgctgggcaccactcaattggtcacttctaacatctgtgcctt +cagag-----------------------------------------ggtccatctcag-------------- +------------gacatgagaa--------------------------------------------ca---- +----caggagata----------------------------------accaccaa----------------- +----------tggcattttaatatcaccaaccccaatggcactccgtttgaccccacagaggatgtgcctgc +tccacttggaaccccagatttcacaggccagctctatggagtcatttctcaac---ggaacagggaggggac +ttctggt-----gaaaacaaccagaaggccaac--------agg-----------tcccatgagggagtgat +ctcaacactcgcaccaagatttacaccaaagctggggtcggtcatgattggca---------catggaccac +cgatgacat---tga---aaaccaaccctcca---------------------------gattcgctccaa- +--------ttggc------ttaaatgatgatg------------acaattataaccagtggcaattgccaaa +ctactccggggca-ctcact------ctcaacatggggttggcctcgtctgttttccctacttaccctggtg +aacagcttcttttcttccgctcatacatcccaa------tgaaggggggata------tggta--------- +--gcccattcatcgactgccttataccccaagagtgggtctcccatttctatcaagaatcagcaccctcaca +gacagatgtggctctgatcaggtatgtcaaccccgacacaggacgcgtcctgttcgaggccaaattacacag +acaaggatacatcaccgtcgccaagaccggtgacagccccatcaatgtacctgctaatggttatttcagatt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggcaggagcttttatagcaggattggctggtgacatgttaacaaacactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcatttgcccatgataaggaaatgttacaa +gcacaagttgaggccacaaagaaactgcaggccgaaatgattgccatcaaacaaggggttttgaccgcaggc +ggcttttccccttctgatgcggcccgtggggcaattaacgcccctatgacaaaagtcttagattggaatggg +acaagatactgggcccccaacgccacctctacaacctccatgtcaggtggcttcacgggt------------ +ca-----------aaccgtgcacaggcccacaccaaat---------------------------------t +tcaaaac----------------gaaccaggcacccaaatctatg--------------------------- +-------------------------------------------------ccc---------------agtag +tggatcct-----------cagta------------aggtcaaacacgacccaactttctagt--------- +----------ctgagt-------tcacattc------ctctgggtcttcccgatccagcgggtccacaactg +tcagctccc------tac--------------------------------cat------------------c +atccag---------------------------------------taggactagggactgggttaatcagca +aaatctcaatttggcaccacatatgc---ctggatccctcagaacagcttttgtcactccaccatctagcag +ggcctcc---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcgt------------ttaatacacgcagacagccgctgtttgcac +accttcggagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattagt------ +-tta-a-gtt-tgat------------------------------------ttaa-tt------tggattta +a------------aa--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MN453358.1/1-7530 |Norovirus GII isolate Hu/PE/2011/GII.23[P23]/Loreto5841, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggcacaaccagcacaaacagt +gaaattcac----aacaaagatggaaatacaacatcaaac------------------ctatttgccaacat +gactgttggcataaagaagg----ctctaggggcgagatcaaaacagtccgcccctggagcccaaacaacta +acaagaatgggaga-----------------------------------------------accaccatccc +tcccatacccc--------------------ccccacccccaaatgg------tgaggacatagtcatcaag +tataccaaac----------aaga---ggatacagtcagtggagtgcccaccgtctccactgcagacatatc +cccattgcatgacaccgcatatagtgtcccccccttggaccagagggaaaaggtggacgcaaaagaacccct +aactgggtcaatacttgagatgtgggatggtgagatctaccattacgggctctatgtggagagagggcaagt +cctcggtgtgcacaaaccaccagctgctgtgagcattgcacgcatcgagctgacccccctctctctatactg +gagaacagtttacacacctc---cctacctggtagctcctgacacccttaagaagctccatggtgagacatt +cccctacgcagcatttgataacaactgctactcattttgttgttgggttctggacctgaacgactcgtggct +caa---tagaaaattcgtgtcaaggaccacaggcttctacagaccctaccaggagtggaacaggaaaccatt +gccaaccatggacgaaggaaagcttaagaaggtggccaacgtcttcctgtgtggcttgtctgggcttttcac +caggcccatcaaagatctcataggcaaactgaaaccactgaacattcttaacattgtcaccaattgtgattg +gacgttcccgggagtcgtagaggcggtcatcctcctcgcagagctcttt---gggatcttctggacaccacc +agacatatctgccttcgtcgcctctctgttaggtgactatgagatgcaaggccccgaggacattgcgaccga +aatagtcccagtcattctaggtggtattggcatggtacttggtttcactaaagagaagatcggccggttgct +gagttccgcggcatcatcactcagggcctgcagggaaatcggcaactatgggatagaggtggtaaaattggt +gatgaaatggttctttccaaccaaaagtgaggtcaatgagatggaaatggtcagaacaatagaggacgcagt +gctcgactttgaggcaattgaaaacaatcacatgacagctctactcaaagacaaaaatagtctggccacctt +cctcagggcactggatgtggaagaagagaaagcgcggagattatcaaccaaatccgcgtcccccgacataat +cggcactataaatgcactcctggcgagaattgccgctgctaggtcactggtgcacagggctaaggaagagat +gtcatcaaggatgcgtcctgttgtcatcatgatatccggacgacctgggatagggaaaacccatctggcccg +cgacctagctaagaagatggcggccactctgtcaggtgaccagagagtgggcctggtcccaaggaatggtgt +tgaccattgggatgcatacaagggagaaaggatcgtcctgtgggatgattacggtatgagcaaccccgtgac +agacgccctccgactccaggaactcgccgatacatgccccctgacactcaactgtgataggatagagaataa +aggaaaggtctttgacagtgacaccataatcatcactactaacctggccaacccggcccccctggactatgt +gaactttgaagcttg-ctcacgccgcatagatttcctcgtttatgcggactctccttcagttgataaggcaa +agagagacttcccaggccaaccagacatgtggaaagacgccttcaaaccagatttctcacacataaagctac +aactggcaccacagggaggatttgacaagaatgggaacaccccacatgggaagggcgtcatgaaaacactaa +ccccacactccctcatagcccgtgccactggtttactccatgagagattagatgaatttgacttacagggtc +aagaattgccagtctacaactttgaccagaacaaggtggccgctttccggaaactagcggccgacaacaagt +atggtctcatggacactttgagggcaggcaacaaactgaaggaggttaagagtctagaccaattcaaggaag +cggtgaaagacatccgcataaagccttgcaggataatctacaactcaatggcttatgacctggattcaaatg +ggtcaggcagagtcaatgttaagaaagtgggagaccaaaaggtccaggccaacaatgaactcaactccgcac +tcaacaaactgcgcggggctagaatcagatactatgtgaagtgcttccaggaaatggtctactccctcctcc +agattgctggtgcggccttcgttacatcaagaatagcacaaagaatga------atgtcaacaagctgtgga +caaaaccaga------------aaaaca--------acaggaggcctctgcagggccccccaccccccca-- +--------actgaag---agtggaccataacaccaatggacacgatccaggaaggtaagaagggcaagaaca +aaagtggtaggggtaagaaacacactgcattctctagtaagggccttagtgatgaggagtatgatgagtaca +agagaatcagggaggagcgccaagggaagtactccatagaagaatacctccaggacagggaccggtac---t +atgaagaattggccatagccaaagcaacagaggaggacttctgtgaagaggaggagatcaagataaggcaaa +gaattttccgcccaaccaggaaacagcgtagggaggagagagccactctaggccttgtcacaggcagtgaaa +ttagaaagaggaaccccgatgatttcaaaccaaaaggaaaactgtgggctgatgatgaccgtagtgtcaact +acaatgaaaggatagactttgaagctcctcccagcctctggtccagaatagtcaacttcggttcgggttggg +gcttctgggtctcat-caaatttgttcatcacctccacacacgtcatcccacaaaacatgtctgaagctttc +ggagtgccaataagccagatccaaatacataggagtggagagttctgcaaaatgaggttcccaaaggccatc +aggcccgatgtctctggcatgattcttgaggaaggcgcgcctgaaggcacggtggtgaccatattgatcaaa +agaccaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaaatacaggggagg +atgattggaggtcaaatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtgcct +ggtgactgtggctgcccttatgtctacaaaagaggcaatgattgggtagttatcggggtgcacaccgccgcc +gccaggggtggcaacacggtgatctgtgccactcaggggccagatggtgaagccacacttgagggtggcgac +aaccatggaacctattgtggcgcgccaatattaggacctggaaacgccccgaaactcagcaccaagaccaaa +ttctggaggtcctccaacactccgcttccccctggcacttacgaaccagcctacctcggtggtaaggaccca +agggtcaagggcggcccatcactacaacaagtcatgagagagcaactcaagcccttcactgccccacgtgga +aaaccaccaaggccagcggttttggaggccgccaaggaaaccatctgcaatgtgctggagcaaaccattgaa +ccgccccaaaagtggtcctatgcacaggcttgtgcttccctagacaaaacaacctcaagtggccacccccac +cacaagaagaaaaatgacaattggaacggggaatccttcattggtgttctggctgatcaggcttcaagagca +aacctcatgtatgagcaagggaaacacatgcagcctgtgtacacaggcgcgctcaaagatgagcttgtcaaa +accagcaagatctatgaaaccattaagaagagactcttgtggggttcagacctcggcacaatgatacgctgt +gccaggtcatttggtggtctcatggatgaaatgaaggcaaactgtgtgaacctaccagtcagagttggcatg +aatatgaatgaagatggtcccataatctttgaaaagcattcaaagtacagatatcactatgatgctgactat +t-ccaggtgggactcaacacaacagagatgtgtcctgggtgctgcacttgatataatgg-ttagatactcag +ccgaaccagaact-ggcacaaatcgtggctgaggacttgctgtcgcctagcgtcatggacgttggcgacttt +aaaatcaccataaatgagggcttaccatcgggagtcccgtgcacatcccagtggaactcaatagctcattgg +ctgttaacactctgtgccatgtcagaagtctcaggactgtcaccagatgtggtacagtcaaattcatgcttc +tccttctatggggatgatgaaatagtcagcactgacatcaaattggacccccaaaaactgactgacaagttg +agagagtatggcttaattccaactaggcccgacaaaacagaaggaccacttataatcagagagagtctagaa +ggcctaacattcttaaggagggatgtgtgcagagacccagcagggtggtatggcaaacttgaccaatcatca +atcatgagacagttatactggacaaaaggacccaaccatgaggaccccaatgaaacaatgatcccacattcc +cagaggccagtgcaattgatgtccctgcttggtgaggcggccctacacggaccgacattctacaagagagtt +agcaagttggtcatcactgaattaaaggaaggtggaatggatttctatgtgcccagacaagaacctatgttt +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtggcaggaggagcaattgcagccccactaactggacaaacaaatttcattga +tccctggattagaggtaattatgtgcaagcaccaaatggtgaatttacagtgtcccccagaaattcgcccgg +tgaaattttgcttaatttagaattaggccctgaactcaacccattcttgtcccatctatctagaatgtacaa +tgggtatgctggcggtattgatgtccaagtcatcatggcaggcaatgccttcaccgc---tggtaagatcat +ctttgcagcaatacctccccatttccccgtggaaaatcttagtccccctcagatcactatgttccctcatat +tatagtggatgtcaggacccttgaacccataaatatccctgtaccagatgttaggaacaacttcttccatta +taatcaaaacaatgag---tctcgcatgagactggtggccatgttgtatacccctcttaggtctaacgggtc +tgctgaagatgttttcacagtgtcatgtagggtcttaacaaaaccatctgcagactttgaatttaattatct +agtccccccaactgtagagtcaaggactaaacccttcacaataccaatactcacaattggggaaatgacaaa +ttcaaga---ttcccagtgcctattgacatgctccatactagtccaacagaaaacattgttgttcaaccaca +aaatggcaggtgcaccatagatggtgagttgcttggcaccactcaactgatcacttccaatatctgttcatt +cagag-----------------------------------------gatccatctcag-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgacg----------------------------------aacacctg----------------- +----------tggcacttcaacatcacaaaccccaatggcactccatttgaccccactgaagatgtgcctgc +ccccctcggaaccccagatttcaggggtcaattgtacggtgtcatctcccagc---gagacagagagggaac +accctcg-----gcgaacaatcagaaggcaaac--------agg-----------tcccaccagggagtgat +ttcaacaatctcaccaaaatttgtccctaagttaggttcagtcatgattggca---------catggactac +tgatgatat---caa---gaaccagccatcca---------------------------agttcgccccaa- +--------ttggc------ctcaatgatgatg------------ataattttaaacaatgggaactgccaaa +ttattctggggcg-ctcacc------ctcaacatggggttggcacctagtgttttccccacctatcctggtg +aacaaatccttttcttccgctcctatctgccaa------tgaagggagggta------cggta--------- +--gtccatttattgactgcctagtacctcaagaatgggtcgctcacttctaccaggagtcagcacccgcaca +aacagatgtggccctaatcaggtatgtaaaccccgaaacaggacgtgtccttttcgaggccaaattgcacag +acaggggttcattaccgtttccaagagcggcgacagccccatcaatgtgcctgccaatggttattttaggtt +tgattcttgggttaatcagttttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacaccgta +gggtctctagttaatgcagg---agctaatgctattaatcagaaaattgattttgagaataataaatat--- +------------------------------ttccaaaatgcatcatttgcccatgataaggatatgctgaat +gcacaggttgaggcgaccaagaaacttcaggctgacatgattgccatcaagcaaggggtattagtcgcgggc +ggcttttcccctactgatgcagctcggggagcaatcaacgcccccatgacaagagctctagattggaatgga +acaaggtactgggcgccaaatgccacctccaccacttcaatgtcaggtggcttcacagga------------ +ca-----------ggtttcgcacaggaccacaccaaat---------------------------------t +ttaaaac----------------caaccaggcccccaagccccca--------------------------- +-------------------------------------------------cct---------------agtag +tgggtctt-----------cagta------------agatccaactcaacccaactcactagt--------- +----------ctgagc-------tcccactc------ctctgggtcatcccgatccagcggatcaacaatgg +ttagctctt------tgc--------------------------------ctt------------------c +ttctag---------------------------------------caggactagggattgggtcaatcaaca +aaatcttaatttggaaccacacttgc---ctgggtctctcagaacagcttttgtcactccaccatctagttc +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +gggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctttttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattatt------ +-tta-a-att-tgat------------------------------------ttaa-tt------tgaatttg +a------------ttgg---catcttttaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MN453359.1/1-7523 |Norovirus GII isolate Hu/PE/2013/GII.24[P24]/Loreto7940, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgcgaccgctggtacaaccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcaaac------------------atatttgccaacat +gactgttggtataaaaaggg----ctctgggggcgagatcaaagcaactcgcccctggagccacaccaaaca +acaaaattgggaaa-----------------------------------------------accatcatccc +ccctgtgcccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tataccaaac----------aaga---ggacacggtcagtggggtgcctagcgtctccaccgtagacatatc +ccctccacatgacactgcatacagtgtcccccccctggaccaaagggagaaggtggatgcaaaagagcccct +gactggttcaataatagagatgtgggacggtgagatctatcattatgggctctacgtagagaaggggctagt +tcttggcgtgcacaaacccccagctgccatgagcattgcgcgcatcgagctaacccctctctctctgtactg +gagaacagtatacacacccc---cttacctggttgcccctgacacccttaggaaactccatggtgaaacctt +tccctatacagcatttgacaacaattgttactcattctgttgctgggttttggacctgaacgattcctggct +caa---cagaaagtttgtgtctcgaaccacgggcttctacagaccctaccaagattggaacagaaaaccaat +gccaaccatggacgagggaaaactcaagaaagtggccaatgtgttcctgtgcggcctgactgggctgttcac +caggcccatcaaagacattataggtaagttgaagccgctgaatttccttaacatcgttgccaactgcgactg +gaccttccctggcgttgtggaagcaataattctcctctcagaacttttt---ggcatcttttggacaccacc +agatatatctgctttcgttgcctccttactaggtgactacgaaatgcaaggccctgaagacatcgcaaccga +gatcgttccagtcatcctcggcggtattggtatggttctaggcttcaccaaagagaaaattggccgactgct +gggctctgcggcatcatcccttagagcatgcagagagatcggcaactatgggatagaggtggtgaaactggt +aatgaagtggttcttcccgaccaaaagtgaggttaatgagatggaaatggtcagaacaatagaggatgcagt +gcttgactttgaggcgatagagaacaaccacatgacagctttactcaaagacaagaacagtctggccacctt +tctcagagcactagacatggaagaggaaaaggcgcggaaactgtcgaccaaatccgcctcacctgacatagt +cggcaccataaacgcactcttggcgagaatcgccgctgccagatccctagttcacagggccaaggaagagat +gtcatctaggatgcgtccagtcgtcatcatgatttctgggcgacctgggattgggaaaacacacctggcacg +cgacctggccaaaaagatggcggccaccttatcgggtgaccagagagtgggccttgtcccaagaaacggtgt +cgatcactgggatgcatacaaaggggagaggatcgtcctctgggatgattatggcatgagtaaccctgtggc +agatgctctccggctccaggaactcgccgacacctgccccttgacactcaactgtgacaggatagagaacaa +agggaaggtctttgacagtgacaccctgatcatcaccaccaatctggccaatccagctcctctcgactatgt +aaactttgaggcttg-ttcacgccgcatagacttccttgtctacgcggattccccctcagttgacaaagcaa +aaagagatttcccgggccaaccggacatgtggaaggacgccttcaagtcagatttctcacacataaagctac +aattagcaccacaaggaggatttgacaagaatggaaacacccctcatgggaagggcgtcatgaaaacactga +ccacacactccctcatagcacgcgccactggcttgcttcatgagaggttggatgaatttgacctgcaaggtc +cagagctaccagtgtacaattttgatcaaaacaaggtggccgcgttccgaaaactcgcagctgacaacaagt +atggtttcatggacaccttgagagcaggtaacaaattgaaggaagtcaaaaccctggaccagtttaaagaag +cagtgaaggacatacgcataaaaccctgcaggataatttacaactcactagcctatgatttggattcaaatg +ggtcaggaaaggtcaatgtcaaaaaggtgggggaccaacgaatccaggccaacaatgagctcaactctgcac +tcaacaaactgcgcggggccagaatcagatactatgtgaaatgtttccaagaaatgatctactcacttctcc +aaattgctggtgcggccttcgtcacgtctagaatggcgcagaggatga------atgtcaacaaactgtggg +ccaagccaga------------aaaaca--------gtcagagaccctcacggaaccacctacccctcca-- +--------attgaag---attggaccataacaccagcagacacagtccaagagggtaagaaaggtaaaaaca +agagtggcaggggcaagaagcacactgcgttctccagcaagggcctcagtgatgaggagtatgatgaataca +aaaggatcagggaagaacgtcaaggaaagtactctatagaggaatacctccaagacagggaccggtac---t +atgaagaattggctatagccaaagcaacagaagagaatttctgtgaagaggaagaaatcaaaatcaggcaga +ggatcttccgcccaaccaggaagcaacgtaaggaggagagggccaccctaggtcttgttacaggtagtgaga +taaggaagaggaaccccgatgacttcaagccaaaaggcaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagagaatagactttgaagccccccctagtctttggtccaggatagtcaacttcggttcaggatggg +gtttttgggtctcct-ctaacctgttcatcacttccacacatgtcatcccacaaaacatgtctgaagccttt +ggagtgccaataaatcagatacaaatacacaggagtggggaattctgcaaaatgagattcccgaaagccatc +agacccgacgtttctggcatgatccttgaggagggtgcccctgaagggacagttgtgaccatattgatcaaa +agaacaactggtgaactcatgccattagcagcccgcatgggcacccacgccaccatgaagatacaaggtaga +atgattggaggccagatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtccct +ggtgactgtggctgtccctatgtctacaagaggggcaatgactgggtcgtcattggggtacacaccgccgcc +gctagaggcggcaacacagtgatctgtgccacccaggggccagatggtgaagccaccctcgagggaggtgac +aaccatgggacgtactgtggtgcacccatactagggcctggaaacgccccaaaactcagtaccaagaccaaa +ttttggagatcatccaacaccccacttccccctggcacatacgaacctgcctacctcggaggtaaagaccca +agggtcaaaggtggcccgtcactacaacaagtcatgagggaacagcttaagcccttcacagccccaagagga +aaaccgccaagaccagcgatcttggaggccgcaaaggaaaccatctgtaatgtactagaacagaccattgaa +ccaccccaaaagtggtcctacgcgcaagcctgcgcgtccctagacaagacaacttcaagcggacacccacac +cataaaaagaaaaatgacaattggaatggtgaatctttcactggtgttctggctgatcaggcgtcaaaggcc +aacctcatgtttgagcagggaaaacacatgcaacctgtgtacacaggagccctcaaagatgaacttgtcaaa +accagcaaaatctatgagaacattaagaagaggcttttatggggatcagacttgggcacgatgatacgctgt +gctagatcatttggtggtctcatggacgagatgaaggcaaactgtgtgaggttaccagtcagggttggtatg +aacatgaatgaggatgggcccataatctttgagaaacattcaaaatacagataccattatgatgctgactat +t-ctaggtgggactcaacacaacagagatatgtcttaggtgctgcccttgaaataatgg-ttaggttctcag +ccgagccagaatt-ggcacaaattgtggctgaagatctcttgtcgcccagcgtcatggacgtcggtgacttc +aaaattactataaatgaaggcttgccctctggggtcccatgcacgtcccagtggaattcaattgctcattgg +ttgttgacattatgtgccatggcagaggtctcaggattgtcaccagatgtgatacagtcaaattcctgcttc +tccttttacggagacgatgagatagtcagcacagatatcaaattggaccctcaaaaattaacagacaagcta +aaagagtacggcttgatcccaaccagacctgacaagacagaaggccctctgataatcaaagaaagtttggag +ggtttaacctttctgagaagagatgtgtgtagagatccagttgggtggtttggtaaacttgatcagtcttca +atcatgagacaactgtattggactaaaggacccaatcatgaagaccctagtgaaacaatgataccacattcc +cagaggcctgtgcagctgatgtccctactaggtgaagcagccctacatggaccagctttctacaaaaaggtc +agcaaattggttatcactgaactcaaagaaggtggaatggatttctatgtgcccaggcaagagcctatgttt +agatggatgaggttctccgatctgagcacgtgggagggtgatcgcaatctagctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccaacctcgtaccagaggccaacaaaga +ggttatggcattggaaccagtggcgggcggggcaatcgccgcacccctcactggtcaaacaaatataattga +cccctggatcatgaataattttgtgcaagcaccaaatggtgaatttacaatatctcccagaaattccccagg +agaagtgttgttaaatctagagttaggaccagacctcaaccctttccttgcccatttgtctagaatgtataa +tggatatgcggggggagtggaggtgcaagtgattatggctggcaacgctttcaccgc---gggaaaagtcat +cttcgcagctgtaccaccgcacttcccagttgacaacctcagcccccctcaggtgactatgtttccacatgt +tatagttgatgttaggacctttgagccaatcctacttccccttccagatgtgagaaatagcttctatcatta +taatcaggtgaatgat---tcaaggatgaggttgattgctatgctgtataccccactgagatcaaatggttc +ttccgatgatgttttcactgtatcctgtagagttttgactaggcccaccccagattttgagttcaactacct +ggtcccacctactgtcgaatcaagaacaaaacccttcagtgtgcccatcctaactattggagaaatgacaaa +ttcaagg---tttccactgcccatagacatgctgtacaccagcccaactgaaaacatagtagttcagcccca +aaatggtaggtgcacgttggaaggagaactactgggcacaacccagttagtgaccccgaacatctgcgcgct +acgtg-----------------------------------------gggagatcaggg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----gtggtgaca----------------------------------accacaaa----------------- +----------tggcattttatggtgaggagccccaatggggcagcttttgacccaactgaggatgtgcccgc +ccccctaggcacccctgatttcataggtgatgtgtttggagtcctctcacaaa---gaaacagaaa---cac +tgacagt-----ggtcagtctggtcctgcaaac--------aga-----------tcacatgatgctgttgt +ttccacaagggacagcagattcactccaaaactaggatctgtgatgatagcca---------cctgggagac +cagtgacat---cca---agaccagcccacca---------------------------gattcactccag- +--------taggc------cttgaaaaccctg------------atcattacaaccaatggcaattaccaaa +ttattcaggggca-ttaact------ctaaacatggggctggccccatctgtgtttccaacctaccccggag +agcaaatcctcttcttccgctcgtacatcccac------ttaagggcggata------tggag--------- +--attcccacattgattgcctggtaccacaggaatggatccaacatttctaccaagaatcagccccctcaca +aactgatgtggcattaatcaggtatgtgaaccccgaaacaggacgtgtcctgttcgaggccaagttgcatag +gcaaggttacataacagttgcaaggagtggcagcagtcccatcaatgtcccggccaatggctatttcagatt +cgactcctgggtcaaccaattctactcactcgcccccatgggaactggaaacgggcgcaga---------ag +gatcc---------aataatggcaggagctttcttagcaggattggcaggcgatatcgccactaacaccatg +gggtctttggtcagtgcagg---ggctaatgcaatcaatcagaaagttgattttgagaataataaattt--- +------------------------------cttcaaggtgaatcttttaagcatgataaggaaatgttgaat +gcacaggttgaagccacaaagaaactccagatggacatgattaacatcaaacaaggggtcttgactgctggg +ggattttcccccactgatgcagcccggggggccatcaacgcacccatgactaaggtgctggattggaatggg +acaaggtactgggcaccgaatgccaccaccacaacctcaatgtctggtggcttcactagt------------ +ca-----------ggtcgtgcacaggccaacaccaaat---------------------------------t +ttgggaa----------------caagcaagcccccaggcccgcg--------------------------- +-------------------------------------------------cct---------------agcat +tgcttcat-----------ctgag------------agatcaaattctacccaactcaccagt--------- +----------ctgagc-------tcccactc------ctctggatcttcgaggtccagtggatccaccgtgg +tcagctcac------tgc--------------------------------cct------------------c +ttcgag---------------------------------------taggactagggagtgggtagacagtca +aaatttcaatttggaaccccatttgc---ctgggtcgctgaagacagcctttgtcaccccaccatcaagtgt +tgcttca---agct------------------------------caggaa---cagtctcaactgtgcctaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattgtttg---- +atta-a-att-tgat------------------------------------ttaa-tt------tggcttaa +a---------------------tcttttaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>MN447470.1/1-7579 |Norovirus GII isolate Hu/US/2008/GII.16[P16]/US0366, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacgaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccgcctaatggc------gaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcctgagctcacgacagttccccaacc +gaatgtgaccaatacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgtt +gactggggcaatactagagatgtgggatggagagatataccactatggtttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagtatggcaaaggtggaaatgacgccgctgtcattgtactg +gcgtgtggtgtacacccctc---aatatctcatctcccctgatactctcaagaggctcaacggggaggcatt +cccttacactgcctttgacaacaactgttatgccttttgctgctgggtgttagatcttaatgactcatggct +cag---cagaaggatggtgcagagaacaacaggcttcttcagaccctaccaagagtggaacaggaaacccct +acccactatggatgactcaaagattaagaaggtggcaaacattttcttatgttcattgtccacgctgttcac +cagacctataaaagacatcataggaaaaatcaaaccactaaatatcttgaacattctggcaacgtgtgactg +gacgttcgccggaattgtagagtctctaatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggcgagtacgagctgcaagggccagaagacatcgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgctaggattcaccaaggagaaaattggcaaaatgct +gtcctcagcagcatcaacccttagggcttgcaaagaccttggtgcttatggtttagagatactcaaactggt +catgaaatggttcttcccaaagaaagaagaggccaatgaactagccatggtgagagcaatagaggatgctgt +actagacctcgaagcgatagaaaacaatcacatgacagctctgctgaaagataaggacagccttgcaaccta +catgaaaacactggatctagaggaagagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcggcggctagatcgctagtccatagggccaaggaggagct +atctagcaggatcaggccagttgttgttatgatttctggcaagccagggataggcaagacccacctagccag +ggaggtggcgagaaaggtggcatccactctcacgggagatcaaagagtcggactcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagcaaccccatcca +tgatgctctgcgcatacaggagttggccgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataatcacaacaaaccttgccaatccagctcccctcgattatgt +caactttgaggcctg-ttccagaagaattgacttcctggtgtacgccgaagcaccagaagtggaaaaagcaa +aacgagacttccctggtcagccagatatgtggaaggacgccttcaaagcagacttttcgcatatcaagctac +aacttgcgcctcagggcggttttgacaagaacggcaataccccacatggtaaaggagtgatgaagaccctca +ctactggttctctgattgcccgcgcgtcaggtttactacatgagaggatggatgaatttgaactccagggcc +ccacaatcaccactttcaatttcgaccgaaacagaatcaccgcctttagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagggttggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +caattaagaatgtgtccatcaagaggtgccagattatctataatggctccacgttcgatcttgagtctgatg +gtaagggcaaagttttagtggaaaaggtcaaaagcacctctgttcagaccaacaacgagctggccggagccc +tgcatcacctcagaagtgctcgaattaggtattatgtcaaatgtgtgcaagaagcagtctactccatcctgc +aaattgccggcgctgcgttcgttaccacacgcattgcacgccgcatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------accagaggctaaagaagaggcccccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacacagcattctctagcaagggcttgagtgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttttgcgaggaagaagaaattaaaatccgccaga +gaatctttcgccccactagaaaacaaaggaaggaagaaagggccacgctaggactagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaattggactttgaggcccccccaagcatatggtctagaattgtgagctttggttccggttggg +gcttctgggtgtcac-caagtctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgagttttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgattctggaagagggcgcgccagagggcactgtggcaaccgtgctaatcaaa +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaagggtatggatttgggaacaactcct +ggtgattgtggttgcccgtacatctacaaaaggggcaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaatactgtcatctgcgccacgcagggaagtgagggtgaggcgactctcgagggtggagac +gacaaaggaacatactgtggggcacccattctgggccctggaggagcaccaaaattgagtaccaaaaccaaa +ttctggaggtcatcaaacacgcccctcccaccagggacatatgagcccgcttaccttggtggtcgtgacccg +cgtgtgaagggtgggccctctttgcagcaagttatgagagatcagttgaagcccttcactgagcccaggggt +agacctccaagacctagtgtactggaggcagctaaacaaaccatcatcaacgtcctcgagcaaaccttggac +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagacctttattggtaagttggcagaccaagcatcaaaagca +aatttgatgtatgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtcaag +actgacaaaatctatggtaagatcaagaagagactgctttggggttctgacttgtccaccatggtccgatgt +gctagggcctttggtggactcatggatgagatgaaggcacactgcatatcactcccagttcgagttggtatg +aacatgaatgaggatggcccaataatatttgagaagcattccagatataagtaccattatgatgctgattac +t-cccgctgggattcaacacaacaaagggctgttctagcagcggccttggagataatgg-tcagattctctg +cagaaccacaact-ggcgcaaacagtcgctgaagatctgctggcccctagtgtggtagatgtaggggacttc +aaaatctcaataagtgaggggctcccttctggtgtaccatgcacttcccagtggaactccatcacacattgg +ctgctgactctctgtgctttgtctgaagtcaccaacctgtcccctgatatcgtgcaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agagaatatggtctgaaaccaacccgcccagataaaactgagggacccctgatcatcagcgaggatttggac +ggactcactttcctccggaggacagtttctcgtgacccagctggctggtttggaaagctagatcaaagttca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggcgaggcttccctccatggaccctctttctatagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcactagagccagttgcaggagcttcaattgctgcccctttaactggtcaaaacaatgtaataga +cccctggattagattaaattttgtacaagcccccaatggtgagttcacggtttccccccgaaactcgcctgg +tgaaattttgttaaatttggagttagggcctgaattaaatccatacttagcccatttagcaaggatgtataa +tggttatgcaggtggggttgaggtgcaggtactgctggctggaaatgcgtttacagc---aggcaaacttgt +atttgcagcaatcccccctcattttccagtagataatttgagccctggccagattactatgttcccccatgt +gattattgatgttagaacacttgaacctgtcttgttaccattacctgatgttagaaataatttctttcacta +taatcaacagagtgat---cagcgcatgagacttgttgctatgctttatacccctcttagatctaatggttc +aggtgatgatgtcttcactgtgtcatgcagggtcctaaccaggccatcccctgattttgattttaattatct +ggttcctccaacagttgaatctaaaactaaacccttctcagtcccagtgctaacccttaatgagctgaccaa +ctctcgt---tttcctgttccgattgatgccatgtacaccagccctaatgactcaattgtggtccaacctca +aaatggaagggcaaccatagacggtgagttgcttggcaccactcaactcatacccagtggtatctgttcatt +taggg-----------------------------------------gaaaaatcacaacac----------- +-----------atttgtc------------------------------------------------ag---- +-------atgata----------------------------------ggcac-------------------- +-------ttgtggaacatccaagtctccaatttgaatggcactccgtttgacccaacagacgacgtgcccgc +accattgggtatgccagacttctctgggcaaatatttggggtggttagtcaaa---gggacacag------- +----------------gcaccaaccccgcaaac--------aga-----------gctcatgacgctgttct +tgcaacctacagcgccaaatacacacctaagctcggctcagtccaaattggaa---------catgggacac +cgaggattt---gcttgaaagacagcctgtca---------------------------agttcacgcccgt +tggtctcaatgaaata---------gggcaagacaagcat---------ttcgaccaatgggtgttgccaaa +ttattctggtgcc-ctggga------ctcaacatgcacctggctcctgctgtatccccactctttcccggag +agagattattgttctttagatcatatatacct------ctaaaaggtggcca------tgggg--------- +--acccatttattgattgtcttgtgccacaagagtggatacaacatttttaccaagaatcagccccagcaca +atcctcggtggctctactgaggtatgtgaatccagacacaggtcgcactctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagcacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgactcttgggttaaccaattttactcattagcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgctggtgacattgtcactaacggcatt +ggttcgcttgtgaacgctgg---agccaatgctataaaccaaaaagttgattttgaaaataacaaacagcta +caacagg---------------------------------cctcttttaaccatgacaaagagatgctgcaa +gcccaaattcaagccaccaaacagctacaggctgacatgatttcaatcagacaaggggttttgaccgcgggc +ggcttctcccctactgatgctgcaaggggtgcagtcaacgcaccgatgacccaagtgctggactggaatgga +actagacattgggcccctggagcctcaagaactaccagcttctctggtgggttcaccaattct--------- +ac---------------------ccgtgccagaacagttgagccacctaaaagttccccccctgttcaaaat +actttga----------------tctctgcttctagac--------------ctag---------------- +------------------------------ctctactgtctcatcttcctct------------------ac +ccgttcga-----------ctgtg------------gttactagctcttctactcccc-------------- +----catctattaggt-----cttctgtaac------tagaagttcacc-----------cc--------gc +-------------------agtgtttctcaatctgtttctc---------ctg------------------t +ttcttc---------------------------------------tcgcactggtgattgggtgcaaaacca +aaatagaatgctggagccatatctga---gggggtcgttgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---agta------------------------------atggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------ttaatacccgcagacagccgctcttcgctc +acctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagaatt-------- +---a-g-att-ttct-----tt------------ttctttc----------tt-------------tccttt +t-gttgaaaatc-ttat---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaa---------- +------------------------------------------------------------------------ +- +>MN447471.1/1-7578 |Norovirus GII isolate Hu/US/2008/GII.16[P16]/US0367, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacgaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccgcctaatggc------gaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcctgagctcacgacagttccccaacc +gaatgtgaccaatacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgtt +gactggggcaatactagagatgtgggatggagagatataccactatggtttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagtatggcaaaggtggaaatgacgccgctgtcattgtactg +gcgtgtggtgtacacccctc---aatatctcatctcccctgatactctcaagaggctcaacggggaggcatt +cccttacactgcctttgacaacaactgttatgccttttgctgctgggtgttagatcttaatgactcatggct +cag---cagaaggatggtgcagagaacaacaggcttcttcagaccctaccaagagtggaacaggaaacccct +acccactatggatgactcaaagattaagaaggtggcaaacattttcttatgttcattgtccacgctgttcac +cagacctataaaagacatcataggaaaaatcaaaccactaaatatcttgaacattctggcaacgtgtgactg +gacgttcgccggaattgtagagtctctaatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggcgagtacgagctgcaagggccagaagacatcgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgctaggattcaccaaggagaaaattggcaaaatgct +gtcctcagcagcatcaacccttagggcttgcaaagaccttggtgcttatggtttagagatactcaaactggt +catgaaatggttcttcccaaagaaagaagaggccaatgaactagccatggtgagagcaatagaggatgctgt +actagacctcgaagcgatagaaaacaatcacatgacagctctgctgaaagataaggacagccttgcaaccta +catgaaaacactggatctagaggaagagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcggcggctagatcgctagtccatagggccaaggaggagct +atctagcaggatcaggccagttgttgttatgatttctggcaagccagggataggcaagacccacctagccag +ggaggtggcgagaaaggtggcatccactctcacgggagatcaaagagtcggactcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagcaaccccatcca +tgatgctctgcgcatacaggagttggccgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataatcacaacaaaccttgccaatccagctcccctcgattatgt +caactttgaggcctg-ttccagaagaattgacttcctggtgtacgccgaagcaccagaagtggaaaaagcaa +aacgagacttccctggtcagccagatatgtggaaggacgccttcaaagcagacttttcgcatatcaagctac +aacttgcgcctcagggcggttttgacaagaacggcaataccccacatggtaaaggagtgatgaagaccctca +ctactggttctctgattgcccgcgcgtcaggtttactacatgagaggatggatgaatttgaactccagggcc +ccacaatcaccactttcaatttcgaccgaaacagaatcaccgcctttagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagggttggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +caattaagaatgtgtccatcaagaggtgccagattatctataatggctccacgttcgatcttgagtctgatg +gtaagggcaaagttttagtggaaaaggtcaaaagcacctctgttcagaccaacaacgagctggccggagccc +tgcatcacctcagaagtgctcgaattaggtattatgtcaaatgtgtgcaagaagcagtctactccatcctgc +aaattgccggcgctgcgttcgttaccacacgcattgcacgccgcatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------accagaggctaaagaagaggcccccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacacagcattctctagcaagggcttgagtgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttttgcgaggaagaagaaattaaaatccgccaga +gaatctttcgccccactagaaaacaaaggaaggaagaaagggccacgctaggactagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaattggactttgaggcccccccaagcatatggtctagaattgtgagctttggttccggttggg +gcttctgggtgtcac-caagtctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgagttttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgattctggaagagggcgcgccagagggcactgtggcaaccgtgctaatcaaa +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaagggtatggatttgggaacaactcct +ggtgattgtggttgcccgtacatctacaaaaggggcaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaatactgtcatctgcgccacgcagggaagtgagggtgaggcgactctcgagggtggagac +gacaaaggaacatactgtggggcacccattctgggccctggaggagcaccaaaattgagtaccaaaaccaaa +ttctggaggtcatcaaacacgcccctcccaccagggacatatgagcccgcttaccttggtggtcgtgacccg +cgtgtgaagggtgggccctctttgcagcaagttatgagagatcagttgaagcccttcactgagcccaggggt +agacctccaagacctagtgtactggaggcagctaaacaaaccatcatcaacgtcctcgagcaaaccttggac +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagacctttattggtaagttggcagaccaagcatcaaaagca +aatttgatgtatgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtcaag +actgacaaaatctatggtaagatcaagaagagactgctttggggttctgacttgtccaccatggtccgatgt +gctagggcctttggtggactcatggatgagatgaaggcacactgcatatcactcccagttcgagttggtatg +aacatgaatgaggatggcccaataatatttgagaagcattccagatataagtaccattatgatgctgattac +t-cccgctgggattcaacacaacaaagggctgttctagcagcggccttggagataatgg-tcagattctctg +cagaaccacaact-ggcgcaaacagtcgctgaagatctgctggcccctagtgtggtagatgtaggggacttc +aaaatctcaataagtgaggggctcccttctggtgtaccatgcacttcccagtggaactccatcacacattgg +ctgctgactctctgtgctttgtctgaagtcaccaacctgtcccctgatatcgtgcaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agagaatatggtctgaaaccaacccgcccagataaaactgagggacccctgatcatcagcgaggatttggac +ggactcactttcctccggaggacagtttctcgtgacccagctggctggtttggaaagctagatcaaagttca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggcgaggcttccctccatggaccctctttctatagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcactagagccagttgcaggagcttcaattgctgcccctttaactggtcaaaacaatgtaataga +cccctggattagattaaattttgtacaagcccccaatggtgagttcacggtttccccccgaaactcgcctgg +tgaaattttgttaaatttggagttagggcctgaattaaatccatacttagcccatttagcaaggatgtataa +tggttatgcaggtggggttgaggtgcaggtactgctggctggaaatgcgtttacagc---aggcaaacttgt +atttgcagcaatcccccctcattttccagtagataatttgagccctggccagattactatgttcccccatgt +gattattgatgttagaacacttgaacctgtcttgttaccattacctgatgttagaaataatttctttcacta +taatcaacagagtgat---cagcgcatgagacttgttgctatgctttatacccctcttagatctaatggttc +aggtgatgatgtcttcactgtgtcatgcagggtcctaaccaggccatcccctgattttgattttaattatct +ggttcctccaacagttgaatctaaaactaaacccttctcagtcccagtgctaacccttaatgagctgaccaa +ctctcgt---tttcctgttccgattgatgccatgtacaccagccctaatgactcaattgtggtccaacctca +aaatggaagggcaaccatagacggtgagttgcttggcaccactcaactcatacccagtggtatctgttcatt +taggg-----------------------------------------gaaaaatcacaacac----------- +-----------atttgtc------------------------------------------------ag---- +-------atgata----------------------------------ggcac-------------------- +-------ttgtggaacatccaagtctccaatttgaatggcactccgtttgacccaacagacgacgtgcccgc +accattgggtatgccagacttctctgggcaaatatttggggtggttagtcaaa---gggacacag------- +----------------gcaccaaccccgcaaac--------aga-----------gctcatgacgctgttct +tgcaacctacagcgccaaatacacacctaagctcggctcagtccaaattggaa---------catgggacac +cgaggattt---gcttgaaagacagcctgtca---------------------------agttcacgcccgt +tggtctcaatgaaata---------gggcaagacaagcat---------ttcgaccaatgggtgttgccaaa +ttattctggtgcc-ctggga------ctcaacatgcacctggctcctgctgtatccccactctttcccggag +agagattattgttctttagatcatatatacct------ctaaaaggtggcca------tgggg--------- +--acccatttattgattgtcttgtgccacaagagtggatacaacatttttaccaagaatcagccccagcaca +atcctcggtggctctactgaggtatgtgaatccagacacaggtcgcactctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagcacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgactcttgggttaaccaattttactcattagcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgctggtgacattgtcactaacggcatt +ggttcgcttgtgaacgctgg---agccaatgctataaaccaaaaagttgattttgaaaataacaaacagcta +caacagg---------------------------------cctcttttaaccatgacaaagagatgctgcaa +gcccaaattcaagccaccaaacagctacaggctgacatgatttcaatcagacaaggggttttgaccgcgggc +ggcttctcccctactgatgctgcaaggggtgcagtcaacgcaccgatgacccaagtgctggactggaatgga +actagacattgggcccctggagcctcaagaactaccagcttctctggtgggttcaccaattct--------- +ac---------------------ccgtgccagaacagttgagccacctaaaagttccccccctgttcaaaat +actttga----------------tctctgcttctagac--------------ctag---------------- +------------------------------ctctactgtctcatcttcctct------------------ac +ccgttcga-----------ctgtg------------gttactagctcttctactcccc-------------- +----catctattaggt-----cttctgtaac------tagaagttcacc-----------cc--------gc +-------------------agtgtttctcaatctgtttctc---------ctg------------------t +ttcttc---------------------------------------tcgcactggtgattgggtgcaaaacca +aaatagaatgctggagccatatctga---gggggtcgttgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---agta------------------------------atggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------ttaatacccgcagacagccgctcttcgctc +acctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagaatt-------- +---a-g-att-ttct-----tt------------ttctttc----------tt-------------tccttt +t-gttgaaaatc-ttat---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MN400355.2/1-7556 |Norovirus GII isolate Hu/HK/2019/GII.4 Hong Kong[P31]/CUHK-NS-2200, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aaaagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttatctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattgatc-------aaaaagatccc +ccc-----------------------------ccccccacccaacgg------ggaggatgaactagtggtt +tcctacagtg----------ccaa---agatggcgtttccggcctgcctgagctcactactgtcggacaacc +ggatgagaccaacacggcgttcagtgttcccccgctcaaccagagggagaatagggacgctaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatataccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagctttgccaaggtcgagctagcaccactttctttgtactg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggaggctgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattaacagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactgtggatgattccaaattgaaaaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatcctcaatattctggccacatgcgactg +gaccttcgcaggcatagtggagtccttaatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactaggtgattatgaactgcaagggcctgaggaccttgcagtaga +actagtcccagtggtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaagatgtt +gtcatccgctgcatccactttgagagcttgcaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagtgagtgaattggctatggtgagatccatcgaggacgcagt +actggacctcgaggcaattgaaaataaccacatgaccgcattgctcaaggacaaagacagtctggcaaccta +tatgaggaccctcgacctcgaggaggagaaagccagaaaactttcaaccaaatctgcttcacccgacattgt +gggcacaatcaacgctcttctggcaaggatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctctagcaggctgagacccgttgttgtgatgatatcggggaagccagggatagggaagactcacctcgccag +agagctggccaagaagatcgcggcctccctcactggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggatgcgtacaagggagaaagagtggttctttgggacgactatggaatgagtaaccccatcca +tgatgccctcagattgcaggaacttgctgacacctgtcccctcacactaaactgtgacaggattgagaataa +agggaaggtctttgacagtgatgctataattattaccaccaacctggccaacccagcgccactggattatgt +caattttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgatgtggaaaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgcgttcagtcctgatttctcacacctgaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggcgtcatgaagactctca +ccactggctctctcatcgctcgagcttcaggtttgctccatgagaggctagacgagtatgaactacaaggcc +caactctcaccactttcaactttgaccgtaacaaaatccttgctttcaggcagcttgccgctgaaaacaaat +atgggctggtggacacaatgaggattggaaaacagctcaaggatgtcaagaccatgccagacctcaaacagg +cactcaagaatgtctctatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaatgaactagctggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcgctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcactaagcgcatga------acatacagaatctctggt +ccaggccacaggtggaagacacagaaga--------gacggctagcaaagatggttgcccaaaacctaaa-- +-gat----gatgaag---agtttgtcgttgcatccgacgacgtcaaaactgaaggcaagaaggggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaggagtaccttcaggacagggacaagtac---t +atgaggaggtggccatcgcaagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaggagagggcttctctcggtttggtcacaggctctgaaa +ttaggaagagaaacccagaagacttcaaacccaaggggaaactgtgggctgacgatgataggagtgttgact +acaatgagaaactcagctttgaagccccaccaagcatctggtcacggatagtcaactttggttcaggttggg +gcttttgggtctccc-ccagtctgtttataacctcaacccatgtcataccccaagatgcaaaagagttcttt +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgaggtttccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggagaactcatgcctttggcagtaaggatgggaacccatgcaaccatgaagattcaagggcgt +acagttgggggacaaatgggcatgctcttgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgtccctacatttacaagagagggaatgactacgtggtcataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgctacccaggggagtgaaggagaggccacactcgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccgaaactcagcaccaagaccaag +ttttggagatcatccacgacaccactcccacctggcacctatgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggtccctcgttgcaacaagttatgagggaccagctaaagccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccattatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcgtccctcgacaaaaccacttccagcggttatccacac +catgtgcggaagaacgactgttggaacggggattccttcacaggaaaattggcagaccaggcatccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcgcttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaaaaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacccttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaaacactctagatatagataccactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtactggcagcagcccttgaaatcatgg-ttaaattttctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataaatgagggactcccctccggggtgccttgcacctcccaatggaattccattgcccattgg +cttctcactctttgtgcactctctgaagtcacggatttgtcccctgatattattcaggccaattcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacggcaaagctc +aaggagtacgggctaagaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacatagctggctggtttggcaaattggaacagagctca +attctcaggcaaatgtactggaccaagggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcactccatggcccggcattctatagcaaaatt +agcaagttagttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggcgccgctattgcggcacctgtggcgggccaacaaaatttaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcctttgggccccgatttgaacccttatctttctcatttggccagaatgtacaa +tggttatgcaggtggctttgaggtgcaggtaatccttgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttaccatgtttccccatgt +aatagtagatgttaggcaactagaacctgtgttgatccctttacctgatgtcaggaataatttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggcaaataatgc +tggggatgatgtcttcacggtctcttgtcgggtccttacgaggccatcccctgattttgattttatatttct +ggtaccaccaacagttgagtcaagaactaaaccttttactgtcccaatcttaaccgttgaggaaatgaccaa +ttcaaga---ttccccattcccttggagaagctgtatacgggtcccagcactgcttttgttgttcagccaca +aaatggtagatgcacgactgatggcgtgctcttgggcactacccagctgtctgctgtcaacatctgtacctt +tagag-----------------------------------------gagatctcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgcc----------------------------------aattcaca----------------- +----------------atgcatttggcctctccgaactggaacaactatgatccaacagaagaaatcccagc +ccccctgggaaccccagatttcgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgc-----------ggccacaaagccatagt +gtccactggggctgccgactttgccccaaaatcaggcaacattcgattcggca---------ctgacacaga +agatgatct---ccaatctggcacaaacacga---------------------------aattcaccccaa- +--------ttggcgtcgtccaagatggtgaaaacccccactttagtgaaccccaacaatgggtgctcccaag +ttacacaggtaga-actgga------cataatgtgcatttggcccctgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acttggacatagactgcttgctcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggatatgttacagtagctcatactggtcctcatgatctagctatcccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgtat---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttccttgattaatgctgg---ggctggagctatcaatcaaaaagttgaatttgaaaataatagaaaattg +caacaagctgctttccaatttagtagtaatctgcaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccactcaaaaattgcaacaaggtatgatgaaggttaagcaggcgatgcttctagaaggt +ggattctctgaaacagatgcagctcgtggggcaattaacgcccccatgacaaaggccttggattggagtgga +acaagatactgggcacctgatgctagggttacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------ggactaatctcagggctac------------------------------ +------------------------------tctccccactcggggttcttct------------------ag +tgttactt-----------ctg---------------cttcttctgctactt-------------------- +----------ctgtgt-----attcaaataa------aactgtctcaac----------gag--------gc +ttggttc--------ttcagcaggttctggcaccagcgcctcaagcaccccgt------------------t +aactac---------------------------------------aaggaccaggagctgggttgaggatca +aaacagaaacttgtcacccttcatga---gtggggctctcaacacatcattcgtcaccccaccatctagcag +atcctcc---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atgtccgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctatc----------c-t-----t--------tcttt- +-------a-------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN394542.1/1-7532 |Norovirus GII isolate 34 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaatagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggtatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +tagacccataaaagaccttataggaaaaatcaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagataaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtctacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggatgaggccggtagttgttatgatatctggcaaaccaggaataggcaagactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctatcca +tgatgctcttcgcatacaagaactggctgatacgtgtcccctcaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcaaccagatatgtggaaggacgctttcaagccggacttttcgcacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacagagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagcttcggttctggctggg +gtttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgctgctcactggatcaaatgctaaagggatggacttaggaacaactcct +ggtgattgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctatctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggcttccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatatcatacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaggaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaataaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgatgttaggaacaacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagcctttcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagttagcggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacataatag +tcct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtta---------------------------aatttaccccag- +--------ttggactc---------aatgacactgaacac---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggttttatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtagg---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacgtcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctctgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agtacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gat---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN394543.1/1-7451 |Norovirus GII isolate 35 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaagtcttcaagtgacg---------------gtgtgttatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggatataccacca +aga---------------------cccccgagaccgcccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacagtg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +actcggtgtacacaaaccaccagcagctatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattacatggggaaacgtt +cccttacacagcttttgacaacaactgctatgccttctgctgttgggtccttgacttaaacgattcatggct +gag---cagaaggatggtacagaggacaacgggtttctttcggccctaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgcgattg +gacttttgcaggcatagtagagtccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctacaggggcctgaggacctcgctgtgga +actcgttcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagacaaacgagttggcaatggtgagatccatcgaggacgcagt +gctggatctcgaggctattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaagagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctgctggcaaggattgcagctgcccggtccctagtacacagggctaaggaagaact +gtctagcagacytcgaccggtcgttgtgatgatttcagggaggccaggtatagggaagacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtaggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccccatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagtcgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaagcctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaacacccctcacgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagatgagtatgagctacaaggcc +taactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgacacaatgagggtcggatcacaactcaagaacgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaggaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gtaaaggcaatgtgtgtgttgaaaaggtgaagagcacaagtgtgcagactaacaatgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgccggggctgcatttatcaccacgcgcattgcaaagcgcatga------acatacagaacctatggt +caaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gaa----gacgagg---agtttgttatctcctctgatgacatcaaaactgagggcaagaaaggaaagaaca +agactggccgtggtaaaaagcacacagccttttccagcaaaggcctcagcgatgaggagtacgacgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagagcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagaggaatccagatgacttcaaacctaaagggaagttatgggctgatgatgacaggagtgttgact +acaatgagaaacttgactttgaggctccaccaagcatttggtcacggatagtcaactttggctcaggatggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcctaaaggcgcacaggagttcttt +ggagtgcctattaagcaaatacaaattcacaaatcaggagagttctgccggcttagatttccaaaaccaatc +aggaccgatgtcacgggcatgatattagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcaaccatgaaaatccagggccgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccttacatctacaagagggggaacgactacgtggtcattggagtccacaccgctgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtagcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaacttagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttacgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccatttactgagcccagaggt +aaaccacccaaacctagtgtgctagaagctgccaaaaagactataattaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagacaagactacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaatggagaggctttcacaggaagattggcagaccaggcatcaaaagct +aacctaatgtacgaggaaggaaagaacatgaccccggtatacacaggagctctgaaggacgaactggtcaag +actgataagatctatgggaagatcaaaaagaggctcctatggggttcggacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgaactcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaagatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagctctagaaataatgg-tcaaattttcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggttaccctctggtgtgccttgcacttcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctacagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---cgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagccccaaatggagaatttacagtatcacccagaaattcccctgg +agagattttattaaatttagagttgggaccagatttgaacccttatttggcccatctatcaaggatgtacaa +tgggtatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaattttcctgtagatatgattagtccagctcaaattactatgctcccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctacaccccattgagatctaatggttc +aggagatgatgtttttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattaaccatttctgaactaaccaa +ttcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtggg--g------acaattggg----------------------------------- +----------acc----------------------------------agaatttg----------------- +----------------ctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtggaatattgtatggtgtgttaacccaag---acaa------------ +-----tgtgagtgagggtacaggggaggccaaa--------aat-----------gctaagggagtatatat +ttccaccaccagtggaagattcaccccaaaaattgggacaattggactgcat------------tcaataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctcagaatga------------aaacacccccttccagcaatgggtcctaccaca +ctacgcaggtgct-ctcgct------ctaaatactaatttggcacccgctgttgccccgactttccctggtg +agcaactgctgtttttcaggtcccgtgttccatgt---gttcaaggtctgca--------------ggggca +ggatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +ggcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgcactctgtttgaggccaaactgcacag +gtcaggtttcatcactgtgtcacacactggtacctaccctcttgtggttcccccgaatggtcattttaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agctc---------aataatggcaggagcatttatagctggtctagccggtgatatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattataacaaacaa--- +------------------------------ctccaaaatgcatcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttagattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcagttcacc-ccctc--------- +gc-------------cagtccatcgggcg----caggt---------------------------------- +--------------------------------------gaagttcccttctaattcatcc-ctgcggactgc +aactccaagcag------------------------tatccgcagcctgtcaactcaatcaac--------- +---ttctt--------------------------------taggctccacctc------------------- +------------------------ctcaagg------gggtcctct-------------------------g +cagcctc--------c------------------------------------t------------------c +tagttc---------------------------------------gaggacagcagattgggtgcaacaaca +a---agggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaggggat-------- +-------aat-caa---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN394544.1/1-7463 |Norovirus GII isolate 36 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------gttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggtgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagagacatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaagaaagtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggaggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgatcgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctgtgcagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +agattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaggagagaaatgggaagtattctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgttagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaattcccgcaggcataacagaagcattt +ggagtccccatcaaccaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcggacacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcgcactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaactgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatgttataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttatcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaaattggt +tttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtttcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagcgtccatagaccagatgtataccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggaccccttttgatccctccgaggacatccctgc +ccctttgggtgtgcctgacttccagggaagagtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaacttgggcaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctgg +gtatgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggatactggtcgggcactgtttgaggctaagctccacag +agctggttttatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggtagaattcgattttaatcaaaggttg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacagacgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgtc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacaacctcatc-----------aa--------ac +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---aac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN394545.1/1-7451 |Norovirus GII isolate 37 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaagtcttcaagtgacg---------------gtgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggatgtaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacagtg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +actcggtgtacacaaaccaccagcagctatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattacatggggaaacgtt +cccttacacagcttttgacaacaactgctatgccttctgctgttgggtccttgacttaaacgattcatggct +gag---cagaaggatggtacagaggacaacgggtttctttcggccctaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaargacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgcgattg +gacttttgcaggcatagtagagtccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctacaggggcctgaggacctcgctgtgga +actcgttcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagacaaacgagttggcaatggtgagatccatcgaggacgcagt +gctggatctcgaggctattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaagagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctgctggcaaggattgcagctgcccggtccctagtacacagggctaaggaagaact +gtctagcagacytcgaccggtcgttgtgatgatttcagggaggccaggtatagggaagacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtaggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccccatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagtcgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaagcctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaacacccctcacgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagatgagtatgagctacaaggcc +taactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgacacaatgagggtcggatcacaactcaagaacgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaggaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gtaaaggcaatgtgtgtgttgaaaaggtgaagagcacaagtgtgcagactaacaatgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgccggggctgcatttatcaccacgcgcattgcaaagcgcatga------acatacagaacctatggt +caaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gaa----gacgagg---agtttgttatctcctctgatgacatcaaaactgagggcaagaaaggaaagaaca +agactggccgtggtaaaaagcacacagccttttccagcaaaggcctcagcgatgaggagtacgacgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagagcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttgtgaga +ttaggaagaggaatccagatgacttcaaacctaaagggaagttatgggctgatgatgacaggagtgttgact +ataatgagaaacttgactttgaggctccaccaagcatttggtcacggatagtcaactttggctcaggatggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcctaaaggcgcacaggagttcttt +ggagtgcctattaagcaaatacaaattcacaaatcaggagagttctgccggcttagatttccaaaaccaatc +aggaccgatgtcacgggcatgatattagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcaaccatgaaaatccagggccgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccttacatctacaagagggggaacgactacgtggtcattggagtccacaccgctgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtagcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaacttagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttacgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccatttactgagcccagaggt +aaaccacccaaacctagtgtgctagaagctgccaaaaagactataattaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagacaagactacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaatggagaggctttcacaggaagattggcagaccaggcatcaaaagct +aacctaatgtacgaggaaggaaagaacatgaccccggtatacacaggagctctgaaggacgaactggtcaag +actgataagatctatgggaagatcaaaaagaggctcctatggggttcggacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgaactcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaagatggacccataatatttgagaaacattccagatacagatatcattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagctctagaaataatgg-tcaaattttcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtatgatggatgtgggtgatttc +aagatttcaatcaatgaggggttaccctctggtgtgccttgcacttcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctacagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---cgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagccccaaatggagaatttacagtatcacccagaaattcccctgg +agagattttattaaatttagagttgggaccagatttgaacccttatttggcccatctatcaaggatgtacaa +tgggtatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaattttcctgtagatatgattagtccagctcaaattaccatgctcccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctacaccccattgagatctaatggttc +aggagatgatgtttttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattaaccatttctgaactaaccaa +ttcccgg---tttcccatcccaattgagcaactgtacacggccccaagtgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtggg--g------acaattggg----------------------------------- +----------acc----------------------------------agaatttg----------------- +----------------ctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtggaatattgtatggtgtgttaacccaag---acaa------------ +-----tgtaagtgagggtacaggggaggccaaa--------aat-----------gctaagggagtatatat +ttccaccaccagtggaagattcaccccaaaaattgggacaattggactgcat------------tcaataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctcagaatga------------aaacacccccttccagcaatgggtcctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggtg +agcaactgctgtttttcaggtcccgtgttccatgt---gttcaaggtctgca--------------ggggca +ggatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttaccaagaggctgctccctccca +ggcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgcactctgtttgaggccaaactgcacag +gtcaggtttcatcactgtgtcacacactggtacctaccctcttgtggttcccccgaatggtcattttaggtt +tgactcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agctc---------aataatggcaggagcatttatagctggtctagccggtgatatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattataacaaacaa--- +------------------------------ctccaaaatgcatcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttagattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcagttcacc-ccctc--------- +gc-------------cagtccatcgggcg----caggt---------------------------------- +--------------------------------------gaagttcccttctaattcatcc-ctgcggactgc +aactccaagcag------------------------tatccgcagcctgtcaactcaatcaac--------- +---ttctt--------------------------------taggctccacctc------------------- +------------------------ctcaagg------gggtcctct-------------------------g +cagcctc--------c------------------------------------t------------------c +tagttc---------------------------------------gaggacagcagattgggtgcaacaaca +a---agggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaagggat-------- +-------aat-caa---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN394546.1/1-7428 |Norovirus GII isolate 38 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------gccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaatat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggatttttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattgggaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtagtgatgggaggaataggtttggtgttgggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacccttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattgttggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +aacgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +caattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggtt +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccacttactctctactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaatccacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaggcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgagggtgaagccactcttgaaggagatgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcagcaagttatgagagatcaactcaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactactggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggctctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggtcgatgtgggcgatttc +aaaattgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacacggaccctcattttacagcaaggtt +agcaagttagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccacttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgtcgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctttttaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggaatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtaataa +tgatgattt---ccaatt---ccagccaacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------atcacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttgacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagaatgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgca- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH671553.1/1-7536 |Norovirus GII isolate BJFTJYX, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtc------------aacagc +a------ac----aacgacaacataaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaaggatccc +tcc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtttctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattgacacccctctcactgtattg +gaggcccgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaacttcacggtgagttatt +cccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggct +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +ccctactatggatgactcaaaattgaagaaggtcgcaaacatcgttctttgcgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaacattctggcctcatgcgattg +gaccttcgctggtatagtagaatcactaatcctcatggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgccgt +attagatctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggatatggaagaggaaaaagctaggaagctgtccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcacagggccaaggaggagct +ctccagcaggccaagaccagtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgactatgggatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +ggggaaggtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtatatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcgccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctgcaaggtc +cgcccatctcaaccttcaactttgaccgtaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaattaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggctatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------ggccaccataaaagaggggtgccccaaacctagg-- +-gat----gaagaag---aatttatcgtatcctcagatgatatcaagccagagggtaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggccttgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaaactgtgggccgacgacgacaggagcgtcgatt +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcctgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggcacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcgaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgctacacaagtagtggagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttaggccctggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccgttcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacgggaaaattggctgaccaggcatcaaaggct +aacctaatgtttgaagaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaggataaagaagaggttgctctggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcagccatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttt +aaagtttccatcaacgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaac +ggcctgaccttcctgaggagaaccgttacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaaacttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaatcttagcccacagcaaattaccatgttccctcacgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgac---cccaagatgagaattgtggccatgctttataccccccttaggtctaatggttc +gggtgatgatgtgtttacagtctcctgcagagtgttaactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatactcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccccgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcacaatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacattga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcagttctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctatcaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcctattctggaaagtt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcttttgtcacccagtcttcaaggccaactctg +actacaactactggtt-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcagcggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ttaggat--------gaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN307993.1/1-7512 |Norovirus GII isolate 010_GII.Pe_GII.4_Aragominas nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggccgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagattcc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactattggtt +tcttacagcg----------ccaa---agatggcgtttccgggctgcctgagcttaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgttcccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccaagtataagaagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaactaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggacttatcccacgcaatggtgt +cgatcattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaagagcttgccgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgtatcgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgaaacaagatgcttgcttttagacagcttgctgctgaaaacaagt +atgggctgatagacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtactctt +ctatggaggtggccattaccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggctccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgggcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggctcctgtggggttcagatctggcgaccatgatacgatgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaactcctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatcctttcaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgcttttccatccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307994.1/1-7510 |Norovirus GII isolate 016_GII.Pe_GII.4_Paraiso do Tocantins nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcattccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagccaactc +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307995.1/1-7512 |Norovirus GII isolate 029_GII.Pe_GII.4_Xinguara nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctcgctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaattgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacagatggaagatacagaaga--------gatgaccaacaaagatggttgcctaaaacccaga-- +-gat----aaggaag---agtttgtcgtctcatccgaggacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggctttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctgaggaagtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgtatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaaatttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccattgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgcagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcacctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaaaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ctgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttcaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307996.1/1-7512 |Norovirus GII isolate 031_GII.Pe_GII.4_Fortaleza do Tabocao nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctcgctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagagaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggggaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactctcaactgtgtccatcagcccatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacagatggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgtatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaatgccaagagtatggacctgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaaatttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggtcttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccattgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaatgttgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcacctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaaaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaaccaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggagcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttcaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +atattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307997.1/1-7512 |Norovirus GII isolate 032_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggattgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacggggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttttg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagtaaatgaattggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcaccagatattgt +gggcacaatcaactctcttctggcaagaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcttatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caacttcgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatgggaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcgtcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcacaactctcaactgtgtccatcagcccatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacgatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +agatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagatacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtattcctcatcactgggccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtactctt +ctatggaagtggccattaccagagcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacacctctaccacctggtacatatgaaccagcctacctcggtggcaaagacccc +agggttgaaggtggtccatctttgcagcaagtgttgcgagaccagctaaaaccattcacagaacccagaggc +aggccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaggatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaggacctcctttcccctagtgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggttgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggtcctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccag +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaatgatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccactcaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagctcccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcacccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgc------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------cgcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307998.1/1-7512 |Norovirus GII isolate 047_GII.Pe_GII.4_Santa Fe do Araguaia nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggaggaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggattgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgcattttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcggcacaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcactggtcc +ccaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccacatctc +tttcgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +taactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaagcccatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctacaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcagaaagggaaagaaca +agtccggccgtggcaagaaacacacagctttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactacg +aggaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggccataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcctgggcccggggagcgctccgaagctcagtaccaagactaag +cttcggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccgccaagaccaaatgtattggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaactacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaagttggctgatcaagcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagagccgcacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgaaggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagtacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttttggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggtgcaatgttgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggtttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaac------------tctttaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN307999.1/1-7512 |Norovirus GII isolate 048_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggattgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgcattttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +taactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctacaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcagaaagggaaagaaca +agtccggccgtggcaagaagcacacagctttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactacg +aggaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggccataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccgccaagaccaaatgtattggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaactacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaagttggctgatcaagcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagagccgcacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgaaggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagtacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggtttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaac------------tctttaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308000.1/1-7506 |Norovirus GII isolate 049_GII.Pe_GII.4_Couto Magalhaes nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggattgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgcattttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +taactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctacaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcagaaagggaaagaaca +agtccggccgtggcaagaagcacacagctttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactcct +ctatggaggtggccattaccatggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggccataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccgccaagaccaaatgtattggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaactacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaagttggctgatcaagcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagagccgcacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgaaggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagtacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttttggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgacgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggtttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tctttaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308001.1/1-7512 |Norovirus GII isolate 050_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---accgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccagggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaaaatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccaaatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgggcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtcccatcgtactcctcatcactgggccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggtggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcctgggcccggggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aatctaatgtttgaggagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggagcaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaggacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcccgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcgtccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308002.1/1-7512 |Norovirus GII isolate 065_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagagaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcaccagatattgt +gggcacaatcaactctcttctggcaagaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcttatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caacttcgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatgggaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcgtcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactgtgtccatcagcccatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacagatggaagatacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gaggaag---agtttgtcgtctcatccaaagacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattaccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgtatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaatgccaagagtatggacctgggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacacctctaccacctggtacatatgaaccagcctacctcggtggcaaagacccc +agggttgaaggtggtccatctttgcagcaagtgttgcgagaccagctaaaaccattcacagaacccagaggc +aggccgccagaaccaaatttgctagaagctgccaagaaaaccgtcaccaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttggccaagcttgcgcatccctggacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaggatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccattgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggttgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgacggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccactcaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagctcccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaaaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcacccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +atattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308003.1/1-7512 |Norovirus GII isolate 066_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctcgctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagagaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggggaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccgacaaagatggttgcctaaaacccaga-- +-gat----aaggaag---agtttgtcctctcatccgagaacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctgaggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgtatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaatgccaagagtatggacctgggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaaatttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggtcttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccattgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaatgttgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcacctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggtcaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaaaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaaccaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggagcact---------------------------------g +ctgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttcaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +atattcgtaagcgaggggagtcacg--------cgcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308004.1/1-7506 |Norovirus GII isolate 068_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctcgctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcacaactctcaactgtgtccatcagcccatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaattgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacagatggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaga-- +-gat----aaggaag---agtttgtcctctcatccaacaacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttaaaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgtatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcactgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaaatttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccattgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccccgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgcagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaacaatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcacctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ctgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttcaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308005.1/1-7403 |Norovirus GII isolate 074_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------agcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacggggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcattgtgagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttccggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagagctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacatgacatgtggaagaacgctttcagtcctgacttctcacacataaagctgt +cgttggctacacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaaccagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtcccatcgtactcctcatcactgggccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctttcggcttggtcacaggctctgaaa +tcaggaagaaaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaattgggtgaattctgccggttgagattcccaaagccaatc +agaactggtgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcctgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgacggaccacctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttttggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cccatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aatctaatgtttgaggagggaaagaacatgactccaatctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttggaaaattggagcaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgcagatccatttgaaacaatgataccacactcc +ttaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttacagcaaactt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgaacatgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagagatcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaagcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cacactattaggttgatagcaatgttgtatacatcacttaggcctaataatgc +gggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgagagaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgcctgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcgtctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggcaaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ga---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308006.1/1-7505 |Norovirus GII isolate 078_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccccagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagagttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgaaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactacg +aggaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttggagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgggctcaagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctcttggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308007.1/1-7505 |Norovirus GII isolate 079_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagttctgacttctcacacataaaactgt +cattggctccccagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagagttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacgatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactacg +aggaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttggagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccccgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgggctcaagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctcttggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308008.1/1-7512 |Norovirus GII isolate 083_GII.Pe_GII.4_Barra do Ouro nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgtcgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactacaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggcctttgcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggtcagagacaggtactctt +ctatggagttggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggttggtttggaaaactggaacagagttca +attctcagacaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcatgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcgtctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308009.1/1-7506 |Norovirus GII isolate 087_GII.Pe_GII.4_Silvanopolis nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggccgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagattcc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccgggctgcctgagcttaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgttcccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccaagtgccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaatatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaactaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggacttatcccacgcaatggtgt +cgatcattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaagagcttgccgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgtatcgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgaaacaagatgcttgcttttagacagcttgctgctgaaaacaagt +atgggctgatagacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtactctt +ctatggaggtggccattaccatggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggctccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgggcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggctcctgtggggttcagatctggcgaccatgatacgatgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgaacacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaactcctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatcctttcaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgcttttccatccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308010.1/1-7512 |Norovirus GII isolate 102_GII.Pe_GII.4_Sao Vicente nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---agcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaagctgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagtgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacagcaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgccc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308011.1/1-7403 |Norovirus GII isolate 109_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------agcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggaggaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcaaccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttccggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggaaaaagccagaaaactctcaaccaaatctgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacatgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgttggctacacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaagaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtcccatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattaccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctttcggcttggtcacaggctctgaaa +tcaggaagaaaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgattataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +cttcggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgacagaccagctaaagccattcacagaacccagagga +aaaccgccagagccaaattttttaggggctgcaaggaaaaccatcaccaatgtccttgggaagaaaattgtt +ccaccccaaaaatggtcatttggccaagcttgcgcatccctggacaaaacctcctccagcggccacccccac +cccatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaatcatgaggatccatttgaaacaatgataccacactcc +ttaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctcagcacatgggagggcgatcgcaatcttgctcccagtggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaagcaactagaacctgtgttgattcccttacccggtgttaggaataatttctatcatta +taatcaatcaaatgat---cacactattaggttgatagcaatgttgtatacatcacttaggcctaataatcc +gggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtcccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgagagaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgcctgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcgatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccaccccc--------- +ga---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttcaattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308012.1/1-7512 |Norovirus GII isolate 123_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccagggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaaattgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaaaatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaatcacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cgctcaagaacatcgcgatcaagaagtgccaaatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggtcagagacaggtactctt +ctatggagttggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactggtgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcccctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccggggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aatctaatgtttgaggagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggagcaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaggacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagagatcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcggccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaggcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ttaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308013.1/1-7427 |Norovirus GII isolate 131_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +--------------------------------------------------------------tttctaacat +ggctgtcacttttaagcggc----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattgggc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatatactcccc---agtatctcatctctccatacactcttaggagtttacattgtgactcatt +cccctacactgcattttacaacagttgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactctgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgccccattgctaggtgattatgaactgcaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagctcttggtgcatacggattggaaatcttaaaattggt +catgaagcggctcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagctgctggagagctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +gcacctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgcgccaccccatcca +gggtgcccttaggttgcaggagcttgcttacacatcccccttcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatccgggttactccatgagaggctagatgtggacacaatgaaaggcc +cggccctcaccactttcaacttggaaaacagcccgatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcactttgtgaatcatctagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatgatcc +aaatcgctggggctgcattcgtcaccacgcgcatagcgatgcgcgtga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccgatcgtactcctcatcacagagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtacctccaggacagagacaggtactacg +aggaggtggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagccgtgggctgatgatgacagaagagttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgaatacaaaattaacccatatcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattgtgccgcttgagattcccgaacccaatc +ggaacggacgtggcgggcatgattctagaagaaggtgcgctcgggggaaccgtaggagcactgcccatttgc +cctccaactggtgcgcccctgaatctttcagttagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgtaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacacgttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaactgtgttgggagatgcaaggaaaaccatcatcagtgtccgtgggcaaacaattgtt +gcaccccgaaaatggtcagttgcgcaagcttgcgcatcccttgacaaaacctcctcctgcggacaaccacaa +cacatgcggaaaaacgactgttggaatggggggtccgtcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaagttctctc +ctgaaccacacct-gggccaggtagtagcagacgacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgatgtcagggacaggtcccgtgacttcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacacgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgcagatccatttgaaacaatgataccacactcc +ccaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagccaactc +tgcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctcagcacatgggagggcgatcgcaatcttgctcccagtggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctga---tgggtccgctgccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcgcgttcggccagaaagtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttactcggtgttaggaataatttctatcatta +taatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattccttcagaggagatgtcaacgggtcacagcagtggctttgttgtccaaccaca +aaacgataggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcagcaactgtacctt +acgag-----------------------------------------gagatgttccccaca----------- +-----------tcacaag------------------------------------------------ta---- +-------gctgga----------------------------------gttacacg----------------- +----------------atgaatttggtttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgtttgctcccaag +ttactcaggcaga-aatact------cataatgtgcatccggcccccgctgtagccccgactttgccgggtg +agcaacttctcttcttcagaaccaccacgcccg------gatgcatcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatggatgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagcttaaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacgtgtgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +ataaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctacc------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtggaggctca +gagtaggaatttgtcacctttcatga---gggggccccacaacatatggtttgtcaccccaccagatagcag +atcccct---agcc------------------------------acggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308014.1/1-7512 |Norovirus GII isolate 137_GII.Pe_GII.4_Nova Olinda nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaaggg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggaggatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggggaaagccagaaaactctcaactaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtataatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggctttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaggtacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaacagatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcttacctcggtggcaaagacccc +agagtcaaaggtggcccatcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagaagaaaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaaa +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccttctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agttgtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttgttacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctacataa +atcaggctatgttacagtggctcacactggcaaacatgatctggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctacc------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctctcgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308015.1/1-7512 |Norovirus GII isolate 149_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaaaccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttttg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaacttcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cgctcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtactctt +ctatggagttggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagaccct +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagagga +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaaa +accgataaaatttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggttgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaagaacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cataatgtgcatcttgcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaggcgtccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308016.1/1-7506 |Norovirus GII isolate 158_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggaggatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtataatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggctttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggtcagagacaggtactctt +ctatggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaggtacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaacagatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcttacctcggtggcaaagacccc +agagtcaaaggtggcccatcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccttctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agttgtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttgtcacgagaccatcccccgattttgatttcatatttct +agtcccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctacataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaattttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctctcgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308017.1/1-7512 |Norovirus GII isolate 159_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagca----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtattcctcatcactgggccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtactctt +ctatggagttggccattaccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccggctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcatgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcctttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttaaaactgttgagagaatggccag +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcgcctgagtaacttgggagcacccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308018.1/1-7512 |Norovirus GII isolate 160_GII.Pe_GII.4_Agua Azul do Norte nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaagtaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggattgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccggacactcttaggagattgcatggagagtcatt +cccttacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaagttaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggatataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagattgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattattaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgctgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacaactcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaacttgccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggctaacaaagatggttgcctacaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcagaaagggaaagaaca +agtctcatcgtactcctcatcactgggctttttcaagtaaaggactcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggtcagagacaggtactctt +ctatggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaatgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggtccttcattgcagcaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtattggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccacctcaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaactacctccagcggccacccccac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggctgatcaagcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccgcacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagtacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgtacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatttgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccggtttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cccaatgtgcgcctgagtaacttgggagcacccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaac------------tcttcaactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308019.1/1-7512 |Norovirus GII isolate 181_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaaaat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggc----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattgggc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatatactcccc---agtatctcatctctccatacactcttaggagtttacattgtgactcatt +cccctacactgcattttacaacagttgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactctgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgccccattgctaggtgattatgaactgcaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagctcttggtgcatacggattggaaatcttaaaattggt +catgaagcggctcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagctgctggagagctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +gcacctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgcgccaccccatcca +gggtgcccttaggttgcaggagcttgcttacacatcccccttcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatccgggttactccatgagaggctagatgtggacacaatgaaaggcc +cggccctcaccactttcaacttggaaaacagcccaatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcactttgtgaatcatctagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatgatcc +aaatcgctggggctgcattcgtcaccacgcgcatagcgatgcgcgtga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccgatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtacctccaggacagagacaggtactacg +aggaggtggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagccgtgggctgatgatgacagaagagttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgaatacaaaattaacccatatcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattgtgccgcttgagattcccgaacccaatc +ggaacggacgtggcgggcatgattctagaagaaggtgcgctcgggggaaccgtaggagcactgcccatttgc +cctccaactggtgcgcccctgaatctttcagttagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgtaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacacgttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaactgtgttgggagatgcaaggaaaaccatcatcagtgtccgtgggcaaacaattgtt +gcaccccgaaaatggtcagttgcgcaagcttgcgcatcccttgacaaaacctcctcctgcggacaaccacaa +cacatgcggaaaaacgactgttggaatggggggtccgtcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaagttctctc +ctgaaccacacct-gggccaggtagtagcagacgacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgatgtcagggacaggtcccgtgacttcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacacgtgatccagctggctggtttggaaaattggaacagagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgcagatccatttgaaacaatgataccacactcc +ccaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagccaactc +tgcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctcagcacatgggagggcgatcgcaatcttgctcccagtggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctga---tgggtccgctgccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcgcgttcggccagaaagtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttactcgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattccttcagaggagatgtcaacgggtcacagcagtggctttgttgtccaaccaca +aaacgataggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcagcaactgtacctt +acgag-----------------------------------------gagatgttccccaca----------- +-----------tcacaag------------------------------------------------ta---- +-------gctgga----------------------------------gttacacg----------------- +----------------atgaatttggtttctcagaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaacg--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgtttgctcccaag +ttactcaggcaga-aatact------cataatgtgcatccggcccccgctgtagccccgactttgccgggtg +agcaacttctcttcttcaggaccaccacgcccg------gatgcatcgggta------cccca--------- +--acatggatttggactgtctcctcccccaggaatggatgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagcttaaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacgtgtgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +ataaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctacc------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtggaggctca +gagtaggaatttgtcacctttcatga---gggggccccacaacatatattttgtcaccccaccagatagcag +atcccct---agcc------------------------------acggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308020.1/1-7512 |Norovirus GII isolate 186_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------ttgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgaaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtactctt +ctatggaggtggccattaccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggctccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggtcttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgaaggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttcttacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggcaaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcgatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctgttgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +atattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308021.1/1-7506 |Norovirus GII isolate 191_GII.Pe_GII.4_Tocantinia nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgtcgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaaggg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggctttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggacagagacaggtactctt +ctatggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggttggtttggaaaactggaacagagttca +attctcagacaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcgtctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctgttgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +atattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308022.1/1-7506 |Norovirus GII isolate 235_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttccgctgccgctgtcgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacactcccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgccccattgctaggtgattatgaactacaaggacctgaggaccttgtagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcgcgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaggcccctgaggtggagaaggcga +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgctggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgaaagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaggggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccagcaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---aatttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctcatcgtactcctcatcactgggcctttgcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttccggtcagagacaggtactctt +ctatggagttggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaatccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccacggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +aggccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccactcaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccgatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcactgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatgctaagatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactttctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggttggtttggaaaactggaacagagttca +attctcagacaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagccaactc +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcatgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcgtctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN308023.1/1-7469 |Norovirus GII isolate 243_GII.Pe_GII.4_Araguaina nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------------------------------acagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttttg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacgacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattacgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctagacctcgaggcaattgaaaacaactacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgaygccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cgttggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaacttcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacagg +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactggccggtgccc +tacaccacctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgttatccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtccaaagcacacagccttttcaagcaaagggctcagtgatgaggaatacgatgagtaca +agagaattagagaagaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtactcct +ctatggtggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaggccaaaatccggcaga +gaatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgattgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttgggagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccccac +cacatgcggaaaaacgattgttggaatggggaatccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcattccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtggttgcagaggacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacatgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatc +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgaacacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttaaaactgttgagagaatggccag +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgtacgactgatggcgtgctcctgggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgttacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaagaacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgatttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tggagccaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcgcctgagtaacttgggagcacccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtcctaggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacaaaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgaagctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctct------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggagtttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN248514.1/1-7541 |Norovirus GII isolate 2 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctatcaaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaattgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgacggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaactcttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcttgcaaagatttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +tctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcttcctcgccagacattgt +cggcactattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaagctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtggggctagtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcagacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagtcgaggaccaaacatcccagactgcgaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaaaaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccatcgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagagaaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaaggaactcttt +ggagttgagatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccggatgtcacagggctcgtgctggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaagcagtccttgagggaaacgag +aaccatggcacttactgcggcgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcccgcctacttgggaggtaaggacccc +agagtagaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctggagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aatatgaatgaagatggccccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagattgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaatccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccactaatga +ggttatggcacttgagccggttgtaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagctcaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctggatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctagttagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcctca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tcctgattt---cgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggttccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgttaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgccccctaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgacttcaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtatttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactctaccc---cgttctgaayc---------------------------t +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cagg--------gt +ctagctc----a---tctag-------------------gacaacaccctctt---------ctgcagtatc +ttccac-------------------cct--------------atctaggattagtgactgggtgagagggca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MN248515.1/1-7546 |Norovirus GII isolate 3 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctwwcaaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaartcggaaaytgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacaraccagccgctgaaccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgacggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaactcttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcrtaggaatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcttgcaaagatttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +tctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcttcctcgccagacattgt +cggcactattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaagctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggcagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtggggctagtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgrcagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttrttcatgagaggagagacgagtttcagctccagggga +rcgaccttcagacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagrgtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacaraaactccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagtcgaggaccaaacatcccagactgcgaaygaagtgggtgcagcar +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggya---ratgggagattgaacccaaggacacagaaccagaaggtaaaaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccatygaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaarataagacaaa +gaatctttcgccccacaaagaagcagagaaaggaagaaaggggggtgcttggtttggttryyggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaaggaactcttt +ggagttgagatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccggatgtcacagggctcgtgctggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatctyggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgkccacaccgcagca +gcccggggaggcaacactgtcatatgygccactcaggggcaagatggggaagcagtccttgagggargcgag +aaccatggcacttactgcggcgccccaatcttgggyccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcccgcctacttgggaggtaaggacccc +agagtagaaaaaggaccatccctgcagcaagtcatgagrgaccagctaaaacctttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctggagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggcaaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gcyagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccrtgtagggtaggaatg +aayatgaatgaagatggccccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcrgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggkctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagattgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgarggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaatccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcargatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccactaatga +ggttatggcacttgagccggttgyaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattgr +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggwaaaatcat +ctttgccgccgtcccaccacatytmcctgttgaraacattagtgcagctcaaatyacaatgtgcccccatgt +aatygttgatgtaagacagctygagccagtgcttttgcccctccctgacrtaaggaatagattctttcatta +taatcaggaaaayacc---ccccggatgagacttgtggctatgttgtayacaccccttagakc---aaattc +tggtgatgatgtgtttacggtgtcttgcagagttctgmcccgccctgsccccgactttgatttcacgttttt +ggtgccaccaactgtggagkcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacacygaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcacyctggatggaacacttcargggaccacccaactggtacccmcccaaatttgctcctt +caggg-----------------------------------------gcacgctarttagccag--------- +----------acgtcgaggkct------gc----------------------------agattcaacag--- +--attcagccyca--------cgggtgaggr----------------accaccct----------------- +----------ctccacgttcagctgaagmacctcgatgggacaccayatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggrg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaacyctagatataccccaaagcttggctctgtgttgat---gy---------attctgaatc +tyctgattt---cgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctyact------cttaayatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagaggttccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgttaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgccccctaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgmcgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtaygacttcaayaaacag--- +------------------------------ctccaattrgcatccttcaaacatgacaaagagatgctgcag +tcrcaagtactggccactaaacarctccagcargagatgrtgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtatttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctacyyyaccc---cgttctgaayc---------------------------t +ccaa-------------------aaatyaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgydtctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cagg--------gt +ctagmtc----a---tctag-------------------gacaacaccctcyt---------ctgcagtatc +ttcmac-------------------cct--------------atctaggactagtrrmtgggtgagagggca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacarcttttgtcacaccaccatcgagcaa +ggcttca---tcay------------------------------atgggk---cggkctcaaccgttcccaa +agctgttttgga-ctcctggrctcctatgt------------tyaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN248516.1/1-7546 |Norovirus GII isolate 4 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctatcaaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaattgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggccytgctggtgagaagtt +yccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgacggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaactcttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcttgcaaagatttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +tctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcttcctcgccagacattgt +cggcactattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaagctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggcagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtggggctagtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcagacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagtcgaggaccaaacatcccagactgcgaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaaaaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccatcgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagagaaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaaggaactcttt +ggagttgagatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccggatgtcacagggctcgtgctggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaagcagtccttgagggaaacgag +aaccatggcacttactgcggcgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcccgcctacttgggaggtaaggacccc +agagtagaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctggagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aatatgaatgaagatggccccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagattgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaatccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccactaatga +ggttatggcacttgagccggttgtaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagctcaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgmccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctggatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctagttagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcctca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tcctgattt---cgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggttccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgttaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgccccctaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgacttcaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtatttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactctaccc---cgttctgaacc---------------------------t +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cagg--------gt +ctagctc----a---tctag-------------------gacaacaccctctt---------ctgcagtatc +ttccac-------------------ccy--------------atctaggaytagtgactgggtgagagggca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MN248517.1/1-7546 |Norovirus GII isolate 5 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgcccctyctatcaaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaattgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacrraccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccacaccagtcttggaataggaaacccct +tccaaccgttgatgacggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcattgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaactcttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgra +gcttgtccccgtggtcatgggtggcrtaggaatggttctcggctttaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcttgcaaagatttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +tctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaaaactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcttcctcgccagacattgt +cggcactattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaagctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggcagacctggcattggyaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtggggctagtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggsatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcamgggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcagacatataactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagtcgaggaccaaacatcccagactgcgaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaaaaagggtaagaaca +agaaaggaagagccaagacaaacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccatcgaggaatacctgcaagaccgggatcgctac---t +atgargaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaagcagagaaaggaagaaaggggggtgcttggtttggttactggctcagacr +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaaggaactcttt +ggagttgagatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccggatgtcacagggctcgtgctggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaagcagtccttgagggaaacgag +aaccatggcacttactgcggcgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcccgcctacttgggaggtaaggacccc +agagtagaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aaaccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctggagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggcmaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggacggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aatatgaatgaagatggccccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagkgtctgccatmaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggkctctcaccagatgttgtccaagcccactcctgtttc +tcattctacggtgatgatgagattgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagwatccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgrcctcrgcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccactaatga +ggttatggcacttgagccggttgtaggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctawatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagctcaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgatgatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgatttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacacygaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcrctctggatggaacactycaaggraccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctagttagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcctca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggkgtygctaktcaaa---gaaacaccacagggrg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tcctgattt---cgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagaggttccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgttaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgccccctaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgacttcaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtatttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacctactcyaccc---cgttctgaacc---------------------------t +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cagg--------gt +ctagctc----a---tctag-------------------gacaacaccctctt---------ctgcagtatc +ttccac-------------------cct--------------atctaggactagtgactgggtgagagggca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK396771.1/1-6079 |Norovirus GII isolate Hu/KH/2015/GII.P21-GII.21/ETR-NV-050 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------ggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgaacctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgaatatgagctacaggggcctgaggacctcgctgtgga +actcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacarggagggctgtccaaaacctaaa-- +-gat----gacgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagcgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgtcggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagtatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttcaaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggttgagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gctcaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcacacaatctttgaggccaaacggcatag +gcagggatttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcctttatagcaggattggctggtgacatgctcac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK396778.1/1-6788 |Norovirus GII isolate Hu/KH/2016/GII.P16-GII.13/ETR-NV-372 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------gatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagtttgagagaaaacagggaggccaaggaaccgct +gacgggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaagggcctagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaacgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatattgaacatcctagyaacgtgcgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttctttccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaycagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctaatcgcccgtgcatcaggcttactgcatgagagratggatgaatttgaactccaaggcc +ccacaatcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaaccaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaaaaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaagcatgccagaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcctctaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +acgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaagatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacacctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggrcatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaaa +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-ctcgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cggagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agcaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattttattaaatttagagctgggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtggatatgatcagcccagctcaaattaccatgcttccccattt +gattgtagatgttaggacaytggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctattatcaagtgcagtctgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---ataatgtgagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtgggaaattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaataccccc---------ttccagcaatgggtcctaccaca +ctacgcaggtgct-cttgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgtttttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgayatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgctgcag +gcccaaattgatgctacaaagaaactccagtcagagatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagttaacgccccaatga----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK355712.1/1-7406 |Norovirus GII isolate HU/GII.P16_GII.12/AlbertaEI464/CA/2018 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aat---------------------cccccaagaccactaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaagcagggaagccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctctcctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcggcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcgatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattggtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +agaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttccctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaagaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaagggaacatattgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcgcttgacaaaacaacctctagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattctagataccaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccccgaacagttaaccaccaaattg +aaggagtacggcctaaaaccaacccgcccagataaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggccccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtgcaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagtcttattgcctctaccagatgtcagaaatagcttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaatgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgacccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattacacag +gagtggttacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaacagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattacaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatc----------------- +-------------ctc-----cttcttcagt------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +gtcctc---------------------------------------ccgaattagtgagtgggtacgtagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacacctgcgt------------ttaacac----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK355713.1/1-7406 |Norovirus GII isolate HU/GII.P16_GII.12/AlbertaEI482/CA/2018 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aat---------------------cccccaagaccactaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaagcagggaagccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctctcctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcggcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcgatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattggtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgbtgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttccctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaagaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaatcttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaagggaacatattgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaacaacctctagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccccgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggccccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagtcttattgcctctaccagatgtcagaaataacttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtttcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaatgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgacccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattacacag +gagtggttacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaacagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgagaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcacgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +gtcctc---------------------------------------ccgaattagtgagtgggtacgtagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttcg---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacacctgcgt------------ttaacac----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MN199033.1/1-7565 |Norovirus GII isolate CAU140599 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagtaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctaaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgaccgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcagaccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgatttcctcgtgtacgcagaagctcctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgccc +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aaccgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgaaggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatctttaggccaacaagaaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaaactgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcattaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcttacctcggcggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +agaccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgttggaacggggagtcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccaggtataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagtgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcggcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagaaataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatgggcgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------actagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcactagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgttcccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttgtagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ttgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggccta--------------------------------cagctgctagctcgttac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +gaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attggatttga-ttt- +--------------gga---accttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MN038126.1/1-7374 |Norovirus GII isolate Hu/US/2017/GII.P7-GII.7/CA-RGDS-1042 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +----------------------------------------------------------------------at +g------ac----agtaacaacgccaccccttctaataaagaagwggt------tggtgcattctccaacat +aaaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcagcattgccccacagtcaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattggattgccggacttgacgacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggaacacagaccggctactgaaccact +tcctggcacaatattggaaatgtgggatggtgagttttaccactattccgtgtacgtcagcgacggcaaagc +tctgggggtccacaagccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---actacttggtctccccggacacattaaagggtctcgctggtgagaagtt +tccctatacggccttcagtaacaactgttataacttttgttgttgggtgctcgagctcaacgacacttggct +taa---cagaagatgcatttccagaactaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggttcattgttctc +aaaaccaatcaaggacctgttaggtaaacttaagccattgaatctgctgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttttggaccccccc +agatgtctctaattttgtagcctccctgataggtgattttgaattgcaagggcctgaggacctagctgtgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggtttcaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagagggctgagatggaaaccttgagggcgattgaagatgccgt +cctagatatggaagccatagggaacaaccacctcacaaccctcctcaaggacaaagatagtctcacagcttt +catgaagactctggatctggaagaggagaaggcgaggaaactgtccactaagtcatcttcaccggacatagt +cggtaccattaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggactaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttagctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactatggcatggggagccccgttaa +ggacgctctaacactacaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagagattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggaaccatgcgatccctta +cccagggatccctgactgcgagagttgcaggtcttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgataccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggagacaatgagagtgggtgcggcgctcaagaatgtgaagaccctggaagaccttaaaattg +cattgagggacgtaaaattcaatgagtgtgaaataatctacaagaactctaagtaccgggtatcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaggcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgataccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggtaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagggaagagaggaatgggaagtactccattgaggaatacctgcaagaccgggaccgctat---t +acgaagaggtggcagttgcccgggcgacagaggaggacttttgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagata +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccagaagcgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttagcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgctcctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacattgttgtcgcaggtgttcataccgcagca +gcacgaggaggcaacactgtcatatgtgccacccaagggcaagatggggaagcagtccttgaggggaatgag +gaccttggcacctattgtggcgccccaattttgggccccggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttaccacctggcacatatgaacctgcttacctagggggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagagatcagttgagacccttcacagaacccaggggc +aaaccacctaggcctgcagttttggaggaagccaaaaagacagtgatgaacgttctagaacaaaccattgac +cccgccaagccatggtcctactcgcaggcatgtgcctcactggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagtcctttactggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctgtgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtacaggtaccactatgatgctgattat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgacgttggcgatttt +atcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactctgagtgcaatggcagaagtgtcaggtctctcaccagatgtcgtccaagctcactcttgtttt +tccttttatggggacgatgaaatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtatggtctagttcccactcggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattcctccgtaggtcaattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagttgtactggacaagggggcctaaccacgagaacccatacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtccccagttttacaagaaagtt +agtaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---cgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaagtaattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattcccctgg +tgaaattctgcttgatttggagctgggaccagaactaaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgctggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagagccagttttattacctatgccagatattagaaataatttcttccatta +caatcagggcgacgac---ccaaaattgagactgatagccatgctctatacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagttccagtggagatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgccacg--------aga-----------gcccatgaggccaacat +taacactggtggagaccagtatgctcccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---tgaggtgcaccagcccacag---------------------------tttttaccccag- +--------ttggtgtggcaggcg---acacct---------cccacccttttagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaatacccacttggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctaccaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagttgcacaa +gcaaggctttataaccgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gattc---------aataatggctagtgctttccttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattacaataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagctaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggt +actagatattgggcgcctggtgctatgagaacaacaggctattcagggacttttactcacttgccccctatg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +ccaaaata--------------gacaatcccttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcaagacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cggccagacc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcgtca---aatg------------------------------ccagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------tcaacactcacaggcagccac--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK934772.1/1-7559 |Norovirus GII isolate 2015HN08, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------ggtgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK614124.1/1-7536 |Norovirus GII isolate SZ2017184 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagagag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcttgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctccattactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaaat +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtataaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataaaagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggtatccccat +cacgtccgaaagaatgaattttggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccatttaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgatgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcagccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614125.1/1-7536 |Norovirus GII isolate SZ2017203 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgatcttgagagaaaacagggaggccaaggaaccgtt +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaaggaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgatatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggcgagagagtcgtgctgtgggacgattatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggttaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccaggtacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atcttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcatgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactcccagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggcgtgcctgacttccaggaaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtaaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614126.1/1-7536 |Norovirus GII isolate SZ2017211 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagataaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtgagaaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagtttcaagggccagaagacctcgccgttga +gctcgtacccgtggtaatgggggggattggtttggtgcttggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgacagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaacaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaactcataataattacaacaaaccttgccaatcccgccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccactcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcggca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacagcagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacaacaaatcaccatgtttcctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cttcacatgg------cacagccttatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614127.1/1-7536 |Norovirus GII isolate SZ2017223 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaaaat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagataaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtgagaaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagtttcaagggccagaagacctcgccgttga +gctcgtacccgtggtaatgggggggattggtttggtgcttggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +-aactttgaggcctgtttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccactcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcggca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacagcagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacaacaaatcaccatgtttcctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cttcacatgg------cacagccttatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614128.1/1-7536 |Norovirus GII isolate SZ2017252 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggctaaggagccgct +aacaggggcagtactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---agtacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatctcggtgcctatggcttacagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggatatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acattcaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------ggcg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaaaggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagatcagttgaagcctttcactgaatccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatttgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaattccatcgcacattgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactagacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagcca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatataaaccttgccccttctgtcgctccagtatttccaggag +agcgcctgctcttctttagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgttggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagtttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccagctctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614129.1/1-7536 |Norovirus GII isolate SZ2017278 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggagtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccctaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcgtcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaatcctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacttgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttggcggtggagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacgtgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtcagctttggttctggctggg +gcttctgggtgtcac-caagcctcttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgctgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagatcaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacattgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccttgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagactatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcttctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ttatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggcatcgtctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgactgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtaaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctactgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtactgggcaccaaactccatgaggactacatcttattctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagtcggcct-tc--------gagtgg---------------- +------------------------------atcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtacctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614130.1/1-7536 |Norovirus GII isolate SZ2018028 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttagtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcgacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccctattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgctaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaagcccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaatgatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatttgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaattccatcgcacattgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactagacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttctttagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccagacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaagtttacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgatttga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614131.1/1-7536 |Norovirus GII isolate SZ2018039 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gaatgggatctttggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgcgttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctggctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgagtctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaagctgtgggccgatgacaacaggagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaagttcagattcataaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcggcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacattgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaagggcggtgactcgtgacccagctggctggtttggaaaactggaccatagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggcgctgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtaccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgacgttaggaataacttcttccatta +taaccagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgagattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataagcacaatag +tcct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacctacacagcacagtacaccccaaaacttggacaaattcaaattggta---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggttcctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgctccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtttcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------tagaactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +agcatct---gat---------------------------------ggaa---cagtctcaaccatccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614132.1/1-7536 |Norovirus GII isolate SZ2018046 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagaatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggctaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcttggcaacgtgcgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcactaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatctcggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacgaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acattcaagaactctggt +cgaagcctcaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaagacatcaaggaggaaggaaagaaaggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagtaaggccttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccatatacaaatgtcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatttgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactagacggggagctccaagggacaacacaactccaagtcagtggcatctgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagagtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacactagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614133.1/1-7536 |Norovirus GII isolate SZ2018068 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtctttcaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggtgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggctatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtatgataaggccagtagttgttatgatatctggcaagccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacgatggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaggagagaaatgggaagtattctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaccaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcatcggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggt +aaacctccaagaccaagtgtattggaaacagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaactgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaaattggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtttcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagcgtccatagaccagatgtataccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +taagg-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagagtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccccacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggttttatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgtc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------ac +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614134.1/1-7536 |Norovirus GII isolate SZ2018069 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gaatgggatctttggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgcgttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctggctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgagtctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaagctgtgggccgatgacaacaggagtgtcgact +acaatgagaaactgaactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaagttcagattcataaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcggcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacattgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaagggcggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggcgctgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtaccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgacgttaggaataacttcttccatta +taaccagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgagattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataagcacaatag +tcct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacctacacagcacagtacaccccaaaacttggacaaattcaaattggta---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggttcctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgctccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtttcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------tagaactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +agcatct---gat---------------------------------ggaa---cagtctcaaccatccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614135.1/1-7536 |Norovirus GII isolate SZ2018097 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaaggccaccaactcccgagttggtc-------aagaagatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggagactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaagatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattgggtgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgctaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaaagggcaaaaca +aaactggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaagctggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacgccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgctgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggagacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggccataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614136.1/1-7536 |Norovirus GII isolate SZ2018122 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgctttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +acttgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcttggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +aacttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacagttggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatcttaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcattctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------attagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagtgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttaaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtaagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgct-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctattaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcacctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcctc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tatttg +g-gattaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK614137.1/1-7536 |Norovirus GII isolate SZ2018139 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttgttatgttatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcttacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcatagtaattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggacggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattaccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaacga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttccaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacaccgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgcggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccgtcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacacacaggcgtgtacctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcaccttcctccaaaggacggtgacacgtgacccacctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaagtc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagctccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctctccccggaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---tggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaacaacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactaggccttcccctgactttgaattcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtctccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaga---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggagacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cttcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MK789430.1/1-7536 |Norovirus GII isolate 3453 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +gtgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggagccgtt +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +attaggcgtgcacaagccaccggctgccattagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagcaggactactggcttttttaggccctaccaagagtggaacaggaaacccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgattg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatgggctggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcatcccctgacattgt +tggcaccataaatgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtctttgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +taactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgctctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ccgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtggacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgtcagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgaaatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaaatgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccctaaacctaga-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggatagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagatccgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagttttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggaataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaaggatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacgcct +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactcccacccggcacatacgagccggcatatctggggggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aaaccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaggtggacgtacgcgcaagcgtgcgcatctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggagtctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgactccagtttacacagctgcccttaaggacgagttggtcaaa +actgagaaggtgtatgggaaaataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctggctgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctcccaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgtgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaaaggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattttcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaacattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatctagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgtcttactaccacttcctgatgttaggaacaatttcttccacta +caatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgctgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtagaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaacttcaagtcagtggtatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttgcacga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaagacatccctgc +ccctctgggcgtgcctgattttcagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----agaatagccctgggcacaatg----aaccagc----aaacaggggacacgatgctgtggt +tcctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtgtttccaggag +agcgcctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggccgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgttaatgcgcccatgacacaggcgctggactggaacggt +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgagac----------------agaccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcaatcttcgaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgattgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------c-----tttt---accttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MK789431.1/1-7533 |Norovirus GII isolate 3351 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------tctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactacgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgctataatcataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggtaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtctggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagcctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttc +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacttatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggacacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaactcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-taagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagttatatctgaacttaaagagggaggaatggacttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacactt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtgagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtggat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-ctcacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgcacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatatcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK789432.1/1-7558 |Norovirus GII isolate 3587, complete genome +----gtggatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccaggggta +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaagaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggatatcataggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggagtaggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcaggcagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagagttggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaagttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttggacttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggtgtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgctcctgaaggcactgttgtgtctgttctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcctagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatctatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactgaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tccttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgagggaccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactct +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactaagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgaga---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgacgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagcctacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-ctcacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagatgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcatag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgagtgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaataaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------gat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaa------------------------------------------- +------------------------------------------------------------------------ +- +>MK789433.1/1-7542 |Norovirus GII isolate 3618 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagcgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acctccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaacagtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgctatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggatttttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +taggcccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---gggatgttctggacaccccc +agacgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +gtcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaatgctttattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagagttggctgacacctgtcccctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgtttgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccggatatgtggaaagaccatttcagatcagacttctcgcacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaactttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccatggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtgcaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggcgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---accttactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggagtacctccaagatagggacaggtac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaaaaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtccattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaagttgagcacaaagacaaaa +ttctggagatcctctaacgcaccgctccccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttataccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctatggggctctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctataagagttggtatg +aatatgaatgaagatggtcccataatatttgagaagcactctaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttt +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagaaaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaattcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggcccacttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcccaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgcca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------atcaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtggat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccaaccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaagttgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +cgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagctctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagcaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggtgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggaa---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK789434.1/1-7540 |Norovirus GII isolate 3546 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggacgaaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaacccccagctgccatcagcctcgctaaggttgagttagcaccactttccttgtactg +gagacctgtgtacactcctc---agtaccttatctctccggacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcctt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagaaaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgatatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcagggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagggaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacgcca +ggtgattgtggctgcccctacatctataagagaggtaacgactatgtggtcattggggtccacacggctgcc +gcacgcggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagtcatgagggaacagttgaagccattcacggagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaagatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcattgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccctatcatctttgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggcctcccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +aaagaatatgggctaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agtaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggctagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacctacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctagccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaactcctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaactccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgttactt-------------------- +----------ctgtgc-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----c--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK789435.1/1-7569 |Norovirus GII isolate 3549, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +agg---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggttgcctgagctcaccactgtcagacaacc +ggaggaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggttttagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgctctttgtcttcactattcac +taggcccatcaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttgaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatataagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgattaagaagtgccagatagtgtacaatggcagcacctacacacttgaggccgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------aatgaccaacaaagatggctgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaaggtaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaaatactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgaaaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttctc-ccagtctatttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaactatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaatgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggcgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagatctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggtgaggctgcgctccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagcctatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaacttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggagatgatgtctttacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagtcgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacgga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgcagg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------aa +taaatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggtgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MK789436.1/1-7536 |Norovirus GII isolate 3552 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaatcacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaatgg------agaggacgaaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaacccccagctgccatcagcctcgctaaggttgagttagcaccactttccttgtactg +gagacctgtgtacactcctc---agtaccttatctctccggacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcctt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagaaaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaaatctgcctcacccgatatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgttgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcagggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggacctatggt +ccaagccacaagtggaaaacacagagga--------gactatcagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagggaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggtgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtaccacgcca +ggtgattgtggctgcccctacatctataagagaggtaacgactatgtggtcattggggtccacacggctgcc +gcacgcggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagtcatgagggaacagttgaagccattcacggagcccaggggt +aagccaccaaagccaagtgtgttagaatctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaagatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcattgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggtcctatcatctttgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggcctcccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +aaagaatatgggctaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agtaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggctagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaattaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacctacagttgaatctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctagccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccctacttttccgggtg +agcaactcctcttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaactccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactgatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ttaac------------tcttctactgttactt-------------------- +----------ctgtgc-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----c--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK775028.1/1-7239 |Norovirus GII isolate Hu/US/2014/GII.P2-GII.2/Summit0246 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------acccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctat---aggtggtgtgtctggcctacctgagctcacaacagttggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggtctgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gaggcctgtttacacgcctc---agtaccttatatctcctgacaccttgaggaaactccatggtgaattatt +tccctacacagcctttgaaaacaattgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---cagaaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccattaaggacataattggcaaacttaaacccctcaacatcctaaacatcctggcctcatgcgactg +gacctttgctggcatagtagagtcactaatcctctttgctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacggattagagatcctgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +gttagacttggaggccattgagaacaaccacatgaccactctattgaaggacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccccgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcacgttccttggttcatagggccaaggaagagct +ctccagcagaccaaggccagtcgtcctgatgatctccggcaaaccagggataggaaagacccatttggccag +agaactggcaaagaaaattgcctcaacactcacaggagaccaaagggtgggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggagagagagtggtgctctgggatgactatgggatgagcaaccccattca +cgatgcactgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcaatcataatcaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacatattaaattgc +aacttgcaccacaaggtgggttcgacaagaatggcaacaccccacatggtaaaggagtgatgaagactctca +ccgccagttcgctggttgcgcgtgcctctggtctcttgcatgagagattagatgagtacgagttacagggtc +cgcccctttcaaccttcaactttgatcgcaacaaaattgcagcgttcagacaactcgccgctgaaaacaagt +atggtctggtggacacgatgaaggtgggcaaccagctcagaaatgtcacgaccatggatgagctcaagaagg +ctatcaaaaacatcataatcaggaagtgccagatagtctatggtggcaacacttacacgcttgaatctgacg +gcaagggtaaggtcgtagttgagagggtgcagaacgccagcgtgcaaatcaataatgagatcgctggcgcag +tacatcaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatttactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttttggt +ccagaccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcagacgatatcaagccagagggcaagaagggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggaatatgaagagtaca +aaaggatcagagaggagaggaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgcgaagaagaagaggttaagattcgtcaaa +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaaaaggaacccagatgatttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcgc-ccagcctcttcataacatcaacacatgtcatacctcacggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgaattctgtcgactgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgactatgagaatacaagggcgc +acagtgggcggccagatggggatgctgcttactgggtccaacgcaaagggcatggatcttggcaccacgccc +ggtgactgcgggtgcccctacatttacaaaaggggcaatgactacatagtcattggagttcacacagcagcc +gctcgcggcggaaacacagtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aataaaggaacatactgcggggcaccaatcctaggccccgggaatgccccaaaactgagcactaaaaccaag +ttctggagatcctccacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagaccca +cgagtcaaaggtggaccgtctctgcaacaagttatgcgagatcaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattattaatgtgctagaacaaacaatagat +cccccacaaaaatggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtgggttcccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcgtcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaagtgtatgggagaataaagaagaggttgctttggggctctgatctggccaccatggtgcggtgc +gcacgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacactccagatataggtaccactatgatgcagactat +t-ccaggtgggactcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaacgaagggttgccatcgggtgtcccttgcacctctcaatggaactccatcgcacattgg +ctccttactttgtgtgccctttctgaagttacagacctctctcctgacattatacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattagatccagaaaagctgacggggaaattg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggtcccctgatcattagtgaggacctgaat +ggcctgactttcctgaggagaaccgtaactcgcgaccctgcgggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccttttgagtcaatgattccacactcc +cagagacccatacaactcatgtcacttttgggcgaggcagcactgcatgaaccatcattttacagcaagatt +agcaagcttgtgatatccgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaactaaatccttatctggcacacttagcaagaatgtataa +cgggtacgccggtgggatggaggtgcaggtcatgctggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaattaccatgttccctcatgc +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgtagggtgttaactagaccctctcctgattttgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaaggaacaacacaacttcaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tgtacaat----------------- +----------------gtcaccatcacgaacttgaatggatccccttttgatccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggcatcatctcccaaa---gagacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacaggggacacgatgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cactgtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acatttcaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtgtttccagggg +agcgcctactctttttcagatcatacatccctc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaggagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgacct--------------------------------------- +------------------------------ccagcacacccagagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgtcactcagtcttcaaggccaactttg +gccacaaccactggat-----cctcacatgg------cacagcttcatc----------aaattcg------ +-------------------------------actcgcagtactaacctctcccaatcaacagtttctagagc +cacatc---------------------------------------tagaactggcgagtgggttagagatca +aaatagaaatttggaaccttatatgc---atggtgccttgcagacagcctttgtcaccccaccttccagtag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttattgc-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK775029.1/1-7503 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Richland0514 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gagtgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagagaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgccccccctcagccaaagggaaaacagggacgctaaggagccgct +aactggagctattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccattagcatagccaaagtggaattaacgcctctctcactgtactg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattttggcctcgtgcgactg +gaccttcgctagcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcactataaatgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaataa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgcatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgccctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +atggactggtagacacgatgagggtgggtaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgccggtgcag +tacatcaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaggccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcgttctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcagaaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctgggtggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgactatgaggatacaagggcgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcgaagagcatggatcttggcaccacgcct +ggtgactgtgggtgcccttatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactcccacctggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagcgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaaacacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgttctggctgcggccatggagatcatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggacctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggtctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaacggtgaattcacagtttctccccgtaatgcccctgg +tgaagtgttattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcttgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggtcatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacattcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagataa--------- +-----ac-----agaatagccctgggcacgatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgcaggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--gtccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagagtttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggttctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggactggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK775030.1/1-7479 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Lake0345 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------ggaatat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcataacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgataataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattaaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +gctcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaagttggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---aggtcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaattggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacagaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaactccttgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtgataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggagcccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaatagtttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaactattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacacccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtattatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccaa +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtagccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctt +agttcattgatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggt +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggtct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtttcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcac------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK775031.1/1-7397 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.13/Butler0349 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------------aaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---cagaaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattgaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgaggaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccggctccacttgactatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcgcctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaactatggaagaactcaaacaag +caatcaggaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttttaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaagcgttt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcgaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaacgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaactgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccaggaacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgaactggtcaag +actgataaagtctatggaaagatcaagaaaagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagacgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggacttactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atactgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---gggaaagatatt +gtttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctttataccccattgagatctaatggttc +aggagatgatgtttttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcaatttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------taggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgaccttccctggtg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtacgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggcacttaccctcttgtggttcccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcaggc +ggcttctccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctataacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---atggagccctgcaaacggcatatgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------tcaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK775032.1/1-7559 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.4 Sydney/Wood0352 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaaccacaa +aag---------------------cccccaagaccaccaactcacgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgttgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccggaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaattcgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaaaggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctgttccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagtctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatatgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatctgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggagcccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgacttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgcggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagagttttgtttgagtgcaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttagag--------------atgc---------------- +------------------------------tgtccccgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttctct----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MK773571.1/1-7412 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.2/CS0003 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +----------------------------------ggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatgtattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgttatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaccaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagtccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaactatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggttt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaagtttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773580.1/1-7369 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Mecklenburg0359 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------------------------------------------------------------------aatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaagctctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcctcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaagcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagagaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcggtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacgcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagagtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcgaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaagtggtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +gggctcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactactcggcgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccgcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacgcaactccaagtcagtggcatctgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatgtccctgc +ccctctgggtgcgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcactccag- +--------ttggactc---------aatgatactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccctcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtgattgtgcctgccaacgggtatttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacgtcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccagagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acc--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773581.1/1-7386 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Mecklenburg0360 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------------------------------------------------------------tat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaagctctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcctcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaagcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggatgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagagaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcggtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacgcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagagtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcgaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaagtggtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +gggctcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactactcggcgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccgcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacgcaactccaagtcagtggcatctgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatgtccctgc +ccctctgggtgcgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcactccag- +--------ttggactc---------aatgatactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccctcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtgattgtgcctgccaacgggtatttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacgtcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccagagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773582.1/1-7346 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Mecklenburg0362 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------aaacagcct-gccccgagaaacaaaccacaa +gag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgatactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaggccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaagccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtatacgctgaggcaccagatgtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaagacacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgtcaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgacgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggcaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgagaaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773583.1/1-7480 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Mecklenburg0363 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacaaaccacaa +gag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgatactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccactaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaggccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtatacgctgaggcaccagatgtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaagacacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgtcaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgacgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggcaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgagaaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773584.1/1-7559 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Olmsted0258, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacggccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgaaaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaagggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgtacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccctaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggaggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgagggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccctagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccactcaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MK773585.1/1-7552 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Olmsted0261 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacggccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgaaaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaagggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtagtgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccctaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggaggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgagggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccactcaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK773586.1/1-7506 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Ramsey0269 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +------gaatgaagat---agcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactcttaggaggctcaacggagagacatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacatttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctattgcatgagaggatggatgaatttgaactccaaggtc +ccacagccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccctaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaggtcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaacgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatccggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacatacaagtggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactaggggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgggcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcctaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctaccatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcgtctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK773587.1/1-7527 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Hennepin0273 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaagccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagagcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcgagaaaggtggcatccaccctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccagaagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaacgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggtaaagtattggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgctattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaagaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataagaggggcaatgactatattgtcattggggtgcacactgcagca +gcccgaggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctacctcggtggtcgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccagaggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggaatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacgcaacagagggcagtactagcaacagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagcgaagatctgaac +ggtctcactttcctccgaaggatggtgactcgtgatccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatatactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcacat +gattatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaacaacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgacccctccgaggatgtccccgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------aga-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggccataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacgtcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----aacacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK773588.1/1-6730 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.3/Hennepin0275 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcctaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaggaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gaatgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattggagatgtgggatggagagatataccactatggcctgtacgtggaaaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccccgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatatttttatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacatgtgactg +gacgtttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggtcggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcggcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgacgctcttcgcatacaagagttggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgctttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagagaatggatgaatttgaactccaaggtc +ccacagtcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaaattggcaatcaactaaaaggagtgaaaacaatggaagaactcaagcaag +caatcaggaatgtgaccatcaagaggtgccgtatcatctacggtggctccacgtatgaccttgaatctgata +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgtatga------acatacaagaactctggt +cgaagccacaatt---ggaacaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagtgatgaggagtatgacgaataca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgctaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcaccggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccatcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtattaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaacgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactgtcccctgacattatacaagcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtggctcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +cagaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgagctcaaagagggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagtccttcttgatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctggctggaaacgcgtttacagc---aggaaagataat +ctttgcagctatcccccccaattttccaattgacaatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaaccttccgatgcctgatgttcgcaataacttctttcatta +taaccaagggtctgat---tcgaggttacgcctaattgcaatgttatatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtgctgatttctcattcaatttcct +tgtaccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcctactgaaaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggtaccacccaactcttgcctagccaaatttgtgcttt +caggggcgtcctcaccagatcaacaagcagggccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggtcgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccgtgaggcagac---------tttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcatatttacca------tcttctggtgggcg------atcca--------- +--acgggactctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagttacacaa +attaggtttcatgactatagccaagaatggtgattctccaataattgtccccccaaatggatactttaggtt +tgaatcctgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +aattc---------aataa----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762558.1/1-7509 |Norovirus GII isolate Hu/US/2014/GII.Pe-GII.4 Sydney/CS0031 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacagcc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgactatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcgacctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagcccttaccactttcaactttgaccgaaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagtgggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagaggacctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagactttaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagaactcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaaactcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggagagtccttcacaggaaaactggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagaccttctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacgacaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagaatttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcaccagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcacttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +tcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762559.1/1-7390 |Norovirus GII isolate Hu/PR/2014/GII.P16-GII.13/Bayamon0177 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------gacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggtagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttgggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatacgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaaaatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtgcagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgactcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----cagaggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacgcctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762560.1/1-7450 |Norovirus GII isolate Hu/PR/2014/GII.P16-GII.13/Bayamon0178 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggtagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttgggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatacgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgatcagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtgcagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctcgta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgttgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccaaatggtcatttcaggtt +tgactcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttctgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------tg +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----cagaggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacgcctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762561.1/1-7333 |Norovirus GII isolate Hu/US/2018/GII.P4 New Orleans-GII.4 Sydney/CS0014 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------cccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcagacagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtacacaaaccgccagctgccatcagcctcgctaaggttgagttggcaccactctccttatactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggggaaacgtt +cccctacacagcatttgacaacaactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaatatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaaaataaggcctcttaacatcctcaacatcttggcctcatgtgactg +gacctttgcgggcatagtagagtccttgatactcttagcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggacctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacactcgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +gggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagccccactagactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttccgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggactgatggacacaatgagggttgggaaacagctcaaggttgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtataatggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaggatctatggt +ccaagccacaagtggaaaacacagagga--------aactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtacctccaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacgggttctgaaa +ttaggaagagaaacccagatgatttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacagggtccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgcgccacccaggggagtgagggagaggctacacttgagggtggtgac +aacaaggggacttactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctacgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccagaggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctgagagatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgctcaaggacgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggaagaactcaaagcacactgtgtcacacttcccgttagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-tgaagttctccc +cagaaccacattt-ggcccaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttt +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaaactc +aaagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaagatt +agcaaattggtcattgcagagctaaaagaaggcggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccacctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaaccaaaccattttctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggtgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgacttcgctccaaaactgggcagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aacact------cataatgttcatctggcccccgctgtggcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------ggtgtagcgggta------tccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaaacttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctgggttagcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgcttcaa +gcacaagttgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacttataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------a +ccaggaa----------------gaactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctc--------------------- +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtat-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc----------t-tt----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762562.1/1-7363 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0193 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------ccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggactcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccttgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ccaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgac-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762563.1/1-7485 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0194 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------accgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcacctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaatagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ccaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgagg-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762564.1/1-7529 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0195 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaagcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattttctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ccaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgac--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762565.1/1-7420 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.13/CS0004 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------accgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccgccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccaccaaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcttttgacaacaactgctatgccttttgctgttgggtattagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaatagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtcctcgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgcgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaaggaccagaagaccttgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaagatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttagccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +taactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccggatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaaaaacacctctgtacagaccaacaacgagttggccggggccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaagacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaagagtacgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggctcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgacctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaagaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaag +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccggaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttatccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcgcactgcataacactcccagtccgagtaggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgaccatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccgaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagtaaaatt +agtaagttggttataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtgtcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatctggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaatgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgaccaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaattaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagttgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggattttagtgggttgttgtatggggtgttaacccaag---acaatgtaagtgaggg +tgca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacacccg- +--------ttggagttgctc---aaaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcag------gggcag-------- +-gatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggcacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgctatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgccccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----cagggggatcttctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggcccttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762566.1/1-7551 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0275 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacgtgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtata +agaggataagagaggagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaattgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcactgtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762567.1/1-7501 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0276 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaagaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacactccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaggaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcactgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatgct------cacaatgtacatctggcccctgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762568.1/1-7542 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/CS0651 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaaggccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcactagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaaaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +gggctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcctttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccgg- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacttttccgggtg +agcagctcctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgctagcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------tt---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762569.1/1-7497 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/CS1009 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgctcgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccagacccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---cagaaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgctaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaagaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagaaagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctattcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacagtgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------taacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaagaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaagctttggactggaacgga +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccttgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggag---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762570.1/1-7552 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/CS1010 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgctcgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccagacccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---cagaaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgctaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgataagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaagaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagaaagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctattcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacagtgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcctttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------taacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaagaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaagctttggactggaacgga +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccttgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttcttt +t---------ctttagt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762621.1/1-7565 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Jackson1608, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagctagtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggactgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactagacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccggtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggttgcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggtatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgatagcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---aggtcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gac-------gaag---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatcttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggtcggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcataggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagaggctgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagattac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaagttggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggcggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacccgtgctgattcccttacccgatgttaggaataatttctatcacta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccca--------- +ca---------------------accatcgagggtact---------------------------------g +ccaggaa----------------gagctaatctcaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttctttttc-----t-tt-------------ttcttt +t---------ctttagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762622.1/1-7547 |Norovirus GII isolate Hu/US/2017/GII.P4 NO-GII.4 Sydney/Jackson0849 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctagc-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccgcgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactgggacaatcctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctatacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagacataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gaccttcgcgggtatagtggagtctctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactctgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccattgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgaggacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaacgccctcctagcgagaattgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggaccagcgtgtgggcctcattccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggcttcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacaaggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggtc +cggctcttaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaagt +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagaatacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccgttcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactacgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatctactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggattgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggccaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgagggctgatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaaattctcttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaatta +caacaggcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcattgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatccc-----------ctaac------------ccttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctctctttt--t-ct----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762623.1/1-7560 |Norovirus GII isolate Hu/US/2017/GII.P4 NO-GII.4 Sydney/Jackson0853 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------gtctagc-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccgcgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactgggacaatcctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacagaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctatacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagacataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gaccttcgcgggtatagtggagtctctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactctgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccattgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgaggacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaacgccctcctagcgagaattgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggaccagcgtgtgggcctcattccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggcttcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacaaggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggtt +cggctcttaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaagt +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagaatacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccgttcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactacgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatctactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggattgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggccaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgagggctgatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaaattctcttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaatta +caacaggcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcattgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatccc-----------ctaac------------ccttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctctctttt--t-ct----t--------tcttt- +-------a-------gt---gtcttctaaaacaa-------------------------------------- +------------------------------------------------------------------------ +- +>MK762624.1/1-7558 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Jackson4273, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaaggccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttggagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagctaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatccggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggccgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaggtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatcttaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agaacaaaatgt--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaagaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggttcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggaaat +gacaaaggaacgtactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagatcagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatccccat +cacgcccgaaagaacgaattctggaatggtgaggccttcactggtaaattggcagaccaagcatcaaaagcg +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggcgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaagttggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggcgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcagctcctctttttcagatccaccataccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacctct--------- +ca---------------------accatcgggagcact---------------------------------g +ctaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaacctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaacca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctgggaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccataacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga--t-----------gtgaaaagacaa------ +--aa-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762625.1/1-7491 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Jackson6754 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccctc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagagcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacaacttagcgacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcgagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagtaaccccattca +tgatgctcttcgcttacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagcaggacttctcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagtattggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaagaagagagggccacattagggctagtaacaggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgaactttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataagaggggcaatgactatattgtcattggggtgcacactgcagca +gcccgaggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgagcccagaggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaagcgtgtgcctcacttgacaaaaccacctccagcgggaatccccat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgctgggattcaacgcaacagagggcagtactagcaacagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaaggactcccttctggtgtgccatgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaggtcaccaaactgtcccctgacatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagcgaagatctgaac +ggtctcactttcctccgaaggacggtggctcgtgatccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcacgt +gattatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgattttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgacccctccgaggatgtccccgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaatag +tcct--------gggcttaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacat---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggttgtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggccataaaacaaggggtcttgaccgctggc +ggcttctcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttctagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------atgcgc--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762626.1/1-7499 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.2/KenaiPeninsula0430 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggggagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +tccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagatctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaaaaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtaagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccccgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactcttacaggggatcaaagagtcggacttataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcgcggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcagttaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacacagcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagttacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaaaagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattataataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggagccaccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgtcaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcccgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatataaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaatccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagatccaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762627.1/1-7504 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.12/Douglas0168 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccactaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagggaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggtttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatagatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatccttgcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agctcgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcatttagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggatccacatatgatcttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggccctcaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaagttggaccccgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcctgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttcccccccattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgacccaacagaggatgttccagc +ccctctgggcacgccagatttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacctttatcaggagtcagccccctcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catcttttaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggccccaggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattacttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacctacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgcacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcat------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aa---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762628.1/1-7482 |Norovirus GII isolate Hu/US/2018/GII.P2-GII.2/Ada0178 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +----------gaagat---ggcgtctaac-gacgcttctgctgccgctgctgtc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttgtt +tccctatacagcctttgaaaacaactgttatgccttctgttgttgggttttggacctcaacgattcatggct +aag---caggaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaaccctgagggcgtgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgccctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgcccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtttcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaggaaacacacggcattctcaagcaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactcttgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaattgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtacttgaagctgccaaaaagacgattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacatacgcgcaagcgtgcgcgtctcttgacaaaaccacatccagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaggaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggttaaa +actgagaaagtgtatgggaagataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatgggccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggctatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgctgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcacttttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttaaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +tagtcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggatggggagctccaagggtcaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtaaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaacttgaatgggtccccttttgatccctccgaggatattcccgc +ccctctgggtgtacctgatttccagggaagggtctttggtatcatctcccaaa---gggacaa--------- +-----ac-----ataatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--gcccagccattgactgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcaatgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaacgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----tctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaataggaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcat +acctccgtaagaggggggagtcaca--------agc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762629.1/1-7535 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Lee0113 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctaataccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgcgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggaaaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggatgagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcga +aacgagacttccctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaatagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggataccatgaaggttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tacaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaagcaaaggaaggaagagagggtcacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgcccctccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaatatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctatcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgctgattttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctacgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacggatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgcctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762630.1/1-7507 |Norovirus GII isolate Hu/US/2015/GII.Pe-GII.4 Sydney/Broward1056 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggttgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacacccttaggagattacatggagagtcctt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggactggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +gctggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +attagacctcgaggcaattgaaaataaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactttcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcatcttgccag +ggagctggccaagaagatcgcgacctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagcgatgccataatcattaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactga +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagcccttaccactttcaactttgaccgaaacaagatacttgcttttagacagcttgctgccgaaaacaagt +atgggctgatggacacaatgagagtgggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cgctcaagaacatcgcgatcaagaagtgtcagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagaggacctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagtatttggtcgcggatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtagccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatactgccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcctgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccacttccacctggcacctacgaaccagcctatctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtacttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagagatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggttgttgcggaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccctgtacctcccaatggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagttacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacgacaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaaaacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaacgtaattga +cccctggattaggaacaattttgtacaagcccctggtggagaatttacagtgtcccctagaaatgctccagg +tgaaatactatggagcgcgcccttgggccccgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcaccagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaga------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccagaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +tcacaaattgagaccaccaaaaagttacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctcagaggcggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttac----------c-tt----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MK762631.1/1-7490 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Pinellas0160 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcctccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctttggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacagagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccagacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagacgagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattggggctagtaacaggttcagaaa +tccgaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttctctggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatataaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaagttccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtccaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccattgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctcttggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaacag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------cgtggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaattcaataaatcaaagggcagaatttgattttaaccagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762632.1/1-7547 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Natrona0468 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacggaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcga---agaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaatacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgatgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattatccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcgtcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactcttacaggggatcaaagagtcggactcgtaccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcttttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +acgaggagcttgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtaagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccggttcagattcccaaagccgatt +agaccagatgtgacaggaatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaaaggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaagaaaagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacctctaatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtaactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacgatgataccccactct +caaagacccatacagctcatggcattacttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacggtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcttaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaaccccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaacctcaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcaggtccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgcaggattggcatctgacgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccactttaccacccct--------- +ca---------------------accatcgagggcacc---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtcccagctcggggacccccc------------------aa +ccaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgc-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctgggaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttcttt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762633.1/1-7519 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/NewYork0199 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagatctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggatgaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agtttatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaggcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcccgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaggccattcactgaacccagggga +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggagagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaagtc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaatcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcgtgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcaggttcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggactggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------atggtt-----tctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatg------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762634.1/1-7419 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Chittenden0425 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgttgagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaatcaagaaggtagcaaatattttcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggatttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgtcccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaagcaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccagattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccgtgcagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccagggaacaacacaactccaagccagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtctccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgctccttctgttgctccagtatttccaggag +agcgcctgttattcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacgtcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acgaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagta----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaaccctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctc------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762635.1/1-7568 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/LosAngeles0190, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggattatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcacgaatcaggtactatgtaaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccgcaatt---agatcaaaatga--------atcagagactaaggaagagacccctaagtcagag-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgaataca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcaggaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacagaagtgttgatt +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +ggcaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacagaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgataaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +actaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctc-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttctt----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MK762636.1/1-7532 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/LosAngeles0196 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaagtaaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgctaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacattaagttgc +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaacttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcagagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccacatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgacgcagactac +t-ctcgttgggattcgacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacagtt-ggcacaaatagtcgctgaggatctactggcccctagtgtggtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgcgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagttctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagttccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacggtttcgtgccgagtcctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggtgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacaccgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagccaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaaattctctttttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttttaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttcttcgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcttagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatataatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggacccccc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---t-a-aac-tga---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762637.1/1-7557 |Norovirus GII isolate Hu/US/2015/GII.P16-GII.4 Sydney/LaPorte0381 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccattgagcctgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaattgctatgctttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatgtcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaagagct +atctagcaggataagaccagtagtcgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcattacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacatgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccctatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------tttttt +----------ctgtagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK762638.1/1-7563 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Miami0181, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaggggatacc +ccc-----------------------------tcctccacctaatggtgaaggagaaggagaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccagcacagcattcagtgttccaccactgagcttaagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggggagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaagttaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcttcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaagggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggatactatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaagtcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaagaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgtatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccacgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagtaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgcttctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttatcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttcttt-------cttt-------------ttctt- +-------------tagt---gtcttc---------------------------------------------- +------------------------------------------------------------------------ +- +>MK762639.1/1-7505 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Porter0184 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagagggtacc +ccc-----------------------------tcctccacctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtgccaccactgagcttgagagaaaatagggaggccagggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaacgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaggacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaactaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccagaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgactttaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccctatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggcgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaggatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaaatcacgataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagataagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttaaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaactttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgagtttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----tc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccaactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggt------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762640.1/1-7462 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.3/Sumner0467 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctcggcctaaacagccc-gccccgagggacaacccacaa +aag---------------------cctccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagaaatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgcgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaatggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccctaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatatttctgtgttcattgtccacgctgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaatatcctgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcgatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcttcccctgacatagt +tgggacgatcaatgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggatgagaccagtggttgttatgatatctggcaagccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgactttctggtgtacgccgaggcaccagatgtagaaaaggcaa +agcgagactttcctggccaaccagatatgtggaaggacgccttcaagccggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagactctca +ccaccggttcccttattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttagtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaacttaaacaag +caatcaaaaatgtgatcatcaagaggtgccgaatcatctacggtggctcaacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtaaagaatacctctgtacagaccaacaacgagttggctggagccc +tgcaccacctcaaacatgcccgaatcagatactatgtcagatgtgtgcaagaagcagtctactctatcatgc +aaattgctggcgctgcttttgtcaccacacgcattgcgcgccgcatga------acatacaagaactttggt +cgaagccaccatt---agaccaaaatga--------gtcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagtaagggtctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagatttctgtgaggaggaggagatcaagatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaagaagagagggccacactagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttttgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaagcaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgagggcactgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaatacaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttggggacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcatacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gataaaggaacatattgtggggcacccatcctaggccctggaggggcaccaaaattgagcactaaaaccaaa +ttttggaggtcatcaaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtatcaagggtgggccctccttgcagcaggtaatgagagatcagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaagtggacttacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgtccggaagaatgaatactggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaaaaagagactgctctggggctctgacttgtccaccatggtccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtaggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-cccgctgggattcaacacagcagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaact-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaagagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaaccatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcattacttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattagtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacatgataga +tccctggattatgaataattttgtacaagcacctggtggtgagtttacagtttcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaacgcgtttacagc---agggaaagtgat +ctttgcagccataccccccaattttccaactgataatttgagtgcagcgcagatcacgatgtgtcctcatgt +aattgtggacgtcagacagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtgttgactaggcccagtcctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttttccctccctattttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccactcaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccaggtcaacaagcagggccagtgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacaactagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +ccctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaacg--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaagttgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------ttccaacaatggaccttacctga +ctattctggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctccaaattttcccggtg +aacagcttcttttctttcgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcttggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacattagcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatattta +caaaatg---------------------------------catcttttaatcatgataaggagatgttaaat +gcacaaattgaagcaacaaagaggctgcaggctgacatgattgccatcaaacaaggggttttgaccgctggc +ggtttttcccccactgatgcagcccgtggggccattaatgcccccatgacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcagtgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttacaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaaactca------------------ac +ccaactta-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------tagaactagagactgggtcaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcccac +acc--------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762641.1/1-7380 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Davidson0488 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------ccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgtcttttgctgctgggtgttagaccttaatgattcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaaggaccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgaacgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaag +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcatcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacagatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacagacaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctctcaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtggctgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcggg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtccc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------ag------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762745.1/1-7453 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.13/Texas0842 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgacgat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccaccaaacgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtagtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcagctaggtcactagtccacagggccaaggaggagtt +gtctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccattatac +aaattgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaagaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaactgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtattaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcaccgagcccagaggt +aaacttccaagaccaagtgtgttggaagcagccaaacagaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccggaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgataaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcgtaacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaaggcctatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtggaatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatctggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgctccctcattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtcttcactgtgtcttgtagagtgttgaccaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaattaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagttgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggattttagtgggttgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacacccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggcacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agtcc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgccacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tggttc---------------------------------------gaggacagcaaactgggtgcaacagca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +agcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK762746.1/1-7562 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Hardin1028 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaaa +a------ac----aacgacaaggaaaagtcttcaggtgaag---------------gcttattcacgaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------ccctcaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------ccctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---agtacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatccgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctttgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagaccaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttaagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacactagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggtatg +aatatgaacgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgttggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +cagcaagcatcctttcaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacaca---------------------------------a +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagaca------- +---a-a-aac-tgat-----ta-----c------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaa------------------------------------------- +------------------------------------------------------------------------ +- +>MK764013.1/1-7556 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Wayne0078 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaactacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgctttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +gatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ttttc-------------t-------------ttctt- +-------------tagt---gtctag---------------------------------------------- +------------------------------------------------------------------------ +- +>MK764014.1/1-7446 |Norovirus GII isolate Hu/US/2015/GII.P16-GII.13/Allegan0877 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaagggcgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaagggcatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggtaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacatcgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgtcccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggctaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764015.1/1-7523 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Ingham0228 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagaa---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaagttggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcctagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggacgaatttgaactccaaggtc +ccacaatcaccactttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggatactatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgtcggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagtgg--------atcagagactaaggaggaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtggatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttaaccgctaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +gggctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcagccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgagaataatagaaaattg +caacaaacatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764016.1/1-7555 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.4 Sydney/Bay0244, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgtcgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtagtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattgcttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcactagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgcgcatcaggcctactgcacgagaggatggatgaatttgagctccaaggtc +ccacaatcaccaccttcaacttcgaccggaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaacgaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggggttcccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattagaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaacgaattctggaatggtgagaccttcactagtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccgatgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggtccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccccagtgtagtagatgtgggagacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgtacttctcaatggaactccatcgcacattgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagctaaccgctaaatta +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatt +agcaaattggtcatagctgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgagaccatcccccgactttgatttcatattctt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttgaccgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacacaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacacg----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agcact------cacaatgtacatctggcccccgctgtagctcccacctttccgggtg +aacaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcgtctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagttcgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttaggg--------------acgc---------------- +------------------------------tgttcctgctcggggacccccc------------------ag +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcgtga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-tt-------------ttctt- +-------------ttgt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK764017.1/1-7482 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Osceola0226 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +-----tgaatgcagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacaaggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagagccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccagacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacacctttgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tccgaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaataggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtagtccctgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagatttccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgagttctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaggca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatagcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagacaaacacaacag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------cgtggcaaac +tgacgacct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gat---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtca------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764018.1/1-7413 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Stafford0184 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------ccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcggaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctttacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccctacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacgctggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacagttggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacatctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgcggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggggacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcacattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctaatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttttatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaaccccagc +ccctctaggagccccagattttgtggggaagattcaaggcatgctcacccaga------------------- +-----cc-----acaagaacagatggttcaaca--------cgc-----------ggtcacaaagctacggt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaactgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctct------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaa------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764019.1/1-7511 |Norovirus GII isolate Hu/US/2015/GII.Pe-GII.4 Sydney/Arlington0551 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------------------------------------------------------------agc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagctattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttgcatggagagtcatt +cccctacactgcatttgacaacaactgctatgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacgtgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtaga +actggtccctatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctaacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcatg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaacgaactagccggcgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaaacgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgatcaacaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaattttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaaatcaggtgaattctgccggttgaggttccctaagtcaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccagaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggttaag +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgacgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctaacatttctccggagaactgtgacccgtgacccagctggttggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccgcactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggtattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtactgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcactggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gctgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctagaactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tatccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgtagctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK764020.1/1-7478 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.3/Pittsylvania0388 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +a------ac----aacgacaaggaaaagtcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctcggcctaaacagccc-gccccgagggacaacccacaa +aag---------------------cctccaagatcaccaactcccgagttggtc-------aaggggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagaaatataccactatggcttgtacgtggaaaaaggcttagt +gctgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtttacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaaggacaacaggcttctttagaccttaccaagagtggaatagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaatatatttctgtgttcattgtccacgctgttcac +cagacctataaaagatctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacgttcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggaggggttggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcgatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacgaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggatgagaccagtggttgttatgatatctggcaagccagggataggcaagactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +agatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +agcgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcccttattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccactttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaataagt +atgggttagtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgccgaatcatctacggtggctcaacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtaaagaatacctctgtacagaccaacaacgagttggccggagccc +tgcaccacctcaaacatgcccgaatcaggtactatgtcagatgtgtgcaagaagcagtctactctatcatac +aaattgctggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactttggt +cgaagccaccatt---agaccaaaatga--------gttagaggctaaggaagaggcccccaagtcagaa-- +-gat-------ggcg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacacagcattctctagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtaccttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagatttctgtgaggaggaggagatcaagatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgataacagaagtgttgact +acaatgagaaattggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttttgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaagcaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcacctgagggcactgtggcaaccgtgctcatcaag +cgccctaccggagaactcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaagggatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaagaggggcaatgactatatagtcattggggtgcatacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatattgtggggcacccattctaggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgtcaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +ccctcacaaaaatggacttacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgtccggaagaatgaatgctggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtttacacggcagccctcaaggacgagttggtcaag +actgacaaagtctatggaaagatcaaaaagagactgctctggggctctgacttatccaccatgatccggtgt +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtaggtatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccattatgatgcagattac +t-cccgctgggattcaacacaacagagggcggtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccgccaaattg +aaagagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttccttcgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaaccatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcattgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaacgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaattttccaactgacaatttgagtgcagcgcagatcacaatgtgtcctcatgt +aattgtggacgtcagacagttggaaccaatcaacctcccgatgcctgatgtccgcaacaacttctttcatta +caatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagtcctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttttccctccctattttgactatctctgagatgtctaa +ctctagg---tttccagtgccaattgattctttgcacaccagtccaactgataacattgttgttcagtgcca +aaatgggcgcgtcacccttgacggtgagctaatgggcaccactcaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgaccaagctgacacggcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacaactagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaacg--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tgatgactt---tgcccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcggacg------gtcca--------- +--atggcattctagactgcttggtcccccaggaatgggtccaacatttctaccaggagtccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacattagcccccatgggaactgggaatgggcgcaga---------ag +gatcc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaggttgattttgaaaataacaaatattta +caaaatg---------------------------------catctttcaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggttgcaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttttcccccactgatgcagcccgtggggctattaatgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagtt---------acaccaaattttacaaccaatcaa--- +gccccaa----------------aacccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaaactca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------tagaactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-att-ttta-----aa------------tttggtt----------tg-------------taatcg +g-att------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK764021.1/1-7536 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Loudoun0411 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagctggtc-------aagagaatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +tccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaagataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +tatgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggttgcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaggtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggatttccctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaacaccacctttaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgagaccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaaaacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtggaccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaaaaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtgcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaagcactccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacctgatgttaggaataatttttatcatta +taatcagtcaaatgac---tctactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcatgctcacccaaa------------------- +-----cc-----acaagggcagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagtgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgcttcaa +tcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaaactttggattggagcggg +acaaggtactgggccccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aaccgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcggggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764022.1/1-7533 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.2/Hanover0423 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacaaggaggccaaggagccact +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggagtagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttattatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +ggggaaagttttcgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattacgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaatttcgaccgaaacaaaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaataggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcggcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagggtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaactcaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggctccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------tagaactggtgagtgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggaa---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK764039.1/1-7512 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Cambria0298 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggcgtgtctggtctacctgagctcacaacagttggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatatctcccgactccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgctttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcactgttcac +tagacccattaaggacataattggcaaactcaaacccctcaacatcctaaatatcctggcctcatgtgactg +gacctttgctggcatagtggagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacgggttggagatcctaaaactagt +catgaaatggtttttcccaaagaaagatgaggccaacgaactgtctatggttagagccattgaagacgctgt +actagacctggaggcaattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagccaggaaactatccaccaagtcagcctcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagtagaccaagaccagtcgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaattgcatcaacactcacaggagaccaaagggtgggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacggtatgagcaatcccatcca +cgatgcactgaggttgcaggaactggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcactaccaatttggtcaatcccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagactttcttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcactctgatttctcacatattaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactgattgcgcgtgcctctggtctcttgcacgagagattagatgagtacgagttacagggtc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaataagt +atggtttggtggacacgatgagggtgggcaaccagcttaggaatgtcacgaccatggatgaactcaagaagg +ctatcaaaaacattataatcgggaagtgccagatagtctatggcggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgttgttgagagggtgcagagcaccagcgtgcaaattaacaatgagatcgctggtgcag +tgcatcaccttagatgtgccaggataaggtactatgtcaaatgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacctcacgcatcgtaagccgcatga------acattcaaaatttatggt +ccagaccattaactgaagaagcagatga--------ggcaaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttgtcgtctcttcggatgacatcaagccagagggcaagaaaggtaagaaca +agagtggccggggcaagaaacacacggcattttcaagtaaaggtctcagtgatgaggagtatgaagagtaca +aaaggatcagagaggagagaaacggcaaatactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgccaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaatccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaacgaaagaatcagctttgaggccccaccgagcatttggtctagaattgttaactttggttctggatggg +ggttttgggtgtcac-ccagcctcttcataacatcaacacatgtcatacctcaaggtataactgaggccttt +ggtgtacccataaggcaggttcaaatacacaaatcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacggatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgaaggtgaggcaacactcgagggtggtgat +aataaaggaacatactgtggggcaccaatcctaggccccgggaacgccccaaaactgagcaccaaaactaag +ttctggaggtcctcaactacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagac +cccccacaaaaatggacgtacgcgcaagcgtgcgcgtcccttgacaaaaccacatctagtgggttcccccac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgactccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaggtgtatggaaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggcggtctgatggacgaactcaaagcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatataggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccttgcacctctcagtggaattccatcgcacattgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattggacccagaaaaactgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgattatcagtgaggatctgaat +ggcctgactttcctgagaagaaccgtcacccgtgaccctgcagggtggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccgtcattttacagcaagatc +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccagtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgtaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacaacaaattaccatgttccctcatgt +gattatagatgtgaggactttggaacctgtcttattaccactccctgatgttagaaataatttctttcatta +caatcagaaggatgat---cccaagatgagaattgtggctatgctttataccccccttagatcaaatggctc +aggtgatgatgtgttcacagtctcctgtagggtgttaactaggccctcccctgactttgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtaaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaacttgaatggatccccttttgacccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtattatctcccaaa---gggacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttctat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtacctgtcaatggatactttaggtt +tgactcttgggtgaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtggctggtcttgcaggggacgtgctcagtaatgggctc +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgacaaggaaatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccccgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggccc---------------acgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaagaccaactttg +accacaaccactgggt-----cctcacttgg------tacagcttcatc----------aaattcg------ +-------------------------------actcgcagtacaaacctctcccaatcaacagtttccagagc +tgcatc---------------------------------------taggactggtgagtgggttagagacca +aaacagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------t-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764040.1/1-7529 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Cambria0299, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggcgtgtctggtctacctgagctcacaacagttggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatatctcccgactccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgctttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcactgttcac +tagacccattaaggacataattggcaaactcaaacccctcaacatcctaaatatcctggcctcatgtgactg +gacctttgctggcatagtggagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacgggttggagatcctaaaactagt +catgaaatggtttttcccaaagaaagatgaggccaacgaactgtctatggttagagccattgaagacgctgt +actagacctggaggcaattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagccaggaaactatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagtagaccaagaccagtcgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaattgcatcaacactcacaggagaccaaagggtgggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacggtatgagcaatcccatcca +cgatgcactgaggttgcaggaactggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcactaccaatttggtcaatcccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagactttcttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcactctgatttctcacatattaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactgattgcgcgtgcctctggtctcttgcacgagagattagatgagtacgagttacagggtc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaataagt +atggtttggtggacacgatgagggtgggcaaccagcttaggaatgtcacgaccatggatgaactcaagaagg +ctatcaaaaacattataatcgggaagtgccagatagtctatggcggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgttgttgagagggtgcagagcaccagcgtgcaaattaacaatgagatcgctggtgcag +tgcatcaccttagatgtgccaggataaggtactatgtcaaatgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacctcacgcatcgtaagccgcatga------acattcaaaatttatggt +ccagaccattaactgaagaagcagatga--------ggcaaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttgtcgtctcttcggatgacatcaagccagagggcaagaaaggtaagaaca +agagtggccggggcaagaaacacacggcattttcaagtaaaggtctcagtgatgaggagtatgaagagtaca +aaaggatcagagaggagagaaacggcaaatactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgccaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaatccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaacgaaagaatcagctttgaggccccaccgagcatttggtctagaattgttaactttggttctggatggg +ggttttgggtgtcac-ccagcctcttcataacatcaacacatgtcatacctcaaggtataactgaggccttt +ggtgtacccataaggcaggttcaaatacacaaatcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacggatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgaaggtgaggcaacactcgagggtggtg-- +-ataaaggaacatactgtggggcaccaatcctaggccccgggaacgccccaaaactgagcaccaaaactaag +ttctggaggtcctcaactacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagac +cccccacaaaaatggacgtacgcgcaagcgtgcgcgtcccttgacaaaaccacatctagtgggttcccccac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgactccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaggtgtatggaaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggcggtctgatggacgaactcaaagcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatataggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccttgcacctctcagtggaattccatcgcacattgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattggacccagaaaaactgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgattatcagtgaggatctgaat +ggcctgactttcctgagaagaaccgtcacccgtgaccctgcagggtggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccgtcattttacagcaagatc +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccagtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgtaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacaacaaattaccatgttccctcatgt +gattatagatgtgaggactttggaacctgtcttattaccactccctgatgttagaaataatttctttcatta +caatcagaaggatgat---cccaagatgagaattgtggctatgctttataccccccttagatcaaatggctc +aggtgatgatgtgttcacagtctcctgtagggtgttaactaggccctcccctgactttgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtaaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaacttgaatggatccccttttgacccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtattatctcccaaa---gggacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttctat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtacctgtcaatggatactttaggtt +tgactcttgggtgaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtggctggtcttgcaggggacgtgctcagtaatgggctc +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgacaaggaaatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccccgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggccc---------------acgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaagaccaactttg +accacaaccactgggt-----cctcacttgg------tacagcttcatc----------aaattcg------ +-------------------------------actcgcagtacaaacctctcccaatcaacagtttccagagc +tgcatc---------------------------------------taggactggtgagtgggttagagacca +aaacagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------t-ttagaat--------taattg +-------a-----tctt---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK764041.1/1-7480 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.12/Cambria0311 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttctaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactccagagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaatgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtccttgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaagtgcaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcaacaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattatct +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactcattccaccaagtttaccccaaaattgggtgctgtacaaattggca---------cgtgggaaca +agatgatgt---acacatcaatcaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacatttcctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacttgtatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaaaacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctaatgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----ctgcttcagc------taggagctcttc-----------ta--------gc +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK764042.1/1-7529 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Nassau0300 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------tggtt---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagggtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaaatactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccattct +caaagacccgtacagctcatggcactgcttggtgaatcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagccagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccaaggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgctccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaaacagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagta----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaaccctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttct--------------------------------------------- +------------------------------------------------------------------------ +- +>MK764043.1/1-7409 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Nassau0301 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +----------------------------------ggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgtcatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagggtcgtgctgtgggacgactatggcatgagtaaccccataca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacagg +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaaatactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccattct +caaagacccgtacagctcatggcactgcttggtgaatcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagccagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccaaggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgctccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaaacagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagta----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaaccctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH041321.1/1-7532 |Norovirus GII isolate M1708Y217, partial genome +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcctgagttggtc-------aagaggatacc +cct-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaatggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatgtcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaggaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataataacaacaaaccttgccaacccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaattacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagagatgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aagctggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaag +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaatca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcactgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaagatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaacag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccagcggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcacccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---aac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH041322.1/1-7532 |Norovirus GII isolate M1714Y100, partial genome +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatc +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctatacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaagactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaggttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaagcatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggacttcgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggcgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagaactcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttggggacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacaccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgtcaagagtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgataaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccgatgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacagatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +cagag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK752933.1/1-7414 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.4 Sydney/Grant0016 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------------------------------------------------------------------aatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---taggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccccgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggtgatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgacgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctgc +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaggttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttgactggggccc +tgcaccatctcaaacacgcacgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaacga--------atcagagactaaggaagagacccctaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcatactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaattcccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaagggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaatcctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctggtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccctggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactctatcgcacactgg +ctgctaactctctgtgccttatctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaactcgcccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggtcaacaaaatgtaattga +cccctggatcagaaataattttgtacaagcccctggtggggaatttacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgattgcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccctgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagtgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccactatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtttctcgaacctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcctaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752934.1/1-7511 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.4 Sydney/Grant0015 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---taggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggctaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccccgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggtgatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgacgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctgc +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaggttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttgactggggccc +tgcaccatctcaaacacgcacgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaacga--------atcagagactaaggaagagacccctaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaagcatactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaattcccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaagggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaatcctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctggtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccctggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactctatcgcacactgg +ctgctaactctctgtgccttatctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaactcgcccagacaagactgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggtcaacaaaatgtaattga +cccctggatcagaaataattttgtacaagcccctggtggggaatttacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgattgcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccctgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagtgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccactatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtttctcgaacctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcctaagcgaggggagtcacg--------ggtgtaa--t-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752935.1/1-7536 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.2/Polk0461, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaagccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccattatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctacgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatacgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacaaaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtatgcaagaagcaatctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaaaacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaga +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacgtctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggcgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +ccttcacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagcg +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtactgacataaaattggaccctgaacagttaaccgccaaactg +aaggagtatggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccgattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgagcccgtggttggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---tggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaatcatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctttgggtgtgcctgacttccagggaagggttttcggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcacaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttgggctc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagaatgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaacaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgacgcagccaggggtgctgtaaacgcgcccatgacacaggcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +ccagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gattaattga-cttt---accgtgg--------------------------------------------- +------------------------------------------------------------------------ +- +>MK752936.1/1-7556 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/St.Croix0439, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacggccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgaaagaatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcagtcaactaaagggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgactcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcgctcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccctaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggaggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgagggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccactcaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgttacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK752937.1/1-7525 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/CerroGordo0434 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gattattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgaactcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttataccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccttgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgagtttgaactccaaggtc +ccacaatcaccaccttcaatttcgatcggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggctcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctcctagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccggtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagactctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccggctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcttttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacttttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccatttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752938.1/1-7573 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Brown0441, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgagg---------------gattattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccgcaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgaactcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagaaatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcactgtactg +gcgtgtggtgtacactcccc---aatacctaatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatggtgcaaagaacaacgggtttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtggcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgattg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagagctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +tatgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccttgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgagtttgaactccaaggtc +ccacaatcaccaccttcaatttcgatcggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaagaagagagggctacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtggcaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatacgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaaaccattcactgaacccaggggc +aaacctcctagaccaagtgtattggaagcagccaagcaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcttcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccggtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacactccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagataagaccgagggacccctgatcaccagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaacaatttttatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcttttgttgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacttttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttagatt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaagca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-tac-tgat-----ta-----t------ttttcttttc-----cttt-------------ttctt- +-------------tagt---gtctattaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MK752939.1/1-7498 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Pierce0448 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagagccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagatctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtaatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcgcggcattcagacaattagctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcagttaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaagtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctatgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcgggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggccatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcttactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaaccaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752940.1/1-7479 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/LaCrosse0445 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------tggagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaaggaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggagcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtatacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgattcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaaggaccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacgaccctgttgaaagacaaagatagcttagcaacata +tatgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggtgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgcgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagttagtcaag +actgagaagatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcgcactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagatca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaaggaacaacacaactacaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctctcaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---taatgtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaattttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------ac +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---acggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcac------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752941.1/1-7509 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/BlackHawk0455 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagagaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagagaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctaacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---agtacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcgtggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaataaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaagggccagaagacctcgccgtcga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcttcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacgta +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaagcaccagacgtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccagacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggagaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcatggcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgagagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaagaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tccgaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtagtccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaatcaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggttcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaagcaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagattaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaagcattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccggacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtcttactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacaactcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccgattgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtccaatggttc +aggtgatgatgtgtttacagtttcctgtagagtgttgactagaccttcccctgactttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactagacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgctc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaacag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------cgtggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgatactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtaaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +caacaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggccataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttacc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------t +tacgtc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagcctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tatt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752942.1/1-7533 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Marathon0626 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacggcattcagtgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaattgctatgctttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacaatattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatgtcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccttgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcagggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggctacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagacttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgagaccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----t--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752943.1/1-7509 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/LaCrosse0643 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccgcctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaatcgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gtaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacgtatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcgcaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcgctcaaggacgagttggtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagttccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggccaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagtgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaacgtacatttggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--atatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagctcgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgaggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ccaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaagtca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752944.1/1-7434 |Norovirus GII isolate Hu/US/2015/GII.P2-GII.2/Ozaukee0713 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaatctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccattagcatagccaaagtggaattgacacccctctcgctgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggct +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctgtggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctactgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +cgaccattgggacgcctacaaaggtgagagagtagtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +gggaaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +aacgggactttcccggtcaaccggacatgtggaaagacgcctaccgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcgcgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcaaaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcaccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccatcgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctggcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaagtgccccaaaactaagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccgtctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgttagaacaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaagaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +agagtttccatcaatgaaggattaccatcgggtgtcccttgcacctctcagtggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacatcaaattagacccagagaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagctgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgctggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgattttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgatccctccgaggatatccccgc +ccctctgggtgtgcctgatttccagggaaaggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acatttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------ttaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggccattaaacagggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------a-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752945.1/1-7487 |Norovirus GII isolate Hu/US/2015/GII.P2-GII.2/Dane0589 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgcttctgctgccgctgctgtc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccgacaccagaactaacc-------aagagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgct +aactggggctattctggaaatgtgggacggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattgacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggtt +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcttcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagacactca +ccgccagctcactgatcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttacaaggtc +cacccctctcaaccttcaactttgaccgtaacaaaattgcagcgtttagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataattagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagaaagtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactaactgaagatgcggatga--------ggccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttatcgtctcctcagatgatatcaagccagagggtaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgcgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagagagagccaaccttggcctcgttaccgggtctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgttatacctcaaggcataactgaggccttt +ggtgtgcccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcctgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggcacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggggttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatactgtggggcaccaatcttaggccccgggaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctccacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtattagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaactggctgatcaggcatcgaaggca +aacctaatgtttgaagaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaggataaagaagaggttgctttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggactcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaacgaaggattaccatcgggcgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagtcacagatctctctcctgacattgtgcaagccaactctctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccactcgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctct +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagagacccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatagctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggaatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgacgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcctgggcacaacg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acactttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgctccttctgtcgctccagtattcccaggag +agcgcctactcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaagaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagtaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcagttctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttgcag +gctcagatccaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggt +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgagac----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ccgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----catcacacgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggcgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctgtttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752946.1/1-7457 |Norovirus GII isolate Hu/US/2015/GII.P16-GII.13/Brown0733 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggctcggcccaaacagcct-gccccgagggacaacttacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccaccaaacgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaatagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacgtattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccgggatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttggagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtctacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttagccag +ggaagtggcaagaaaggtggcatccactctcacaggagatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctatcatac +aaatcgccggagctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggatcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggcaactgtgggctgatgacgacagaagtgttgact +acaatgagaaactgaactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaacgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagcaaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcactcgacaaaaccacatccagcgggcacccccac +catgtccggaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactctagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattttattaaatttagagttaggaccagatttgaatccttatctggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcagattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgaccaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaattaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtctgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagttgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggattttagtgggttgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacacccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaacttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgctatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagcttcaatcagaaatgattgcaattaagcatggggttttgaccgtgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgaagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752947.1/1-7448 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.13/Winnebago0598 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaagg----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtatgtggagaaaggcttagt +gttgggagtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtagtctacacccccc---aatacctcatctcccctgaaactctcagaaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaagtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggatcggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggtcgttatgatatccggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtggaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ccaccggttccctgatcgcccgtgcatcaggtttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgctttcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagaattggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggtagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggtgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---aggccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcagggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctggtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacagggatgatcctggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactacatagtcattggggtgcatacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagctgccctcaaggatgagctagtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgaaatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatttttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +cagagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttttacagcaaaatt +agcaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcacccagaaattcccctgg +agagatcctattgaatttagagttaggaccagatttgaatccttacttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttttatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaactcctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggctaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +aacaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgactacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgaagctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgctgccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttactctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------cctt------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------ggg--------ct +ccacctcct----caggggggtcctctacaacctcc----------------t------------------c +tagatc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgttacaccgccgtctagtag +ggcttcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaagg----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752948.1/1-7457 |Norovirus GII isolate Hu/US/2013/GII.Pe-GII.4 Sydney/Walworth0399 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccactacggcctgtacgtggaacggggccttat +acttggcgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +tagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgttaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctcgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggatcagcgtgtgggtctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaggtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcccacataaaactgt +cattggctccacagggcggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgagatcaagaaatgccagatagtgtacaatggtaacacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcattgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggctgcctaaaacccaaa-- +-aat----gatgaag---agtttgtcgtctcttccgaagacatcagaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatacggaaaaacgagtgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccatctggggtaccttgtacctcccaatggaattccatcgctcactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacaacaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagacgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgtatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gggctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcttct------------------ag +taaatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------agc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK752949.1/1-7373 |Norovirus GII isolate Hu/US/2013/GII.P16-GII.2/Rock0558 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-------------------------------------------------------------------aatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaggacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagacttaggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcaaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcgctgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggaggattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaacggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaattaccactttcaactttgaccggaacagggtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaactggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattatgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccagtccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactacttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccacctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaacgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaaatcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggccataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcgtatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatggattagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---aat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagag----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753007.1/1-7533 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Washington0526 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-------aatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgct------------aacagc +a------ac----aacgacaatacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggcgtgtctggtctacctgagctcacaacagttgaccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatatctcccgactccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgctttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggtcgcgaacatcgttctgtgtgcattgtcatcactgttcac +tagacccattaaggacataattggcaaactcaaacccctcaacatcctaaatatcctggcctcatgcgactg +gacctttgctggcatagtggagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaagatcttggagcctacgggttggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +actagacctggaagcaatcgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggatatggaagaggaaaaagctaggaaactatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagtagaccaagaccagtcgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaattgcatcaacactcacaggagaccaaagggtgggtctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacggtatgagcaatcccatcca +cgatgcactgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaatcccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcgccctgatttctcacatattaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcgctggttgcgcgtgcctctggtctcttgcacgagagattagatgagtacgagttacagggtc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcaggaatgttacgaccatggatgaactcaagaagg +ctatcaaaaacattataatcaggaagtgccagatagtctatggcggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgttgttgagagggtgcagagcaccagcgtgcaaattaacaatgagatcgctggtgcag +tgcatcaccttaggtgtgccaggataaggtactatgtcagatgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------atattcaaaatttatggt +ccagaccattaactgaagaagcagatga--------ggcaaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcggatgacatcaagccagagggcaagaaaggtaagaaca +agagtggccggggcaagaaacacacggcattttcaagtaaaggtctcagtgatgaggagtatgaagagtaca +aaaggatcagagaggagagaaacggcaaatactccatagaggaatacctacaggacagagacaaatac---t +acgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgccaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaatccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaacgaaagaatcagctttgaggccccaccgagcatttggtctagaattgttaactttggttctggatggg +ggttttgggtgtcac-ccagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggttcaaatacacaaatcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacggatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaacgattacatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgaaggtgaggcaacactcgagggtggtgat +aataaaggaacatactgtggggcaccaatcctaggccccgggaacgccccaaaactgagcaccaaaactaag +ttctggaggtcctcaactacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagac +cccccacaaaagtggacgtacgcgcaagcgtgcgcgtcccttgacaaaaccacatctagtgggttcccccac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgactccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaagtgtatggaaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggcggtctgatggacgaactcaaagcccactgtgtgacactcccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgaaaaacattccagatataggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggacctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccttgcacctctcagtggaattccatcgcacattgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattggacccagaaaaactgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgattatcagtgaggatctgaat +ggcctgactttcctgagaagaaccgtcacccgtgaccctgcagggtggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatactga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccagtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgtaatgcccctgg +tgaagtgctactaaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacaacaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttctttcatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttagatcaaatggctc +aggtgatgatgtgttcacagtctcctgtagggtgttaactaggccctcccctgactttgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ta---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaacttgaatggatccccttttgacccctctgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtattatctcccaaa---gggacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacagggggcacgacgctgtggt +ccctacttacacagcacagtatactccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtacctgccaatggatacttcaggtt +tgactcttgggtgaaccaattttattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagtaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgacaaggaaatgttgcag +gctcaggttcaagcaactaagcagctgcaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccccgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcttactctgggagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggccc---------------acgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaagaccaactttg +accacaaccactgggt-----cctcacttgg------tacagcttcatc----------aaattcg------ +-------------------------------actcgcagtaccaacctctcccaatcaacagtttccagagc +tacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------t-ttagaat--------taattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK753008.1/1-7456 |Norovirus GII isolate Hu/US/2013/GII.P16-GII.13/Multnomah0890 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttgatt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaagggcgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacatcgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctacgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggctaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753009.1/1-7462 |Norovirus GII isolate Hu/US/2013/GII.P16-GII.13/Polk0892 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagaa---ggcgtataac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaagggcgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaagggcatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggtaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacatcgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgtcccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggctaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctctta +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753010.1/1-7457 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.13/Marion0901 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agacgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taacaatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggctaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +gacttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753011.1/1-7292 |Norovirus GII isolate Hu/US/2015/GII.P2-GII.2/Yamhill0931 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------cctagaccaccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---agatggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgttgttgggttttggacctcaacgattcatggct +aag---caggaggatgattagtaggactactggcttctttaggccctaccaagattggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacattgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaaccctgagggcttgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +agggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgatctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctatgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaacgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaggaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggttaaa +actgagaaagtgtatgggaagataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-tcaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaactgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaatcaccatgttccctcatgc +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatactttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaatttgaatgggtccccttttgatccctccgaggatatccccgc +ccccctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggct-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccagtcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---gtggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +agcc-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753012.1/1-7505 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Douglas0940 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggagaaaccccca +agg---------------------ccccctaggccaccaacaccagaattggtc-------aaaagaatccc +ccc-----------------------------cccaccgcccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggcgtgtctggcctacctgagctcacaacagttggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcgtagccaaagtggagttaacacccctctcactgtactg +gagacctgtttacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctacacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaatgattcatggtt +aag---caggaggatgattagtaggactactggctttttcaggccctaccaggagtggaacaggaagcccct +cccgactatggatgactcaaaactgaagaaggtcgcaaacattgtcctgtgtgcattgtcatcattgttcac +tagacccattaaggacataattggcaaacttaaacccctcaacatcctaaatatcctggcctcatgcgactg +gaccttcgctggcatagtggagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaactctgagggcatgtaaggatcttggagcctacggattggagatcttgaaattagt +catgaaatggtttttcccaaagaaagatgaggccaacgagctggctatggttagagccattgaagacgctgt +gttagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagtcttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaaattatctaccaaatcagcatcccctgacattgt +gggcaccataaacgccctactggctaggatcgctgccgcacgttccttagttcatagggccaaggaggagct +ctccagtagaccaaggccagttgttctgatgatctctggcaaaccagggataggaaagacccatctggccag +agaattggcaaagaaaattgcatcaacactcacgggagaccaaagggtaggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactacggtatgagcaaccccatcca +cgatgcactaaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgagaacaa +ggggaaagtcttcgacagtgacgcaatcataatcaccaccaatctggtcaatcccgcgccgctggactatgt +caactttgaggcttg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcgttctgatttctcacatatcaaattgc +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaagggagtgatgaagactctca +ctgccagttcactggttgctcgtgcttctggtctcttgcacgagagattagatgagtacgagttacagggtc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcggcgttcagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcaggaatgtcacgaccatggatgaactcaagaagg +ctatcagaaacattataatcaggaagtgccagatagtctatggcggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgttgttgagagggtgcagagcaccagcgtgcaaatcaacaatgagatcgctggtgcag +tgcatcaccttagatgtgccaggataaggtattatgtcaagtgtgtacaagaggccatatactcactcctcc +aaattgccggcacggtgtttgtcacttcacgcatcgtgagccgcatga------acattcaaaacttgtggt +ccagaccattaactgaagaagtagatga--------ggcaaccatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcagatgacatcaagccagagggtaagaaaggtaagaaca +agagtggccggggcaagaaacacacggcattctcaagtaaaggtctcagtgatgaggagtatgaggagtaca +aaagaatcagagaggagagaaacggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgccaga +gaatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcactggatctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccgagcatttggtccagaattgttaactttggttctggatggg +ggttctgggtgtcac-ccagtctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtgcccataaggcaggttcaaatacacaagtcgggcgaattctgtcgtctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctcttgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatggggatgctgcttactgggtctaacgcaaaaagcatggatcttggcaccacgccc +ggcgactgtgggtgcccctacatttacaaaaggggcaacgactatatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggcaacactcgagggtggtgat +aacaaaggaacatactgtggggcaccaatcctaggccccgggaatgccccaaaactgagcaccaaaactaag +ttctggaggtcctcaacaacaccactcccacccggcacgtacgaaccggcatacctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttactgagccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaatcatcaatgtgctagaacaaacaatagat +cccccacaaaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtggattccctcac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacttaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggacgagctggtcaaa +actgagaaagtgtatgggaaaataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggtggtttgatggacgagctcaaagcccactgtgtgacacttccaataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacactccagatataggtaccactatgatgcagactat +t-ccaggtgggactcaacacagcaaagagccgttctggccgcggccatggagatcatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccttgcacctcccagtggaattccatcgcacactgg +ctcctcactttgtgtgccctctctgaggtcacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattagacccagaaaaactaacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctaatcatcagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcacccgtgaccctgcagggtggtttggcaaactggaccaaagctcc +atacttagacaattgtattggaccaagggccccaatcatgaagacccctttgagtcaatgatcccacactcc +caaagacccatacaactcatgtcactcttgggtgaggcggcactgcatgaaccatcattctacagcaagatt +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgctttggcagccccagtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctccccccgtaatgcccctgg +tgaagtgctactaaatctggagttgggtccggaattaaatccttatctggcacacttatcaagaatgtacaa +cgggtatgccggtggaatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacaacaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttagatctaatggctc +aggtgacgatgtgttcacagtctcctgtagggtgttgactagaccctcccctgactttgatttcacgtatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtctatagaccagatgtacaccagtcctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaggtcagtggtatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------atcaccatcacaaatctgaatggatccccttttgacccctctgaggacatccctgc +ccctttgggcgtgcctgactttcagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagccctggacataatg----aaccagc----aaacaggggacacgatgctgtggt +ccctacttacacagcacagtatactccaaaactgggtcaaattcaaattggca---------catggcagac +tgacgatct---tactgtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttccccg +atatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgccttctctttttcagatcatacatccccc------tcaagggtggcta------tggaa--------- +--acccagccattgattgtctactaccacaagagtgggtacaacatttctatcaggaagctgccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccagacactggccgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggtcgtgcctgccaatggatacttcagatt +tgactcttgggtgaaccagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaatcaatgcagg---cgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgctacag +gctcaaattcaggcaaccaagcagctgcaagcagacatgatggctataaagcagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacagcctactctgggagatt------------------- +-----------------------cacatcaaccacccc---------------------------------a +gtgaggc----------------agaccgacct--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------acgag +tggctctt-----------ctgta------------tcctcctttgccactcagtcttcaaggccgactttg +accacaaccactgggt-----cctcacttgg------cacagcttcatc----------aaattcg------ +-------------------------------actcgcagtactaacctctcccaatcaacagtctccagagc +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753013.1/1-7444 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Clackamas0943 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgttcagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccattagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggct +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcattaatcctcatggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcggcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggtcagagccattgaagacgctgt +attagatctggaggctattgagaacaaccatatgaccactctactgaaggacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgatccctagttcacagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcgacactcacaggagaccaaagggttggtcttattccacgaaatggagt +tgaccattgggacgcctacaaaggtgagagagtagtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgttggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggcc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgttacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agacccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattatatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtggatacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaagaagggaaacacatgaccccagtttatacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagacgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccgcaatt-agcccaaatagttgcagaggatctgttgtcgcccagcgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgtcccttgcacctctcagtggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagagaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgaatctagagctgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgattttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagcggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccccgc +ccctctgggtgtgcctgatttccagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacactgcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggttcctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttctttagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattgaagcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----cctcacatgg------aacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753014.1/1-7273 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Marion0945 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------caccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcataagccgccggctgccatcagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgttgttgggttctggacctcaacgattcatggct +aag---caggaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtttggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaaccctgagggcttgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +agggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgatctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctatgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcctgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaagggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaaatgtccttgaagctgccaaaaagacaattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaggaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggttaaa +actgagaaagtgtatgggaagataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-tcaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgtcccctgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagatccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaactgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctccccccgaaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacactactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaatttgaatgggtccccttttgatccctccgaggatatccccgc +ccccctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacatacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggact---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggct-----cctcacatgg------tacggcctcatc----------aaattca------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---gtggtgccttgcagacagcctttgtcaccccaccttccagcag +agcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgct-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753015.1/1-7536 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Lane0946, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgataccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgttgttgggttttggacctcaacgattcatggct +aag---caggaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataatcggcaaacttaaaccccttaacaccctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaaccctgagggcttgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +gttagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +agggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgatctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcgctggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctaga-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaagggctcagtgatgaggagtacgaagagtata +aaagaatcagagaggagagaaatggcaagtactccatagaggaatatctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaaccgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctatgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgttagagcaaacaatagat +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaggaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggttaaa +actgagaaagtgtatgggaagataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggcttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-tcaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaactgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgaaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctggtaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctagtgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaatttgaatgggtccccttttgatccctccgaggatatccccgc +ccccctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----agccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaaccagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggctgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggct-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---gtggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------t-ttaggat--------gaattg +-------a-----ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK753016.1/1-7521 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.2/Linn0365 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaggaggctcaacggggaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtgcccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacgacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaggttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgctcgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagattaagaagagactgctctggggctctgacttgtccactatgatacggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctccggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagataaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaagaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacccgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttgatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaat--------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK753017.1/1-7474 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Lane0371 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------------------------------------------------------------------ac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaaggccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacggcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgctttcgacaacaactgctacgccttttgctgctgggtgttagacctcaacgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcttatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaatcgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaagacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtaaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgctcgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaacga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctgataacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcaacaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcatccccat +cacgtccgaaagaatgagttctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcgctcaaggacgagttagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatggtccggtgt +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccgtctggtgtgccatgcacttctcaatggaactccattgcacactgg +ctgctaactctctgtgccttgtctgaggtcaccaagctgtcccctgacattatacaagcaaattccatgttc +tcattttatggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtaaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcatggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaactttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagacggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaagctgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagctcgcggggcaattaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gaactaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaagtca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +gaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753018.1/1-7480 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Clackamas0373 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-----------------------------------------------------------------------c +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcgttcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttctgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagctttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccgggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcagccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgacgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggttagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaagctgtgggccgacgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggcgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttatccaccatggtccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtattagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctgactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaggctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaagatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +agtagtagatgttagacaattagaacctgtgttgattcccttacccgatgtcaggaataatttctatcatta +taatcagtcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccctgattttgatttcatattttt +agtgccacccacagttgaatcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +caggg-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaattccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaaa +caatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgtggggcaatcaacgctcccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753019.1/1-6616 |Norovirus GII isolate Hu/US/2013/GII.Pe-GII.4 Sydney/HoodRiver0382 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, partial cds +-----------------------------------------------------------------------c +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacaacg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcaccgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattctatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtaccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacacttac--------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753020.1/1-7417 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.13/HoodRiver0913 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattgcttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctggcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaggtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +tcacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaatagtatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cggagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccgttggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtataa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggagcctattatgatacccttaccagatgttaggaatgtgttctatcattt +taacaatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtgcagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-cttgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagatgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggctaaattgcacag +gtcaggtttcatcactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggtcttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cgggctgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgttacaccgccgtctagtag +gacttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcgca--------ggtttac--t-----------gaaaaggata-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753021.1/1-7391 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.2/Oregon0431 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +----------------------------------ggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgaga----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccattatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggattggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtctacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaagtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgccccttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccttacatctataaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaactttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccctctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccaa- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acccccc----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753028.1/1-7553 |Norovirus GII isolate Hu/US/2014/GII.P4NewOrleans-GII.4 Sydney/Pima0257 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacctaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctatccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggtgaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctccccagacactcttaagaaactatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +aag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacattttcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgttcccgtggtgatggggggaattggtttggtgctaggattcaccaaggagaagattgggaagatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttctttccgaaaaaggaggaggcaaatgagctggccatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaatcacatgaccgccttactcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +aggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggttctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattattaccactaatttggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccgcagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgagtttgaactacagggcc +cagctctcaccgtcttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacaccatgagagttgggaaacagctcaaggatgtcaggaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgagggttgacagagtccaaaacgccgccgtgcagaccaacaatgagctggctggtgctc +tgcaccatttgaggtgcgccaggattagatactatgtcaagtgtgtccaagaggccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaaa-- +-gat----gatgagg---agtttatcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcgttttcaagcaagggcctcagtgatgaagagtacgatgagtaca +agaggatcagggaggaaaggaatggcaagtactccatagaagagtaccttcaggatagggacaagtac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaagaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagggcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +atagtgagaaactcaattttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +ggttctgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccctatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcgcctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccacgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaagctacacttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagactaaa +ttctggagatcgtccacaacatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagttatgagggaacagttgaagccattcacagaacccaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccattagagttggcatg +aatatgaatgaggacggccccatcatcttcgagaggcattccaggtacacatatcattatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacacct-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaatttgtccccagacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattaacagcaaagctc +agggaatatggattaaaaccaacccgccctgataaaaccgaaggaccacttgttatctctgaagatttaaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccttctgaaacaatgattccacactcc +caaagacctatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctaaaagagggcggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtcattga +cccctggattagaaacaattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccacttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattcttgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccctagccaggtcactatgttcccccatat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcctgccgagtcctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccgattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaacttggcttcccaaaactggaacagttacgatccaacagaagaaatcccagc +tcctctagggactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgaca--------cgc-----------ggccacaaggctacagt +gtacactgggagcgccgactttgctccaaaactgggtagggttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcgggcaga-agtact------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaactcctcttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagttcttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggagatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggcacccgatgccaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaagctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggacca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttcc----------t-tt----t--------tcttc- +-------a-------gt---gtcac----------------------------------------------- +------------------------------------------------------------------------ +- +>MK753029.1/1-7146 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/SanDiego0043 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------aggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgtcttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgtacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagattac +t-ctcgctgggattcaacacaacaaagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +tcctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagaacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccggaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttacttcaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcattcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753030.1/1-7545 |Norovirus GII isolate Hu/US/2015/GII.P16-GII.4 Sydney/Marin0375 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagagaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcgcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaattaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgccgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggtagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtacctccaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagaggaccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggcgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacagtt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaat +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaaaaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agcaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaatgctccagg +tgaaatactttggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctcttgcaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgagaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----actcaaatca------aactgtttcaac----------aag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgt---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------t---------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK753031.1/1-7239 |Norovirus GII isolate Hu/US/2016/GII.P2-GII.2/Yolo0348 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------ggggacgaaccaaccgtg +atgtttagta----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggagaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattaacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgttgttgggttttggacctcaacgattcatggct +aag---caggaggatgattagtaggactactggcttctttaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcattctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaaccctgagggcttgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattaaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatggaatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccactaactctaaattgtgacaggattgaaaacaa +agggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaagacgcctatcgatctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaatcgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgcccaagaggccatatactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------agccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aattcatcgtctcctcagatgatattaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaagggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctatgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggctccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcttgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcccgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggaacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggtaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttgggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattattaatgtgttagagcaaacaatagat +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaggaggggaagcacatgaccccagtttatacagctgcccttaaggatgagttggttaaa +actgagaaagtgtatgggaggataaagaagaggttactttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgcgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-tcaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaatgaaggattaccatcgggtgttccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggtcccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaactgtcacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgttttggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---tccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagagtgttgactagaccttcccctgattttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaatttgaatgggtccccttttgatccctccgaggatatccccgc +ccccctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaatcaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggtcgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctaagtaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaaccagagggcagaatttgattttaatcagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggttctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggct-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccagtcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---gtggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgtaggcagccgctttttgcac +acccccca---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753032.1/1-7572 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/SanJoaquin0116, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgatg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaatc +ggacgtggccaacacagcattcagtgttccaccactgagcctgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgttatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaatcaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +acacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctatggtggctccgtgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggccctcaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggtaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctagccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaggcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatactcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagctgtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacagttagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacggttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----ct-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctacgttacagtggctcacactggccaacatgatttggtcattccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcagcatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------ccttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgtctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttacttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MK753033.1/1-7486 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.1/Maricopa0357 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagaa---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaggaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaactgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtataacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgcgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttccggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaagttcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagagggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactatcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aagcctccaagaccaagtgtattggaagctgccaaacaaaccattatcaacgtcctcgaacaaaccttggac +cctccacaaaaatggacatacgcgcaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aaccttatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagtagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggtcctgaactaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatttgagtcctggtcaaattacaatgttccctcatgt +gattattgatgttagaactttagaacctgtccttttgcctttaccagatgttagaaataatttcttccatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctctcagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgtccctctccagactttgattttaattactt +ggttcccccaactgtggaatctaaaaccaaaccatttaccctgccaatattaaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagtcccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcaccacacaacttgtaccatcaaacatctgcgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagttactagccaga---ggaatcctg------- +----------------------acaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaattcacacccaagttaggctctgtggttttgggta---------cttgggaaga +acatgatct---tgatcttaaccaacccacca---------------------------gattcacacctg- +--------ttggtctg---------tatgatacaaaccac---------tttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaatatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca------cttaaaggaggcac------ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +agtgc---------agtaatggctggagcttttgtagcaggccttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgacaaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +acgaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caacaccaggactgttgatttgcctaggaaaacatcaaccacacca--- +gccccca----------------cacctatatctagat--------------ctag---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gtcagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcactgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggcttag--t-----------gaaaaga----------- +---t-g-att------------------------tttcttc----------ca-------------ctt--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK753034.1/1-7494 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.1/SaltLake0124 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactccagagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaggaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gggcgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +tcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggacttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggaattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggctgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcttg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgtaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgttaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacatctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaggaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcctctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgcgaagaggaggagatcaaaattcgtcaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaagctggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagtctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaagttcagattcataaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttagaagagggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagcttatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcagggtcgc +atggtcggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgcggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacctattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aagcctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgataaaaccacctccagcgggcacccccat +cacgtccggaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaactcgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaagaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttgaatttggaattaggtcctgaactaaatccattcctggcacacctttcaagaatgtataa +tggttatgctggtggggttgatgtgcaggtgctgcttgctgggaatgcgttcacagc---gggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatttgagtcctggtcaaattacaatgttccctcatgt +gattattgatgttagaactttagaacctgtccttttgcctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctctcagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggttctcactcgcccctctccagactttgatttcaattactt +ggttcccccaactgtggaatctaaaaccaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtatacaagccctaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcaccacacaacttgtaccatcaaacatctgcgcctt +gcgag-----------------------------------------ggcgcatcaacgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgacc----------------------------------accat-------------------- +-------caatggaacttgcaggttacaaacgcaaatgggacccccttcgaccccactgaagatgtccctgc +accattgggcacgccggatttcttggcaaacatctacggagttactagccaga---ggaatcctg------- +----------------------acaacacttgc--------cgt-----------gcccacgatggggtctt +ggcaacctggagccctaagttcacacccaagttaggctctgtggttttgggta---------cttgggaaga +acgtgatct---tgatctcaatcaacctacca---------------------------gattcacacctg- +--------ttggtctg---------tatgacacaaaccac---------tttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca------ctcaaaggaggcac------ttcca--------- +--acggtgccattgactgtctactcccccaggagtgggtccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggattcatcacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +agtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaacta +cagcagg---------------------------------cctctttcaaccatgacaaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatggttgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc---------------------caacaccaggactgttgatttgcctaggaaaacatcaactacacca--- +gccccca----------------cacctatatctagat--------------ctag---------------- +------------------------------ttcttctgcttctactgtttct------------------ac +ccgctcaa-----------caatt------------gtcagcgggacttctggcc----------------- +-------------ttt-----cttctttgac------taggagctcttt-----------ta--------a- +------------------------ttcccagcccacctcc------------t------------------c +ttcttc---------------------------------------tcggactagcgagtgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcactgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------tgtttag--t-----------gaaaaga----------- +---t-g-att------------------------tttcttc----------ca-------------ctcttc +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK753035.1/1-7530 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.2/Washington0353 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggagactcaacggagaggcgtt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agatcagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaagaggcaatgactatatagtcgttggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagacgttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtgggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggacttactttcctccgaaggacggtgactcgtgacccagctggttggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgttactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgacgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatattaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---gtggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-attt---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK753036.1/1-7480 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.12/SanDiego0142 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttctaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactccagagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaatgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtccttgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaagtgcaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcaacaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattatct +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactcattccaccaagtttaccccaaaattgggtgctgtacaaattggca---------cgtgggaaca +agatgatgt---acacatcaatcaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacatttcctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacttgtatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaaaacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctaatgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----ctgcttcagc------taggagctcttc-----------ta--------gc +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK754442.1/1-7555 |Norovirus GII isolate Hu/US/2015/GII.P16-GII.4 Sydney/BaltimoreCity0391 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctttacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagttgaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacatctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagtagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggtcacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggggtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaact-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagacttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtttttacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagaacagatggttcaaca--------cgc-----------ggtcacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagggttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttcttcgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggccggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctct------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------cagt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MK754443.1/1-7457 |Norovirus GII isolate Hu/US/2014/GII.P16-GII.13/Washington0967 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatgcc +tcc-----------------------------tcccccacctaacgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccctacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcactgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +attagatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtatacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagacatgtggaaggacgccttcaagtcggacttttcacatatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttcactgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccacctttaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gtaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gtttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggtgtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttaggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaacgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgcgcttcacttgacaaaaccacctccagcgggcacccccac +catgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcataacactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactaggggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctctcttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtggatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatgttgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattggaacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaataccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaataccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcgattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcaaactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK754444.1/1-7477 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.4 Sydney/Baltimore0201 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +-------aatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcatattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaggaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggctagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactgat +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagagccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagtaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaatcgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctttaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcgagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaagaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagtctgttcataacatcaactcatgtaatccccgcaggtgtaacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccagggga +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgacgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggctcctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggcttccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tctttttacggtgatgacgagattgtcagcaccgacataaaattgaaccccgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttaaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcattgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaaccgatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtgccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcccagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagtgctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccctagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccactcaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttatttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------gccatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttgggg--------------atgc---------------- +------------------------------tgttcctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgc-----actcaagtca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttagct- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK754445.1/1-7513 |Norovirus GII isolate Hu/US/2017/GII.P16-GII.12/Somerset0204 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccactaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcgtaggaaaaattaaaccattaaatatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaaacggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaataacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagtccaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agacaagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgatcaaaccctggac +cctccacaaaaatggacctacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaagttg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccgatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggccgggaacgcgttcacggc---tggaaaattggt +acttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagtcgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacaag---------------------------------catctttcaaccatgacaaagagatgttgcaa +gttcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcttctaatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aaatcc-c--t---gtcgac---------------------------------------------- +------------------------------------------------------------------------ +- +>MK754446.1/1-7488 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.4 Sydney/Washington0207 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +----------------------------c-gacgctaccgtcgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaatagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccgcctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactcttaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaattgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaagatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaactggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggagggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcgactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcactaaaaccaaa +ttctggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggttctgacttgtccaccatgatccggtgc +gctaggtcgtttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacctcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccagactgtcccctgacattatacaagcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttaaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctatctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taatcaatcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaataactatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcatgctcactcaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggt------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK754447.1/1-7502 |Norovirus GII isolate Hu/US/2018/GII.P16-GII.12/Baltimore0213 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttctaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactccagagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaaaaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtcccctcaccttaaattgtgacagaatcgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggacttccctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacgatggctccacatatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------atatacaagaactctggt +cgaaaccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtccttgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacatccagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtgcaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgttagaaataacttcttccatta +caatcaacaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattccaccaaatttaccccaaaattgggtgctgtacaaattggca---------cgtgggaaca +agatgatgt---acacatcaatcaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacatttcctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccaacacttgtatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----ctgcttcagc------taggagctcttc-----------ta--------gc +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tcctcg +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK756033.1/1-7505 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0771 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------agat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaaggccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacgtattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgccaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataagaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggactgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttttatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagctcccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagtgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatccagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK756034.1/1-7513 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0766 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatggtcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatctgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgctttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagttaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattgggacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcaatacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK756035.1/1-7511 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0787 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---agtacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaagcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaggctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgatccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +cagcaagcatcctttcaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggtactctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------a +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK756036.1/1-7507 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0788 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------ccctcaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagtagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcttatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccgcaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggttgataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgttaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcatctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggacttcgaggcccccccaagcatatggtctaggatcgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagccataggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactctcgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccatccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatga-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaggggcccctgatcatcagtgaagatttgcac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccccgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggacccccc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK756037.1/1-7406 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0792 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------ccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttctgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctctacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaatacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattagaagcagccaaacaaaccattatcaatgtcctcgagcaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgtcagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaagctgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +aacaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK756038.1/1-7501 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4 Sydney/Alameda0791 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaatc +ggacgtggtcaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccgggatagtggaatctatgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +acggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccctaccggagagctcatgcctcttgcagccaggatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccatcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttcttttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgcccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK588004.1/1-7506 |Norovirus GII isolate Hu/USA/2017/GII.P7-GII.14/RGDS-1012 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------gcgtctaac-gacgctaccgctgcccttggcagtcaa---aaatctgtcaat +g------ac----agtgaaaatgccaccccttctaacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggtacc-------------aaaacaccc +agcagcga----------------tcagcattgccccacagttaagatcggacctaaaacattaacaatccc +ccc-----------------------------tgaacccccaaatgg------tgaggac------accgta +caatttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaacactccatacactgtccccccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggggtccacaaaccaccggcggctataagtctcgcgacgatagagctcacccctatatcactctactg +gagacctgtttacaccccca---actacttggtctctccagacacactaaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaatttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatctccagaaccaccggcttctttaaaccataccagtcttggaatagaaaacctct +cccaactgttgatgatggaaagattaagaaggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaaaccaatcaaagacctactaggcaaactcaagccattgaatctactacacttgctcgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggagcttttc---aatgtcttctggactccgcc +agatgtctctaatttcatagcctccttgataggtgactttgaattgcaagggcctgaagatttggctgtgga +gctcgttcccgtggttatgggtggcgtagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +tatgaaatggttcttcccgaagaaggaggagaaggctgagatggagaccttgagggcgattgaagacgctgt +ccttgatatggaagctatagggaacaaccacctcacaaccctcctcaaggacaaagacagcctcacagcttt +catgaaaacactggatctagaggaggagaaggcgaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctagatccctactacataaggccaaagaggagat +gttcagcaggatcagaccagtagtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgatcagagagtcggactcgtcccacgcaatggtgt +cgatcactgggacgcctacaggggagagagagtggtcttgtgggacgactacggtatggggagccctgttaa +agacgccctgacactgcaagagttggccgacacgtgtccagtcaccttaaattgtgataggatcgagaataa +ggggaagatgtttgatagtgatgtcatcataattacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagatttccctggccagcctgacatgtggaaagatcatttcaagccagacttttcccacattaagctga +cactagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggcaccatgcggtctctga +cccaggggtccctaactgcgagagttgcaggccttgtccatgagaggagggacgagttccagctccaaggaa +atgacctccaaacatacaattttgacaccaacagagtctccgcatttagaaaattggccgcggacaacaagt +atgggatcatggagacgatgagagttggcgcagcactcaagagtgtgaagaccttggaggatcttaaagccg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaatg +gtaaaggctcagtctctgttgacaaagttgaagacaatgcttcccagactgtgaacgaggtacattcagcac +tcctcagactcaggcaggcgagggccagatactacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtca---------------gtagga------tctccaggaggttctgct +gggaaaggtgggtcaaaccgaccgaaac-------------ccaggaggtgaatgagcctga-----aaagg +aagtggtccaaggtg---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaaggaacggcaagtactccattgaggaatacctgcaggaccgagaccgctac---t +atgaagaagtagcagtcgctcgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaggaagcagaggaaggaggaaaggggcgtgcttggcttggtcaccggctcagaca +tcagaaagaggagaccagacgatttccaaccaaaaggcaacctgtgggcagatgacaccagaagtgtggact +acaatgaaaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacgacacacgtcctgcctaaagggatcaaggaacttttt +ggagttgaaatcaaacagatccaaattcacaaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgttacaggactcgtgctggaggaaggcgccccagagggcactgtctgttctgtactcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcaaagaacatggaccttggcaccggccct +ggtgactgcggttgcccctacatctacaagcgtggcaacgacattattgttgctggcgtccacaccgcagca +gcccggggaggcaacactgtaatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggtacatactgtggtgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggtacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggcccctccctgcagcaagtcatgagagaccagttgaggcccttcacagaacccagaggc +aaaccacctagaccagcaatcttagaggaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaactacctctagtggtagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcttctaaagcc +aacctcatgtatgagcaggccaaacatatgcagcccgtatatacggccgcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaaaaggcttctatgggggtcagaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggacagtatgaaggcaagctgtatagcccttccttgcagggtaggaatg +aacatgaatgaagatggccccatcatatttgataaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcatcctctctgccgccatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggacctcttggcacctagccaacttgatgttggcgacttt +gtcatctcagtccaggaaggcctaccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atactcactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgcttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttaacacaaaaactc +agggagtatggtctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgcacgagagcatggttccacattcc +cagcgggccacacaactcatggcccttcttggtgaggcctcgttgcatggtcctcaattttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +aggtggatgaggttctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcaactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggtcaacagaatataattga +tccctggattagaaacaattttgtacaagcccctgctggcgaatttacagtctcccctagaaattcccctgg +agaactcttacttgatctggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcaaatagtactggctgggaatgcgttcacagc---tggtaagatcct +gtttgccgccatcccacccaccttcccctacgaaaacttgtcacccgcccaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgctcttgccaatgccagatataagaaatgttttctatcatta +taatcagaataatagt---cccaaacttaggcttatagctatgctttatactcctctgagggctaacaattc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgcccttctccagatttccagttcactttcct +ggtcccacccacagttgagtctaaaactaagaacttcaccctccccgttctcaaagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggatcaaatgtacacgagcaggaatgaaaacatcgttgtccaacccca +aaacggcagatgcacaactgacggtgagctgcttggcactaccatcttacagtctgtgtctatttgcaattt +caaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattgcaactcaccaacttggatgggtcacctatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------gga-----caacgccacc--------aga-----------gcacatgatgcacaaat +tgacactgcgggtgacacgttcgccccaaaaattggccaggttcgatt---ta---------aatcaagctc +cagtgattt---cgacctacatgaccctacaa---------------------------aattcacgccta- +--------ttggtgtcaatgtgg---atgacc---------agcaccctttcagacagtggtccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagccccagctgtgacaccgctcttccctggcg +aacaaatcttgttctttaggtcatacattccaa------gcgccgggggcca------cacgg--------- +--acggtgctatggactgtttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgaaatcgcactggtgaggttcatcaaccctgacacaggaagagtgctctttgaagcaaaattgcacaa +acaaggtttcctcacaattgcagcatctggagaccaccctattgtgatgcccactaatggttatttcaggtt +tgaagcttgggtcaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +aattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgttacttccagcttg +ggctcacttgtgggtgctgg---agccaacgccatcaatcagaaggtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgacaaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttaaagcgcctatgacgcagatccttgactggaatggt +tctagatattgggctcctaactccatgaaaacaactggctattcaggcacatttgcttcccaaggcatta-g +aa-----------gttcccctcatctgtc-------------ta---------------------------a +tcaaaccc--------------caagtgctgttaagtc---------------------------------- +-------------------------------------cattaaatctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagctttccttctactgccccctcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----c---tccag-------------------gcccagcactgtgt---------ccacaaagac +ctccac-------------------att--------------gtcaaggacaagtgactgggtcaggggtca +aaatgagatgtttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-tccccttt---t--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK729086.1/1-7496 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L335/CHN/2015 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcgaatgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gtcccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgttcagca----------ctgt---aggtggtgtgtctggcctacctgagcttacaacagttggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatctatcattatggtctgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gaggcctgtttacacgcctc---agtaccttatatctcctgacaccttgaggaaactccatggtgaattatt +tccctacacagcctttgaaaacaattgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---cagaaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggttgcaaacatcgttctgtgtgcattgtcatcactgttcac +tagacccattaaggacataattggcaaacttaaacccctcaacatcctaaacatcctggcttcatgcgactg +gacctttgctggcatagtagagtcactaatcctctttgctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacctctcctcggtgactacgagctgcaaggccccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcttgtaaagatcttggagcctacggattggagatcctgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaatgaactggctatggttagagccattgaagacgctgt +gttagacttggaggccattgagaacaaccacatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctagaaagctatccaccaaatcagcctcccccgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcacgttccttggttcatagggccaaggaagagct +ctccagcagaccaaggccagtcgtcctgatgatctccggcaaaccagggataggaaagacccatttggccag +agaactggcaaagaaaattgcctcaacactcacaggagaccaaagggtgggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggagagagagtggtgctctgggatgactatgggatgagcaaccccattca +cgatgcgctgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcaatcataatcaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaagcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcgccctgacttctcacatattaaattgc +aacttgcaccacaaggtgggttcgacaagaatggcaacaccccacatggtaaaggagtaatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcatgagagattagatgagtacgagttacagggtc +cgtccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgccgaaaacaagt +atggtctagtggacacgatgaaggtgggcaaccagctcagaaatgtcacgaccatggatgagcttaagaagg +ctatcaaaaacatcatgatcaggaagtgccagatagtctatggtggcaacacttacacgcttgaatctgatg +gcaagggtaaggttgtagttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacatcaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttttggt +ccagaccattaactgaagatgtagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcagatgatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaaggtctcagtgatgaggaatatgaagagtaca +agaggatcagagaggagaggaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagatttctgcgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaaaaggaacccagatgacttcaaaccaaaagggaagttgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcgc-ccagtcttttcataacatcaacacatgtcataccccaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgaattctgtcgactgagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgactatgagaatacaagggcgc +acagtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctacatttacaaaaggggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacacagtcatctgcgccacgcaaggcagtgaaggtgaggccacactcgagggtggtgac +aataaaggaacatactgcggggcaccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaag +ttctggaggtcctccacaacaccactcccacccggcacgtatgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaaaccattcactgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgctagaacaaacaatagat +cccccacaaaaatggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtgggttcccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcgtcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagctggtcaaa +actgagaaagtgtatgggaaaataaagaagaggttgctttggggctctgatctggccaccatggtgcggtgc +gcacgctcctttggcggtttgatggacgagctcaaggcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaataatctttgagaaacactccagatataggtaccactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgtcccctgcacctctcaatggaactccatcgcacattgg +ctccttactttgtgtgccctttctgaagttacagacctctctcctgacattgtacaggccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattagatccagaaaagctgacggggaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctgatcattagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcacccgcgaccctgcggggtggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcacttttgggcgaggcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtaatatccgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgctttggcagcccctgtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtacgccggtgggatggaggtgcaggtcatgctggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacaacaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgtagggtgttaactagaccctctcctgatttcgacttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaaggaacaacacaacttcaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgctcac--------- +-----------ttgcatga-----------------------------------------------ta---- +----atgatcacc----------------------------------tatacaat----------------- +----------------gtcaccatcacaaatttgaatggatccccttttgatccctctgaggacatccctgc +tcctctgggcgtacctgacttccagggaagggtttttggtattatctcccaaa---gagacaa--------- +-----ac-----acaatagccctggacatagtg----aaccagc----aaacaggggacacgatgctgtggt +ccccacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cactgtcaaccaaccagtca---------------------------aattcactccag- +--------ttggactcaatgacactga------------------acatttcaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtgtttccagggg +agcgcctactctttttcagatcatacatccctc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaggagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcaagtaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctacaagcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctgggagatt------------------- +-----------------------cacatcaaccgctcc---------------------------------a +gcgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaaggccaactttg +gccacaaccactgggt-----cctcacatgg------cacagcttcatc----------aaattcg------ +-------------------------------actcgcagtactaacctctcccagtcaacagtttctagagc +cacatc---------------------------------------tagaactggtgaatgggttagagacca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagtag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC342059.1/1-7557 |Norovirus GII Hu/JP/1999/GII.PNAe-GII.12/No35-Saitama-99-1 genomic RNA, complete genome +----gtgactgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgaaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-gccccgagggacaaaccacca +aaa---------------------cccccacgaccacctaccccagagctggtc-------aaaaagatccc +acc-----------------------------ccctccgcctaacgg------agaggatgaaccagttatt +tcgtacagcg----------ccaa---ggatggtgtgtctggcttgcctgaactcacaacagttaggcaacc +ggatgtgcactctacggcgttcagtgtccccccactcgaccagagggagaatagggacgccaaagaaccact +aactggcaccatcctggagatgtgggatggggagatttatcattatggcctgtacgtggaacgagggctagt +gcttggtgtacacaaacccccagcggcgattagcctcgccaaggttgagatgacacccttgtctctgtactg +gagaccagtgtacaccccgc---aatacctcatagcccctgacacgctcaaaaagctgcatggtgagttatt +cccctacacagcctttgacaacaactgctatgctttctgttgttgggtcctagacctaaacgactgctggct +gag---caggagaatgattcagaggacgaccggcttcttccgaccataccaagagtggaatagaaagcctct +ccctactatggatgactccaagctgaaaaaggtggccaacatattcctgtgtgctttatcatcattgttcac +cagacccataaaggacataataggtaagttgaggcccctcaacatcctcaacatactagcatcatgtgattg +gacttttgcaggcatagtggaatcattgatcctcctggctgaactcttt---ggagtgttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacaggggccccaagacctcgctgtgga +actcgtgcccattgttatgggggggataggtttggtgctgggattcaccaaggagaaaatcggtaagatgct +atcatctgctgcctccacgctgagggcctgcaaagaacttggagcctacggactggagatactaaaactggt +catgaaatggttcttcccaaagaaggaggaggcaaacgaactggcaatggtaagagccattgaggacgctgt +tcttgaccttgaggcaattgagaacaaccacatgacagccttgctcaaggacaaggacagcctagcaactta +catgaggaccctcgacttagaggaagagaaggccagaaagctttctactaagtctgcttcacctgacattgt +gggcacaattaacgcccttttggcaagaattgcagctgctcgttccctcgtgcatagagccaaagaagaact +atccagcaggccaaggccagttgttattatgatctcaggcaaaccaggtattgggaagacccatctggccag +ggagttggcaaagaagatcgccgctaccctatcaggagaccagagggtgggtcttatcccacgaaatggagt +cgaccactgggacgcttataaaggtgagagagtcgtcctttgggatgactacggaatgagcaaccctgtcca +tgatgctcttagactccaagagcttgctgacacctgccctctaacactaaattgtgacaggatcgaaaacaa +aggcaaggtttttgatagtgatactataatcatcaccaccaatttggccaacccggctccactggactatgt +caactttgaagcgtg-ctcaaggcgcatcgacttcctcgtgtatgccgaggcccctgaagttgaaaaggcaa +aacgcgactttccagggcagccggacatgtggagaagtgccttcagtcctgacttttcacacatcaaaatgc +aacttgctccccaaggtggcttcgacaagaacggcaacaccccgcatggcaaaggagtcatgaaatctctaa +ccatgggttctctcatcgcccgtgcctcagggctcctccatgaaagactggatgagtacgagttgcagggac +ccactctcacaaccttcaacttcgaccgcaacaaaatacatgccttcagacagctcgctgccgaaaacaagt +atggattggtggacacaatgcgggttgggggccaactcaagggagttaagaccatgccagaacttaagcaag +ctctcaaaaacatttcaatcagaaggtgccagatagtctatgggggttgcacctatatactggaatctgatg +gcaaaggcaatgtgaaggtcgaaaaggtgcaaagcactacggtgcagaccaacaatgagatggccggcgcac +tacaccacctaaggtgtgccaggatcagatactacgtcaagtgtgtacaggaatccatctattccatcctcc +aaatcgctggggctgcatttgtgacaacgcgcattgtcaagcgcatga------acatacagagtctctggt +ccaaaccaccggtgggagacgcagacga--------gacggccactgaagaaggctgcccaaagcccaaa-- +-gat----gacgaag---agttcatcgtctcgtccgatgatattaaagctgagggcaagaaggggaagaaca +agtctggccgaggcaagaaacacacggccttctcaagcaagggcctcagcgatgaagagtatgatgagtaca +agagaattaaggaggagagaaacggcaagtactctatagaagaataccttcaggacagagataagtac---t +atgaggaggtggccatagccagagcaactgaggaggacttctgtgaggaagaggaggccaaaatccggcaaa +gaatatttagaccaactagaaaacaacgcaaggaggaacgcgcctctctcggtctcgttacaggctcagaga +tcagaaagcggaacccagatgacttcaaacccaaaggaaaattgtgggccgacgatgacaggagcgtcgact +acaatgagaaactcagttttgaagccccaccaagcatttggtctagaatagtcaactttggttctggctggg +gattttgggtctccc-ccagcttattcatcacatcaacccatgtcatacccccgggcgcccaggagttcttt +ggtgtgtccgtcaaacaaattcagatccataaatcgggagagttctgccgtctgagattcccgaaaccaatt +aggactgatgtgactggtatgatattagaagaaggagccccagaaggaactgtggccacactgctcatcaag +aggccgactggtgaactcatgcccctagcagccaggatgggcacccaggcaacaatgaagatccagggtcgc +atggttgggggccaaatgggcatgctactaacagggtccaacgctaagagcatggacttgggaacaacacca +ggtgactgtggctgtccttacatctacaaaagaggaaatgactatattgtcatcggagtccacacagcagcc +gcccgcggtggaaacacagtcatatgtgcaactcaggggagcgaaggtgaggccatacttgaaggaggcgac +aacaaagggacctactgtggtgcaccgatcctaggccctggcaacgcccccaagctcagcacaaaaacaaaa +ttttggagatcttccactgcaccactcccaccgggcacttatgagccagcttacctcggtggcaaagacccc +agggttaaaggtgggccttccctacaacaagttatgagagaccagctgaagccgttcaccgagccgaggggc +aaaccacccaagccaaatgtattagaagcagcaaagaagaccatcataaatgtgttggagcagacaatagac +cccccccaaaggtggtcgtacgcacaagcgtgcgcatccctcgacaaaaccacatccagtggccaccctcac +cacattcggaaaaatgactgttggaatggagaaaccttcacaggcaaattggcagatcaagcttcaagagcc +aacttgatgtacgaggagggaaaaagcatgaccccagtgtacaccggagcgctcaaggatgaattagtgaaa +acagataaaatatatggctcaatcaagaagaggctcctatggggttcagacctggcaacaatgatccggtgc +gcacgggcgtttggggggctgatggacgaacttaaggcccactgcatcacattgcctgttagggtaggcatg +aacatgaatgaggatggccctataatatttgagaaacattctaggtacagataccattatgatgcagactac +t-cccgctgggactcaacacaacagagggcggtgttagctgcagccctagaaattatgg-tcaaattctcac +cagaaccacattt-ggctcagatagttgcagaagaccttttgtcccccagtgtgatggatgtcggtgacttc +aagatatccatcaatgaaggactgccttcgggagtgccgtgcacatcgcagtggaattccattgcccactgg +ctcctcaccctctgtgcactttccgaggtgacagacctgtcacctgacattatccaagccaattccttgttc +tccttctacggtgatgatgaaattgtgagcactgacattaaattggacccagaaaagctgacagcaaaactg +agggagtacggactcaaacctacccgacctgacaaaactgaaggacctttaatcatttctgaagacttaaat +ggcctgaccttcttacggaggactgtgactcgagacccagctggttggtttgggaaattagaccagagctca +atacttagacaaatgtactggaccaggggccccaatcatgaagacccttttgaaacaatgataccacattcc +caaagacccatccagctaatgtcgctcttgggcgaagcagccctacatggcccatcattctacagtaaaatc +agcaaattggtcatcacagagttaaaggaaggtggcatggatttttacgtgcccaggcaagagcccatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatgttataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgtaactcgcctgg +ggaaatcctactaaatttggaattgggccctgaactgaatccatacctggcacacctttctagaatgtacaa +tggttatgcaggtggggttgaggtgcaagtactactggctgggaacgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcactttccattagaaaatataagccctggccaaataactatgttccctcatgt +aattattgatgttaggactttagaaccagttcttttgcccctcccagatgtcaggaatagtttctttcatta +caatcagcaaaatgaa---tcgcggatgagacttgtagcaatgctttatactcctcttagatctaatggctc +tggtgatgatgtgttcactgtctcttgcagggtgcttactcgaccttcccctgattttgattttaactattt +ggttccccctactattgagtctaaaactaaacccttcacactccccatcttgactataggggagctaaccaa +ttccagg---ttccctgcgcccatagatgagctctacaccagtcccaatgagagtttggtggtgcagcccca +aaacgggagatgcgcgctggacggggagttgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gtcgaatcaaccaga----------- +-----------aggtaag------------------------------------------------tgg--- +--agagaaccatg----------------------------------tctggaat----------------- +----------------atgcaggtcaccaacaccaacggaaccccttttgatccaacagaagatgtcccggc +ccctctaggcactccagacttctctggcaagctctttggtgttttgagccaga---ggga------------ +-----cc-----acgataatgcatg---------t------agg-----------agccatgatgcagtgat +tgcaaccaactctgccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaga +agatgatgt---acacatcaaccaacctacca---------------------------aatttactccag- +--------ttggcttatttgaacatga------------------agatttcagtcagtggacactccccaa +ctattctggtgcc-ttaaca------cttaatatgggattagcccctcctgttgcccccacctttcctggtg +aacaaattctcttctttagatcccacattcct-------cttaaaggaggtg------tagca--------- +-gacccagttattgattgtcttttgccccaggagtggattcaacatctttaccaagagtcagccccttcaca +atctgatgtagcactgattaggttcacaaatccagacacaggacgtgttctatttgaggcaaaattacatag +gagtggttacattacagtggccaacactggtagcagaccgattgtggtaccagctaacggttacttcagatt +tgactcttgggttaatcagttctattctctcgcccccatgggaactgggaacgggcgcagg---------ag +ggtgc---------agtaatggctggagcttttatagcagggcttgctggtgacatagtcaccaacagcgtt +ggctcacttgtgaacgccgg---ggctaatgcaataaatcaaaaagtagactttgaaaataacaaacaa--- +------------------------------ttacaacaggcttctttcaatcatgacaaagaaatgctgcaa +gctcaaatccaggctaccaaacagctacaggctgaaatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagtcaatgcacccatgactcaggtcttggactggaacggg +actaggcattgggcccccggtgccacaagaactaccgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgcc-agaacagttgacttg---------------------------------a +ccaagag----------------aacatcagccacgccagcccc---------------------------- +------------------------------tatgcctgtttctagacccagt-------------------- +----tcta-----------ctgtc------------tccactgtctccacccgctcaa-------------- +-ccttgattagcgggt-----cctctaaccc------ttcttcttcagc----------tagg--------- +----------------------------------agttcctctagcgtctcttcccaacccacctcct---c +ctcctc---------------------------------------tcggaccagtgagtgggtgcgtagtca +aaacagggtgctggagccttatatga---gaggggcgctgcacacagcatatgtgacgcccccctctagtag +ggcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcgt------------tcaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatga-------- +---------------------------t------cttttctt------cc-tt-------------tctttt +g-aaa--a-t---ttct---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaa-------------------------------------------------------- +- +>MK641589.1/1-7529 |Norovirus GII isolate CA-RGDS-1023, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aaatctgtcaat +g------ac----agtaatatagccaccccttctaacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggtacc-------------aaggcaccc +agcagtga----------------tcagcattgccccacagttaagatcaggcctaaaacattgacaatccc +ccc-----------------------------cgaacccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactgtaattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaatactccatacactgtccccccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggtaaagc +tctaggggtccacaaaccaccggcggctataagtctcgcgacgatagaactcacccccatatcactttactg +gagacccgtctacaccccca---actacttggtctccccagacacattaaaaggcctcgctggtgaaaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatctccagaactaccggcttctttaaaccataccagtcttggaataggaaacccct +cccaactgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagatctattaggtaaactcaaaccattgaatctactacacttgcttgcgtcctgtgattg +gacgtttgcgggtatagtagagacagtcatcttaatggcggagcttttc---aatgtgttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaaggtcctgaagacttggctgtgga +gctcgttcccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgcggcatcaacactacgggcgtgcaaagacttagggaactatgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgacatggaagctatagggaataaccatctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaaaaccctggatctagaagaggagaaagcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctagatccctactacataaggccaaagaggaaat +gtttagcagaatcagaccagtagttgtcatgatctcaggcagacctggcattggaaaaactcatatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccaaagggtcggactcgtcccacgcaacggtgt +cgatcactgggatgcctacagaggagagagagtagtcttgtgggatgactacggcatggggagccctgtcaa +agacgccctgacactgcaagaattggccgacacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacttagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgatttcctggtttatgcagagtcaccagaaattgaaaaggtca +agagagatttccccggccagcctgacatgtggaaagaccattttaagccagacttctcccacattaagctga +ctctagccccccagggtggatttgacaagaatggtaacaccccacatggcaagggcaccatgcggtccctaa +cccaggggtccctaaccgcgagagttgcaggccttgtccatgaaaggaaggacgagttccagctccaaggaa +atgaccttcaaacatacaattttgacaccaacagagtctccgcatttagaaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcgcagcgctcaagagcgtgaagaccttggaagatcttaaagttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaattctaagtaccgagtctcttccaacg +gtaaaggctcagtctctattgacaaagttgaagacaatgcttcccagacagtgaacgaggtgcattcagccc +tcctcagactcaggcaggcgagggccagatactacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcatttgttgtta---------------gtagga------tctccaggaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagcggcccaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgatgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagttgctcgagcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaggaagcagaggaaggaggaaaggggcgtactcggcttggtcaccggctcagaca +tcaggaagaggagaccagacgattttcaaccaaaaggcaatctatgggctgatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccactaggcactggttggg +ggttttgggtgtcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattagggaacttttt +ggagttgaaatcaaacaaatccaaattcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggagggcgccccagagggcactgtctgttctgtgctcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggagcaaacgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgcccctatatctataagcgtggcaacgacatcgttgttgcgggcgtccacaccgcagca +gcccggggaggcaacactgtgatatgtgctacccaggggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggtgccccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcagcaagtcatgagagatcagctgaagcccttcacagaacccagaggc +agactacctagacctgcaattttagaggaagccaaaaagacagtaatgaatgttctagagcaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaaccacttcaagtggtagcccccat +cacgttaagaaaaatgaccactggaatggagagtccttcactggtcctcttgcagaccaggcttccaaagcc +aacctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggctgcgctgaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggcttctatgggggtcagaccttggcacaatgatcaggtgc +gccagggcttttggcggtctcatggacagcatgaaggcaagttgtatagctcttccttgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggtgtatcctctctgccgctatggaagtgatgg-tgcggttttctg +ctgagccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgacttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgcacatcgcaatggaattcaatagcacactgg +atactcactttgagtgcgatggcagaagtgtcaggcctctcaccagatgttatccaagctcactcttgtttt +tcattttatggggatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttaacacaaaaactt +agggagtatggcctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactgtactggacgagggggcctaaccatgagaacccgtacgagagcatggtccctcattct +cagcgggctacacaactcatggcccttcttggtgaggcctcactgcatggtcctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +agatggatgaggttctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacaatga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccctgtagtcggtcaacagaatataattga +tccctggattagaaacaattttgtacaagcccctgctggtgaatttacagtttcccctagaaactctcctgg +agaactcctacttgatttggaattgggtcctgaacttaacccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgccgccatcccacctagcttcccttatgaaaatttgtcacccgcccaattgactatgtgcccccatgt +gatagtggatgtgaggcaattggaaccagtgctcttgccaatgccagatataagaaatgttttctatcatta +taatcagaacaacagt---cccaaacttaggcttgtggctatgctttacactcctctgagggctaataattc +aggtgatgatgtgttcacggtgtcttgtcgcgttctaacgcgaccttctccagatttccagttcactttcct +ggtcccacctacagttgagtctaaaactaagaacttcacccttcccgttctcagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcagatgcacaactgatggtgagctgcttggtaccactatcttacaatctgtgtctatttgcaattt +caaag-----------------------------------------gaacaatgcaggcgaagc-------- +---------tgaatgaagagcc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaattgcaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacaggt +tgacactgcgggtgacacattcgccccgaagattggccaggttcgatt---ta---------aatcaagctc +caatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgacc---------agcacccttttagacagtggtccctgccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttagccccagctgtgacgccgctcttccctggcg +agcaaatcttgttctttaggtcatacattccaa------gcgccggaggcca------tacag--------- +--acggtgctatggactgtttgctgccccaagagtggatagagcacttctaccaggaggcggctccttccca +atctgacatcgcactggtaaggttcatcaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagaccaccctattgtgatgcccaccaatggttactttaggtt +tgaagcttgggttaatcctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggtttggcaggtgacgttgtggcttccagcttg +ggctcactcgtgggtgctgg---agccaacgccatcaatcagaaagtggagtatgacttcaacaggcaa--- +------------------------------ctccaggaggcatcttttagacatgacaaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgactgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagtcaaagcgcctatgacgcagatccttgattggaatggt +tctagatattgggctcctaactccatgaagacaactggctattcaggtacatttacttctcaaggcatta-g +aa-----------gttcccctcatctgtc-------------ta---------------------------a +tcaaaccc--------------caagtgctgttaaacc---------------------------------- +-------------------------------------tactagacctttaccatctat-----------atc +tagttctt-----------ctagtgtgtatagttctccctctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------ga +cagggtc----c---tccag-------------------acctaacactgtgt---------ccacaaagac +ctccac-------------------att--------------gtcgaggacaagtgattgggtcagaggcca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcaa +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------ttaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------ttccttc------ct-tccccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK629457.1/1-7559 |Norovirus GII isolate Hu/US/2016/GII.P16-GII.4/Auglaize0259, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccattgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggatcaacggagaggcgtt +cccttacactgcctttgacaacaattgctatgctttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatgtcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaacccatctggccag +ggaggtggcaagaaaggtggcatccactcttacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ctaccggctctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtgggaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccgagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cccccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgaaaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacctatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtaaagtc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgaggccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------gggtgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaaa---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcgaggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MK616558.1/1-7466 |Norovirus GII isolate CA-RGDS-1017 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +a------cc----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccactaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggacttccctggtcaaccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattggggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccatcctaggccctggggatgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggtcacccctac +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +agggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaagaacggtgactcgtgatccagctggttggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacatctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcgaatcaatcaga----------- +-----------aagtgaa------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggctccccctgtggcccccacatttcctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggattcaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcaggcaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----cttcttcagc------tagtagctcttc-----------ta--------gt +-------------------gtttcttcccaacccatttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aaatat-c--t---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MK616559.1/1-7430 |Norovirus GII isolate CA-RGDS-1018 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccactaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcttttgacaacaactgctatgccttttgctgctgggtattagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagttcacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggacttccctggtcaaccagatatgtggaaggacgccttcaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattggggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagttgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccatcctaggccctggggatgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggtcacccctac +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaagcacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +agggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcaccttcctccgaagaacggtgactcgtgatccagctggttggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacatctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caatcagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaacgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcgaatcaatcaga----------- +-----------aagtgaa------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggctccccctgtggcccccacatttcctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggattcaacacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaatagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catctttcaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacagctacaggctgatatgattgcaatcaggcaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccacgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctaatt----------------- +-------------ctc-----cttcttcagc------tagtagctcttc-----------ta--------gt +-------------------gtttcttcccaacccatttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------tcaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-g---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK616560.1/1-7439 |Norovirus GII isolate CA-RGDS-1019 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------------------aaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggtt +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgtcga +actcgtacctgtggtgatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcagaatgtt +gtcctcggcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatcagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttgtaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaataccttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaagctggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcgttt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggtcgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaacaacctctagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgt +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggtctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caaccagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaatgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccagcacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggttacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaacagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catcttttaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacaactacaggctgatatgattgcgatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccgcgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctgatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------ttaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aaa--------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK616561.1/1-7466 |Norovirus GII isolate CA-RGDS-1020 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtacacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggtt +tag---caggagaatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggacgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +tagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggggattacgagttgcaagggccagaagacctcgccgtcga +actcgtacctgtggtgatgggtgggattggtttggtgttgggattcaccaaagagaaaattggcagaatgtt +gtcctcggcagcatcaacactcagggcttgcaaagaccttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggacgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatcagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccgcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagatgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaatcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaaaaacggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggacaccatgaaagtcggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacgcctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcgtcatatcttgtaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggaataccttcaagacagagacaggtac---t +atgaagaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaaggaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaagctggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcgttt +ggagtccccatcaaacaagttcaaatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggagactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggtcgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgagcaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaacaacctctagcggtcacccctat +cacgttcgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgt +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattctagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcactaagctgtcacctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccccgaacagttaaccgccaaattg +aaggagtacggtctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaaggcccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgttccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcgatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaattttgtgcaggcccctaatggagagtttacagtctcaccccgcaactcgcctgg +ggaagtcctactcaatttggaattaggtcccgaattgaatccatatttggcacacctttctagaatgtataa +tggttatgcaggtggagttgaggtacaagtgctactggctgggaacgcgttcacggc---tggaaaattggt +atttgctgcagttccccctcattttccattagagaatataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttggaaccagttttattgcctctaccagatgtcagaaataacttcttccatta +caaccagcaaaatgag---ccgaggatgaggcttgttgcaatgctttatacccctcttagatctaatggttc +tggtgatgatgtgttcaccgtctcctgtagggtgctcactcgaccctctcctgattttgattttaattattt +ggtgcccccaacagttgaatctaaaacaaaaccattcacactccctgtcttgaccattggggagttaaccaa +ttccagg---ttccctgtgcccatagatgaactctacactagccccaatgagagtttggtggttcaacccca +gaatgggaggtgcgcgctggatggggagttgcagggcaccacccagctccttcccacggcgatttgctcgtt +caggg-----------------------------------------gtcggatcaatcaga----------- +-----------aagtgag------------------------------------------------tg---- +-------gagaga----------------------------------atcat-------------------- +-------gtttggaacatgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +ccctctgggcacgccagacttttctggcaagctctttggtgtcctaagccaga---gggaccatg------- +----------------------ataatgcctgc--------agg-----------agtcatgatgcagtgat +tgcaactgattctaccaaatttaccccaaaattgggtgctgtacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------agtttactccag- +--------ttggattg---------tttgagaatgaaggt---------tttaatcaatggacacttcctaa +ttattctggagct-ttaaca------ctcaatatggggttggccccccctgtggcccccacattccctggtg +agcaaattctcttcttcaggtcccacattccc------cttaaaggaggtgt------tgcag--------- +--acccagttattgattgtcttctaccccaagagtggatccagcacctttatcaggagtcagccccttcaca +aacagatgtggcactgattagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggttacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttatttcaggtt +tgactcttgggttaatcagttttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcagggcttgccggtgacatagtcaccaacagcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccagaaagtagactttgaaaacaacaagcaacta +caacagg---------------------------------catcttttaaccatgacaaagagatgttgcaa +gctcaaattcaggccaccaaacaactacaggctgatatgattgcgatcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggtgcagtcaacgcgcccatgactcaagtcttggattggaatggg +accagacattgggcccccggagccgcgaaaacaactgctttctccggtgggtttaccagtgcc--------- +tc---------------------tcatgccaggaccgttgacctgaccaagaagacatcagccacacca--- +gccccta----------------tgcctgtttctaggc--------------ccag---------------- +------------------------------ttctattgcttccactgtttct------------------ac +tcgctcta-----------ctttg------------attagtgggtcctctgatt----------------- +-------------ctc-----cttcttcagc------taggagctcttc-----------ta--------gt +-------------------gtttcttcccaacccacttcc------------t------------------c +atcctc---------------------------------------ccgaactagtgagtgggtacgcagtca +aaatagggcgctggagccttatatga---atggggcgctgcgtacagcctacgtgacgcctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggtcgtctgcgt------------ttaatacacacagacagccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaaga----------- +---t-g-gtc-tt---------------------ttctttc----------tt-------------tccttt +g-a---aaaacc-c--t---gtcttct--------------------------------------------- +------------------------------------------------------------------------ +- +>MK616584.1/1-7452 |Norovirus GII isolate CA-RGDS-1021 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggcctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gaggccagtgtacacccctc---agtacctcatatccccagaaactctcaaaaagttacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcattattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcgggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtgccagtagtgatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtagagatctcggagcatatggattggaaattctaaagttggt +catgaagtggttcttcccgaagaaggatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgacaaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagccaggaaactctccaccaaatctgcttctcctgatattgt +gggcactatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggggaccagagggtaggcctcatcccacggaatggtgt +cgatcactgggacgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagacctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggtaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaacaagt +acgggctggtggacaccatgagagtaggaagccagctcaagaatgtcaagaccgtgtcagagcttaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacttgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagatgatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaggaatacctccaagatagagacaagtac---t +atgaggaggttgccatagccagggccactgaagaggacttttgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcggaaa +tcaggaaaaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccactcatgtcatacctcaaggggcacaagagttcttc +ggtgtatccatcaaacagatccaaattcacaagtcaggtgagttctgccgactaagattcccaaagccaatc +agaactgatgtgacaggcatgatcctagaggaaggggcccctgaaggcaccgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtactacacca +ggtgattgtggatgcccatatatctacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacagcaccactcccgcctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaagggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaattattaacgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcctcccttgataaaacaacctctagtggctatccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgt +gctcgagcgttcggagggttgatggatgagctcaaggcccattgtgtcacactccccatcagggtggggatg +aacatgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagcttcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtgacagatctatctcctgacatcatccaagcaaactcacttttc +tctttctatggtgatgatgaaattgtgagcactgatattaaattagatccagaaaggctaacagccaaacta +aaagagtatggcctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaaccatgaagacccctctgagacaatgataccacattct +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagttttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcacttccctcttgagaatctaagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttcttttgcctttaccagatgttaggaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcacaacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcctggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttaggatctgtggttttgggca---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------tcggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +gcaggggttcattacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgtgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--cagacctagttctt--ctgcttctactgtttctacccgctcaacaattattag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtggtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------tcttcc--------ac---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK616585.1/1-7456 |Norovirus GII isolate CA-RGDS-1022 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------tccgctgccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctatagtg----------ccaa---agatggtgtctccggcctgcctgagctatccaccgtcaggcagcc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +acttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gaggccagtgtacacccctc---agtacctcatatccccagaaactctcaaaaagttacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcattgtcatcattattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatactcaatatactagcttcctgcgactg +gactttcgcgggaatagtagaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtgccagtagtgatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagatctcggagcatatggattggaaattctaaagttggt +catgaagtggttcttcccgaagaaggatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagaccttgaagcaattgagaacaatcacatgacaaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagccaggaaactctccaccaaatctgcttctcctgatattgt +gggcactatcaattcacttctggcacggattgcagctgcccgttccctggtacatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggggaccagagggtaggcctcatcccacggaatggtgt +cgatcactgggacgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagacctgacttctcacacataaaattga +tgttggctcctcagggtggttttgataagaatggtaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagcttgccgctgaaaacaagt +acgggctggtggacaccatgagagtaggaagccagctcaagaatgtcaagaccgtgtcagagcttaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacttgaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagatgatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaggaatacctccaagatagagacaagtac---t +atgaggaggttgccatagccagggccactgaagaggacttttgtgaggaagaagaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggactggtcacaggctcggaaa +tcaggaaaaggaacccggatgacttcaaacctaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaaactcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccactcatgtcatacctcaaggggcacaagagttcttc +ggtgtatccatcaaacagatccaaattcacaagtcaggtgagttctgccgactaagattcccaaagccaatc +agaactgatgtgacaggcatgatcctagaggaaggggcccctgaaggcaccgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtactacacca +ggtgattgtggatgcccatatatctacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggaagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaactaaa +ttctggaggtcctcaacagcaccactcccgcctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaagggtggtccctcattacaacaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaagcctagtgtattggaagcagccaaaaagacaattattaacgtccttgagcaaactatagat +ccaccccagaaatggacgttcgcacaggcgtgcgcctcccttgataaaacaacctctagtggctatccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctatacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgattcgttgt +gctcgagcgttcggagggttgatggatgagctcaaggcccattgtgtcacactccccatcagggtggggatg +aacatgaatgaagatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagctgttttagcttcagccctagagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtgacagatctatctcctgacatcatccaagcaaactcacttttc +tctttctatggtgatgatgaaattgtgagcactgatattaaattagatccagaaaggctaacagccaaacta +aaagagtatggcctcaagccaacccgcccggacaagactgaagggcctttggtcatttctgaggacttagat +ggtctgacctttttgcggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaaccatgaagacccctctgagacaatgataccacattct +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcctctatagctgcccctttgaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagttttgttgaatttggaattaggccctgaactaaatccattcttggcacatctttcaagaatgtataa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gttcgcggcaatccccccgcacttccctcttgagaatctaagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgttcttttgcctttaccagatgttaggaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgacgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacacttgatggtgaactgcttggcacaacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccctgc +accattgggcatgccagacttcctggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacctaagttaggatctgtggttttgggca---------cttgggaaga +acaagatct---tgatctcaaccaacctacca---------------------------gattcacacctg- +--------tcggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctattctggaaga-ttaacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +gcaggggttcattacagtagcaaattctggttctagacctattgttgtcccccctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgacatagtcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagactttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcggttaatgtgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccaccaaaacaactgctttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acacctatatc--cagacctagttctt--ctgcttctactgtttctacccgctcaacaattattag +cgggactt--------------------------------ctggcctttcttctttga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtggtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcgtct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK590972.1/1-7367 |Norovirus GII isolate V17T03029_Noro_GII_P16_GII_2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------------gagacaaaccacaa +atg---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgccttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcttatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttggccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccagatcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcgtccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggccgcagaaaataagt +atggattggtagacaccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtactggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccggaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgatccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgagtttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttctgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +taaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gggacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---gtggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatg------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK590973.1/1-7471 |Norovirus GII isolate V17T03094_Noro_GII_P16_GII_2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------------------------------acaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcatagggaaaataaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgtcatgatatctggaaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcagacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtaaagaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatgc +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtgacaggttcagaaa +tccgaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtagtccccgcgggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagaaggtgcacctgagggcaccgtggcatctgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaagtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgagttctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcaacagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattgcaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttagctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccacta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatccttacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaacaa +tcct--------gggtataatgaaccagcaaac--------agg-----------ggacacgacgctgtagt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------cgtggcaaac +tgatgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacactagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctggccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggtcagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gat---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gat------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK590974.1/1-7496 |Norovirus GII isolate V17T03764_Noro_GII_P16_GII_2 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaataattgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagatctcataggaaaaataaaaccattaaacatattgaatatcttggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacgta +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcgtcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagtt +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgaaagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaacctcgccaatccggccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaaaccagacttttcacacatcaagctac +agcttgcaccccagggcggctttgataagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatgggagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacacgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gatg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacagatac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggagacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tccgaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattttggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggctcctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactagaccaaagctca +attctgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaactttgtccaggcccctaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccattgtccatagaccagatgtacaccagccctaacgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaacag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------cgtggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctattcttcagatcatacattccc------ctcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccaaca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ttggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agtacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agattag--t-----------gaaaaggt---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK483908.2/1-7539 |Norovirus GII isolate Hu/GII.P16-GII.1/RUS/Novosibirsk/NS18-A1400/2018, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggtgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaatacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gctgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +cag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacatgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataatcacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaacaa +aggaaaagtttttgacagtgaagtcataataatcacaacaaatcttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacttcaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagagaacaagt +acggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gtaagggcaaagttttggtagaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagcctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggatttgggaactactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaatacaccccttccaccagggacatatgagcctgcctacctcggcggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacccccaagaccaagtgtattggaagcagccaaacaaaccgtcatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgtacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacatccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaagggaaacacatgacaccagtatatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataagtaccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttagaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagttgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaaggactcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtccgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgaggggcccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaaccatgaagaccccaatgagacaatgataccccattct +caaagacccatacagcttatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgaaccggtggctggggcttccatagctgcccccctgaccggtcaaaacaatgtgataga +cccctggattagaatgaactttgtccaagccccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtattgctaaatttggaattaggtcctgaattgaatccattcttggcgcacctttcaagaatgtacaa +tggttatgcagggggggttgaagtgcaggtgctgctcgctgggaacgcgtttacagc---ggggaaactggt +atttgcagcaatccctccacattttccccttgaaaatttgagccctggacaaattactatgtttcctcatgt +gattattgatgttaggacgttagaacctgtcctcttacctctcccagatgttagaaataacttcttccatta +caatcagcaacccgaa---ccccgaatgaggcttgttgctatgttgtatacccctcttagatctaatggttc +tggtgatgatgtgtttacagtttcttgcagggttctcacccgcccttctcctgactttgattttaactattt +ggttcccccaacagtggagtccaaaacaaaaccattcaccctaccaattttgactattggggaattgtcaaa +ttctagg---ttcccagctccaatagatgaactgtataccagccccaatgaaggagtggtggtgcaaccaca +aaatggtagatcaacactcgatggtgaactactgggcaccacacaacttgtgccttcaaacatttgtgcgat +gcgag-----------------------------------------gacgcatcaatgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgatc----------------------------------accat-------------------- +-------caatggaacttgcaggtcacaaatacaaatgggacccccttcgaccccaccgaagatgtccctgc +accattgggcacgccggacttcctggcaaacatctatggagtcaccagtcaga---gaaacccag------- +----------------------acaatacttgt--------cgt-----------gcccacgacggggtttt +ggcaacttggagccctaagttcacacccaaattgggatccgttgtcctaggta---------cctgggaaga +tagagactt---tgatcttaaccaacccacaa---------------------------ggttcacacctg- +--------ttggattg---------tatgatacagaacat---------tttgaccagtgggtcctgcctaa +ttactctggaaga-ttgacc------ttgaacatgaatttggcaccctctgtatctcccctctttccaggtg +aacaaatactcttctttaggtcccatatacca------cttaagggaggcac------ttcta--------- +--atggtgccattgactgcctgctaccccaggaatggattcagcatttctaccaggaatcagccccgtcacc +cacggatgtggctctaattaggtataccaaccctgacacaggtcgagtcttgtttgaggccaaattgcacag +acaggggttcattacagtggcaaattctggttctaggcctattgttgttcctcctaatggttattttagatt +tgattcttgggttaatcaattttattctcttgcccccatgggaactggtaacgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttatagcaggtcttgctggtgacatagtcaccaatggcatt +gggacactggtaaatgctgg---ggcaaatgcaataaatcaaaaggtagattttgaaaataacaagcaatta +caacaag---------------------------------cctctttcaatcatgataaggaaatgttgcaa +gcccagattttggcaacaaaacagttacaggctgatatgattgctctcagacaaggggtgttgaccgcgggc +ggcttctctcctactgatgcagcaaggggggcggttggtgcacctatgacgcaagtcttggactggaatggg +actaggcattgggcccctggagccataaaaacaacatctttctccggtgggttcactagctct--------- +tc---------------------ccatgctagaactcttgatttgccaaagaaaacaacaactgcacca--- +accccga----------------tgcctgtatctagac--------------ccag---------------- +------------------------------ttcttctgcttctacagtttct------------------ac +ccgctcaa-----------cagtc------------attagtgggtcctctaatc----------------- +-------------ccc-----cttcctcgat------taggagctcctc-----------ta--------gt +-------------------gtttcttcccaatctactccc------------t------------------c +ttcttc---------------------------------------ccgggttagtgagtgggtgcaaaatca +gaatagggcactggagccgtatatga---ggggggcgctacaaacagcttacgtgacgcccccctccagtag +ggcttcc---agta------------------------------gtggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacagccgctcttcgctc +atctccgtcggagaggggagtcaca--------ggcttag--t-----------gaaaagg----------- +---t-a-att-tt---------------------cttcttt----------tc-------------ttcctt +g-g---aaaatt-t--t---atcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MK483909.2/1-7584 |Norovirus GII isolate Hu/GII.P16-GII.4/RUS/Novosibirsk/NS18-A1494/2018, complete genome +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggtccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatactagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gctgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctaacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcactgtccacattgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtggttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtagcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggccagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcaaggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcgggcctactacatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atgggttggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctctacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaaat---agatcaaaatga--------atcagaagctaaggaagaggtccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaagcaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaatcctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgaactttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaagaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcgaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcatcggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gataaaggaacatactgtggggcacccattttgggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaatcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaggggctcccatctggtgtgccatgtacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcactaaattgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctacgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggttataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgactaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacaactgatggcgtgctcctaggcaccacccaactctctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactggaagtgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatttggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttataccccccaacggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctgcaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctccagatgctaggattacaacatacaatacaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccagaaa----------------gagctaatcttaggg--------------gtgc---------------- +------------------------------tgtccctgctcgaggaccctcc------------------aa +caaaccct-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttcttttt-----c-tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MF421538.1/1-7530 |Norovirus Hu/GII.17/WH2017-36/CHN/2017 nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagacatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgataaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgttttcaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccagcttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccacaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgataccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcataccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaagaggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aa----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF421539.1/1-7530 |Norovirus Hu/GII.17/WH2017-153/CHN/2017 nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcacttttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaggaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtgcctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagacatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +tgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacccggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttccaccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggatctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +attcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggcccactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---gagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aa----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF421540.1/1-7530 |Norovirus Hu/GII.17/WH2017-156/CHN/2017 nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcacttttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaggaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtgcctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagacatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacccggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttccaccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggatctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +attcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatagtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggcccactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---gagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aa----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF421541.1/1-7530 |Norovirus Hu/GII.17/WH2017-162/CHN/2017 nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcacttttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaggaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtgcctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagacatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacccggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttccaccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggatctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccatgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +attcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggcccactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---gagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aa----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF421542.1/1-7530 |Norovirus Hu/GII.17/WH2017-170/CHN/2017 nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaacgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcacttttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaggaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtgcctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagacatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacattgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacccggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttccaccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggatctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +attcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +agcaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggcccactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---gagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aa----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK301293.1/1-7534 |Norovirus GII isolate Hu/GII.P7-GII.6/Maryland/USA/2018 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------at---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttctgacaaagaagaggt------tggtgcactctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtgg----------------tcagcactgccccacggtcaagatcggggccaaaacattaacggtccc +ccc-----------------------------tgagcccccaaatgg------tgaagat------accgtg +cagtttgacg----------cgaagtcggaaactgtgcgtgggttgccagacttgacaacggt---gcagaa +cgaacacgaaaacacaccatacactgttcccccattgagtgaaagagagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggacggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cttgggggttcataagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaagggccttgctggtgaaaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +cag---caggaggtgcatctccaggaccaccggcttcttcaagccgtatcagtcttggaataggaaacccct +tcctaccgttgatgatggaaagatcaaaaaggtagccaacgcaattctttgcgcacttggatcactgttttc +aaaaccaattaaggacttattgggcaaacttaaaccattgaacttgctgcacctgctcgcatcatgtgactg +gacgtttgcgggtgtagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatagcctccctgataggtgactttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacattttaaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatcttacaacccttctcaaggacaaggatagcctcgcagcttt +tatgaagactctggacctagaagaggagaaggcaaggaagctgtccactaagtcatcctcgccagacatcgt +cggcactatcaatgccatactggccagaatagctgctgccaggtccctcctacacaaggccaaagaagaaat +gttcagtaggatcagacccgtggttgttatgatctcgggtagacctggcatcggcaagacccacatggcaag +gcacttggccaagactatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaatggagt +cgatcactgggacgcttacaggggagaaagggtggtcttatgggatgattacggcatgggaaaccctgtcaa +agatgccctaacattgcaagagctggctgacacctgcccagtaactctaaactgtgacaggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacttggttaacccggcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagagttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agaaagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgataagaacggcaatactccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggccttgttcatgagaggagagacgagttccaactccaaggga +acgaccttcaaacatacaactttgataccaacagggtctctgcgtttaggaagctagccgcagacaacaagt +atgggatcatggagacaatgagagtgggcgcggcgttgaagagcgtcaagaccttggaagatctgaaaattg +ccctgagggatgtgaagttcaatgagtgtgagataatctacagaaactccagataccgagtctcttccaatg +gcaaaggttctgtctctgtcgacaaagttgaggaccagacatcccagactgcaaacgaagtgggtgcagcaa +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagacctcgtctacactctaatgc +aggtcgccggagcatcattcgttgtca---------------gtagga------tctctaagaggttctgct +gggagaaatgggtcaaaccaaccgagac-------------ccaggaaacgattgaatccga-----aaagg +aagtagcccaaggca---aatgggagattgaacccaaggatacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagccttctctagcaaaggccttagtgatgaggagtatgatgagttca +agaggatcagggaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacaaaggaaggaagaaaggggagtgcttggcctggtcactggctcagaca +tcaggaagaggagaccagacgatttccaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctacctaaggggctcaaggaacttttt +ggagttgaaatcaaacagatccaaattcacaaatctggagagttctgcaggttcagattcccgagaccgatc +agacaagatgtcacagggctcgtgttggaggaaggtgccccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgaaatgatccccctagcagtgaggatgggcacacatgcaaccatgagaatacagggtagg +accgttggtggccagatgggaatgctccttacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggcccaggcaaggctcccaagcttagcacgaagaccaaa +ttctggcgttcatcaccagacgttctgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcaacaagtcatgagggaccagttgaaacctttcacagaacccagaggc +aagccacctaggcctgcagttttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaattagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatggggatcggatcttggtacaatgatcaggtgt +gccagggcctttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtaggaatg +aacatgaatgaagacggccccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaactcagcaaaggagtgttcttgcagccgctatggaagtgatgg-tgcggttctctg +ccgagccagatct-ggcacaagtggttgcggaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccgtcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcttgaccttgagcgcaatggcagaagtgtcgggtctctcaccagatgtcgtgcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacccagaaactc +agagagtatggtttggttcccactcgacctgacaagactgagggttcccttgtgataactgaagatctcacc +ggcctgacgttcctgcgtaggtcaattgcacgggacccagccgggtggtttggcaaattggaccaagactca +atcctcagacaattgtactggacaaggggccccaatcatgagaatccatatgagagcatggtcccccattcc +cagcgggccacacagctcatggctcttctcggtgaggcttcactgcatggcccccagttttacaagaaggtc +agcaagatggtcatcaacgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcacctgg +agagatgctgttaaatcttgaattgggcccagaacttaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaacgcgttcacagc---tggaaaaatcat +ctttgccgccgtgccaccacactttcccgtagaaaacatcagtgcagcccaaataactatgtgcccccatgt +gattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacattaggaacaggttctttcatta +caaccaggagaacact---ccccggatgagacttgtggccatgctctacacccccctgagggc---caactc +tggtgaagatgtgttcaccgtctcttgtcgggttctgacccgtcctgcccctgattttgaattcactttctt +ggtaccaccaactgttgaatcaaagactaaaccttttacactgcccatactaactcttggtgaactgtctaa +ttccagg---ttcccagccccaatagacatgttgtacactgacccgaatgagggaatcgtggtccaaccaca +aaatggcaggtgcactcttgatggcaccctgcaaggcaccacacagctggtccccacccaaatttgtgcttt +taggg-----------------------------------------gcacactaattagccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agcccttggtgccattgacttcaaggggactgtctttggtgtggccagtcaga---gagacgtgtcagggca +-----ac---aagtggga---------gcgact--------cga-----------gcccatgaagtgcatgt +caacacaactgatcctaggtatgcaccaaaactgggaaccatcctcat---gc---------actcagagtc +ggacgactt---tgtgactgggcagccgatct---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggaactgcctga +ctactctggacat-ctaacc------ctgaacatgaacctcgccccagcagtcgctcctgcttttccgggtg +agaggattcttttcttcagatcagtagtcccgt------ctgccggcggcta------tgggt--------- +--ctggacaaatagactgcctcataccacaggagtgggttcagcacttctatcaggaggctgcaccatccca +atctgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggagggcttcatcaccgtggcaaattctggtaacaatcctattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgccataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcaatcaatcagaaagttgaatatgattttaacaaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcagatgctgctagaggggccgttaatgccccaatgacaaagattctggactggagtggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ta-----------agtctcctgctccttcccagcatgctgttcc---------------------------g +tcaa-------------------agagtaggttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ttagtgtatatagctccccttcctctgtttcttcac----------------- +---------------------aatcaaccca---atcaacagtgctgtcat-------cagg--------aa +ctaggtc----t---tccag-------------------gtccatctccacat---------ctacagcgac +ccccac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcctct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctacgcaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------att-agat--------------------tttctct------cc-ctacttct---t---ttctct +c----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MK282256.1/1-7601 |Norovirus GII isolate CMC-01, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagattgatccaaagaccatctggattcttcagactgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaagcagg +ccataaagaacatcagtttcaagaagtgccagatagtgtataacggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcaccggatcggaga +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaagaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaggggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaactaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcatacctcggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaatccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccggtttacaccgcagcactcaaagacgagctcgtgaaa +gctgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgt +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgctctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttatcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtaaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggtatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacaatgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttataccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgatgaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggggccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcgcatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtggaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ccggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aataaaaaaaaaaaaaaaaagttcc +a---------aagccataacctcattg--------------------------------------------- +- +>MK282257.1/1-7600 |Norovirus GII isolate CMC-02, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtgtatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagaccatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtaaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaggtcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcaa----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaagcggtgat +ttcaacccatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +tgatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatgatg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttactccaaacttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagaagtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatattttagatt +tgattcttgggtaaatcaattttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatccgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcctcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------a-taaaaaaaaaaaaaaaaagttcc +a---------aagccataacctcattg--------------------------------------------- +- +>MK282258.1/1-7599 |Norovirus GII isolate CMC-03, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaataaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcgtaccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctgtacgtcagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +ggtccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---acagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttccttccagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctaga------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------a--aaaaaaaaaaaaaaaaagttcc +a---------aagccataacctcattg--------------------------------------------- +- +>MK340748.1/1-7473 |Norovirus GII nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaaccatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccattatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaagtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctacaaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccatcctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccgtgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccggtcactggtcagacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaagttg +cagcaaa---------------------------------attcttttaatcatgataaagagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttagaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccatccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtca------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK213549.1/1-7475 |UNVERIFIED: Norovirus GII isolate Hu/Guangzhou/GZ2017-L601/CHN/2017 nonstructural polyprotein-like (ORF1) gene, complete sequence; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgccgctggcaacttt---aacattgccaac +a------ac----agtgaaaacactccccctcccgttaaggaagaggc------gagtgtcctatccaacgt +aaaagttggattcaagaaaa----tattgggggctgtgcctaagcagccc-------------aagccacc- +agaagtgaaaa------------ccaaagatcaacccagggtgctggtcaatggtaaggccctggaggtgcc +gcc-----------------------------cccaccaccaaatgg------tgaagac------gtggtt +tactataaca----------gcaaggatgacactgtgcacggcctaccaaatctaacaacagt---cagctg +tgaaggcgaaaaccttccgtacacagttcctcctctcagcgagagagagcacagggcagcaccagaaccatt +acctggcaccatactagagatgtgggatggtgaattctaccattatgcgatatatgtctctggtggtaaggc +cataggggtgcacaaacccccagctgcaatcagccttgccaccatcgagcttacacctatatcgctttactg +gaggcctgtttatgtcccca---attacttggtccaccctgacacactcaagagcttagctggtgaaaaatt +tccatacaccgcatttagcaataattgttacaatttctgttgctgggttcttgacttgaaagactcgtggct +taa---ccgcagatcaataactagaacaaccggtttcttcaagccttatcaaccctggaacaagaaaccact +tccgacggtggatgatggaaaaatcaagaaagtcgccaatgcagtcctgtgtgcccttggttcactattctc +aaaacctattaaggacttgatcgggaagctgaaaccactgaatttcttgaatctcctcgcttcgtgcgactg +gaccttctccggagtggttgagaccgtcatactagctgctgaactattc---ggtgtgttttggaccccccc +cgacgtgtcgaacttcatcgcgtcactcatcggggacttcgagttgcagggtccagaggatttagctgtgga +gttggtgccgattatcatgggcggcatcgggatggtgctgggattcaccgccgagaagatcggccgaatgct +atcatcagctgcatcgacccttagggcctgtaaagacctaggtaactacgcccttgacatacttaaattggt +catgaagtggttcttcccaaagaaggaggagaaggcagagatggagaccttgagggccatagaggatgctgt +cttagacatggaagcgattggaaataatcacctcactgctctgctgaaagacagggacagcctcctaaccta +catgaagactctagacctcgaagaggaaaaggcaagaaagttatccacaaaatcatcttcccctgacatcgt +gggtaccatcaatgccatactagccagaattgccgcggctaggtctctcctacacagagccaaagaagaaat +gtacagcagacctaggcctgtcgtggtgatgatatcaggaagaccaggggttggtaaaacccatatggctag +acacctcgccaagagtgtggcgggcaccatgagcggtgaccaaagggtgggcctcatcccccgtaatggagt +tgatcactgggatgcctacaggggggaacgagttgtcttgtgggacgactatggcatgggtaacccagtgaa +ggacgcccttgctctgcaagaactagcagacacttgtccagtcaccctcaattgtgacaggatagagaataa +gggaaagatgttcgatagcgaggtaataattataacaaccaatctggccaaccccgccccgcttgattatgt +caactttgaggcatg-ttcccgcagaattgacttcctcgtctacgcagaggccccgaccattgagaaggcga +agaaggatttccccgggcaaccagacatgtggaaggagcacttcaaagcagacttctctcatctcaaactca +cactggctccgcaaggcggttttgacaagaacggcaacacgccacatgggaaggggactatgaagaccttaa +cacagggttccctcacagcaagagtggctgggcttgtgcacgaaaggaaagacgagttccagttacagggtg +gggagttgcaggtctacaactttgacacaaacaaggtatcggctttcaggaagcttgctgcagacaacaact +atggatttctggagacaatgagagtcggctcctcactcaaggacgtcaagacagtggaagatcttaaatgtg +ccctcaggagtgtcagtttcaaagaatgtgagataatctacaggaatgtcaagtaccgcatatcatcagacg +gttgcggtaaggtcagcatagagaaactggcagataacaactcccaaacaaccagagagattatcacggccg +tcactagactacaacaggctcgtgctaggtactacatcagctgtttccaagacctagtctacacactcttgc +aggttgccggagcctcatttgtcatta---------------atagaa------tagttaagaagttcaact +gggaacgatgggtcaaggctccggaaacagatgaacccacaccaagtaatga-caagcccgac--------- +-----actgaagagg---aatgggagatcgcccccaaagatgtggactctgagggtaaaaaggggaagaaca +agaagggcaggggacgtaagcacactgcattctccagcaaagggcttagtgatgaggagtatgatgaattca +aaagactgagggaagagaaacagggccgctacacaatagaggagtacctccaggacagagaccggtac---t +atgaagagctggcagtggcccgggccactgaagagaacttctgtgaagaggaagagataaagatcaggcaaa +gaatattccgccccaccaaaaagcagaggaaggaggagcggggggttctgggactcgtcacaggagcagaca +tcaggaaacggagacccgatgatttccaaccaaaaggaaaactgtgggcagatgattctaggagcgtcgact +acaatgagaagatcgagtttgaagctcctcctagcgtctggtcaagaatcgtcccgcttgggactggttggg +gattctgggtctcat-ccaacttactaatcaccaccacacatgtgctgcccaaaggcatcaaagagcttttt +ggggtggacatcaaacaagtccaagttcacaaatcaggtgaattttgcagattcaggttcccaaaaccagtg +aggccagatgtctctgggttggtactagaagaaggggcccccgaaggcacagtgtgctctgttctcatcaag +aggtcaacaggagagatgatcccccttgcagttaggatgggtacccacgcctctatgaagatccaggggcgc +actgttggcggccagatgggcatgctgctcactggagccaacgctaagaacatggatttgggtaccggcccc +ggggattgtggttgcccgtacatatacaagaggggcaatgacatcgtggtggccggcgtccacacagcagca +gcgcgtgggggcaacacggtcatctgtgcaacccaaggacctgatggtgaggcagtgttggaagggggagag +gaccacggtacttactgtggagccccaatattagcccctggtaaagcgccgaagcttagcacaaagactaag +ttttggcgctcatcccctgattcccttccccctgggacgtatgaaccagcttaccttgggggtaaggatccc +cgtgtggagaaagggccatcactccaacaagtgatgcgagaccaactcaaacccttcacagaacccaggggc +aagccaccgaggccgtcagtgctggaggaagccaagaagacagtcatgaatgtactggagcagaccatagaa +ccagctaagccatggacctactctcaagcctgtgcttcattggataaaacaacatccagtggcagtcctcac +cacgtcaggaagaatgaacactggaacggggagtctttcactgggcctcttgcagatcaagcctcaaaagcc +aacctgatgtatgaggagggtaaacacatggaccctatgtacacagcagccctcaaggacgagctggtgaaa +actgacaaaatctataagaaaatcaagaagaggttgttgtgggggtctgatctggggacaatggtgaggtgt +gctcgagcgtttggaggattgctcgacagcatgaaagagagctgcatctccttaccctgtagggttggcatg +aacataaatgaagatggaccactcatatttgaaaaacattccaaatacacctatcactatgatgctgattac +t-ctaggtgggactcaacacagcagagggctgtcctgagtgcagccatggaggtaatgg-tgaaattctctg +ctgagccggaact-ggctcaggtggttgccgaagacctccttgcacccagccgtcttgacgtgggtgacttc +gtcatctccgttcaagagggtcttccatcgggtgtcccctgcacgtcacagtggaactcaatcgctcactgg +atcctgactcttagtgctatgtctgaggtctctggtctttcccctgaggttgtgcaagccaactcctgtttc +tcattctatggggatgatgagatagtcagcacagatataaacctagacccagaaaaactcaccaggaaactg +agggagtatggcctcgtcccaacaaggccagacaaaactgagggcccacttgtgatcactcaggatttgaat +ggtctcacattcttgaggcgaaccatagtgcgggaccccgcaggttggtttggaaaattggaccgtgattcc +attctaaggcagttatactggaccagaggacccaatcatgagaacccctttgaaagcatgatcccccactcc +cagagagcaacccagttaatggcccttcttggggaagcctcgttgcatggtccccagttttacaagaaggtg +agtaaaatggtcatcaatgagatcaagagtggtggtctggagttttacgtgcccagacaggaggccatgttt +agatggatgagattttcagacctcagcacgtgggagggcgatcgcaatctggctcccgagaatgtgaatgaa +gatggcgtcgaatgacgcagctccatcgaa---tgatggcgcggctggcctcgtaccagagatcaaccatga +ggtcatggccatagagcctgttgcaggggcctctttagcagcccctgtcgtaggacaacttaatataattga +tccctggattagaaataattttgtacaagcccctgctggagaattcactgtttcgcctagaaatgctccagg +tgaatttttgttagatctagagttaggtccagaactgaatccttatcttgctcaccttgcacgcatgtataa +tgggcatgcaggtggtatggaggtgcagatagtgcttgctgggaatgcgttcacagc---gggcaaaatact +gtttgcagtcataccacctggattcccctatgaaaatttgtcacctgcacaattgaccatgtgcccgcatgt +agtggtggatgtgagacagcttgaaccaatcctgctgcccatgccagacatccgtaatacattcttccatta +caatcagagcaatgga---ccaaaactcagattagtagccatgctttacacacccctaagggctaacaatgc +tggtgatgatgtcttcacagtctcctgcagggttttgactcgtccgtcaccagattttgaattcaattttct +tgtccccccatctgttgaatctaagactaaagctttcactcttccaattcttaagatatctgagatgacaaa +ttcaaga---tttcccataccagttgaccagatgtatactagtaggaatgaaaatatagttgttcaaccaca +gaatggcagggtgacacttgatggagagttacagggcacaaccacacttcaaccggtgtccatttgtggctt +ccgag-----------------------------------------ggacgctgcagaccagg--------- +-----------------------ctg--gc----------------------------agatcaaccaa--- +--attacaca-------------------------------------------------------------- +----------taccaagtgcaccttgagaatttggacggctcacccgtcgatccgacagatgaagtcccagc +ccccctggggacgccagattttcaggcccagctatttggagttgtcagtcaaa---ggagtagtga------ +-----------------------taatgccacc--------agg-----------gcacatgaggctagggt +caacaccaacgatcctaccttcgcgccccagatcgcccaggtgcgttt---ca---------aatcaccatc +ccacgactt---ctttgacaatgaacccatca---------------------------agttcacaccag- +--------ttggaattagtgttg---atagcg---------aaaacagctacaaccaatggctccttcccag +gtatggcgggcac-ttgaca------aacaacacccacctggccccctctgtgtccccaatgttccccggcg +agcagattctcttcttccgctcgttcatgccag------gtgccagtggtca------tactg--------- +--atggtgctattgactgcctcttaccacaagagtgggttgcccacttctatcaggaggccgcaactgcgca +aacagatgtggctctgattagatttgtgaaccccgacacaggcagagtgctatttgaagggaagctacacaa +gcggggctttataaccatctccaacagtggggaccaccccattgttatgcctgctaatggatacttcaggtt +tgaggcatgggtcaaccaattttactctctcgcccccgtgggaactggaagtgggcgcaga---------ag +ggttc---------aataatggctggagctttctttgcgggtctggctggtgatgtggtgacctctggcatc +gggtcgctcatcaatgcagg---tgctaatgcagtgaaccaaaaggttgaatatgacttcaataggcaa--- +------------------------------cttcaagaagcttcttttaaacatgacaaggagatgttgaat +gctcaaattaatgccacaaccaaattgcagagggacatgattgccatcaagcagggggttttgaccgctggc +ggcttttcccccactgatgctgcaagaggttccatcaatgctccaaccaccaaaattcttgactggaatgga +tctaggtactgggcgccaggatcaatgagaacaacagcatactctggcaatttcatatcacagggagttaag +ca-----------acctacacccattgtta--gatctgtgaaac---------------------------c +tcaagt-----------------acagcaatct--------------------------------------- +----------------------------------------------------------------------cc +tgcccctt-----------cttctgttta---ttctgtaggttctgttaagtcac----------------- +---------------------aatcaacaca---atcaactcaattaacag----ggtcagg--------ga +ctgtatc--------------------------------aagggcacccaccc---------cctcaacaac +cacaac-------------------act--------------gtccagaacaagtgagtgggtgaggagcca +gaatgataggctgagcccctttatgg---gaggcgcactccagacagctttcatcacgcccccatcgagtaa +ggcttcatcctcat------------------------------caggaa---cagtctcaaccgttcctag +agaaattttgga-ctcctggactcctgcat------------ttaacacacgcaggcagccgctcttcgccc +acatgcgtaggcgaggggagtcacg--------ggcttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702256.1/1-6934 |Norovirus GII strain Hu/KH/2015/GII.Pe-GII.4_Sydney_2012/ETR-NV-049 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------atctatcattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgattcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgtactttgtcttcactattcac +caggcccgttaaggacataatagggaagttgaaacctcttaacattcttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctacttaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatatagt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaggattgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccactaatctggccaacccggcaccactggactatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcgcacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccttcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaacattgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgcctctgtgcagaccaacaatgaactagccggtgccc +tataccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacagaatctttggt +ccaagccacaggtggaagacacagagga--------gatggccaacaaagacggttgcctgaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcttccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagyacgatgagtaca +agagaatcagagatgaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcctggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgaggttcccaaagccgatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcttgacgggatccaacgccaagagtatggacctaggcacaacgcca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggaggtgat +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccaactgaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctctaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaggaagaggcttctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgagctcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactt +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactct +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttatgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcakgtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cctaccattaaactgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtttcttgcagagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtagggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccacgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatttggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccycagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtaaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaagcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactrc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggg---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702258.1/1-7238 |Norovirus GII strain Hu/NP/2013/GII.Pe-GII.4_Sydney_2012/ETR-NV-080 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------gagctcaccactgtyagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatacttttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccctctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgccgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtytgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcycttgtcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcarcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacagcaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactayttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaa------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702259.1/1-7124 |Norovirus GII strain Hu/BT/2014/GII.P16-GII.3/ETR-NV-098 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------------------aacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +attgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcagggct +tga---caggaggatggtgcaaaggacaacgggcttcttcagaccctaccaagagtggaacagaaaacccct +gcctactatggacgactccaaagtcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctttgatactactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatctcggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctagctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctacgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagacttccctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aacttgctcctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtaatgaagaccctca +ccaccggttcccttattgcccgtgcgtcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcggaaaacaagt +atgggttggtagacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgtcggatcatctacggtggttccacatatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggagccc +tgcatcatctcaaacatacccgaatcaggtactatgtcagatgtgtgcaagaagcagtctactctatcatac +aaattgccggtgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccgccatt---agaccaaaacga--------gtcagaggctaaagaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggtaaaaaca +aaactggccgtggtaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaagaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaaacagaggaaagaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacctaaagggaaactgtgggccgatgacaacagaagcgttgact +acaatgagaaattagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccataaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtaataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggacttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaagaggcaatgactacatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaattcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgagcccaggggt +aagcctccaaggccaagtgtgttagaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttracaaaaccacctctagcgggcatccccac +cacgtccgaaagaatgaattctggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gctaggtcctttggtgggcttatggatgagatgaaggcgcactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattggcagcagccttagaaatcatgg-tcaggttttctg +cagagccacaatt-ggcacaaacagtcgctgaggatctgttggcccccagtgtggtagatrtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcagtggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaggtcaccaaactgtcccctgacattgtgcaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaactggaccctgaaaagctaaccaccaaactg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgcgacccagctggctggtttggaaaattggaccaaagttca +atactgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcatggaccttctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatatrataga +tccctggattatgaacaactttgtgcaagcacctggtggtgaattcacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggctcatcttgctaggatgtacaa +tggttatgcgggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---ggggaaagtgat +ctttgcagctataccccccaacttcccaaccgacaacttgagtgcagcacaaattacaatgtgtccccatgt +aattgtggatgtcaggcagctggagccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttccgat---tcgaggttacgcttaattgcaatgttgtacacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagccctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaactttttaccctccctattttgactatctctgagatgtctaa +ttctagg---tttccagtgccaattgattctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaacgggcgcgtcacccttgacggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgatcaagctgacgcagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacagctagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctcttgggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tagtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---tattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcact------cacaacatgaatctggccccagctgtcgctcccaattttcctggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggtgggcg------gtcca--------- +--atggtatcctagattgcctggtcccccaggaatgggtccagcatttctatcaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgacactggtagggtgttatttgaggctaagctgcataa +gctgggctacatgaccatagctaagagtggtgattctccaataactgtgcccccaaatggatattttaggtt +cgaatcttgggtgaatcccttttacacactagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaacaataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccatgacaaaagttctggactggagtggg +accaggtactgggcaccaaatgccacctccacaacttcaatgwcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------acaccaaattttaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------atcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ccggatctctcaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tggaca---cagtctcaaccgtgcccaa +gagtgttttgga-ctcctggatatctgcg------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702261.1/1-6753 |Norovirus GII strain Hu/NP/2014/GII.P2-GII.2/ETR-NV-102 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------atcagcttagccaaagtggaattaacacccctctcgctgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgactcatggtt +aag---cagaaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgattcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaaacttaaacccctcaacatcctaaatattctggcctcatgcgactg +gacctttgctggtatagtagaatcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcttctgcagcgtcaactctgagagcgtgcaaagatcttggagcctatgggttggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggattgctgccgcgcgttccctggttcacagggccaaggaggagct +ctctagcaggccaagaccggtcgttttgatgatatctggcaagccagggataggaaaaacccacttagccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggtctcatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggacgactacgggatgagcaatcccatcca +cgatgcgctgaggctgcaggaactggcagacacatgtccattaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttacagggcc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcaggaagtgccagatagtctatggtggtaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctagaccactaactgaagatgcagatga--------ggccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttatcgtctcctcagatgatatcaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaagggctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggaaagaaatggcaagtactccatagaggaatatctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaaccgaagaagacttctgtgaggaagaagaggtcaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctgggtggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +agaacagatgtgtcaggtatgatactggaggagggagcgcctgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggcacccacgcgaccatgaggatacaagggcgc +acggtgggcggtcagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctacactcgagggtggtgac +aataaaggaacatactgtggggcaccaatcttaggccccgggaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacatacgagccggcatatctgggagggagagacccc +cgagtcaaaggtggaccatctctgcagcaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aaaccaccaaaaccaagtgtccttgaagctgctaaaaagacaattattaatgtgttagaacaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgtgcgtctctcgacaaaaccacatctagtgggtaccctcac +cacgtgcgcaagaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcgtcgaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttatacagctgcccttaaggatgagttggtcaag +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggccaccatggtgcggtgc +gcgcgctcctttggtggtttgatggacgaactcaaggcccactgtgtaacacttccgataagggttggtatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacagatatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattttcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcccagtgttgttgacgtgggcgacttc +aaaatttccatcaacgaaggattaccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctcccctgacattgtgcaggccaactccctcttc +tctttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacgggaaagttg +agagaatatggcctcaaacccactcgccctgacaaaaccgagggccccttgattattagtgwggatctgaat +ggcctgaccttcctgaggagaaccgttactcgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggactaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgagccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctccccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgtttcctcatgt +aattatagatgtgagaaccttggaacctgtcttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgaccagaccttcccctgactttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatacaat----------------- +----------------gttaccatcacaaacctgaatggttccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaatagtcctggacacaatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcaaattcaaattggca---------catggcagac +cgatgacct---tacagtcaaccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggttcccag +gtatgctggtgcc-ctaaat------ctcaacacaaatcttgccccttctgttgctccagtgtttccagggg +agcgcctactcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagatccaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----cctcacgtgg------gacatgggcatc----------aaattca------ +-------------------------------actcgc----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702263.1/1-7375 |Norovirus GII strain Hu/BT/2014/GII.P21-GII.13/ETR-NV-113 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------agtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggatacaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tccctcacccaacgg------ggaggacgaaccaaccatt +tcttacagcg----------tcaa---agagggtgtttctggtttgcctgaactcctaacggtcacccaacc +ggaagagagctctacggcattcagcgtccctcctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattacatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccctaccaggactggaacagaaaacctct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagagtctctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctacaggggcctgaggacctcgctgtgga +actcgttcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagacaaacgagttggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggacccttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaagtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgacacaatgagggtcggatcacaactcaagaacgtcaaaaccgtgacagaacttaaacagg +ctctcaagaacatcacagtcaggaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgaaaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacagaacctatggt +caaaaccacaagtggaagatttggagga--------ggctagcaacaaggagggctgtccaaaacctaaa-- +-gat----gacgagg---agtttgttatctcttctgatgacatcaaagctgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagagcaactgaggaggatttctgtgaggaagaggaggccaaaattcggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagagaaatcctgatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgactttgaggctccaccaagcatttggtcacgaatagtcaactttggctcaggatggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggcgcacaggagttcttt +ggagtgcctattaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggaccgatgtcacgggcatgatattagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaactcagtacyaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagactacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaagattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtgtatacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagacttctatggggttcggacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgaactcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctagaaataatgg-tcaaattttcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacttcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggaggacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctacagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctatcgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagaatttacagtatcacccagaaattcccctgg +agagattctattaaatttagagttgggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttgcctgatgttaggaatgtgttctaccattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgacgttttcactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattgaccatttctgaactaaccaa +ctcccgg---ttccccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtggg--g------acaattggg----------------------------------- +----------acc----------------------------------agaatttg----------------- +----------------ctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggagtgttgacccaag---acaa------------ +-----tgtaagtgagggtacaggggaggccaaa--------aat-----------gctaagggagtatacat +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcat------------tcaataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggttgctcagaatga------------aaacactcccttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattgctgttcttcaggtcccgtgttccatgt---gttcaaggtttgcg--------------ggggca +ggatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgatgtgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattataataaacaa--- +------------------------------ctccaaaatgcatcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccatctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcacc-ccctc--------- +gc-------------cagtccatcgggcg----caggt---------------------------------- +--------------------------------------gaagtccccttccaattcatcc-cagcggactgc +agttccaagcag------------------------tatccgcagcctgtcaacccaatcaac--------- +---ttctt--------------------------------taggctccacctc------------------- +------------------------ctcaggg------gggtcctct-------------------------a +cagcctc--------c------------------------------------t------------------c +tagttc---------------------------------------gaggacagcagattgggtgcaacaaca +a---agggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702264.1/1-6993 |Norovirus GII strain Hu/NP/2014/GII.P21-GII.21/ETR-NV-117 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacagccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgaacctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgaatatgagctacaggggcctgaggacctcgctgtgga +actcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaacacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgcgggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaagaagtgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaatgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcagatatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gat----gacgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagatttctgtgaggaagaggaagccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttcaaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaycagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aay-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctggtcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctartgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtca--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702265.1/1-7220 |Norovirus GII strain Hu/NP/2014/GII.P2-GII.2/ETR-NV-121 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------------------------------c +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgctctgcagatatccaacgtggaattgacacccctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggct +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaagcctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccattaaggatataattggtaaacttaaaccccttaacatcctaaatattctggcctcatgcgattg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggctattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatgggatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttgcacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaaccttcaactttgaccgtaacaaaattgcagcgttcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctatggtggtaacacttacacgcttgagtctgacg +gcaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgttaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------ggccaccataaaagaggggtgcccyaaacctagg-- +-gat----gaagaag---aatttatcgtctcctcagatgatatcaagccagagggtaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaagggcttagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcgactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcgggcgagttctgtcgcctgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcctgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaagaatgggcacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggaccttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttaggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgttagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcgaaggca +aacctaatgtttgaagaggggaaacacatgaccccagtttatacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggatgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaacgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatatcaaattagacccagaaaagttgacggggaagttg +agagaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagcgaggatctgaat +ggcctgaccttcctgaggagaaccgttacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtattggaccaaaggccctaatcatgaagacccctttgagtcaatgattccacattcc +cagaggcccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +gggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgactttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccccgc +ccctctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttgccactcagtcttcaaggccaactctg +accacaaccactggtt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctcccccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggra---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcg------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702266.1/1-6663 |Norovirus GII strain Hu/BT/2015/GII.P4_New_Orleans_2009-GII.4_Sydney_2012/ETR-NV-130 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------atatccacaacatcttagcctcatgtgattg +gacctttgcgggtatagtggaatccctgatactcttggcagaactcttt---ggagttttctgggcaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaattgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatctggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcatcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttctcaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcggggctgctccatgagaggttggatgaatttgaactgcagggcc +cagctcccaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacacgcattgccaagcgcatga------atatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactatcagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagagaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggttacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtcgccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcctgagatttcctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatattgtggtgcaccaatcctaggcccagggagtgccccaacayttagcaccaagaccaaa +ttctggagatcgtccacagcatcgcttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataaaaccacttccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaagcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgccgactac +t-ctcggtgggattcaacacaacrgagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctcwggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcaccctctgtgcgctctctgaagtcacaaacctgtcycctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgatgtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgctgatccccttacccgatgttaggaataatttctaccatta +taaccaatcaagtgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccycgattttgactttatattttt +agtaccacccacagttgagtcaagaactaaaccattctctatcccagttttaacagttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagatccaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgy-----------ggccacaaagctacagt +gtacactggaagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtggcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggtcttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccaacacgatttggtcatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaagcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcagggttcctcc------------------ag +caaatcat-----------ctaac------------tcttctactgctactt-------------------- +----------ctttgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702267.1/1-7382 |Norovirus GII strain Hu/BT/2013/GII.P16-GII.3/ETR-NV-133 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +----------------------------------------------------------------------at +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aat---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagttatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +attgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatcgcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaaggacgacaggcttcttcagaccctaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattgaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagattacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacattggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagacatgtggaaggacgccttcaagtcggacttttcacatatcagattgc +aacttgctcctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtaatgaagaccctca +ccaccggttcccttattgcccgtgcgtcaggcttactgcacgagaggatggatgaatttgaactccaaggtc +ccacagtcaccaccttcaatttcgatcggaacagaatcaccgcattcagacaattggctgcggaaaacaagt +atgggttggtagacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgaccatcaagaggtgtcggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcagatgtgtgcaagaagcagtctactctatcatac +aaattgccggtgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaacga--------gtcagaggctaaagaagaggcccccaagtcagaa-- +-gac-------gacg---aattcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtat---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcagaggaaagaagagagggccacactagggctagtaactggttcagaaa +tcagaagaagaaaccctgatgatttcaaacctaaagggaaactgtgggccgatgacaacagaagcgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccataaatcaggtgaattttgccggttcagattcccaaaaccaatt +aggccagatgtaacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcggccagaatgggaacacacgcaaccatgaggattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggacttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactacatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggctctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgagcccaggggt +aaacccccaaagccaagtgtgttagaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctctagcgggtatccccac +cacgtccgaaagaatgaattctggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcggccctcaaggacgagctggtcaag +actgacaaagtctatgggaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcgcactgcatatcactcccagttcgagttggcatg +aacatgaatgaagacggcccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttagaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtggatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtgcaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaactggaccctgaaaagttaaccaccaaactg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccttgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgcgacccagctggctggtttggaaaattggaccagagttca +atactgaggcagatgtattggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcatggaccttctttctatagcaaaatt +agtaaattggtcataaccgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaacataataga +tccctggattatgaacaactttgtgcaagcacctggtggtgaatttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggctcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---ggggaaagtgat +ctttgcagctataccccccaatttcccaaccgacaatttgagtgcagcacaaattacaatgtgtccccatgt +aattgtggatgtcaggcagctggagccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +taatcaaggttctgat---tcgaggttacgcttaattgcaatgctgtacacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgcagggtattgactaggcccagccctgatttctcattcaatttcct +cgtcccgcctactgtggaatcaaagacaaaactttttaccctccctatcttgactatctctgagatgtccaa +ttctaga---tttccagtgccaattgattctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaacgggcgcgtcacccttgacggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagcgaccaagctgacacagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacagctagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctcttgggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaggt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tgrtgactt---tgacccaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggtgtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcact------cacaacatgaatctggccccagctgtcgctcccaattttcctggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggtgggcg------gtcca--------- +--atggtgtcctagactgcctggtcccccaggaatgggtccagcatttctatcaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccccgatactggtagggtgttatttgaggctaagctgcataa +gctgggctacatgaccatagctaagagtggtgattctccaataactgtgcccccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttatacactagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataacaaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccctatgacgaaagttctggactggagtggg +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcacagagct---------ataccaaattttaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaat------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tagtcagctcgatacc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgttactccacsatctagtac +agcctct---agct------------------------------tggaca---cagtctcamccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcttttcgcac +accttcgtaaaagggggga----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702269.1/1-7509 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-177 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcatgtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcamtccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttcgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702270.1/1-7509 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-180 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------awcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ctaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcgatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702271.1/1-7454 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-181 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +-------------------------aaatctacaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +taactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaaaggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggcgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggyttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaa------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702272.1/1-7460 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-183 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------------------------------------------------------------agc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcgatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------r +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702273.1/1-7357 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-184 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------------aataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +aaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagacggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtctgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702274.1/1-7035 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-185 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------tagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgttaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggttatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttyaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaakccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcgatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggcagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaasaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +rcaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatct-----------gcagagct-c-------- +---c-g-g---caat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702275.1/1-7099 |Norovirus GII strain Hu/BT/2012/GII.Pe-GII.4_Sydney_2012/ETR-NV-186 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------ctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaractgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagttattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcgatgttgtatacgccacttagggctaataatgc +tggggatgatgtcttyacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccawa----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgaccyaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatctttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctattcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702276.1/1-7288 |Norovirus GII strain Hu/BT/2013/GII.P16-GII.13/ETR-NV-189 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------------------ggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccrct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcatagggaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggggtagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggatcggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttaaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatccggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccarggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctggtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtwcaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccctactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcacccagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---gggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttttatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccatttacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctaccyaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +aacaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------aaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcaaacggcatacgtcacaccgccgtctagtag +ggcttcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtgtag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702277.1/1-7139 |Norovirus GII strain Hu/BT/2013/GII.P16-GII.13/ETR-NV-195 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------------------------------------------------------------aacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataycactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcatagggaaaattaagccattaaacatcttgaacatcctggtaacgtgtgactg +gacattcgccggagtagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactaccagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggatcggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttaaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgtatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatccggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttgrccggagcyc +tgcatcacctcawacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctggtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacaaatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatggcaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggacctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcacccagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---gggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttttatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccatttacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgttctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +aacaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgcagtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcaaacggcatacgtcacaccgccgtctagtag +ggcttcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcacr--------ggattag--t-----------ga---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702278.1/1-7101 |Norovirus GII strain Hu/BT/2013/GII.P21-GII.21/ETR-NV-207 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------------------------------------------------------------tatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agacgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +gctcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcawwttggt +catgaagtggtttttcccaaagaaagacgagataaacgagttggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaagactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaaaaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgctggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaggtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaag-- +-gat----gacgagg---agtttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactctatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagacttttgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggccattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aagccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatctcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattrgactcagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggaggacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactgcatggcccatcattctatagtaaaatt +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgaacccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtataa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---agggaagatcct +ttttgcagcagtccccccaaacttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccccctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctttacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctaccccggactttgagtttacatactt +agttcccccctcggttgagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggtacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccagtggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtggggtctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +aacaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcacag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtatttcagatt +tgattcctgggtcaaccagttttacgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggttaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcatccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctat--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctctaccgcggacgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-attcttt--------------------------------caaatt-------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702279.1/1-6920 |Norovirus GII strain Hu/BT/2011/GII.P21-GII.21/ETR-NV-243 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------------------------------------------------------------tatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaacaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacattctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcawwttggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaagaagtgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggrgctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gat----gacgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagyacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttycccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgattgatcagttgtamacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------ratttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggcyaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtracatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtca--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702280.1/1-6986 |Norovirus GII strain Hu/BT/2012/GII.P21-GII.21/ETR-NV-251 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------------------atcttcatgtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccr-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaagtccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggrctagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgst +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgagttggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgaactctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaaa-- +-gat----gacgagg---agtttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggaatacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaagggactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gcccgtggaggaaacactgtcatatgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattgtctctgaagatttggat +ggcctgaccttcttacggaggacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaacttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctttacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatactt +agttcccccctcggtagagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggtttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccctctca +gagtgacgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggttgtgccccccaatgggtatttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaat----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702281.1/1-7102 |Norovirus GII strain Hu/BT/2012/GII.P21-GII.21/ETR-NV-256 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------------------------------------------------------------tatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcactcaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agacgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +gctcgtgcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgagttggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaagactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaacttaaacagg +ctctcaaaaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgctggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaggtggaagatttggagga--------gactagcaacaaggagggctgtccaaaacctaag-- +-gat----gacgagg---agtttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactctatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagggcaactgaggaagacttttgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggcgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgccccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggccattggagttcacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aagccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgactccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatctcaatcaatgaggggctaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattrgactcagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggaggacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacaaatgtactggaccaggggaccaaaccatgaggacccctctgaaayaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactgcatggcccatcattctatagtaaaatt +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtaaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcagatmtcgtaccagagatcaacactga +gaccttgcccctcgaacccgtggccggagcggcaattgctgcccctgttacgggccaaaacaatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtataa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---agggaagatcct +ttttgcagcagtccccccaaacttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccactt +aattgtagatgtcagaactttggagcccattatgatccccctgcctgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctttacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctaccccggactttgagtttacatactt +agttcccccctcggttgagtctaaaaccaagcctttcaccctacccatcctaacaattggagagctgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggtacaacacaacttttgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccagtggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtggggtctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aatttacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +aacaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatggatttcccacttctatcaagaatcagccccmtctca +gagtgatgtggctttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaactgcacag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtatttcagatt +tgattcctgggtcaaccagttttacgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggttaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcatccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tctat--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctctaccgcggacgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-attcttt--------------------------------caaattc------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702282.1/1-7408 |Norovirus GII strain Hu/BT/2014/GII.P21-GII.21/ETR-NV-293 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctttcgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aaa---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtctgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcgaaggaacccct +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgaactatcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttaaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatggactggagatactcawattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccatcgagaacaaccatatgacagctctactcaaggataaggacagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtccagcagacctcgaccggtcgttgtgatgatttcagggaaaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaattgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataactaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctctacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacagggagggctgcccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagcgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagttaactttggttcagggtggg +gcttctgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgtcggctaagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaacgccaagagtatggacttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgat +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagcaccaaaaccaaa +ttctggagatcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtggggggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaaaattggcagaccaagcatcaaaagct +aatttaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacagataccattaygatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggttaccctctggtgtgccttgyacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgactcgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacaactgatgtcactactaggtgaagctgcactacatggtccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataacataattga +tccctggattagaaataattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaacgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtccaaaaccaagcctttcaccctacccatcctaacaattggagagttgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttctgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaagtgtcccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatgggtttcccacttctatcaagaatcagctccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaaatgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccawaacaacaagccaatctggtcagttctcc-tctgt--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aaccaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagctcttc---------------- +----------------------ttcacttgg------gactccttcaac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcggactgggttcgaagtca +g---aggaacctgagcccctacatgg---acggagctctgcagacagcctttatcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggtgttgaa-cgcaggtgtccaggagt------------ccaaaaccc--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702283.1/1-7002 |Norovirus GII strain Hu/BT/2014/GII.P16-GII.13/ETR-NV-312 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagtttgagagaaaacagggaggccaaggaaccgct +gacgggggcaatattagagatgtgggatggagagatataccactatggtctgtacgtggagaaggrcctagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaacgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttatcaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaagccattaaacatattgaacatcctagcaacgtgcgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttctttccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggtaaaccagggataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcga +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctaatcgcccgtgcatcaggcttactgcatgagagaatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaaccaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcagagttctggtggaaaaggtcaaraacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaarcatgccagaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattttac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctgagaaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcctctaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +acgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaagatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaggaaggtgcgcctgagggcaccgtggcaaccgtgctcattaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacacctcttccaccagggacgtatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagctaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaaa +acagacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gccaggtcttttggtgggctcatggatgagatgaaaacacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-ctcgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cggagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaaggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaagttggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agcaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctatygctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagartttacagtgtcaccsagaaattcccctgg +agagattytattaaatttagagytgggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtrgatatgatyagcccagctcaaattacyatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttrcctgatgttaggaatgtgttctaycattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgaygtyttyactgtgtcttgtagagtgttgactaggccaacccctgaytttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactyccaatattgaccatttctgaactaaccaa +ctcccgg---ttycccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctrytatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccargatttcagtgggatattgtatggrgtgttracccaag---ayaatgtragtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggrarattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtygctc---agaatgaaaayacyccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctygct------ctaaayaccaatttggcacccgctgttgccccgactttccctggcg +agcaattrctgttyttcaggtcccgtgttccatgt--gttcaaggtytgcgg------gggcag-------- +-gatgctttcatagaytgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgtygccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccraatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcattcatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccatctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +a----------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702284.1/1-7440 |Norovirus GII strain Hu/KH/2016/GII.P7-GII.6/ETR-NV-361 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------------gcgtctacc-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcacac +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctagaaccaccggcttctttaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcttccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccgaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccatcaatgccatactagctagaatagctgctgctaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaatggggt +tgatcattgggacgcctacagaggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttctcccacataaaactga +ctctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttatagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctccgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttaggctcagacaggcgagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcwtcattcgtcgtyw---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaaaggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggtttaggttcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccttacatctacaagcgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaaggaaatgag +aatcttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgataaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaacgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataaggtctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagagtgggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagacgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcact +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgag---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagctcaacccttacctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtatcttgcagagttctgacccgccctgcccctgactttgagttcacgttttt +ggtgccgccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttatacacagaccccaatgagacaattgtggtgcaaccaca +aaatggcaggtgcacactagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtataccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgtattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaagttgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaaatactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatggg +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagtaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctaccgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttctac-------------------cct--------------atctaggactagtgattgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccgtga---------ctcc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702285.1/1-7326 |Norovirus GII strain Hu/KH/2015/GII.P21-GII.21/ETR-NV-365 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------------------------------------------------------------tatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------ttaa---agagggtgtttctggtctgcctgwactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagatgcgaaggaacccct +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgaactatcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttaaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatggactggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccatcgagaacaaccatatgacagctctactcaaggataaggacagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtccagcagacctcgaccggtcgttgtgatgatttcagggaaaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaattgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataactaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctctacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcayagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacagggagggctgcccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagcgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagttaactttggttcagggtggg +gcttctgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgtcggctaagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaacgccaagagtatggacttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgat +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagcaccaaaaccaaa +ttctggagatcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtggggggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaaaattggcagaccaagcatcaaaagct +aatttaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggttaccctctggtgtgccttgyacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgactcgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +cagagacccatacaactgatgtcactactaggtgaagctgcactacatggtccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataacataattga +tccctggattagaaataattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaacgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtccaaaaccaagcctttcaccctacccatcctaacaattggagagttgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttctgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaagtgtcccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatgggtttcccacttctatcaagaatcagctccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcgcacaatctttgaggccaaactgcatag +gcaggggtttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaaatgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccawaacaacaagccaatctggtcagttctcc-tctgt--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aaccaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagctcttc---------------- +----------------------ttcacttgg------gactccttcaac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcggactgggttcgaagtca +g---aggaacctgagcccctacatgg---mcggagctctgcagacagcctttatcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggttttgga-ctcctggacacctgcgt------------tcaacacccccc------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702286.1/1-7425 |Norovirus GII strain Hu/KH/2016/GII.P7-GII.6/ETR-NV-382 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcacac +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctagaaccaccggcttctttaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcttccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccgaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccatcaatgccatactagctagaatagctgctgctaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaatggggt +tgatcattgggacgcctacagaggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccatttcaagccagacttctcccacataaaactga +ctctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttatagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctccgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttaggctcagacaggcgagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcwtcattcgtcgtya---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaaaggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggtttaggttcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgtggttgtccttacatctacaagcgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaaggaaatgag +aatcttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgataaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaacgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataaggtctacaagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagagtgggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagacgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcact +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggttatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgag---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttttaaatcttgaattaggccctgagctcaacccttacctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtatcttgcagagttctgacccgccctgcccctgactttgagttcacgttttt +ggtgccgccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttatacacagaccccaatgagacaattgtggtgcaaccaca +aaatggcaggtgcacactagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtataccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgtattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaagttgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaaatactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatggg +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagtaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctaccgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttctac-------------------cct--------------atctaggactagtgattgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctg----------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702287.1/1-6280 |Norovirus GII strain Hu/BT/2013/GII.P16-GII.3/ETR-NV-388 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +--------------acctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctttgatactactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgctgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatctcggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctagctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctacgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgwgacttccctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aacttgctcctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtaatgaagaccctca +ccaccggttcccttattgcccgtgcgtcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcggaaaacaagt +atgggttggtagacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgtcggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggagccc +tgcatcatctcaaacatgcccgaatcaggtactatgtcagatgtgtgcaagaagcagtctactctatcatac +aaattgccggtgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccgccatt---agaccaaaacga--------gtcagaggctaaagaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggtaaaaaca +aaactggccgtggtaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaacgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaagaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaaacagaggaaagaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacctaaagggaaactgtgggccgatgacaacagaagcgttgact +acaatgagaaattagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccataaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtaataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggtggacagatgggtatgttgctcactggttcaaatgctaaaggaatggacttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaagaggcaatgactacatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaattcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggggcaccaaaattgagcaycaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgagcccaggggt +aagcctccaaggccaagtgtgttagaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctctagcgggcatccccac +cacgtccgaaagaatgaattctggaacggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gctaggtcctttggtgggcttatggatgagatgaaggcgcactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtattggcagcagccttagaaatcatgg-tcaggttttctg +cagagccacaatt-ggcacaaacagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccttctggtgtaccatgcacttctcagtggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaggtcaccaaactgtcccctgacattgtgcaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgatataaaactggaccctgaaaagctaaccaccaaactg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgcgacccagctggctggtttggaaaattggaccaaagttca +atactgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcatggaccttctttctatagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaacataataga +tccctggattatgaacaactttgtgcaagcacctggtggtgaatttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggctcatcttgctaggatgtacaa +tggttatgcgggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---ggggaaagtgat +ctttgcagctataccccccaatttcccaaccgacaacttgagtgcagcacaaattacaatgtgtccccatgt +aattgtggatgtcaggcagctggagccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +caatcaaggttccgat---tcgaggttacgcttaattgcaatgttgtacacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagccctgatttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaactttttaccctccctattttgactatctctgagatgtctaa +ttctagg---tttccagtgccaattgattctctgcacaccagtccaactgacaacattgttgtccagtgcca +aaacgggcgcgtcacccttgacggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgatcaagctgacgcagcaaccccc----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tactggcacatacagctagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctcttgggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tagtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattctggtcag-ttcact------cacaacatgaatctggccccagctgtcgctcccaattttcctggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggtgggcg------gtcca--------- +--atggtatcctagattgcctggtcccccaggaatgggtccagcatttctatcaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgacactggtagggtgttatttgaggctaagctgcataa +gctgggctacatgaccatagctaagagtggtgattctccaataactgtgcccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacactagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaacaataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccatgacaaaagttstggactggagtggg +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgt---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH702288.1/1-7265 |Norovirus GII strain Hu/BT/2014/GII.P7-GII.6/ETR-NV-393 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +--------c----agtatcaacaccgcccctcctaataaagaagaggt------tggtgcattctccaacat +caaagttggctttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccatcagttaagatcgggactaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctgggggtccacaagccccctgcagcgataagcctcgcgacgatagagctcacccccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tycaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacatttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacattttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgttga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcarcactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctagacatggaggctataggaaataatcatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatattggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacctgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcctatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttttggtctatgcagagtcaccagaaattgagaaggtca +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagagaagagacgagtttcagctccagggga +acgaccttcagacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctggaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccagataccgagtctcttccaatg +gtaaaggctctgtctctgttgacagagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcgagagccagatattatgtcagctgcttccaagacctcgtttacaccctaatac +aggtcgccggagcatcaytcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtaaaaccaaccgagac-------------ccaggaaacaagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggaatatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggttcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcttgatcacaacaacacacgtcctgcctaagggaattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaagcagtccttgaaggaaacgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctgaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cccgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgttaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagct +aacctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaattagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggccttcggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggtcgcagaggacctcctggcacccagccaactcgatgttggcgatttc +gtcatctcagtccaggagggcctgccatcgggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacattaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtgataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtattggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcataaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---cgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttatcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacacccctcagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagcccttcacactccctattctgactcttggagaactgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggtaggtgcactctagatggaacacttcaagggactacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaatag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcatat +agataccacaaaccctagatacaccccaaagcttggctctgtgctgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccta- +--------ttggcatgggggccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagtcgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtctgcggtggctcttatcagatacgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaggtacaggccactaaacagctccagcaggaaatgatgaatataaggcaaggggtcttgtccgctggc +ggcttttcccccacagatgccgcgagaggtgctgtgaacgcgccgatgacaaagattttggattggagtgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgattc---------------------------c +ccaa-------------------aagtcaaagttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctctgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacgacatcctctt---------ctgc---agc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atg---------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH746922.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25449-SC-LVCA/2016/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctaacaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttacagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcaggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaacaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccttacacggcctttgacaacaactgctatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccaccctcctcaaggataaagacagcctggccacata +catgagaactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgactttcctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgataaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctagatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaagtctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgctgcactcaaagacgagctcgtgaaa +actgacaaaatttatggtaaaatcaagaagagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattat +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgacttgaacccttatttagctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgattggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aaccaaaacctgcaaagcctgg--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH746923.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25743-MG-LVCA/2016/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactatccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagtctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ttcgagtagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagatgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaacctttaattttgaccgcaacaaggtcgccgccttcagacaactagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacgacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggtaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctagaagcggcgcttgaaatcatgg-tgagattttctg +ctgagccacaact-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagctgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggtgctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccctacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacagttgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacattgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcaactgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacttctgca--------- +cc--------------tgtgcatatgtctaacccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH746924.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25745-MG-LVCA/2016/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactatccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagtctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ttcgagtagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagatgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaacctttaattttgaccgcaacaaggtcgccgccttcagacaactagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacgacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggtaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctagaagcggcgcttgaaatcatgg-tgagattttctg +ctgagccacaact-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagctgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggtgctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccctacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacagttgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacattgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcaactgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacttctgca--------- +cc--------------tgtgcatatgtctaacccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH746925.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25746-MG-LVCA/2016/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccaacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctatcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaagaggaggctaacgaactatccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagtctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ttcgagtagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagatgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtaaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaacctttaattttgaccgcaacaaggtcgccgccttcagacaactagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcaggaaaaggaatccagatgactttcaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctacgaaagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacgacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggtaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcatcccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +acgccaccaaacccaaatgtcttagagtcagcaaagacgactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctagaagcggcgcttgaaatcatgg-tgagattttctg +ctgagccacaact-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaatcatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagctgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggtgctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgtagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccctacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacagttgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttatcccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacattgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcaactgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacttctgca--------- +cc--------------tgtgcatatgtctaacccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaggttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH747479.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/24928-SC-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttaggccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctagccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacacttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggacttgtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccccataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caacttcgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagacccgacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaattgaaaagtgttaagaccatggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +aatctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggattgtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgctcctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgcccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacagaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtgggtacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccctgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgagtctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgctcttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctaac------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaatcgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagccttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacgcacagacagccgctcttcgcac +acttcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH747480.1/1-7485 |Norovirus GII strain Hu/GII.P17_GII.17/24933-RS-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggttgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactctcaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgctgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcgttggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccatgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +cacgaagtggttcttccccaaaaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactctcgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtaaaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagatcagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattaagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttggacttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caacgacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taataaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +cgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggcccactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccagaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggaggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +agaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH747481.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/25060-RS-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggttgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcaggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgctgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaacgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcgttggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccatgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattagt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactagtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgtttgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgatcggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaattttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctagaatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaagaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggaaagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caacgacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggctcatttgtcaagaatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taataaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcactgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------agttcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactggaaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggaggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgccttcacaaaattgacagatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +agaagttttgga-ctcctggacatctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH747482.1/1-7476 |Norovirus GII strain Hu/GII.P17_GII.17/25066-RS-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccagggactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctttgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagaccgagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgactctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattaagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatttgcaaggataagatactatgttaaatgtttccaagaggccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +ttagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagcctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaaaccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaagttgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaaaggaggcccatctctgcaacaagttatgagagaccaacttaacccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcggcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcgaggagaaattaccagtttacaccgcagcactcaaagatgagctcgtgaaa +actgacaaaatttatggaagaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacaacgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggcccatctgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taataaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccagctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctctacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggtgtcaatgatgacgatgatg---------gcaacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggcttttattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggaggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaa---------t +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH890538.1/1-7488 |Norovirus GII strain Hu/GII.P17_GII.17/24936-RS-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggttgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactctcaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgctgggtcctagaactcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcgttggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccatgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +cacgaagtggttcttccccaaaaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactctcgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattaagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttggacttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caacgacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taataaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +cgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaaccagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccagaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggaggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +agaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH890539.1/1-7476 |Norovirus GII strain Hu/GII.P17_GII.17/25067-RS-LVCA/2015/BRA nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccagggactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctttgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagaccgagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgactctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattaagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatttgcaaggataagatactatgttaaatgtttccaagaggccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaagagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +ttagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagcctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaaaccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaagttgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaaaggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcggcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagatgagctcgtgaaa +actgacaaaatttatggaagaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacaacgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggcccatctgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taataaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccagctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctctacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggtgtcaatgatgacgatgatg---------gcaacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggcttttattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaaggtagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggaggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaa---------t +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG733284.1/1-7436 |Norovirus GII strain Hu/GII.4/WZ198/2013/CHN nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +-----------------------------------gtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaattgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcactacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagcgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaagaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttctgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcaagtt +tgattcgtgggtcaaccagttttatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatstacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggcaaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtcgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctakcak +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcasgcagccactcttcgctc +acattcgtaagcgaggggagtcaca--------ggcttaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG733285.1/1-7450 |Norovirus GII strain Hu/GII.4/WZ320/2013/CHN nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------gaagtt------------ggcacg +c------ac----aacgacatcgcaaatcttc--agtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaattgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcactacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagcgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaactatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaagaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggcaaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccattgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtcgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaag------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG733286.1/1-7433 |Norovirus GII strain Hu/GII.4/WZ700/2013/CHN nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +-----------------------------------gtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccaccc +agg---------------------cctccacggccacccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggattgcctgagctcaccactgtcagacaacc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaacagggacgctaaggagccact +gaccggaacaatcctggaaatgtgggaggggaagatctatctttatggtttgtatgtggagcgaggccttgt +acttggggggcacaaacccccagctgccatcaccctcgccagggttgaactcgcaccactttctctattttg +gaggccggtgtaccccccac---agaatctcatctctccaaaccctcttaggaagttgcatggaaagccttt +cccttacccggcctttgacaacaactgctatgccttctgttgtgggtatcagaacctaaccaactcggggtt +gtg---caggaaaatgatccaaaggacacctggttccttcaggccttaccaaaactggaccagaaaacccct +ccccctctggaataactccaatttaaaaaaggaagccaacatattctggggtgcgctatcttcgctattcac +taggcctatcaaagatataataggaaaggggagacctgctcacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgattctcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtaatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcaaccaccttaagagcttgtaaagatcttggtgcatatggattggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggccatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaggacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaattaactctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggataggaaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcccttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggtgaaagagtcgtcctatgggatgattatggaatgagtaatcccatcca +tgacgccctcaggttacaggaacttgctgacacctgccccctcacgttgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccattggattatgt +caactttgaagcatg-ttcgaggcgcattgatttcctcgtgtatgcagaagcccctgaggtggagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcttctagttctgacttctcgcacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacacgggaaaggggtcatgaagaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggttagatgaatatgagctgcagggcc +caactctcaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +atggattgatggacacaatgagagttgg--agcagctc-aggatgtcaagaccatgtcggagctcaaacagg +cactcaagaatgtcgcaatcaagaattgccagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccaccttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccgcaggtagaggatacagagga--------aaccgccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcagaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagggaagaaagaaatggtaaatactccatagaggagtaccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaggaagaggccaagatccgacaga +ggatcttcagaccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccgccgagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttc +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgccgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgattttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttgggggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacgtggtcattggagtccacacggctgcc +gcccgtggagggaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttaggtccaggaagtgctccaaaactcagcaccaagactaaa +ttctggaggtcgtccacggcaccactcccacctggcacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggtccctcattacaacaagttatgagggaccaactgaaaccattcactgagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcgtcaacgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcacaagcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaatgactgttggaacggggagtcctttacaggaaaattagcagaccaggcttccaaagct +aacctgatgtttgaggagggaaagaacatgaccccagtctacacgggtgcacttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +cagatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggcaaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtcgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG733287.1/1-7413 |Norovirus GII strain Hu/GII.4/WZ785/2013/CHN nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +--------------acgacatcgcaaatcttc--agtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagacggaagccaacatattcttgtgcactttgtcttccctattcac +cagacccataggacatataggaaggaa---------tcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaattgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcactacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacaggagcgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagatttccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaagaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagacagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaaattggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcgctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacttatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggcaaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggtcgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +ggagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgct- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073885.1/1-7555 |Norovirus GII.4 isolate Hu/USA/2016/GII.P16-GII.4 Sydney/Fresno-0182, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcatgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacagagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggaatacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgacgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccgaaacaaaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-aac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatctggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatc +agaccagatgtggcaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacacacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgctgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagatcat +atttgcagcagtcccaccaaattttccaaccgaaggcttaagtcctagccaagttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcactcaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctagggctacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------ttttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MK073886.1/1-7532 |Norovirus GII.3 isolate Hu/USA/2016/GII.P12-GII.3/AnnArbor-0027 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccaaagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccctaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtaagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaaggtcggaaaaatgtt +gtcatccgccgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttattatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatcccccgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----ggtgaag---agtttgttatctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaaacacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgttataccccagggcgcacaggagttcttt +ggtgtgcccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgtcggaggtcaaatgggcatgctcctaacagggtccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaagtggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaatgactgttggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggatgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttctgacctggcgaccatgattcggtgc +gctcgagcattcgggggactgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggattcaacacaacaaagagctgtgttggcggcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattgttcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctctcgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggttggtttgggaagttggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtccttgctgggagaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaatgcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacacgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgtaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccccccactgtggaatcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgactctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgaggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgaggcagacttccaacaatggtccttaccaga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactgtagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaacgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatattcacaaacactgta +gggtctctagttaatgcagg---ggctaatgctatcaatcaaaaagttgattttgaaaataacaaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcta--------------g +cgggtcta-----------g-------------------ctcattacca--tccttac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcgcttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------taggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-atttgatttg------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073888.1/1-7506 |Norovirus GII.4 isolate Hu/USA/2016/GII.P16-GII.4 Sydney/Roscommon-0105 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------accgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccctaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaacgagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagttttcgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaattcgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaagcaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctacaaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccgagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcagcggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +agtagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtggatgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccttgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggagcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----t--------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073889.1/1-7431 |Norovirus GII.4 isolate Hu/USA/2016/GII.P4 New Orleans-GII.4 Sydney/St.Louis-0113 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------------------------------tctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaactacaa +aga---------------------cccccgcgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactgggacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactcttaagaaattgtccggagagacgtt +cccctatacagcctttgataacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagacataatagggaagataagacctcttaatatcctcaacatcttggcctcatgtgactg +gaccttcgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctagcgagaattgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggtc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacgaggaaacaacgcaaggaggaaagggtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccgttcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactacgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttatcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaggcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073890.1/1-7473 |Norovirus GII.4 isolate Hu/USA/2016/GII.P16-GII.4 Sydney/Gallatin-0036 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------gaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccgcatgggaaaggagtaatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaagcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacgcgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ttaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatctgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------c------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073891.1/1-7553 |Norovirus GII.4 isolate Hu/USA/2016/GII.P16-GII.4 Sydney/Gallatin-0038 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +--------atgaagat---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccgcatgggaaaggagtaatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaagcccccccaagcatatggtctagaattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcaggtccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgttagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MK073894.1/1-7499 |Norovirus GII.4 isolate Hu/USA/2016/GII.P16-GII.4 Sydney/Nashville-0085 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgacggagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccattagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgctttttgctgctgggtgttagacctcaatgactcatggct +tag---taggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaagcccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacgccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcctgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +tctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcgtacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactaaaacaag +caatcagaaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaaatcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +ataatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagacgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctacaaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgcggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttatccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcatcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtagaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctactttaggtt +tgattcctgggtcaaccagttctatacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caagtctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaataggaatttgtcacccttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtc-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG692610.1/1-7556 |Norovirus GII isolate NS2014603, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtagtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatcccttgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatgttgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgagattctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG548737.1/1-7559 |Norovirus GII isolate Hu/GII.4/Suncheon/2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agacggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctcctgacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggagttggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacttggctaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacggaaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtattccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgagggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggggtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctctttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtattgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagagttcagttcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcctaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgccactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatatctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH979229.1/1-7546 |Norovirus GII isolate Hu/GIIP16_GII.2/CGMH1420/2018/TW, complete genome +----gtgaatgaagat---ggcgtcgaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggaccaaacagcct-gccccgagtgacaaaccacaa +aag---------------------cccccaagaccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccat +gcctaccatggatgattccaaaattaaaaaggtagcaaatatattcctatgttcattgtcctcattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agacgtgtctgctatgattgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagagccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcttacaagaattggctgatacgtgtccctttactttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcgccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacaccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacactccacatgggaaaggagtgatgaagaccctca +ccactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttgactggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +agattgccggcgctgcgtttgtcaccacgcgcattgctcgccgtatga------acatacaggaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcggaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggtcgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaggctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaattccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaggatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattaaatctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttccagtctcctgtagagtgttgactagaccttcccctgactttgacttcacgtacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatctgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgcg------------------------------------------------tg---- +-------acgatg----------------------------------aacac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctctcaaa---gagacaaacacaatgg +tcct--------ggacaaaatgaaccagcaaat--------agg-----------ggacacgacgctgtggt +ccctactcacacagcaaagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacat---tacagtcaaccaaccagtca---------------------------aattcaccccaa- +--------ttggactc---------aatgacattgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcttgctcttcttcagatcacacattccc------ctcaaaggtggtta------tggag--------- +--acccagccattgattgcttactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggttacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgcaaatgcaataaatcagaaggtagaatttgattttaatcagaaattg +caggaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggactggaatggc +acaaggtattgggcaccaaactccatgaggaccacattttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggccc-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaacttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgccccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacaaccgcaggcagccgctttttgcac +acctccgcaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MH979230.1/1-7516 |Norovirus GII isolate Hu/GIIPe-GII.4 sydney/CGMH1411/2018/TW, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------atgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggtgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaagatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aaccggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtgtacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgaggacccttgaccttgaggaggagaaagccagaaaactttcaaccaaatctgcctcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcaccgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggataggaaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatgggatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtcttcgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgttcgccgaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gtaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaattggccggtgccc +tacaccatctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaaggtggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagaggacctctctcggcttggttacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaacccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcacccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcacgtcccttgacaaaaccacctccagcggccacccgcac +cacatgaggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaagcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +tccccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatggtttaagttctctc +cagaaccacacctgggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggcctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtttgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaactggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcacgcc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccgtcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtaaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaattccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacacc------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaaagtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtcacctttcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH997861.1/1-7551 |Norovirus GII nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------taac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggttgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggacgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaacatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagttagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagcgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtatggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacacaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagctttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggaaaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgctcctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaacgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacctactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaacggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagcctacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggagag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagatgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcatag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaa------------------- +------------------------------------------------------------------------ +- +>LC421227.1/1-7386 |Norovirus GII Hu/GII.P12-GII.4sydney_2012/330077/Tokyo/2017/ POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, small basic protein VP2, partial and complete cds +------------------------------------------------------------------------ +-------------aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgtactgcaggggcctgaggaccttgcagtgga +actagtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgaccaccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgtcatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacttttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggacgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggagaacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggctaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcagaaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ctagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcttagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgtgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgcgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccctagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgctcactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggatccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaggatccatctgaaacaatgataccacactcc +cagagacccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcaccatgttcccccatat +agtagtggatgttagacaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cccaatgtgcatctggctcccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcggccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatc---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttatcacctttcatga---ggggggtccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctgg---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC421228.1/1-7400 |Norovirus GII Hu/GII.P12-GII.4sydney_2012/330078/Tokyo/2017/ POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, small basic protein VP2, partial and complete cds +--------------------------------cgcttccgctgccgttgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgtactgcaggggcctgaggaccttgcagtgga +actagtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgaccaccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgtcatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacttttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggattgttggacacaatgagagttggaaaacagctcaaggacgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcat +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacacgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggagaacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggctaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcagaaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ctagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcttagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgtgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgcgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccctagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgctcactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggatccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaggatccatctgaaacaatgataccacactcc +cagagacccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcaccatgttcccccatat +agtagtggatgttagacaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttatatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccatcgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cccaatgtgcatctggctcccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcggccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatc---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aacaacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttatcacctttcatga---ggggggtccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +ag---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH791993.1/1-7363 |Norovirus GII isolate ST368 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----gttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaggac------gccgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccactgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcactcggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagattttagacctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacctggccaagagtgtcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggatgcctacaggggagagagggtggttttatgggatgactatggcatgggaaaccctgtcaa +agatgccctaacgttgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacaaggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgatgccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaggatctgaaagttg +cactgagggacgtgaagttcagtgagtgtgagataatttacagaaactctaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagtgggtgcagcaa +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagttgcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaaaggcaacctgtgggcagacgacactaggagcgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagattcagatccataagtctggagagttctgcaggttcagatttccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccaccaggcacttatgagcctgcctacttggggggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgat +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggctaaacatgtgcagcctgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccgtgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgattat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gttatctcagtccaggagggcctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagcgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctatggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtacccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcaccagg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgggtcatttgtcccgcatgtacaa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaaccgtggagtcaaagactaaaccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagatatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtct------gc----------------------------agactcaactg--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttgggatcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +aaatgattt---tgatgatggacaacctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggtg +agcgcattctcttcttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +atccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaatcccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaattaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaaaacaaccagttattcggg-ccagttttccagcaaccctatgca +ta-----------ggcaacccactttaccc---cgttctgcacc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctctgactg-------tggg--------gt +ctggctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccacaggcagcctctcttcgctc +atgtgcgcaggcgagggg------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH608287.1/1-7205 |Norovirus GII isolate NV/CMRHP59/CAM/2014 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------aatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatactagagatgtgggatggagagatataccactatggtctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagaccttaatgactcatggct +taa---caggaggatggtgcaaaggacaacaggctttttcagaccttaccaagagtggaacagaaaacccct +gcccactatagatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaagattaagccattaaacatcttaaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgcagaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggagactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggatcggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaaatggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgctgaaagacaaagacagcctagcaaccta +catgaaaaccctagacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcggcggctaggtcactagtccacagggctaaggaggagtt +gtctagcaggatgaggccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggcgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaactggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagctccacttgattatgt +caacttcgaggcctg-ttccaggaggattgacttcctggtgtacgctgaggcgccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggatgccttcaagtcggacttttcacatatcaagttgc +aacttgcaccccaaggcggctttgacaagaatggcaacaccccacacggaaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaatagaatcaccgcatttagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccgaatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacatctgtgcaaaccaacaacgagttggccggagccc +tgcaccacctcaaacatgcccgaatcaggtattatgtcaaatgtgtgcaagaagcagtctactctatcatac +agattgccggcgctgcgtttgtcaccacacgcattgtacgccgcatga------atatacaagagctttggt +cgaagccaccatt---agaccaaggtga--------atcagaggctagggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgcgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccacccggaaacaaaggaaggaagagagggccacattagggctagtaactggttcagaaa +tcagaaaaagaaaccctgacgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattc +ggagtccccatcaaacaaatccaggtccacaagtcaggtgaattttgccggctcaggttcccaaaaccaatc +agatcagatgtgacaggaatgatcttggaagaaggcgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagctagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcacaggttcaaatgctaaagggatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaagggacgtactgtggggcacccattctaggccctgggggggcaccgaatttgagcaccaaaaccaag +ttttggaggtcatcaaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagcgtattggaagcagccaaacaaaccatcatcaacgtcctcgagcaaaccctggac +cctccacaaaaatggacctatgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgaactggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gccaggtcctttggcggactcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttcccaatggaattccattgcacactgg +ctgctaaccctctgtgccttgtctgaagttaccaaactatctcctgacattgtacaggcaaattccatgttt +tcattttacggtgatgacgagattgtcagcaccgatataaaattggatcctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttccttcggcggacagtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttttacagcaaaatt +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttt +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccgtcgaa---tgatggtgcagctagtctcgtaccagaggccatcaatga +gactatgccattggaacccgttgctggtgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagccccaaatggagagtttacagtatcaccaagaaattcccctgg +ggagattctgttaaatttagagttagggccagatctgaacccttatttggcccatctatcaagaatgtacaa +tggatatgctggaggtgttgaagtgcaagtgctccttgctgggaatgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaatcactatgcttccccattt +gattgtagatgttaggacattagaacctattatgatacctttacctgatgttaggaatgtgttttatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaatttatttacct +ggtgcctccctctgtagagtccaagaccaaaccattcacacttccaatattgaccatttctgaattaaccaa +ctcccgg---tttcccaccccaattgagcaattgtacacggccccaaatgagaataatgttgtgcagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagagg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattatatggggtgttgacccaag---ataatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaaaattcaccccaaaaattgggtcaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcaacaatcac---------------------------ggttcacccctg- +--------ttggagttgctc---aaaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccgtgt--gttcaaggcctgccg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaatcacttttaccaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +atcaggttttatcactgtatcacatactggtgcctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +ggttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaacaaacaactt +caaaatg---------------------------------catcctttcaacatgacaaggaaatgttgcag +gcccaaattgatgctgcaaagaaactccagtcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgacccgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattccgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcacaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caatccat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccggagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtacaacaaca +aa---gggctcttagcccgtacatgc---aaggagccctgcagacggcatacgtaacaccgccgtctagtag +ggtctcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctatttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaataa-a-------- +---a-t-c-------------------------------------------ac-------------atttaa +a--cattgattatcc--------------------------------------------------------- +------------------------------------------------------------------------ +- +>MF802550.1/1-7437 |Norovirus GII isolate NoV/12025/16/NJ ORF1 and ORF2 genes, complete cds; and ORF3 gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaggaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcggttaagatcgggaccaagacattaacagtccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaaatcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctaggaccaccggcttcttcaagccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggagcttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaggggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactagt +tatgaagtggttcttcccaaagaaggaggagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccaaagagtggggctcgttccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcggagtcaccagaaatcgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactaa +ctctagccccacagggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcaactccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgcgagataatttacagaaactccaaataccgagtatcttccaatg +gcaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggggcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagggaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagaggcttgacttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacgacaacgcacgtcctacctaagggggttaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agatctacaggtgagatgattcccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcggtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccaactaaaacctttcacagaacccaggggt +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcgctggacaagaccacttccagtggtagcccccat +catgtcaggaaaaacgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcctgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaggtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +attctaaccctgagtgcaatggcagaagtatcgggtctttcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agggagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttccttcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagtatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtgagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaacacc---ccccggatgagacttgtggccatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacacttcctattctgactcttggggagctgtccaa +ttccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccggc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagcgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagtcgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcagtgctgg---ggccaatgcaattaaccaaaaagtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaagcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-tcagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgctctgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattccg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------t----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF802551.1/1-7390 |Norovirus GII isolate NoV/120952/16/NJ ORF1 and ORF2 genes, complete cds; and ORF3 gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +cgggacgatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacccaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cggttatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcggacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgatggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctca----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF802552.1/1-7238 |Norovirus GII isolate NoV/12194/16/NJ ORF1 and ORF2 genes, complete cds; and ORF3 gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacagcccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgacgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggaaccctt +gacagggtcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaaaggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaacttactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccatggggagtcatt +tccatatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacaggccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaagctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccccgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgccctcctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcttttaaatcggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaaggtccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagggtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaataacacggaggttga------acgtcagcagcatttggg +tcagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggttacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaaggggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagagaggtaacgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggtacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcgctacagcaagttatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +catatgaaaaagaatgataactggaacggagagtcctttaccggtgtgttggctgatcaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgaactcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagagcttttggaggcctcatggatgagatgaaagcaaattgtgtgaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggatgttggtgacttc +aagatcaccataaacgagggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttt +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +agggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaatttacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtattgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtctcatgtaggattcttactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggaatcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctccattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttgggcacaacccaactgcaagcatgtaacatttgttccat +acggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtctcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattggtgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattggggccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------caata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcagtcaact---------gttg +ttagcactt--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF802553.1/1-7238 |Norovirus GII isolate NoV/12196/16/NJ ORF1 and ORF2 genes, complete cds; and ORF3 gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacagcccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgacgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggaaccctt +gacagggtcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaaaggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaacttactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccatggggagtcatt +tccatatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacaggccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaagctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccccgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgccctcctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcttttaaatcggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaaggtccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagggtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaataacacggaggttga------acgtcagcagcatttggg +tcagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggttacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaaggggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagagaggtaacgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcaccaagactaaa +ttctggaggtcatccaacgccccactcccgcctggtacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcgctacagcaagttatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +catatgaaaaagaatgataactggaacggagagtcctttaccggtgtgttggctgatcaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgaactcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagagcttttggaggcctcatggatgagatgaaagcaaattgtgtgaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggatgttggtgacttc +aagatcaccataaacgagggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttt +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +agggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaatttacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtattgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtctcatgtaggattcttactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctccattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttgggcacaacccaactgcaagcatgtaacatttgttccat +acggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtctcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattggtgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcagtcaact---------gttg +ttagcactt--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF802554.1/1-7238 |Norovirus GII isolate NoV/12197/16/NJ ORF1 and ORF2 genes, complete cds; and ORF3 gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaataccagcacaaacagt +gtgattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacagcccgctcccaggattccttccccca +acagggagggaagacatgaaaccacccctagagctccccctccgaacaagggaggtaa--tgctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaag +tataccaagc----------aaga---tgacgcggttgaaggggtgcccaccgtcgccacggttgacgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggaaccctt +gacagggtcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaaaggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaacttactcccctctccctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaaactccatggggagtcatt +tccatatacagcctttgacaacaattgttactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacaggccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaagctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccccgaggatatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgct +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgccctcctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcttttaaatcggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaaggtccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagggtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaataacacggaggttga------acgtcagcagcatttggg +tcagaccaga------------aaaaca--------ggtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggttacaggtagtgaaa +taaggaagaggaacccagatgatttcaagccaaggggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttc +ggtgtaccaataagccagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggcacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccatccct +ggagactgtggttgtccctatgtttacaagagaggtaacgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcaccaagactaaa +ttctggaggtcatccaacgccccactcccgcctggtacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcgctacagcaagttatgagggaacaactcaaacctttcacagccccccgaggg +aagcccccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctagacaaaacaacatccagtggccatccccac +catatgaaaaagaatgataactggaacggagagtcctttaccggtgtgttggctgatcaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtatactgccgccctcaaagacgaactcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagagcttttggaggcctcatggatgagatgaaagcaaattgtgtgaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggatgttggtgacttc +aagatcaccataaacgagggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttt +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +agggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaagcttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaatttacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtattgctcccaatgcctgatgtcagaagcacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgacgatgttttcactgtctcatgtaggattcttactaggccctctcctgaatttgatttcacatactt +ggtgccaccaacagtggaatcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctccattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttgggcacaacccaactgcaagcatgtaacatttgttccat +acggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggaggttacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagtcaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtctcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattggtgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcagtcaact---------gttg +ttagcactt--------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG786781.1/1-7535 |Norovirus GII.4 strain Hu/GII.4/DBM15-156/2015/THA nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaatacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccttaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggattcaccaaagagaaaataggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccacatgactaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggtttcgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgagaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagaggggaaatgactatgtggtcataggggtccatacggccgct +gcccgtggagggaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggt +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aatctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgttagcagcagcactagaaatcatgg-ttaagttctctc +cagagccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctcttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggac +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgagggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttagaaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaagacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcagcatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgcccctgctcggggttcctac------------------ag +taagcctt-----------ctaat------------tcttccactgtcactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagctccccgt------------------c +aactgc---------------------------------------aaggattaggaactgggttgaagatca +aagtaggagtttgtcacccttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG601446.1/1-7571 |Norovirus GII isolate HNZZ0953, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaagcaccacaa +agg---------------------cctccacggccatccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagttagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccccctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggaaatctaccattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagtctcgccaaggttgaactagtaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaataggaagcccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaggcaaatgagctagctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctcaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaaaaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagctgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagactaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatagctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtttcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaagggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtgcccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +aggactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcaccctgctcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggcccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggaccaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +catatgcggaagaacgactgctggaacggggaatccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggcctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacattccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagagatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgtcctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +aataaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgaccccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctccttaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaggtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacgagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctgaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccagcaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctttggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attgggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatattttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggccaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcagtcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaatgggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatctga-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>MG601447.1/1-7556 |Norovirus GII isolate HNZZ0909, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------tatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcaaaaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaattctggaaatgtgggacggggagatctatcattatggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaaacccct +ccccaccatggatgactctaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatccgctgcttccaccttaagagcttgtaaagaccttggtgcatacgggctggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcactcacaggggaccagcgcgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +atggactgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggacacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgaaagactcaactttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaatccagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccatacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggagcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggagatcatccacggcaccactcccacctggtacctatgaaccagcttacctcggtggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtcctagaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatccctagacaagaccacttctagcggccatccgcac +cacatgcggaagaatgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatacggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccacacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggagggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagctggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccacgccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------agg-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgagtcagacttccagcaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagattgcctggtcccccaggaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctttggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttctgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaagccctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccagatccacacccagcagtgggtcttcagtaaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgaccca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------taggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------tct-taa--------------------attt-g--------at-ttaa-attggatctga-ttt- +--------------gga---atcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MH279823.1/1-7403 |Norovirus GII strain ST374 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacagtcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +tactagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaac--------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH279824.1/1-7365 |Norovirus GII strain ST322 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------tatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgtccccaaagggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccactgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcactcggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactttagacctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacctggccaagagtgtcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggatgcctacaggggagagagggtggttttatgggatgactatggcatgggaaaccctgtcaa +agatgccctaacgttgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacaaggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaycttcaaacatataactttgatgccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaarggtgtcaagaccttggaggatctgaaagttg +tactgagggacgtgaagttcaatgagtgtgagataatttacagaaactctaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagtgggtgcagcaa +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagtggcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaaaggcaacctgtgggcagacgacactaggagcgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagattcagatccataagtctggagagttctgcaggttcagatttccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccaccaggcacttatgagcctgcctacttggggggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgat +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggctaaacatgtgcagcctgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccgtgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgattat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gttatctcagtccaggagggcctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagcgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctatggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcgcgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggccctcctcggtgaggcttcactgcatggtcctcggttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtacccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcaccagg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgggtcatttgtcccgcatgtacaa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaaccgtggagtcaaagactaaaccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtct------gc----------------------------agactcaactg--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttgggatcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +aaatgattt---tgatgatggacaacctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggtg +agcgcattctcttcttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +atccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaatcccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaattaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaaaacaaccagttattcggg-ccagttttccagcaaccctatgca +ta-----------ggcaacccactttaccc---cgctctgaatc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctctgactg-------tggg--------gt +ctggctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttctac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtgcatgg---atggtgctctccaaacaacttatgtcacaccacaatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcc----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH279825.1/1-7525 |Norovirus GII strain ST90 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------------t---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH321825.1/1-7536 |Norovirus GII strain Hu/CHN/2017/GII.P16-GII.2/ZhouShan55, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatactagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggaaaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaagaaacaaagaaaggaagagagggccacattagggctagtaacaggctcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagatcaagcgtcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtatacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacattgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccgtcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccttgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagatcccaatgagactatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccatttaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcaggtt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgatcgctggc +ggcttttcccctactgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtactgggcaccaaactccatgaggaccacatcttattctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------atcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG571778.1/1-7468 |MAG: Norovirus GII.6 clone V4B RNA-dependent RNA polymerase (RdRp) and capsid protein VP1 (VP1) genes, complete cds; and capsid protein VP2 (VP2) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaga----tgctgggtgccgtccccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcctccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacatgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctaccgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctctattg +gagacccgtttacaccccca---actatttggtctgcccagacacgctgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctagaaccaccggcttcttcaaaccataccaatcttggaataggaaacccct +tccaaccgttgatgatggaaaaatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagaggcagtcatcctaatggcggagcttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattaaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctccttaaggataaggacagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggtgt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagaactggccgacacctgcccagtaactctaaattgtgataggattgagaacaa +ggggaagatgtttgacagtgacgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagggtcgattttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagatttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggatccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcgtggagactatgagagtgggcacagcgcttaggagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacaggaattccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttaacaaagttgaagaccagacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaggacctcgtttacactctaatac +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaagaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccggaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcacaagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctctatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtaga +accgtcggtggtcagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccatggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaagcttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggt +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccactcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctcttggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaggtggttgcagaggacctcctggcacccagccaactagatgtcggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatagcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggatcaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggccctcctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcacaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---tcccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---ggaacaccacagggaa +-----ca---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggcatcaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccccggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgttaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcagttctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcagggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaatgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacgtcctctt---------ctgcagcagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +at---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260478.1/1-7345 |Norovirus GII isolate STMB nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +-----------------------------------------------------------------caaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgaactcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctgtgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggtttttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaaactac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctca +ctaccggttctctgattgcccgcgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacatcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaagaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtccacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-cccgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaaakgctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaattgtcccctgacattatacaggcaaattccatgttc +tcattttatggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgcaggtgggatggatgtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggccatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +gaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatgtccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacgt---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cactcaaaaccggcct-tc--------gagtag---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggct-----cctcacatgg------cacagtttcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggagccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacccgcgt------------ttaacac----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260479.1/1-7494 |Norovirus GII isolate ST709 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcctccaccttaaagaaag----ccctcggggctaagcccaaacggcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccgccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctactatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattatttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcttacaggaattggctgacacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacagcattcagacaattggccgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacagg +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggacggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaacga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcacctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaaggaaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-gacacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttgactgccaagctg +aaggagtacggcctgaaaccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcagagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacacaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaaatgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccacccctttggaaaagttgttcacaggccccagcagtgcctttattgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gcgcactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgatactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------ccttctattgccacctctg----------------- +-------------tgc-----actcaaatca------aaccctttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260480.1/1-7493 |Norovirus GII isolate ST680 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcctccaccttaaagaaag----ccctcggggccaagcccaaacggcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccatcaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgattcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggtcaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcttacaggaattggctgacacgtgcccccttactttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacagcattcagacaattggccgcagagaacaagt +atggattggtggaaaccatgaaagttggcaaccaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatgatggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggacggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaacga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcacctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaaggaaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgagcagttaactgccaagctg +aaggagtacggcctgaagccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcagagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtgccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +caatcagacaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccacccctttggaaaagttgttcacaggccccagcagtgcctttattgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gcgcactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgatactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggtcatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatcagcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacgggaaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagc------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260481.1/1-7433 |Norovirus GII isolate ST545 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------g---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagatacggaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagrggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacagtcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacagcattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggacggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcagagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260482.1/1-7327 |Norovirus GII isolate ST480 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggaccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gaatgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccattga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaggacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +taacttcgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggccagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaacwccaaggtc +ccacaaccaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagatccccaagtcagaa-- +-gat-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtggaccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaaaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggcgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttccctcacat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgcctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccctacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtagctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaat-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260483.1/1-7536 |Norovirus GII isolate ST466 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggtccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacagtcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagttttcgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggacggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccaaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatggagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgctggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatcagcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260484.1/1-7536 |Norovirus GII isolate ST435 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggaccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gaatgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccattga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaggacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +taacttcgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggccagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagatccccaagtcagaa-- +-gat-------gatg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccgatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgcccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagcg +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtggaccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaaaaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacaaagggcagtgctagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttcccaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctatagtaaaatc +agtaaattggtcataactgaactcaaagaaggcgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttccctcacat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgcctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccctacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtagctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggatcctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260485.1/1-7524 |Norovirus GII isolate ST420 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacagtcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260486.1/1-7454 |Norovirus GII isolate ST347 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------------g---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggtccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggcctgaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacagtcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260487.1/1-7354 |Norovirus GII isolate ST342 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +---------------tatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggtttcaagaaaa----tgctgggtgccgtccctaaagggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgargac------gccgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccactgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcactcggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactttagacctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacctggccaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggatgcctacaggggagagagggtggttttatgggatgactatggcatgggaaaccctgtcaa +agatgccctaacgttgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacaaggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgatgccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaggatctgaaagttg +cactgagggacgtgaagttcaatgagtgtgagataatttacagaaactctaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagtgggtgcagcaa +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagttgcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaaaggcaacctgtgggcagacgacactaggagcgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagattcagatccataagtctggagagttctgcaggttcagatttccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccaccaggcacttatgagcctgcctacttggggggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgat +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggctaaacatgtgcagcctgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccgtgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgattat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gttatctcagtccaggagggcctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagcgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctatggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtacccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcaccagg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgggtcatttgtcccgcatgtacaa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaaccgtggagtcaaagactaaaccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtct------gc----------------------------agactcaactg--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttgggatcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +aaatgattt---tgatgatggacaacctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggtg +agcgcattctcttcttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +atccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaatcccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaattaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaaaacaaccagttattcggg-ccagttttccagcaaccctatgca +ta-----------ggcaacccactttaccc---cgttctgcacc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctctgactg-------tggg--------gt +ctggctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-c---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260488.1/1-7536 |Norovirus GII isolate ST305 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccgcattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggccgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaagaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgtccaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260489.1/1-7476 |Norovirus GII isolate ST295 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcgggggctacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcagacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccataggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttacagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctctt----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260490.1/1-7559 |Norovirus GII isolate ST283 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgtcgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaagttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccacctacaatttcgaccggaacagaatcacaacattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------tttccttttt-----c-tt-------------ttctt- +-------------tagt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>MH260491.1/1-7495 |Norovirus GII isolate ST256 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +-------------------------------------------------cttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcatgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctctagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260492.1/1-7536 |Norovirus GII isolate ST254 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcatgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagtcgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctctagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260493.1/1-7513 |Norovirus GII isolate ST251 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgaga----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccattatggcctgtacgtagagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggagaatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattaattgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatattcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaatggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagcccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaagtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgccccttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccttacatctataaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagtgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaggggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tgcagtcaaccaaccagcca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggagtggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------t +cacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-g-a-------------------------------------------tt-------------tattta +g-gat------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH260494.1/1-7498 |Norovirus GII isolate ST173 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +--------------------------------------------cgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagccc-cccccgagggaaacatcacaa +agg---------------------cctccacgaccacccaccccagaactggtg-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtccggcaacc +ggatgaggccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatataccattacggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactggcaccactctctctattttg +gaggccagtgtacacaccac---agtacctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctatacagcttttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgattcagagaacaactggcttcttcagaccttaccaagagtggaataggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcactaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaatcacatgactgccctcctcaaagacaaagacagtctggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaagacctgttgttgttatgatatcaggtaagccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccattgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgttggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcactagcaaggatggatgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaaaaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgatgtgacaggcatgatcttggaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +accgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagcatggacctgggcaccacacca +ggtgactgtggttgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagccgcc +gcccgcggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggcggcaaggatccc +agagtcaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgataagaccacttctagcggtcatccgcac +catatgcggaagaacgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttccaaagcc +aacctgatgtttgaggagggaaagaacatgacaccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagagacttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacactgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactctagatataaatatcattatgatgctgactac +t-ctcggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaattatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtaggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcactctccgaagttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattagacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgtgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcgatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgttgactagacctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatttctgaaatgtctaa +ttctagg---tttccagtgccgattgattccctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtcttcggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgatcaaaatcaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggcaaagctgcacaa +attaggcttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccgagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgtacagaactacaccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgagtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260495.1/1-7493 |Norovirus GII isolate ST166 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgagg-------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260496.1/1-7449 |Norovirus GII isolate ST165 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +-----------------------------------taccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaagcactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgcctttaaaccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactgggtcaaatgctaaagggatggatttggggacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaaatgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaagacacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +tagtcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaaccttaggg--------------atac---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctctt----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260497.1/1-7433 |Norovirus GII isolate ST161 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacaacattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgcgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttattgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgg------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260498.1/1-7509 |Norovirus GII isolate ST156 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggt------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260499.1/1-7481 |Norovirus GII isolate ST155 nonstructural polyprotein (ORF1) and VP1 (ORF2) genes, complete cds; and VP2 (ORF3) gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +cct-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggtgcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggtgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggataactccaagattaagaaggtggcagatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtccctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaactggt +catgaaatggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +attagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaatcgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggacgaatttgaactccaaggtc +ccacaatcaccaccttcaacttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtaaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaattcccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacaccgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaactgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaagttggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaagtaccattatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccccgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaagggcggtgactcgtgacccagctggctggtttggaaaattggaccaaaactca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacaatatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +gaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggaaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccataaagctacagt +gtacactgggagcgccgactttgctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggcagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttactggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260500.1/1-7519 |Norovirus GII isolate ST152 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacggcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattgaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagagcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaagtc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagtctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattg------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH260501.1/1-7490 |Norovirus GII isolate ST136 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacggcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattgaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagagcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaagtc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------ga---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260502.1/1-7536 |Norovirus GII isolate ST134 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggacggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagattggaacagaaaacccct +gcctaccatggatgactccaaaataaagaaggtagcaaatatattcctatgttcattgtccacattgtttac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggaggggttggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcgatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaggaattggctgatacgtgcccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctactggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccgaatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggtcggggccc +tgcaccacctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agaccaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaagagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctggtgacaggttcagaaa +tcagaaaaagaaaccccgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccgtcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgttctcgaacaaaccctggac +cctccgcaaaagtggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtatgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaactgccaagctg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcaccttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagttca +atcttgaggcaaatgtactggactagaggaccaaatcatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctatagtagaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggttactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataacttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacggttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacaggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactttcttctgtcaacgtctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatttggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctccagatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accatcgagggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgcacggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260503.1/1-7300 |Norovirus GII isolate ST114 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------gaagaagaagaggaaccagtcatt +aggtatgggg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgcccttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactgggtcaaatgctaaagggatggatttggggacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaagacacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260504.1/1-7516 |Norovirus GII isolate ST111 nonstructural polyprotein (ORF1), VP1 (ORF2), and VP2 (ORF3) genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagtcatt +aggtatgggg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgcctttaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactgggtcaaatgctaaagggatggatttggggacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaagacacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gt---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260505.1/1-7191 |Norovirus GII isolate ST110 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagtcatt +aggtatgggg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactgggtcaaatgctaaagggatggatttggggacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaagacacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaat------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttg------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260506.1/1-7542 |Norovirus GII isolate ST109 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaggaaccagtcatt +aggtatgggg----------ttaa---aagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacgacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcatagggaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagaccttgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggatgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaactggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaaaccacaatt---agatcaaaatga--------atcagagactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgtcgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactgggtcaaatgctaaagggatggatttggggacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaagacacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaagaacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttc--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260508.1/1-7550 |Norovirus GII isolate ST103 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaggaagaagaggaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcgatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctttcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatactgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgagctcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagagaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaagtctgcatcccctgacatagt +tgggacaatcaacgccctattggctcggatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaactgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaatcttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcactaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagagatgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgttcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcacgtgatccccgcaggcgtaacagaagcgttt +ggagtccccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgtccctacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaatccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacgaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtggtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccttgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaagctggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccccttagggctaataatgc +tggggatgatgttttcacagtttcgtgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctatcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttattcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +tcctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttatcaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatctggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgtag---------tataatggctggagctctctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttccactgccacctctg----------------- +-------------tgc-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgt---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttatcacctttcatga---ggggggcccacaatatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MH260509.1/1-7457 |Norovirus GII isolate ST97 nonstructural polyprotein (ORF1) gene, partial cds; and VP1 (ORF2) and VP2 (ORF3) genes, complete cds +------------------------------------------------------------------------ +----------------------------------ggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgaga----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccattatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgctcattgtccacattattcac +cagacccataaaagacctcgtaggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttaaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaaaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagcgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggatgccttcaagtccgacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagtcggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaagtgccggatcctctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactacgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagaggaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaagaggagaccaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggctgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtaacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggggagctcatgccccttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccttacatctataaaagaggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccactatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaagagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +tccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------ttcaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggcta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-g-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>MH260510.1/1-7193 |Norovirus GII isolate ST287 nonstructural polyprotein (ORF1) gene, partial cds; VP1 (ORF2) gene, complete cds; and VP2 (ORF3) gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------a----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccactgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctagtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcactcggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaactcttc---ggcatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtgcccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactttagacctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacctggccaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggatgcctacaggggagagagggtggttttatgggatgactatggcatgggaaaccctgtcaa +agatgccctaacgttgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacaaggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgatgccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaggatctgaaagctg +cactgagggacgtgaagttcaatgagtgtgagataatttacagaaactctaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagtgggtgcagcaa +tccttaggctcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgagtccga-----aaagg +aagtggcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaaaggcaacctgtgggcagacgacactaggagcgtggact +acaacgagaggcttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagatccagatccataagtctggagagttctgcaggttcagatttccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgcggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcctgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccaccaggcacttatgagcctgcctacttggggggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgat +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggctaaacatgtgcagcctgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccgtgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgattat +t-ccaggtgggactcaacccagcaaaggaacattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gttatctcagtccaggagggcctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagcgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctatggtgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaagctc +agagagtatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggccctcctcggtgaggcttcactgcatggtcctcagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtacccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcaccagg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgggtcatttgtcccgcatgtacaa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaaccgtggagtcaaagactaaaccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagtcag--------- +----------acgtcgaggtct------gc----------------------------agactcaactg--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttgggatcgctagccaaa---gaaacaccacagggag +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +aaatgattt---tgatgatggacaacctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggtg +agcgcattctcttcttcaggtcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctatcaggaggccgctccatcaca +atccgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaatcccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaattaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaaaacaaccagttattcggg-ccagttttccagcaaccctatgca +ta-----------ggcaacccactttaccc---cgttctgcacc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctctgactg-------tggg--------gt +ctggctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccaa-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---a------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218570.1/1-7563 |Norovirus GII isolate NORO_100_30_06_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>MH218571.1/1-7555 |Norovirus GII isolate NORO_101_30_06_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaaccagacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtacgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +gattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgtttg---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agtcc---------aataatggcaggagctttcttagctggattggcaggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MH218572.1/1-7548 |Norovirus GII isolate NORO_102_02_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagatatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218573.1/1-7548 |Norovirus GII isolate NORO_103-1_07_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaataacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaataaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagataaaaccattttcactccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggacaccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcacccctaaactaggctcattagagatttcc------------actgagtc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgaccg------------tgaggcagactttcaacaatgggctcttcccaa +ctatgctggccag-ttcacc------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacctcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtacacagacccacaccaaat---------------------------------t +ttaaaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaagtcac--tagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaactcgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218574.1/1-7548 |Norovirus GII isolate NORO_104_07_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagatatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgacggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccagccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gtaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaggaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218575.1/1-7548 |Norovirus GII isolate NORO_105_05_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattacggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcgtggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ctcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcagccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaagaattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaacttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagtcgagagggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagactctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctgcaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagacgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacgactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccccggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataattaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagttaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgtgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacggacttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccagggggccaaatcatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaacccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgtaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctagttgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagcaccaattgattccctacacactagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatgcagcaacccctagattgttta---- +-------atcatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacgact--------agg-----------gcacatgaagcaaaggt +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgcccccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaattacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgagtcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggagcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttagaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaactcaaaccac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218576.1/1-7548 |Norovirus GII isolate NORO_106_10_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagatgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacagaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttc +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacactcgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218577.1/1-7548 |Norovirus GII isolate NORO_107_11_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagatgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacagaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttc +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacactcgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218578.1/1-7548 |Norovirus GII isolate NORO_108_17_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattgtctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagagtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgagaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaagactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattttacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtgatcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctagttgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatc----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaaaacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tggtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaacactttcaacaatggaccctacccga +ctacgctggtcag-atcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacacaa +acaaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccccactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagacactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------taggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218579.1/1-7548 |Norovirus GII isolate NORO_109_18_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgagaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaaaggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaagactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcaaatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattttacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctagttgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatc----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tggtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaacactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacacaa +acaaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------cagaca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218580.1/1-7548 |Norovirus GII isolate NORO_110_06_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaaggccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggcgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctatcaggattggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaatatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcgaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgcgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacctgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccggttccctcgttgcccgagcatcagggctcctccacgagagattggacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-agt----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacggccttttccggcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggatcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccagggcgcgcaggagttctat +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacaggtatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggctgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gcgcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaaa +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacggagggacccttaattgtctctgaagatttgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcggaactgaaagagggtggaatggatttctacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtacaagcacctggtggtgaatttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtctttactgtgtcttgtagagtgctaactagacctagtcctgatttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgtttg---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagacttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcagcaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctaacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaaat +gcgcaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctctcctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacttcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagtcatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctgggtctcttaggacagcttttgtcactccaccatctagtac +ggcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218581.1/1-7548 |Norovirus GII isolate NORO_111_05_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccttt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctaacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttccgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaacgccttactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccccgtcca +cgacgccctcagactccaggagctcgctgacacttgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaagcccgacttctcacacataaaattgg +cattagccccacaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaggaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttatcgtctcctctgatgacatcaaagctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgctaagaagactataatcaatgtgcttgagcaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcattagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaagcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +agggtatcaatcaacgagggattaccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccatatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatatagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattggagatatct------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgatggctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcggtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagttcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218582.1/1-7548 |Norovirus GII isolate NORO_112_08_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----cccttggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccttt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttccgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaacgccttactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccccgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaagcccgacttctcacacataaaattgg +cattagccccacaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaggaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttatcgtctcctctgatgacatcaaagctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgctaagaagactataatcaatgtgcttgagcaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcattagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaagcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +agggtatcaatcaacgagggattaccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcccgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatatagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattggagatatct------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcggtgaggtcg +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagttcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218583.1/1-7548 |Norovirus GII isolate NORO_113_04_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaggtgaaaaaggtggccaatgttgtcctatgtactctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagatttcctcgtctatgctgacgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgccagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcagatgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgctggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttcttatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgagaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggcggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcat +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaatcatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgagacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctagttgcaatgctatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagataaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagtaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatccttcagaagacataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacagctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tggtgattt---tgaacaaaaccaaccaacaa---------------------------gattcaccccag- +--------tcggcattggagttgaccg------------tgaggcagactttcaacaatggaccctacccaa +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacacaa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgaatttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagacactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +agatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218584.1/1-7548 |Norovirus GII isolate NORO_114_14_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacggtggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctgaacgtcctcaacatactagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacaactctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaaaaacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgtatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaacatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacattatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaacaaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccattttcactccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggacaccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacaact--------agg-----------gcacatgaagcaaagat +agacacaacagctggccgtttcacccctaaactaggctcattagagatttcc------------actgagtc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgaccg------------tgaggcagactttcaacaatgggctcttcccaa +ctatgctggccag-ttcacc------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctattaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacctcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtacacagacccacaccaaat---------------------------------t +ttaaaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaagtcac--tagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcca--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218585.1/1-7548 |Norovirus GII isolate NORO_115_17_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +agcgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcacgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaataacatcacagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaagggctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaaaaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaatgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaataaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttctaaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagatgaaaccattttcactccctgttctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccccagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggacaccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacaact--------agg-----------gcacacgaagcaaagat +agacacaacatctggccgtttcaccccaaaactaggctcattagagatttcc------------actgagtc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtgttggggttgaccg------------tgaggcagactttcaacaatgggctcttcccga +ctatgctggtcag-ttcacc------cacaatatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttattcgaggccaagttgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------tcgtgcacaggtccacaccaaat---------------------------------t +ttaaaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaagtcac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaatctcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218586.1/1-7548 |Norovirus GII isolate NORO_116_26_09_2014, complete genome +----gtgaatgaagat---ggcgtctaat-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagatgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaagaacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcaccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaataacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccacctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +aaagaatcagagaagagaggaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcagaaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgaacccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgttgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaacaaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggttatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgttgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccattttcactccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacaact--------agg-----------gcacatgaagcaaagat +agacacaacagctggccgtttcacccctaaactaggctcattagagatttcc------------actgagtc +tgatgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgaccg------------tgaggcagactttcaacaatgggctcttcccaa +ctatgctggccag-ttcacc------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgccttgtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacgacctcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaagtcac--tagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218587.1/1-7548 |Norovirus GII isolate NORO_117_01_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaaggccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------acccccacccaacgg------ggaagatgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttgtacgtagaacgagggttagt +gctcggcgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctatcaggattggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacatcattgggaagttaaaacccctaaacattctcaatatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcgaagaagatcgcctccacactcacgggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgcgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacctgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccggttccctcgttgcccgagcatcagggctcctccacgagagattggacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcagaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-agt----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacggccttttccggcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgtcgact +acaatgagaaacttagtttcgaggctccaccaagtatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccagggcgcgcaggagttctat +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacaggtatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgccaccatgagaattcagggtcgc +actgttggtggacagatgggtatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggctgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gcgcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagactacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaaa +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagatccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacggagggacccttaattgtctctgaagatttgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgcttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcggaactgaaagagggtggaatggatttctacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtacaagcacctggtggtgaatttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtctttactgtgtcttgtagagtgctaactagacctagtcctgatttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcactagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagacttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcagcaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctaacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaaat +gcgcaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctctcctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacttcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagtcatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctgggtctcttaggacagcttttgtcactccaccatctagtac +ggcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218588.1/1-7548 |Norovirus GII isolate NORO_118_17_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgcagctgcc------------aaaagc +a------gc----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccttt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttctcctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttccgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccttactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccccgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgagacttcccaggccaaccagacatgtggaaagacaccttcaagcccgacttctcacacataaaattgg +cattagccccacaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggtc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaggaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttatcgtctcctctgatgacatcaaagctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgctaagaagactataatcaatgtgcttgagcaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcattagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaagcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +agggtatcaatcaacgagggattaccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgtgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgctatacacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgacttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatatagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattggagatatct------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----acca---------- +--acgggattctagactgcctggtcccccaagaatggatacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +ag-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcggtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagttcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218589.1/1-7548 |Norovirus GII isolate NORO_119_27_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggccgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaggtgaaaaaggtggccaatgttgtcctatgtactctctcatcattgttcac +aagaccaattaaggacattattgggaagctaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttataatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgacgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgccagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcagatgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgctggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccacggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgagaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggcggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcat +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattactcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaatcatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgagacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taatcaagggtctgat---tcgaggttacgcctagttgcaatgctatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagataaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgagggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttcttaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagtgacccctagattgttta---- +-------atcatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatccttcagaagacataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctagccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgacgaaaaccaaccaacaa---------------------------gattcaccccag- +--------tcggcattggagttgaccg------------tgaggcagactttcaacaatggaccctacccaa +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacacaa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacagttgaatttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccatacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +agatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218590.1/1-7548 |Norovirus GII isolate NORO_120_28_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccttt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggcgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgctcccttactgggtaattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctgctgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaactggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccccgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caacttcgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattagccccgcaaggaggttttgacaagaatggcaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagaggttagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaggaacatctcagtaaaaaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaagcctctggt +ccaaaccacaagtagaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcgactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagcttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaagccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgctaagaaaactataatcaatgtgcttgagcaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcattagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaagggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggggctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagcactggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactagaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatctcgctagaatgtataa +tggttatgcaggtggatttgaggtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgacgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaaatcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatgtct------------actgaatc +tagtgactt---tgaccaaaaccaaccaacga---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatacgttaaccctgacactggtagagtgttgtttgaggccaagttacacaa +attaggtttcatgactatagccaaaaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgagtcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgttattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaacgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcggtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218591.1/1-7535 |Norovirus GII isolate NORO_121_30_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctcaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcctccacctaatggc---gaagaagaagagccagccatt +aggttcgagg----------ttaa---tagtggaatctctggtctacctgagctcacgacagttgtccaacc +ggatgcgaccaatacggcattcagtgttccaccgctgagcttgagagaaaacagagaggccaaggaaccgct +gactggagcaatattagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcttggt +gttgggtgtgcacaaaccacctgcagctataagtatggcaaaggtggaaatgacaccgctgtcattatactg +gcgtgttgtgtacacccctc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgttacgccttttgctgctgggtgttagatctcaatgactcgtggct +cag---caggaggatggtgcaaagaacaacaggtttcttcagaccttaccaggagtggaacagaaaaccttt +acccaccatggatgactcaaaaatcaagaaagtggcaaacattttcttatgttcattgtccacactattcac +cagacctataaaagacatcataggaaaaatcaaaccactaaatatcttgaacattctggcaacgtgtgactg +gacgttcgccggaatcgtggagtctctaatactgcttgccgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttactcggtgaatacgagctgcaagggcctgaggatatcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgctagggtttaccaaagagaagattggcaaaatgct +atcctcagcagcatcaacgctcagggcttgcaaagatcttggtgcttatggtttagagatactcaaactggt +catgaaatggtttttcccaaagaaagaagaggccagtgaattagccatggtgagggcaatagaggatgctgt +actggatcttgaagcaatagaaaacaaccacatgacaactttgctgaaagataaagacagccttgcaactta +catgaaaacactagacctagaggaagaaaaagccaggaagttgtccacaaaatctgcatctcctgacatagt +tggaacaatcaatgccctgctggcccgaatagcagcggctagatcattagtccacagagccaaagaggagct +atctagcaggatcaggccagttgttgttatgatttctggcaagccagggataggcaagacccacttagccag +ggaggtggcgaaaaaggtggcatccactctcacgggagatcaaagagttggactcataccaagaaatggtgt +agaccattgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagtaatcccatcca +tgatgctctgcgcatacaggaattggctgacacatgtcccctcaccctaaattgtgatagaattgaaaataa +gggaaaagtttttgatagtgatgtcataataatcacaacaaaccttgccaacccagctccccttgactatgt +taactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcaccagaagtggaaaaggcaa +aacgggatttccctggtcagccagatatgtggaaggatgctttcaaagcagatttttctcatatcaagttac +aacttgcgccgcagggtggttttgacaagaatggcaacaccccgcatggtaaaggagtgatgaagaccctca +ccactggttccctgattgcccgtgcgtcaggtttactgcatgagagaatggatgaatttgaactccagggcc +ccacagtcaccacttttaacttcgaccgaaacagaatcaccgcctttagacaattggctgcagagaacaagt +atgggctggtggacaccatgagagttggcaaccaactgaaaggggtgaaaactatggaagaactcaagcagg +caatcaagaatgtgtccattaagaggtgccagatcatctataatggctccacgtttgaccttgagtctgatg +gcaagggcaaggttttagtggagaaggtcaaaagcacctccgttcagaccaacaacgagctagccggagctc +tacaccacctcagaagtgcccgaatcaggtattatgtcaaatgtatacaagaagctgtctactccatcttac +aaattgccggcgctgcgttcgtcaccacacgtattgcgcgccgcatga------acatacaggaactctggt +caaggccaccatt---agaccaaagtga--------gccagagactaaagaagagacccccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagaaatcaaggaggaagggaagaagggcaaaaaca +agactggccgtggcaagaaacatactgcattctcgagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaacggaaagtactctatagaggaatatcttcaagacagagacaggtac---t +atgaggaactcgccattgccaaggccacggaagaagacttctgcgaggaagaagaaattaaaatccgccaga +ggatcttccgccccaccagaaaacaaagaaaggaagaaagagccacgctagggctagtgactggttcagaga +tcagaaagagaaatcctgatgacttcaaacctaaagggaagttgtgggctgacgacaacagaagtgttgact +acaatgaaaagttggactttgaggcccccccaagtatatggtccaggattgtgagctttggttccggttggg +gcttctgggtgtcac-caagtctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacggggatgatcctggaagagggtgcgccagaaggcactgtggcaaccgtgctgatcaag +cgccccaccggagagctcatgcccctcgcagccagaatgggaacacacgcgaccatgagaattcagggccgc +atggttggcgggcaaatgggcatgctgctcactggttcaaatgctaagggtatggatttgggaacaactccc +ggtgactgtggctgcccgtacatctacaaaaggggcaatgattatatagtcattggagtgcacacagcagca +gcccgtggtggaaacactgtcatttgcgccacacagggaagtgagggtgaggcgactctcgagggcggagat +gacaaaggaacatactgcggggcacccatcctgggccccggaggagcaccaaaattgagcaccaagaccaag +ttttggaggtcatcgaatacgcccctcccaccagggacgtatgaacctgcctatcttggtggtcgtgatccg +cgtgtgaagggtgggccctccttgcaacaagttatgagagatcaattgaagcccttcactgagcccaggggt +aaacctccaagacctagtgtgctggaggcagctaaacaaaccatcatcaacgtcctcgagcaaactctagat +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccac +cacgcccgaaagaatgagttctggaatggtgagacctttattggcaagttggcagaccaggcatcaaaagca +aacctgatgtatgaggaagggaaacacatgacaccagtatacacagcagccctcaaggacgagctggttaaa +actgacaaaatctatggaaagatcaagaagaggctgctttggggctctgacttgtccacaatggtccgatgt +gctagggcctttggtgggcttatggaagagatgaaggcacattgcatatcactcccagtccgagtaggtatg +aacatgaatgaggatggcccaataatatttgagaagcactccaggtataagtaccattatgatgcagattac +t-cccgttgggattcaacacaacaaagagctgttctggcagctgctttggaaataatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaagatctgctggcccctagtgtagtagatgtgggagatttc +aaaatctcaataaatgaggggcttccttctggtgtaccatgcacttcccagtggaactctatcacacattgg +ctgttaactctctgtgctctgtctgaagtcactaacctgtcccctgacatcgtgcaggcaaattccatgttc +tcattttacggtgatgatgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +aaggaatatggtctgaaaccaacccgcccagacaaaactgagggaccactgattatcagcgaggatctggac +gggctcaccttcctccgaagaacagtttcccgtgacccagctggctggttcggaaagttggatcaaagctca +atactgaggcaaatgtactggaccagaggaccaaaccatgaagaccccagtgaaacaatgatacctcactct +caaagacccatacagctcatggcactgcttggtgaggcttccctccatggaccatctttctacagcaaaatt +agcaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccgaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagagatcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatctatctagaatgtacaa +tgggtacgctggtggcgtagaagttcaagtcctcctcgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgttccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +gatagttgatgttagaacccttgaacccatcatgataccactccctgatgtcaggaacaccttctttcatta +caataatcaacctgcc---aatcgcatgcgattggtagccatgttgtacacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagtttacatattt +ggtccccccttcggtagagtctaagactaagcccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtagattcattgttcacagcccaaaacaataatcttaatgtccagtgtca +aaatggtcgctgcactttagatggtgagttgcaaggaaccactcagttgcaaccatcaggcatctgcgcctt +cagag-----------------------------------------gcaaaataacggcag----------- +-----------atgtacg------------------------------------------------tc---- +-------caagcc----------------------------------acgatgac----------------- +-------aggtggcatatgcaactgacaaatctcaatggaacccccttcgacccaacagaggatgtaccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tc-----caacctaacccaaacaccacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta---------gc---acaag +tgaagattt---cattgtgggccagcccacaa---------------------------aattcacaccag- +--------ttggcatc------aagattgaggatgggcat------gcatttgaccaatggaccctacctag +gtattcaggccat-ttaact------ctcaatatgaaccttgccccacctgttgccccaaatttccctggtg +aacaactactcttctttaggtcaaatgtcccc------tgtgctggcggcat------tagtg--------- +--atggtgtcatcgactgcctgctgcctcaggagtggatacagcacttctaccaagagtctgctccctccca +gtccgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggttacatcactgttgctcattcaggtgattatccccttgttgtcccctccaatggatactttagatt +tgattcttgggtgaaccaattttattcacttgcccccatgggaactgggaatgggcgcaga---------cg +ggtgc---------agtaatggctggagctttcatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcattggcaaacgccgg---ggccaatgccatcacacaaaagatagactttgaaaacaacaaacagctc +caatctg---------------------------------cctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgatatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccctactgatgcggcgagaggagcagtgggtgcacccatgaccaaggtcctcgactggtctggt +actcgttactgggctccaaattccacgaggacaacaggttactcagggcagttcacatcagca--------- +cc---------------------agtgcacatgcccacaaaaaccattcagcctactcc-----------tg +ttaaaag----------------gactcaacctctttct-tc--------ctcttc---------------- +------------------------------aggtagtgtctatagtcttcca------------------ac +acagagca-----------ccgcc------------ttgactaagccctcttcag----------------- +----gtccttctgttt-----cttctgcttc------tacacaatctac----------aaa--------at +tgagttcag--------------------------------------tttctt------------------c +aatgga---------------------------------------tagaacagcaaattgggtaaatcagca +aa---gaagccttagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaattaat----- +--ta-g-ttt-taat-----ta----ga-----------------------tt-------------ttgttt +g-aatttaa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218592.1/1-7541 |Norovirus GII isolate NORO_122_01_12_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagtgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggagaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaagttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +tccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagacttcaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgatagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacagcgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggatagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcggggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatctggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgcccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctgggaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactacaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaaatgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +catatgcggaagaacgactgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaatgccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtaatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttatgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctctacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218593.1/1-7548 |Norovirus GII isolate NORO_123_02_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagtgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggagaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agcacctcatttcccctgacactctcagaaagttgcatggggagacgtt +tccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatggattggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagccctactcaaggataaagataaccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcactctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgatagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ttcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacagtgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggatagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcggggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgtccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgcccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactacaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaaatgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtaatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaaatagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgtttaattgcaatgttatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatttgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacaacaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgacca------------agaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctctacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218594.1/1-7548 |Norovirus GII isolate NORO_124_10_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcacggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattagcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +aaactttgaagcttg-ctcgaggcgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtacttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgccagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacgactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactacaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaagcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggtaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagttaacctcccgatgcctgacgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatacacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacgaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatttgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcccccaaatggatattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacgtgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggt +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcttagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagtctttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaga--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ctt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218595.1/1-7548 |Norovirus GII isolate NORO_125_19_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaattatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaagacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgtcgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cactcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaagtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaaaatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agaggatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaagaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagagga +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagatctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggattcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattctctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccaatgaccaggccgatacagcaacccctagattctttg---- +-------atcatt----------------------------------cttggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcgcatgaagcaaagat +agacacctcatctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaacataaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttaaacagtggaccctacccaa +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218596.1/1-7548 |Norovirus GII isolate NORO_126_17_02_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaattatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctaatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttttaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagattagacgattatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cactcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaagtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaggatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcaggccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggcgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggtacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggttaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtaggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcagactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagcaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccaatgaccaggccgatacagcaacccctagattctttg---- +-------atcatt----------------------------------cttggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacgact--------agg-----------gcgcatgaagcaaagat +agacaccacatctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaacaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttaaacaatggaccctacccaa +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagtctgagctcacactcatccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218597.1/1-7548 |Norovirus GII isolate NORO_127_05_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggctttttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacatcattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagctttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattagt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +tatgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgctctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacagcgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctccgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacacatgtcattccccaaggcgcgcaggagttcttt +ggagtgtccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggtacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggggctctgaaagatgagctagtcaag +actgacaaaatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctagaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcactctatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tctttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatatgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaattttct +tgtgccacctactgtggagtcaaagacaaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgtgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgatca------------tgaggcagactttcaacaatggaccctacccga +ttatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--aagggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggctagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ctgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgttcgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccgccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218598.1/1-7548 |Norovirus GII isolate NORO_127-3_24_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtactttctaatat +ggccgtctctcttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaagggcaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaagcgaactggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatataacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaaactga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggcttctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacggaacttaagcagg +ctctcaataacatcaaagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaaacacacagccttttccagcaaagggctcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgatt +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccgactcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaatgctaagaatatggacctgggcacaactcct +ggcgattgtggctgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgctgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgcctcccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagagaactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggcaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-ctcgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtaatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtaacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactagacccagagaaactaacaataaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcattgcatggtccatcgttctacagcaaaatc +agtaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgaatttacagtgtcccctagaaattcccctgg +tgaagttcttctaaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---ccgagattgcgcctaattgcaatgctgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaaggtaaaatcattttcactccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccccagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacaact--------agg-----------gcacatgaagcaaagat +agacacaaaatctggccgtttcgccccaaaactaggttcattagagatttcc------------actgagtc +tggtgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtgttggggttgacca------------tgaggcagactttcaacaatgggctctccccga +ctatgctggtcag-ttcacc------cacaatatgcacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctctagtggccctggttaggtatgtcaaccctgacactggcagagtgttattcgaggccaagttgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gaatc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgtttcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------tcgtgcacaggtccacaccaaat---------------------------------c +ttaaaac----------------aggccaggctcccaaacccgcacccagcagtgggtcttcagtgaagtca +aattcaacccaagtcac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +cactaa---------------------------------------caggactagggactgggtcaaccaaca +aaatctcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218599.1/1-7548 |Norovirus GII isolate NORO_128_07_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagtgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggagaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaagttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +tccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagacttcaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgatagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaataagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacagcgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggatagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcggggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatctggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgcccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctgggaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactacaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaaatgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagatcttttgtcccccagtgtaatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctctcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttatgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcatttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgtaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggtcagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctctacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218600.1/1-7548 |Norovirus GII isolate NORO_129_16_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgaactctcaactgtcacccaact +ggaagagaactctacagcattcagtgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggagaaatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaagttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +tccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgcgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagacttcaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgatagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggtaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aattaacagcgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggatagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcggggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatctggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgccccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgcccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctgggaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactacaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaaatgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtaatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaattgatgtcattacttggtgaagctgcattgcacggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttatgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaatttcccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttctctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcaatgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgaccg------------tgaggcagactttgaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctctacaacctcgatgtcgggtggctttaca-catca--------- +at-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +gactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatattttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218601.1/1-7548 |Norovirus GII isolate NORO_130_25_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------at----agcgacaacgcaaaatcttcaggtgacg---------------gagtgttatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcgattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaccaatcata +tcttacaacg----------tcaa---agggggtgtttctggtttgcccgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtccttgtattg +gagaccagtatacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggagagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattatcgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcctcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagccgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgccctctcacactcaactgtgacaggattgagaacaa +aggtaaggtttttgacagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagactttctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtggaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaagtat---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctctc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacgactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggactctttcacaggaaaattggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +aggatatcaatcaacgagggattaccctctggtgttccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggggccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgttatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +taggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----cc------------ctgatgccacaact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcggccccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcgtttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagacactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatca-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218602.1/1-7548 |Norovirus GII isolate NORO_131_08_04_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccatccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaattatt +tcttacagcg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgccaagattgagctgacccccttgtccttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaagtcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cactcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaagtgtgctagaatcaggtactatgttaagtgtgttcaggaagccctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacggggtctaacgctaagagcatggatttgggtacaactcct +ggcgactgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaacgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcgaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagatctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcagactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaacattgttgttcagtgcca +aaatgggcgcgtcacccttgacggtgagctgatgggcaccacccaactcttgcccagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccaatgaccaggccgatacagcaacccctagacactttg---- +-------atcttt----------------------------------cttggcat----------------- +----------------atacaattggataatctaaatggaaccccttacgatcctgcagaagacataccagg +ccccctagggacaccagatttccatggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcgcatgaagcaaagat +agacaccacatctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaacaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttagacaatggaccctacccaa +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctatcaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgcaattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218603.1/1-7548 |Norovirus GII isolate NORO_132_01_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccatca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgtcccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgacttgaacgactcatggct +gag---cagaaggatgatacaaaggacaactggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaagcgaactggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggcttctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacggaacttaagcagg +ctctcaataacatcaaagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaagtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaaacacacagccttttccagcaaagggctcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagtgttgatt +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccgactcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaatgctaagaatatggacctgggcacaactcct +ggcgattgtggctgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgctgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgcctcccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggagaccttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtaacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactagacccagagaaactaacaataaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcattgcatggtccatcgttctacagcaaaatc +agtaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttctaaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaaggtaaaatcattttcactccctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccccagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcgccccaaaactaggttcattagagatttcc------------actgagtc +tggtgattt---tgatcaaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggtgttggggttgacca------------tgaggcagactttcaacaatgggctctccccga +ctatgctggtcag-ttcacc------cacaatatgcacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcga-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctctagtggccctggttaggtatgtcaaccctgacactggcagagtgttattcgaggccaagttgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +aaatc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +ggatctttagttagtgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------tcgtgcacaggtccacaccaaat---------------------------------c +ttaaaac----------------aggccaggctcccaaacccgcacccagcagtgggtcttcagtgaagtca +aattcaacccaagtcac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaatttcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218604.1/1-7548 |Norovirus GII isolate NORO_133_26_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgcagctgcc------------aaaagc +a------gc----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccgcccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccttt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacttt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtagccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agacgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttccgctgcttcaaccctgagagcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactctccaccaagtctgcctctccggatattgt +gggcacgataaatgccttactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagtagaccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagtagccccgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgagacttcccaggccaaccagacatgtggaaagacaccttcaagcccgacttctcacacataaaattgg +cattagccccacaaggaggttttgacaagaatggtaacactcctcatgggaagggagttatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggtc +caactcccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaggaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagtagaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttatcgtctcctctgatgacatcaaagctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttctaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgctaagaagactataatcaatgtgcttgagcaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcattagataagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaacggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaagcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +agggtatcaatcaacgagggattaccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgagatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggctcaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgtgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccacctcgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcaagattacgcttaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttaccgtgtcttgtagagtgctaactagacctagtcctgacttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaagccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattggagatatct------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacaa------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaatatgaacctagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagctccctctca +gtctcaagtggctctggttagatatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---agctaatgttattaatcagaaaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcggtgagatca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagttcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +agatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218605.1/1-7559 |Norovirus GII isolate NORO_134_07_02_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcatcgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccattggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacaaggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgagctgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcagatgggtatgctcctgacaggatccaatgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggcggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtattggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttgggaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatccccaagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcactgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaaaaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctagtcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtagggatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218606.1/1-7513 |Norovirus GII isolate NORO_135_30_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaaacttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaacatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtctccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccgctcaatcagagggagaataaagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctatcattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaagattgagctgacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacagtctcaagaaattggccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgctgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcaggccctaccaggactggaacaggaaacccct +ccccactatggatagctccaaaataaagaaggtggctgacatatttctgtgtaccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcaacctcccttacaggggatcagcgcgtgggcctcgtcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggccccacaaggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaaaatccaaagcgccgccgtgcagaccaacaatgagctgactggcgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgaatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcattacatccgacgacatcaaagctgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggtatgatcttggaagaaggcgctcctgagggcaccgtggtcacactgctcatcaag +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccgacacttagcaccaaaaccaaa +ttctggaggtcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagagaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatctatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctctcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaaggccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ccacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagtgccgattttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgcttcctag +ttactcaggcaga-aatatt------cataatgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcttgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacacgatctggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctgtctttgctggattggcatctgatgtcctcagctctggactt +ggttcccttatcaatgctgg---ggccggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgagtctaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218607.1/1-7513 |Norovirus GII isolate NORO_136_20_02_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacaccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagacactca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagttctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgactttaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaactcatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggcactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttcttactctctgtgcgctctccgaagtcacaaacctgtctcctgacaccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagctttttacagtaagatt +agcaaattggtcattgcagagctaaaggaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaacctttctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gctcaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaacctt-----------ctaac------------tcttctactgctactt-------------------- +----------cagtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218608.1/1-7559 |Norovirus GII isolate NORO_137_08_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggatcgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttactaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctaatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagaggaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagaccaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgttagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaaccgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactggggccgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcgtccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-g-a-t-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218609.1/1-7513 |Norovirus GII isolate NORO_138_23_10_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctatctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccccattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaagggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagtattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaaatactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218610.1/1-7513 |Norovirus GII isolate NORO_139_24_10_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaaaaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaagagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaagcacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218611.1/1-7513 |Norovirus GII isolate NORO_140_26_10_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaaaaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaagagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaagcacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218612.1/1-7564 |Norovirus GII isolate NORO_141_02_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacatt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctatgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttaat +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacctacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtataagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggttactccatgagaggctagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgattttaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgagacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatt +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaacga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcacttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacggt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------cagtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------ttt---tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218613.1/1-7579 |Norovirus GII isolate NORO_142_05_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaaaaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaagagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaagcacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctttctttt-ct-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aag---------------------- +------------------------------------------------------------------------ +- +>MH218614.1/1-7560 |Norovirus GII isolate NORO_143_12_11_2014, complete genome +----gtgtatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------ccccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacgattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatccttaacattctggcaacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgccgcacgctccctagtgcatcgggcgaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgactttctcgtgtacgcagaagcccctgaggtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaatttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaaaaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctatgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggggagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaatccagggacgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctatatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgttatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccattatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +cttctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtagtgccttcgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcgcaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgctttcccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgcccggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218615.1/1-7559 |Norovirus GII isolate NORO_144_13_11_2014, complete genome +----gtgtatgaagat---ggcgtctaac-gacgctaccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcatcactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacattgcatttgacaacaattgctactccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcctgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagtaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggatcagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggtc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaggtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcaatgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgtcggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggctacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaggggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttacgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgttacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgccctccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacggtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttaattcccttacccgatgttaggaataacttctatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatatgcacatt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcgcagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaagcacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgatgccactaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218616.1/1-7559 |Norovirus GII isolate NORO_145_21_11_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctagctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatagacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacagagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagcgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +aaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +aataaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccattatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaggacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaggatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccttcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaagcacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218617.1/1-7570 |Norovirus GII isolate NORO_147_05_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaaacttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaacatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtctccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccgctcaatcagagggagaataaagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctatcattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaagattgagctgacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacagtctcaagaaattggccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgctgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcaggccctaccaggactggaacaggaaacccct +ccccactatggatagctccaaaataaagaaggtagctgacatatttctgtgtaccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcaacctcccttacaggggatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaaaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgaatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggatgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcattacatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggtatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggaggtcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagagaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctctcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaaggccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagtgccgattttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgcttcctag +ttactcaggcaga-aatatt------cataatgtgcatctggcccccgctgtagcccccacttttccaggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcttgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggccctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacacgatctggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctgtctttgctggattggcatctgatgtcctcagctctggactt +ggttcccttatcaatgctgg---ggccggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagtctaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttcc---------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>MH218618.1/1-7548 |Norovirus GII isolate NORO_147-2_10_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----gacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccacca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------ccccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaacttacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtccttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgatttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaataggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaagtcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaactggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgtcgtgatgatttcagggagaccaggtataggaaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtctcatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaaaaacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggagctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgacgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagcgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcaggatggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggtgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacgcttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccacgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccgcccggaacctacgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgagcaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggaggccttcacaggaaaactggcagaccaagcgtcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagtcaag +actgataagatctatggtaaaatcaagaaaagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccatcgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaacaaaattg +aaggaatacgggctgaaaccaacccgccctgataaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccattttcactccctattctgactatctctgaaatgtccaa +ttccagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagctgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcattggat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagatcattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccaaggcagagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcacccctaaactaggctcactagagatttcc------------actgagtc +tcatgattt---tgatgaaaacgaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------tgaggcacactttaaacaatgggctcttcccaa +ctatgctggccag-atctcc------cacaacatgaacttagccccagctgttgcccccaactttcctggtg +agcaactccttttcttccgctcacagttgccat------cctctggtgggcgg-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggccaagctgcacaa +attaggtttcatgactgtagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacttcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtacacagacccacaccaaat---------------------------------t +ttagaac----------------gggccagtctcccaaacccgcacccagcagtgggtcttcagtgagatca +aactcaacccaagtcac--taacctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcca--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccacatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218619.1/1-7532 |Norovirus GII isolate NORO_148_08_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaaaaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctaccaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcactaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +agatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgactcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacagttatgacccaacagaggaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatactcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgcttctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tga---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218620.1/1-7560 |Norovirus GII isolate NORO_149_22_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgacacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactgttcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaacata +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaagtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccacgagaggctagatgaatatgaactgcaaggcc +caaccctcaccacttttaatttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +acgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattctatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggaaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaagccaaaatccggcaga +gagtttttagaccaacaaggaaacaacgtaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcgttgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggaagaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcctgacaaaactgaaggaccccttgtaatctctgaggacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgcttggcgaggctgcactccacggtccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccactcagggctaataacgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatacccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagttcgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcgcaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcctttccaccccc--------- +ca---------------------accattagggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatat------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttccactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatatgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218621.1/1-7560 |Norovirus GII isolate NORO_150_22_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgacacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactgttcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaacata +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggaactggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaagtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccacgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaatttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +acgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattctatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggaaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaagccaaaatccggcaga +gagtttttagaccaacaaggaaacaacgtaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcgttgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggaagaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcgttcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcctgacaaaactgaaggaccccttgtaatctctgaggacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgcttggcgaggctgcactccacggtccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccactcagggctaataacgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatacccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagttcgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcgcaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcctttccaccccc--------- +ca---------------------accattagggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatat------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttccactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatatgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218622.1/1-7560 |Norovirus GII isolate NORO_151_31_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgacacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactgttcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaacata +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaagtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccacgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaatttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +acgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattctatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggaaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaagccaaaatccggcaga +gagtttttagaccaacaaggaaacaacgtaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcgttgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggaagaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcgttcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcctgacaaaactgaaggaccccttgtaatctctgaggacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgcttggcgaggctgcactccacggtccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccactcagggctaataacgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatacccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagttcgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcgcaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcctttccaccccc--------- +ca---------------------accattagggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatat------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttccactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatatgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218623.1/1-7560 |Norovirus GII isolate NORO_152_02_02_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgacacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactgttcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaacata +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgagagagttgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaagtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccacgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaatttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +acgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtaatgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattctatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggaaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaggaagaagaagccaaaatccggcaga +gagtttttagaccaacaaggaaacaacgtaaagaagagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagaccaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcgttgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagaaggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggaagaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcgttcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcctgacaaaactgaaggaccccttgtaatctctgaggacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgcttggcgaggctgcactccacggtccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccactcagggctaataacgc +tggggatgatgtcttcacagtttcttgccgggttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatacccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagttcgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcgcaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcctttccaccccc--------- +ca---------------------accattagggacact---------------------------------g +ccaggaa----------------gagctaatcttagggatat------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttccactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatatgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218624.1/1-7560 |Norovirus GII isolate NORO_153_19_02_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcataagccaccggcagctatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggaggttgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaagaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gactttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtccctatagtgatgggggggataggtttggtgttaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgccgcacgctccctagtgcaccgggcgaaagaagagct +ctccagcaggctgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaaaatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgttaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcatg-ttcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgagctagccggcgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcgctgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------aatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttttgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcctggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaaggggaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccctcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtcctttacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatacaggccaactccctcttc +tccttctatggtgatgatgagattgtgagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgagaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaaacctggat +ggcctaacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attcttagacaaatgtactggaccaggggtcccaaccatgaagatccattcgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccatggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaccaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtactgattcccttacccgatgttaggaataatttttatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggtgatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagtaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacactggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgtggggcaatcaacgcccccatgacaaaagctctggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccagaaa----------------gagctattcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgtcgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218625.1/1-7560 |Norovirus GII isolate NORO_154_02_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggctgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaataccgctctctttgttctg +gagacctgtatacacccccc---aatacctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaatgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggacgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccatcaaggacataatagggaagttgaagcctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtctggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagatcttggtgcatacggactggaaatcttgaaattggt +catgaagtggttctttccaaagagagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatccgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggcgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgattatgggatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgaaaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaagtggaaaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggttccctcatcgcccgagcgtcagggttactccatgagagactagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +acgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtataatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgagctagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattctatcatcc +aaatcgctggggctgcatttgttaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacctaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacgtcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggcttagtgatgaggagtacgatgagtaca +agagaatcagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +ggatctttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcatactccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaattcaaatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaaa +aggccaactggagagcttatgcctctggcagtcagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagaggggaaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggagac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattacaacaagttatgagggaccagctaaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaacgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaacggggagtccttcacaggaaaattggctgatcaagcctctaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggacgaactcaaggcacactgtgtcacacttcccgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatacagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacagacttgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaggacttggat +ggcctgacattcctccggaggactgtgacccgtgatccagctggttggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatccgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctaggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgtaggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggttattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccctgattttgatttcatatttct +agtgccacctacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacggggcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcagtttgaaa---------ctgacacaga +tcatgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggtaga-aacacc------cataatgtgcatctggcccccgctgtagctcccacttttccgggtg +agcaacttctcttcttcagatccacgatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccaccaagaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactataacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgc------------------c +agctgc---------------------------------------aaggactaggagttgggttgaggacca +aagtaggaatttgtcaccttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgaa-ctcctggactggcgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctctc----------t-tc----t--------tcttt- +-------a-------at---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218626.1/1-7560 |Norovirus GII isolate NORO_155_02_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +agg---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggttgcctgagctcaccactgtcagacaacc +ggaggaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggtttcttcaggccgttccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttgaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccaagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagtcctgatttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgagtatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgattaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaaggtaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaaatactccatagaagagtaccttcaggacagagataggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctatttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggagtccatacggccgct +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttctggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatccctcgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgaaaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggagatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaacta +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggtgaggctgcgctccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagcctatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgtctttacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacgga +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgt------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------t +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---gaggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggtgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218627.1/1-7559 |Norovirus GII isolate NORO_156_02_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacgtccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggttccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctggatctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaacgggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagagctgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggacccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagatacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatgtcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-g-a-t-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218628.1/1-7559 |Norovirus GII isolate NORO_157_03_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaaccttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacactcccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagaggacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctagctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaagaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtatgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaagctgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaagatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacagagatggctgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaggagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtactaagactaag +ttttggagatcatccaccacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agaatcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagccgcaaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgttacactccctgtcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcactccagatatagataccactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaggatctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaggatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgtcaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccatcccccgattttgacttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttcccaattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccgag +ttactcaggaaga-aatacc------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaagactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctatcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218629.1/1-7559 |Norovirus GII isolate NORO_158_01_04_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctagctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactcccttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatagacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacagagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagcgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +aaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgccaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +aataaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccattatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaggacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgagggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaggatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccttcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaagcacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218630.1/1-7542 |Norovirus GII isolate NORO_160_14_04_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------at----agcgacaacgcaaaatcttcaagtgacg---------------gagtattatctaacat +ggctgtcacttttaaacgtg----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aag---------------------cccccaagaccacccacaccagagttggtt-------aaggcgattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcata +tcttacaacg----------tcaa---agggggtgtttctggtttgcccgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccattctggagatgtgggacggggagatctaccattatggcttatacgtagaacgggggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtatacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggagagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaaattaaaacccctaaacattctcaacatcttagccacatgtgactg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtctggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcctcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagagaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgaaaacaaccacatgacagctctactcaaggataaagatagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagtt +gtcaagtagaccccgaccggttgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agaattggcaaagaagatcgcctccacactcacaggtgaccagagggtgggcctaatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtttttgacagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgttaaaactatgactgaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggagttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ccaaaccacaagttgaagatctagagga--------aactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaagactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaagaggtggccatagccagggcaactgaagaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgtcgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaagattcagggtcgc +actgttggtggacagatgggcatgctacttacagggtctaacgctaagagcatggatttgggcacgactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aataagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaag +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggtaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagataagaccacttccagcggtcaccctcac +cacatgcggaagaatgattgctggaatggggactctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttt +aggatatcaattaacgagggattaccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccctgacaaaacagaggggcccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcagacagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaattgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaattcccctgg +tgaaatccttcttaatttggaactgggcccaggaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgataatctaagtgcggcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataatttctttcatta +taatcaagggtctgat---tcaagattgcgcttaattgcaatgttatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctgactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagtcaaatctgtgcttt +caggg-----------------------------------------gcgttcttaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctagatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtagccagccaga---gaaa------------ +-----tc------------ctgatgccacaact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcgttggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcggccccctctca +gtctcaagtggctctgattagatatgttaaccctgacactggtagagtgttatttgaggccaagctacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgttcctccaaatgggtattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggaacgtttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcagacaattgattttgaaaataataagtat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggccttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatca-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---a--------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218631.1/1-7559 |Norovirus GII isolate NORO_161_27_04_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctagctacatgtgactg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgcaaagacctaggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgactaccctgctcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgctag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atggactgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacagagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttgatcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtagccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaatactgtcatatgtgccacccagggaagtgagggagaggctacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcacaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccggtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaggacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaagccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaggatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggtcacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggcaaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggtgc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218632.1/1-7559 |Norovirus GII isolate NORO_162-1_03_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgcaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaatatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgagatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctatgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctagctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcgtacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagcccccaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgccggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacagagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacagccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccatttacagagcccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccagatagttgcagaggacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacttgtcccctgatattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagaaaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaggatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggcccccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagagttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagacgcagcccgcggggcaatcaacgcccctatgacaaaaactttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccgggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------gactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactagcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218633.1/1-7566 |Norovirus GII isolate NORO_164_04_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctatcaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagccaacatatttctgtgtgccctgtcctcgctatttac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagataaagacagtttggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattct +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaagctgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctccctcaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcagacaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccactttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctttctt----t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218634.1/1-7560 |Norovirus GII isolate NORO_165_21_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gcgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccctccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacacccttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatccttaacattctggcaacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctagcaagaattgctgctgcacgctccctagtgcatcgggccaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggagaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgactttctcgtgtacgcggaagcccctgaggtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagagcatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgctactgtgcagaccaacaatgagctagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacagagatggttgcctaaagcccaaa-- +-gat----gaagaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagctaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctatgggctgatgatgacagaagtgttgact +acaatgagaaactcaacttcgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttttgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggggagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaatccagggacgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctatatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgttatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagcaccaagactaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggccctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgatttcgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagtagtgccttcgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcgcaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggagttccctc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218635.1/1-7559 |Norovirus GII isolate NORO_166_21_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gcgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccctccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacacccttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatccttaacattctggcaacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctagcaagaattgctgctgcacgctccctagtgcatcgggccaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggagaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgactttctcgtgtacgcggaagcccctgaggtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagagcatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgctactgtgcagaccaacaatgagctagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacagagatggttgcctaaagcccaaa-- +-gat----gaagaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagctaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctatgggctgatgatgacagaagtgttgact +acaatgagaaactcaacttcgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttttgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggggagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaatccagggacgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctatatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgttatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagcaccaagactaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggccctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgatttcgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagtagtgccttcgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcgcaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggagttccctc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc----------t-tt----t--------tcttt- +-------a-------tt---ttcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MH218636.1/1-7566 |Norovirus GII isolate NORO_167_23_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcca-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaaggatgatccagagaacgactggtttcttcaggccctatcaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagccaacatatttctgtgtgccctgtcctcgctatttac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttagtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagataaagacagtttggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggggatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattct +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cggctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tacaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcagggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagtctctcttggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacgcttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacgtgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagtgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaactgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggtctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctaccatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acgaggactgatggctcaaca--------cgc-----------ggccacagagccacagt +gtacactgggagcgccgactttgctccaaagctgggtagagtccaatttggaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acacggatttggactgtctgctccctcaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcagacaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccactttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttctttctt----t-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218637.1/1-7559 |Norovirus GII isolate NORO_168_23_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gcgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccctccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacacccttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaaccccttaacatccttaacattctggcaacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +tatgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctagcaagaattgctgctgcacgctccctagtgcatcgggccaaggaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggagaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgactttctcgtgtacgcggaagcccctgaggtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaattttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagagcatcgcgatcaagaagtgccagatagtgtacaatggtagcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgctactgtgcagaccaacaatgagctagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggctaacagagatggttgcctaaagcccaaa-- +-gat----gaagaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagctaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctatgggctgatgatgacagaagtgttgact +acaatgagaaactcaacttcgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttttgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccccatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggggagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaatccagggacgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctatatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgttatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagcaccaagactaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agggtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggccctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgatttcgacttcatatttct +agtgccacccacagttgagtcaaggactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagtagtgccttcgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccccccaaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcgcaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggagttccctc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc----------t-tt----t--------tcttt- +-------t-------tt---ttcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MH218638.1/1-7559 |Norovirus GII isolate NORO_169_02_07_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgactccaaattaaagaaggtggccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +attagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcacaaccaacctggccaatccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggaatacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagataggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +aaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggct +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacaactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-g-a-t-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218639.1/1-7550 |Norovirus GII isolate NORO_170_23_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agcatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcctaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccatcagttaagatcgggactaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +ccttggggtccacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacatttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgttga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaagccaaagaagaaat +gtttagcaggatcagacctgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagcatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttgtgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctagtctatgcagagtcaccagaagttgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccacatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatttgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcaggcaggcaagagccagatattatgtcagctgcttccaagatctcatttacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaatcagaaggtaagaaaggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggaatatgacgagttca +agagaattagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcagaaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcccaagggaattaaggaacttttt +ggggttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtccc +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaatactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcctgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacggaacccagaggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgac +cccgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgttaggaaaaatgaccattggaatggggaatccttcactggtccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggtatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagtcaactcgatgttggagatttc +gtcatctcagtccaggagggtctgccatcgggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaggactca +atcctcagacagttgtattggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtgatgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggtcctgagctcaacccttatttgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +cttttccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattcttccatta +taaccaggaaaacaac---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgtagagtcctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctatccaa +ctccaga---ttccccgctccgatagacatgttgtacaccgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggactacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +cactgattt---tgatgatggacaacccaccc---------------------------gctttaccccta- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------ctcaacatgaatttggcccctgcagttgctcctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcaacatttctaccaggaggccgccccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaataaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcgggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaatagacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaatatacggcaaggggttttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggactggaatgga +acaaggcactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ca-----------ggcaacccacttcaccc---cgttctgattc---------------------------c +ccaa-------------------aaatcaaagttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctattgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctctgactg-------cggg--------gt +ccagctc----a---tctag-------------------gacaacaccctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcgaccgttcccaa +agctattttgga-ctcctggactcctatgt------------ttaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218640.1/1-7550 |Norovirus GII isolate NORO_171_09_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagagagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaactatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtgggactcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacgctgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccggatttttcccacataaaactga +ctctagccccacagggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgtccatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaagctcaaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacactaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggagaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggcctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtacaa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +taggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaactg--- +--attcagctcaa--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgaccctacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggcg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---ccttctgcatc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaactca---ctcgacggctttgactg-------tggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacagcttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---cccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218641.1/1-7550 |Norovirus GII isolate NORO_172_02_04_2015, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctagtaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgctgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaaaatcgggaccaagacattaacagttcc +tcc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------cgaagtcggaaactgtgctcgggctaccagacttgacaacagt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttactg +gaggcctgtttacaccccca---gctatctggtctgtccagacacgttgaagggccttgctggtgagaggtt +cccctacacggccttcagcaacaattgttacaacttttgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaatttcatagcctccctgataggtgattttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgtaaagacttggggaattatgcccttgacatattgaagctggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaagatgccgt +cctggacatggaagccataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctatccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcataggcaaaacccacatggcaag +acacttggctaagagtatcgccaataccatgagcggcgaccagagagtaggactcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgttaa +agatgccctaacacttcaagagttggccgacacgtgtccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagcgatgtcatcataatcacgaccaatttagtcaatccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaaggatcgactttctggtctatgcagagtcaccagaaattgagaaggtca +agagagatttccccggccaacctgacatgtggaaggaccattttaagtcagatttttcccacataaaactga +ctctggccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcgggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtttctgttgacaaagtcgaagaccaaacatcccagactgcaaacgaagtgggtgcagcac +ttcttagactcaggcaggcaagagccaggtactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------tcaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaatggtaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagtcgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatctttcgtcccacaaagaaacagaggaaggaagaaaggggagtacttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacacaaggagtgtggact +acagcgagagacttgactttgaggctcccccgagtgtctggtcgagaatagtcccattgggcactggttggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatc +agaccagatgtcacggggctcgtgttggaggaaggcgccccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcacgcatccatgaaaattcagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgttatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacctatgagcctgcctacttgggaggtaaggacccc +agagtagaaaaagggccatccctgcagcaagttatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgtcctagaacaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaattagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaactcagcaaaggaacatcctctcggccgctatggaggtgatgg-tgcggttctctg +ctgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggtgatttt +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattttacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaaattgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtccccttgtgataactgaagatcttacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagtatggtccctcattcc +cagcgggccacacagctcatggcacttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcaccgtttcaccaaggaactcacctgg +tgagatgcttctgaatcttgaattaggccctgagctcaacccctatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaacgcgttcacagc---tggtaaaatcat +ctttgccgccgttccgccacatttccctgttgagaacattagtgcagcccaaattacaatgtgccctcatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccccgatataaggaacagattcttccatta +taatcaggaaaatacc---tcccggatgagacttgtggctatgttgtacacaccccttagagc---taattc +tggcgaggatgtgttcacggtgtcttgcagagttctgacccgtcctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccttttacactccctattctaactcttggagagctgtccaa +ttccaga---ttccccgctccgatagatatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactcttgatggaacacttcaagggaccacccagctggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatacgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccaaaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------actctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttacc------cttaacatgaacttggctcccgcagttgctcctgctttccctggtg +agcgcattctcttcttcagatcagtagtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggtccagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggctaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactgggcaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagcaggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaagcatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaagtagtatgaagacaaccagttattcggg-ccagttttccagtaaccctgtaca +ta-----------ggcaacccactttacct---cgttctgattc---------------------------c +ccaa-------------------aaaccaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctctgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctatt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgactgggtgaggggaca +aaatgagaggcttagcccgtttatgg---atggcgctctccaaacaacttttgtcacgccaccatcgagcaa +ggcttca---tcac------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218642.1/1-7524 |Norovirus GII isolate NORO_173_08_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttccaataaagaagaggt------tggtgcattctccaacat +caaagtaggttttaagaaaa----tactgggtgctgttcccaagggaacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------tgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcaaaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccaccgaaccgct +tcctggcacaatattagagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actacctggtctgtccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaattgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgctcttgggtcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttactcgcatcatgtgattg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcttccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggtcctcggctttactgctgagaagataggccgcatgct +gtcgtcagctgcatcaacgctgcgggcatgcaaagacttggggaattatgcccttgacatattgaagctggt +tatgaagtggttcttcccaaagaaggaagagaaagccgagatggagaccctaagggcgattgaggatgccgt +cctagacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacacaaggccaaagaagaaat +gtttagcaggatcagacctgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggtgaccagagagtagggctcgtcccacgcaacggggt +cgatcactgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +ggatgccctgacactgcaagagctggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgactaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctctagacgggtcgactttctggtctatgcggagtcaccagaaattgagaaggtta +agagagattttcccggccaacctgacatgtggaaagaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaactttgataccaacagggtctctgcatttaggaagctggccgcagacaacaagt +acgggatcatggagacaatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaaattcaatgagtgtgagataatttacaggaactccaaatatcgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagccagatactatgtcagctgcttccaagatcttgtctacaccctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaagagattctgct +gggagagatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagtata +agagaattagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgctcggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggatt +acaacgagagacttgatttcgaagctcccccgagtgtctggtcaagaatagttccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaagtcaaacagatccaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggagggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggaacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacaaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggaccct +agagtagaaaaaggaccatccctgcagcaagtcatgagagaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaactattgac +cctgctaagccatggacctactcccaagcatgcgcctcactggacaagaccacctccagtggtagccctcat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatctataagaagataaagaaaaggctcttgtgggggtcggatcttggtacaatgatcaggtgt +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcataaccctcccatgtagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccgtcaggggtcccatgcacatcacaatggaattcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctagtccctactcgacctgacaaaactgagggtccccttgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggatccagctgggtggtttggaaaattagaccaagactca +atcctcaggcagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtcccccattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttataagaaggtc +agcaagatggtcattaacgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgagccggtagtgggagcttcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcgccgaggaactcgcctgg +tgaaatgctattaaatcttgaattaggcccagaactcaacccttacctaagccatctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgctgtgccaccacatttccccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgagccagtactcctaccccttcctgacataaggaataggttctttcatta +caatcaggaggacacc---ccccggatgagacttgtggctatgctttacactcccctgagggc---caactc +tggtgaagatgtgtttactgtctcttgtagggtcttgacccgtcctgcccctgattttgaattcactttctt +ggtaccaccaactgttgaatcaaagactaaaccttttacactacccgtattaactcttggtgagctatctaa +ttccaga---ttcccagccccaatagatatgttgtacactgatccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactttgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggaggaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaaccttgatggcacgcagtatgaccctactgatgaagtgccagc +agtccttggtgccattgatttcaaggggactgtctttggggtggccagtcaga---gagacgtgtcaggaca +-----ac---aagtggga---------gcaact--------cga-----------gcccatgaagtgcacat +caacacaaccgatcctaggtatacaccaaaactggggtccattctcat---gt---------actcagagtc +ggaagactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcatcagtgggagctgcccga +ctattctggacac-ctaacc------ctaaacatgaacctcgccccagcagttgctcctgcattcccgggtg +agaggattcttttcttcaggtcaattgtcccgt------ctgctggtggcta------cggct--------- +--ctgggcaaatagactgcctcataccacaggagtgggttcagcatttctaccaagaagctgcaccatccca +atctgccgtggcactcattaggtatgtcaaccctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggctaattctggcaacaaccctattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggtgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttacaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacattaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggctgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttcc---catgctgtttc---------------------------a +tcaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ttagtgtatatagttccccttcttctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ctgggtc----t---tccag-------------------gtccatctccacat---------ctacagctac +ccccac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggcttagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +atctgcgcaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------ttttctt------c----------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218643.1/1-7550 |Norovirus GII isolate NORO_174_03_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +aagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagagagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaactatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatacttgctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtgggactcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacgctgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccggatttttcccacataaaactga +ctctagccccacagggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgtccatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaagctcaaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagcgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaacccga-----aaagg +aagtggcccgaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacactaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggggagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggagaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggcctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtacaa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgccccttcctgacattaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaactg--- +--attcagctcaa--------cgggtgaggg----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgaccctacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agtcaccacaaaccctagatataccccaaagcttggcactgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagacg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggcg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---ccttctgcatc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctacatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------tggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacagcttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---cccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218644.1/1-7550 |Norovirus GII isolate NORO_174-1_13_11_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcttataaagaagaggt------tggtacattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +aagtttgatg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatatactgtccccccattgagtgaaagagagcacagaccagctgctgaaccgct +tcctggcacaatactggaaatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcataaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactgcgggcgtgcaaagacttggggaactatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcgcggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcaccattaatgccatacttgctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtgggactcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacgctgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagactttcccggccaacctgacatgtggaaggaccattttaagccggatttttcccacataaaactga +ctctagccccacagggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccatgggtccctgactgcaagggttgcaggtcttgtccatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagggtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaagctcaaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccagacatcccagaccgcaaacgaagcgggtgcagcaa +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaacccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcttgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggcacagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacactaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaaagaactcttt +ggagttgagatcaaacagattcagattcataagtctggggagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgttcacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagagcccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggagaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacattctaaatataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggcctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaggatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaagaggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtacaa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgccccttcctgacattaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacacttcctattctgactcttggagagctgtccaa +ctctaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaactg--- +--attcagctcaa--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgaccctacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacaggggg +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaactctagatataccccaaagcttggcactgtgttgat---gt---------attctgaatc +tgatgattt---tgataatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagacg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgcttttcctggcg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattagcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---ccttctgcatc---------------------------c +ccaa-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagttctatatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atccaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgttcatgg---atggtgctctccaaacagcttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---cccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218645.1/1-7521 |Norovirus GII isolate NORO_176-1_17_12_2015, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgcgcacttgggtcactattttc +aaaaccaatcaaggacctattgggtaaacttaaaccgttgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattacaggggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggtatggttctcggcttcactgctgagaagataggccgcatgtt +gtcgtccgccgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccttaagggcgatcgaggacgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcctt +catgaagactctggatttagaagaggagaaagcaaggaaactgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaggaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctagtcccacgcaatggggt +cgaccactgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaaaccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcggacaacaagt +atgggatcatggagacaatgagagtgggtacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaagggctctgtctctgttgacaaagttgaggaccaagcgtcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagccaggtactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgctggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagcgaacccga-----aaagg +aagtggcccaaggta---gatgggaggttgaacccaaggacatagagacagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgatgagttca +aaagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctctt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagtcgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagcggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacacgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggcacaatgatcagatgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-caaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtacaggagggtctgccatcaggggtcccatgtacatcacagtggaattcaatagcacactgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgacgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agagaatatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctgagtcacctgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaatattagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttcttccatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggttttgacccgacctgcccctgattttgaatttactttcct +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccagg---ttcccagccccaatagatatgttgtacactgacccaaatgagggaatcgtagtccaaccaca +aaatggcagatgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactggggtccattctcat---gt---------actcagagtc +ggaagactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcaggaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaataaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgtaga---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgttggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgatttcaataaacag--- +------------------------------cttcaaatggcatcgtttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattttggactggaatggc +accagatattgggcacctaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttct---cacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +cgattctg-----------ctagtgtatatagctttccttcctctgcttcctcac----------------- +---------------------aatcaaccca---ttcaacagtactgtcag-------cagg--------aa +ccgggtc----t---tctag-------------------gtccacctccacat---------ctacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------tcaacacacataggcagcctctcttcgccc +atctacgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218646.1/1-7548 |Norovirus GII isolate NORO_177-2_26_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaattatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctcacaactgtcacccaacc +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggtt +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgacggatgactccaaagtgaaaaaggtggccaatattgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagaccttggtgcatatgggctggagatcctaaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgctgt +gctagaccttgaagccattgagaacaaccatatgacatctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaagaattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcatgataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttccttgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagaggttagacgagtatgagctgcagggcc +caactcctacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cacttaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcatgtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacaa------acatacagaacctctggt +ccaagccacaagcagaagatctagagga--------gaccaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +aaactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagagcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaggcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcgcgaatagtcaacttcggctcagggtggg +gcttctgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggctcagattcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgccccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgccaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aataagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactgaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaaaaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgaactagtcaag +actgacaagatctatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaagcactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatatgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atacttaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcatcacccctcactggtcagcaaaatatgattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtgccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgccaagccaaatctgtgcttt +caggg-----------------------------------------gcgtcctcaccagat----------- +-----------caacaagcaga------gccaatgaccaggccgatacagcaacccctagacactttg---- +-------gtcttt----------------------------------cttggcac----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggataccagatttccgtggcaaagtctttggcgtggccagccaga---ggaa------------ +-----tc------------ctgataccacgact--------agg-----------gcgcatgaagcaaagat +agatacctcttctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaactcaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttagacagtgggccctacccga +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaactaccctggtg +agcaggtccttttcttccgctcacaattgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtcccaagtggccctggtcaggtatgttaatcctgacactggtagagtgttatttgaggccaaattacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttgtagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataatagatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctcc---agct------------------------------caggca---cagtctcaactgtgcccaa +agatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218650.1/1-7550 |Norovirus GII isolate NORO_182_19_09_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccctttctaacaaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcggggccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggcgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttttc +aaaaccaatcaaggacctattaggcaagcttagaccattgaacttgctgcatttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcctttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggtataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcgtgcaaagacttagggaattatgctctagacatattgaaactagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagtcagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaagggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgatgccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggagacaagtgaatccga-----aaagg +aagtggcccaaggta---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggttcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcttgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacaaattcagattcataagtctggagagttctgtaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatctatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggcccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagagaccagctaaaaccttttacagaacccaggggt +aagccacctagacctgcagttttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggataagaccacttccagtggtagcccccat +catgttaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgccgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcagccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcgcaagtggttgcagaggatctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgaaggtcccctcgtaataactgaagatctcact +ggcctaacgtttctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgagccacacaacttatggcccttctcggtgaggcctcactgcatgggccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagttgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgaaaacattagtgcagcccaaatcacgatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---tcccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcgctctagatggaacacttcaaggaaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggttgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +tggtgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tgggt--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaataaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactgggcaggggcgcaga---------ag +agtcc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcaccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaatccacttcaccc---cgttccgaatc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgtatctactactccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctcct---------ctgcagtagc +ttccac-------------------cat--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------cttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218651.1/1-7484 |Norovirus GII isolate NORO_183_23_09_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gtgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-cccccgagggacacaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttacagtg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcaaagggagaacagagatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggactagt +gctcggtgtacacaaaccaccagcagccatcagccttgccaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctaagaaaattacatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccctaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagagtccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctacaggggcctgaggacctcgctgtgga +actcgttcctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagacaaacgagttggcaatggtgagatccatcgaggacgcagt +gttggacctcgaggccattgagaacaaccatatgacagctctactcaaggataaggacagccttgctgccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccggtctctagtacacagggctaaggaagaact +gtctagcagacttcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaactgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccgcaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctccttcacgagagactagacgagtatgagctacaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgacacaatgagggtcggatcacaactcaagaacgtcaaaaccacgacagaacttaaacagg +ttctcaagaacatcacagtcaggaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgaaagggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgttcaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacagaacctatggt +caaagccacaagtggaagatttggagga--------gactagcaacaaggagggctgttcaaaacctaaa-- +-gat----gacgagg---agtttgttatctcctctgatgacatcaaaactgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggtctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtagccatagccagagcaactgaggaggatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggagagggcctcccttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgactttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggcgcacaggagttcttt +ggagtgcctattaagcaaatacaaattcataaatcaggagagttctgccggcttagatttccaaaaccaatc +aggaccgatgtcacgggcatgatattagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +gctgttggtgggcagatgggcatgctactcacggggtctaatgccaagagcatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +gataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacttatgaaccagcttatctgggtggcaaggacccc +agagtgaagggtggtccctcactgcaacaggttatgagggagcaattaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataaaactacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaagattggcagaccaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagccctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctgtggggttcggacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgaactcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaagatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctagaaataatgg-tcaaattttcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaatgaggggctaccctctggtgtgccttgcacttcacaatggaactccattgcccactgg +ctcctcacactatgtgcattatctgaggttacagacctgtcccctgacatcatccaggcaaactccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcttgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctacagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggtgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagaatttacagtgtcacccagaaattcccctgg +agagattctgctaaatttagagttgggaccagatttgaatccttatttggcccatctatcaagaatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctaccattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtttttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagaacttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtggg--g------acaattggg----------------------------------- +----------acc----------------------------------aaaatttg----------------- +----------------ctccagctgacctacccaagtggtgcaacctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---acaa------------ +-----tgtaagtgagagtacaggggaggccaaa--------aat-----------gctaagggggtatacat +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcat------------tcaataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctcagaatga------------aaacacccccttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattgctgttcttcaggtcccgtgttccatgt---gttcaaggtctgcg--------------ggggca +ggatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgccccctccca +agcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtacctaccctcttgtggtccccccgaatggtcattttaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattataataaacaa--- +------------------------------ctccaaaatgcatcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcacc-ccctc--------- +gc-------------cagtccatcgggcg----caggt---------------------------------- +--------------------------------------gaagtccccttccaattcatcc-cagcggactgc +agctccaagcag------------------------tatccgcagcctgtcaacccaatcaac--------- +---ttctt--------------------------------taggctccacctc------------------- +------------------------ctcaggg------gggtcctct-------------------------a +cagcctc--------c------------------------------------t------------------c +tagttc---------------------------------------gaggacggcagattgggtgcaacaaca +a---agggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaagg-at-------- +-------aat-caatt----ttta--aa------atgt-g--------at-ttta-------------ttt- +--------------tc-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218652.1/1-7560 |Norovirus GII isolate NORO_184_23_09_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactgatt-------aaaaatgttcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgctatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagagattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacctct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcactattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcttcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggacctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaattaacgccctcctggcgagaatcgctgccgcacgttcgctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggcctcattccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagagtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactag +cactggccccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagctcgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgataggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagcggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgaccgaggaagacttctgtgaggaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctccctcggcttggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcctgagattccctagaccaatc +agaactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcctctagcagctaggatggggacccatgcgaccatgaagatccaagggcgt +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggttattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggggaggctacacttgagggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcagacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcctccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctttggggctcagacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgttacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattctaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcccgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctacggagaactgtgacccgcgacccagctggttggttcggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagtcaggtcactatgtttccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagagctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctaggactaaaccattctctgttccagtcttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgtacgactgatggcgtactcctaggcaccacccaattgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagagattccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacggt +gctcactgggagcgccgactttgctccaaaactgggcagagttcaatttggaa---------ctgacacaga +caatgattt---tgtaaccaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtaacaccaccccccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cataatgttcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggtcattaatcaaaaagttgattttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaattcacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttcaacccct--------- +ca---------------------gccatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtagtcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218653.1/1-7548 |Norovirus GII isolate NORO_185_28_09_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaactatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctcacaactgtcacccaacc +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggtt +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgacggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaagtcggcaagatgct +ctcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggctggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaactggcaatggtgagatccatcgaggatgctgt +gctagaccttgaagccattgagaacaaccatatgacatctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttccttgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcctacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cacttaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaagtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacaa------acatacagaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +aaactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagagcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaggggaaactatgggctgatgatgacaggagtgttgact +ataatgagaaacttagtttcgaggctccaccaagcatttggtcgcgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgccccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactgaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatatgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgtgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatgtaattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccagttgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatatacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtgccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgccaagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccaatgaccaggccgatacagcaacccctagacactttg---- +-------atcttt----------------------------------cttggcac----------------- +----------------atacaattggataatctaaatggaaccccttatgaccctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---ggaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcgcatgaagcaaagat +agacacctcttctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaacacaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttagacagtggaccctacccga +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacaattgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtcccaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttgtagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcggaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218654.1/1-7548 |Norovirus GII isolate NORO_186_28_09_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccatccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaattatt +tcttacagcg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagccagagggagaacaaagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcagtcagccttgccaagattgagctgacccccttgtccttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagctgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattggaaagttaaaacccctaaacatcctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattacgaactacagggacccgaggatctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaagtcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatctcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +cactcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaagtgtgctagaatcaggtattatgttaagtgtgtgcaggaagccctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaatgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgttgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagaaagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttcccttggtttggttacaggttctgaga +ttaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaaatcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacggggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctacgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagcagccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catgtgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagatctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacataaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcagactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtcccccagaaactcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatccccccaaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taatcaagggtctgat---tcgaggttgcgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacctttttccctccctatcctgaccatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccactgaccaggccgacacagcaacccctagacattttg---- +-------atcatt----------------------------------cctggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgataccacgact--------agg-----------gcgcatgaagcaaagat +agacacctcatctccccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tgatgattt---tgaacacaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggaagactttagacagtggaccctacccaa +ctacgctggtcag-ctcaca------cataacatgaatttagccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tcta---------- +--acgggattctagactgcctagttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +atcccaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +attaggtttcataactatagccaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgctgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-cacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcggaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218655.1/1-7537 |Norovirus GII isolate NORO_187_01_10_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +gtgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctccccttagccaaagggaaaacagggacgctaaggagccgtt +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccattagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaaacccct +cccaactatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgattg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaatcatatgaccactctattgaaagacaagaacagccttgcagccta +catgaaaaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaatgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagagctggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +taactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgccctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ccgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgtcagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaaatgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggatagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatctcggcaccacgcct +ggtgactgtgggtgtccctatatttacaaaaggggtaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagatcaactgaagccattcaccgaaccccgtggt +aaaccaccaaaaccaagtgtccttgaagctgccaaaaggacaattatcaatgtgctagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcatctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgactccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaaaataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctggctgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagatattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggacctgaat +ggcctgaccttcttgaggagaaccgtcacccgtgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgttccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaacaatttcttccacta +caatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtagatgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttgcacga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----agaatagccctgggcacaatg----aaccagc----aaacaggggacacgacgctgtggt +tcctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtgtttccaggag +agcgtctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggactggaacggt +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------tacatcaaccgcccc---------------------------------a +gtgagac----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcgaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgattgggttagagatca +aaatagaaatttggaaccctatatgt---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218657.1/1-7497 |Norovirus GII isolate NORO_196_18_10_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cctccacgaccgcccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccgggctgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaatcaaagggagaacagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatctaccattatggcctgtacgtggatcgaggccttat +actcggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttattctg +gaggcctgtatacacccccc---agtatctcatctctccagacactctcaggagattacatggagagttatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatatttttgtgcaccttatcttcactattcac +cagacccattaaggacataataggaaaattgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaagggcctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgccgcatccactttaagagcttgcaaagaccttggtgcatacggactggaaattttgaaattggt +catgaagtggttcttcccaaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatatcgt +gggcacaatcaactctctactggcaagaatcgctgctgcacgctctctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacccgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaaaaagatcgcgtcctccctcacgggggaccagcgcgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaaaggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctacaggaacttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagatgctcctggggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaaggacgctttcaatcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccaccggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggatgatggacacaatgagagttggaagacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaaaaagtgtcagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgagggttgacaaagtacaaagtgccactgtgcaaaccaataatgaattagccggtgccc +tacaccacctgaggtgcgccagaattagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaagtggaagacacagaaga--------gatggttaacgaagatggttgcccaaaacttaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaaggacttagtgatgaggagtacgaagagtaca +agagaatcagagaagaaaggaacggtaagtattccatagaagagtatcttcaggacagagacaagtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +gaatttttagaccaacaagaaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttctgaaa +tcaggaaaagaaacccagaagatttcaaacccaagagaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtgtccc-ccagcctgtttataacttcaacccatgtcatacctcaaggtgcaaaagagtttttc +ggagtctctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtggcgggcatgattctagaagaaggcgcgcccgaaggaaccgtggcaacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgattacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aataaaggaacatattgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccaccaggcacctacgaaccagcctacctcggtggcaaagatccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagttgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttctagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccaccccaaaaatggtcatttgcgcaggcctgcgcatcccttgacaaaaccacctccagtggccacccgcac +catatgcggaagaacgactgttggaatggggattccttcacaggaaaattggcagaccaggcctccaaggct +aatctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcactaaaagatgaattggtgaag +actgataaaatttatggtaagatcaagaagagacttctgtggggctcagatctggcgaccatgatacggtgt +gcccgggctttcggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtataaatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaattatgg-tcaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagatctcctttcccctagcgttatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaattcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggatccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagatctggat +ggcctaacattccttcggaggactgtgacccgtgacccagctggctggtttggaaaactggaacaaagctca +attctcaggcaaatgtactggaccagggggcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccgacattttatagcaaaatt +agcaaattagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccctggcagccccagtcaccggacaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgttattgaatctagagttgggtccagagttaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +ctttgccgccgtaccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgtttccccatgt +gattatagatgtgagaactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaggatgat---cctaagatgagaattgtggctatgctttatactccccttaggtctaatggctc +aggtgatgacgtgtttacagtctcatgcagggtgttgactagaccctcccctgattttgatttcacatattt +ggtgccaccaacagtggagtctaagactaaaccattcaccctcccaatcctcacgcttggggagctctccaa +ttctaga---tttccagtgtccatagaccagatgtataccagccccaatgaagttatatcagtgcaatgtca +aaatggtaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcctt +caagg-----------------------------------------gagaggtgaccgcccatttgc----- +----atgacaat-------------------------------------------------------g---- +-------accatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgattttcagggaagggtcttt--ggtatcatctccca---aagagacaaacacaac +agcc-ct-----ggacataatgaaccagcaaac--------agg-----------ggacacgatgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcaaattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggac---------ttaacgacactg---------aacattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtttttccagggg +agcgcctgctctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagctattgattgtctgctaccacaagagtgggtgcaacatttctatcaggaagcagctccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacaacaaaattctttcaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggagtcttgaccgctggc +ggcttctcccccgctgatgcagccagaggtgctgttaatgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagattcacatcaa----------- +-------------------------------ccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccaacacacccagagccggccttcgag------------tgg +c---tctt-----------ctgtg------------tcctcctttactactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacataa------cacagtttc------------------------at +caaattc--------aactcgcagtacaaacctctcccaatcaacggtttctag---------------ggc +tacatc---------------------------------------taggacaggtgagtgggttagagatca +aaataaaaatttggaaccttacatgc---atggtgccttgcagacagcctttgtcaccccaccttctagcag +ggcgtct------g------------------------------atggga---cagtctcaaccgccccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218658.1/1-7542 |Norovirus GII isolate NORO_197_04_11_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agcaacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagctaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattggattgccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccaccgaaccact +tcccggcacaatattggaaatgtgggatggcgagttttaccattattccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcagctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcctgtttacactccca---attacttggtctccccggacacattaaagggtctcgctggtgagaagtt +cccctatacggccttcagtaataactgttataatttttgttgttgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttctagaaccactggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaaaaaggtggccaacgcaatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagacctgttaggcaaactcaagccactgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttttggaccccccc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggtttcaccgccgagaagataggtcgcatgtt +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctaggaaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagagcgattgaagatgccgt +cctagatatggaagctatagggaacaaccacctcacaacccttctcaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggattaggccagtggttgttatgatctcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagggtcgggcttgttccgcgcaacggcgt +cgaccactgggatgcctacaggggagagagggtggtcttgtgggatgattacggcatggggagccccgttaa +ggacgctctaacactacaagagctggccgacacatgcccagtcactttgaattgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagggttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctctcacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccaactccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcagaaaattggctgcagataacaagt +atgggatcatggaaacgatgagagtaggtgcggcactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacagaaactctaagtatcgggtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaggacagtgcatcccagactgtaaacgaggtacaatcagcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagatctcgtctacactcttatac +aggttgccggagcatcattcgttgtca---------------gcagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaggtaaatgagtccga-----aaagg +aagtggcacagggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaagggaaagaata +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagggaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcctagtcaccggctctgaca +tcaggaagagaagaccagatgacttccaaccaaaaggcaacttatgggcagatgacaccagaagcgtggact +acaatgagaggctcgactttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggattaaggagctcttt +ggagttgaaatcaagcaagtccaagttcataagtctggagagttttgcaggttcagattcccaagacctatc +agaccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttagcagtgaggatgggcacacatgcgtccatgaaaatacagggcagg +actgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgcggcaacgacattgttgtcgcaggtgttcataccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgaggggaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgttcatcaccagatgccttaccacctggcacgtatgaacctgcttacctagggggcaaagaccct +agagtggaaaaaggtccttcccttcaacaaattatgagagatcagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagttttggaagaagccaaaaagacagtgatgaacgttctagagcaaaccattgac +cccgctaagccatggtcctactcgcaggcatgtgcctcactggataaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagtccttcactggcccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaagcatgtgcaacccgtgtatacggctgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagctgtatagctctcccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgctgccatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctaccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtatcaggtctctcaccagatgtcgtccaagctcactcttgtttt +tccttttatggggacgatgagatcgtcagtactgatatcaaccttgaccccatgaagttgacacagaaactc +agagagtatggcctggttcccactcggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacattccttcgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcccaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---cgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtctcccctagaaattcccctgg +tgaaattttgcttgatttggagttgggaccagaactgaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaatttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagccatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagttccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggggatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagtcaac---gcaacaagaatga--- +------------gcagaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tttcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acacct---------cccaccctttcagacagtgggtcttgcctcg +atacggtgggcat-ctcacc------aacaacacccatttggctccagcagtggcccccttattcccaggtg +agcagattctattctttagatcacaaataccca------gctcgggtggcca------tgaat--------- +--tgggctacatggactgccttgtcccgcaagaatgggtccaacacttctaccaagaagctgccacagctca +gtctgaggtggcactcatacggttcatcaacccagacactggcagagtcctctttgaggccaagttgcacaa +gcaaggctttataaccgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggccagtgctttccttgcaaatttggctggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaatcaaaaggttgagtttgattacaacaaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagaaatgattgacataaaacaaggggtgctgacagctgcg +ggattctcccctacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgcctcctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaata--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattcttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtctcttctg----------------- +---------------------tcagaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatga---atggagcgttgcaaacaacgtatgtaacgccaccgtccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgactgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtagacgaggggagtcaca--------gagttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgtttttc-tttc------ta-ctgttcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218660.1/1-7548 |Norovirus GII isolate NORO_199_18_11_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagccgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctggagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagacgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagactac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgacctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcacta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatccggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218661.1/1-7538 |Norovirus GII isolate NORO_200_25_11_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaacaacgccaccccttctaacaaagaagaggt------tggtgcattctccaacat +taaagttggatttaagaaaa----tgctgggcgccgtacccaaaggtacc-------------aaagcgccc +agcagtaa----------------tcaaaattgccccacagttaaaatcgggcctaaaacgttaacaattcc +tcc-----------------------------tgagcccccaaatgg------tgaagac------accgta +caatttgatg----------caaagtcagaaactataattgggctaccagacttgacaacggt---gcaaaa +cgaacacgaaaacaatccatacactgtccctccattaagtgagagggagtacaggccggccactgaaccact +tcctggcacaatactggagatgtgggatggtgagttttaccattactccgtgtacgtcagtgatggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactctactg +gaggcccgtttacaccccca---actacttggtctctccagacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaataactgttacaacttctgctgttgggtgcttgatctcaacgacacgtggct +taa---tagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaatagaaaacctct +cccaactgttgatgatggaaagatcaaaaaggtggccaatgcaatcctctgtgcactcggttcgctgttttc +aaaaccaatcaaagacctattaggcaaactcaagccattgaatctactacacttgctcgcgtcctgtgattg +gacgtttgcaggcatagtggagacagtcatcttaatggcggaacttttc---aacgtattctggaccccacc +agatgtctctaattttatagcctccctgataggtgattttgaattgcaagggcctgaagacctggctgtaga +gctcgtccccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactacgcccttgacatactcaaattggt +catgaaatggttcttcccaaagaaggaagagaaggctgagatggaaaccttgagggcgattgaagatgccgt +ccttgatatggaagctatagggaacaaccacctcacgacccttctcaaggacaaagacagcctcacagcttt +catgaagaccttggatctagaagaggagaaggcgagaaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaacgccatattagctaggatagctgctgctagatccctactacataaggccaaagaggagat +gttcagtaggatcagaccagtggtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +gcacttggctaagagcatcgccaataccatgagtggcgatcagagagtcggactcgttccacgcaacggtgt +cgatcactgggacgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +agacgccctgacactgcaagagttggccgacacatgtccagtcactttaaattgtgataggattgagaataa +gggaaagatgtttgatagcgatgtcatcataatcacgaccaacctagtcaaccccgcacccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttttcccatattaagttga +ctctagccccccagggtgggtttgataagaatggcaataccccacacggcaagggtaccatgcggtccttaa +cccaggggtccctaactgcgagagtcgcaggccttgtccatgagaggagggacgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcatttagaaaattggctgcagataacaagt +atgggatcatggagacgatgagagttggtgcagcgctcaagagtgtgaagaccttggaagatcttaaagctg +cattgagggatgtgaaattcaatgagtgtgaaataatttacaaaaactctaagtaccgagtctcttccaacg +gcaaaggctcggtttctgttgacaaagttgaagacaatgcttcccagactgtgaacgaggtgcattcagcac +ttcttagactcaggcaggcaagggccagatactacatcagctgcttccaagacctcgtttacactctcatgc +aggttgcaggggcatcattcgtcgtca---------------gtagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgagac-------------ccaggaagtgaatgagcccga-----aaagg +aagtggcccaaggtg---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcaaggaagaaaggaacggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaggtggcagttgctcgggcaacagaggaggacttctgcgaagaggaggaagccaagataagacaaa +gaattttccgtccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcactggctcagaca +tcagaaagaggagacccgatgacttccaaccaaagggcaacctgtgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcacctccgagtgtttggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaagggatcaaggaactcttt +ggagttgaaatcaagcaaatccaagttcataagtctggagagttttgcaggtttaggtttccaagacccatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagagggcactgtctgttctgtactcgtaaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacgcacgcatccatgaaaatacagggcagg +accgttggtggccaaatggggatgctcctcacaggagcaaacgcgaagaacatggatctcggtactggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacatagttgtcgcgggtgttcacaccgcagca +gcccgggggggcaacactgttatatgcgccacccaagggcaagacggggaagcagtccttgagggaaatgag +gaccttggcacctactgtggcgccccaattctgggtcctggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgctcatcaccagatgccttgccacctggcacatacgaacctgcttacctaggaggcaaagaccct +agggtggaaaaaggtccctccctgcagcaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccgcccagacctgcagtcctagaggaagccaaaaagacagtgatgaatgttttagaacaaaccattgac +cccgccaagccatggtcctactcccaggcatgtgcctcacttgacaaaaccacctctagtggtagtccccac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatctaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtatacggcagcgcttaaagatgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacagaggagcattctctctgccgctatggaagtaatgg-tgcggttttctg +ctgaaccagaact-ggcacaagtggttgcagaggaccttttggctcctagccagcttgacgttggcgacttt +gtcatctcagtccaggagggtctaccatcaggagtcccatgcacatcacaatggaattcaatagcgcactgg +atcctgactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttacggggacgatgagatcgtcagtactgatatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggtccccacccggcctgataaaactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctccgtaggtcgattgctcgggacccagctggttggtttggaaaactggaccaagactca +attctcagacagctatactggacaagggggcctaaccatgagaacccgtatgagagcatggttcctcattct +cagcgggccacacagctcatggcccttcttggtgaggcctcgctgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagcggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtgccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccccagaaattcccctgg +tgaaattttacttgatttggagttgggaccagagttgaacccctatctcgctcatttggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatacgaaaatttgtcaccttcacaaattacaatgtgcccccatgt +tataattgatgttagacaattagaaccagtcctattacctatgccagatattagaaataatttcttccatta +caatcagggcaatgat---ccaaaattgaggttggtagctatgctctacactcctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggttctcactaaaccgtcacctgattttgaattcacattttt +ggttccccctacagttgaatccaagaccaagcaattcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccggtggaaatgatgtacacagcaaggaatgagaatcaagttgtccagccaca +gaatggtagggtcacactcgatggcgaactattgggcaccacacccttgttggctgtcaacatctgtaaatt +caagg-----------------------------------------gagaggtcatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaatcaccaacactgatggcaccccaattgaccccactgaagatacacctgg +tcccattggatcacctgattttcaaggtatactctttggcgttgccagtcaac---gcaacaagagtga--- +------------gcaaaa-----tcctgccacg--------aga-----------gcccacgaagccaacat +caatactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcatcagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggtg---accctt---------cccaccctttcagacagtgggtcctgcctcg +atatggtggacat-ctcacc------aacaatacccacttggctccagcagtggcccctctattcccaggtg +agcagattctgttctttagatcacaaataccta------gttcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggtagagtcctctttgaggccaagctacacaa +gcaaggctttataactgtggctcacactggtgacaacccaattgttatgccaccaaatgggtatttcagatt +tgaagcctgggtcaatcagttttactcactcgcccccgtgggaactgggaatgggcgtagg---------ag +gatcc---------aataatggctagtgccttctttgcaaatttggcagggggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccacgataaggaaatgctccaa +gcccaaattgaagccactaaacgcttgcaacaagagatgattgacataaaacaaggggtgctgacggctgcg +ggattctctcccacggatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggctcctggtgccatgaggacaacaggctactcagggaccttcactcacttgcctcctatg +ca-----------atctgcttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaactttttaaag----------------------------------- +----------------------------------------tggatccttctccctc---------------- +---ttctt-----------caagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactgctctctcagg-cacttcaag--------gg +tggactc----t---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagctc-------------------a--------------------aggacatctgattgggtgcgtagcca +aaatgaaagattgagcccctttatga---atggagcattgcaaacagcgtatgtaacgccaccatctagcag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccgctcttcgccc +acctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagatta-------- +-------att-aggaaagtttgattagttt-----tcttttc------ta-ttattcct---ttaatttttc +t------------ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218662.1/1-7559 |Norovirus GII isolate NORO_201_30_11_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtatccccccactcaaccaaagggagagcagggacgccagggagccact +agctggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccagggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcctct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttaaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaagcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaggaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaagtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaaaccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +actgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgaaaagcactccagatatagatatcactatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +cagatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagttgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggtaccacccagctgtcttctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaagtcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatgctagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctttgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacccttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-g-a-c-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218663.1/1-7559 |Norovirus GII isolate NORO_205_02_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtatccccccactcaaccaaagggagagcagggacgccagggagccact +agctggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccagggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcattcgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcctct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttaaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaagcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaggaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaggcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaagtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaga +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaaaccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +actgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgaaaagcactccagatatagatatcactatgatgctgactac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +cagatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagttgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggtaccacccagctgtcttctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaagtcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatgctagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctttgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacccttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-g-a-c-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218665.1/1-7554 |Norovirus GII isolate NORO_207_07_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactgatt-------aaaaatgttcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgccaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgctatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccggacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacctct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtactctgtcctcactattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaatatcttagcttcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggtttcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggacctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaattaacgccctcctggcgagaatcgctgccgcacgttcactggtgcatcgagcgaaggaggaact +ttccagcagaccaagaccagtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccaacgtgttggactcattccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgcgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagctcgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cacttaagaatgtatcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgataggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgaagacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgagtaca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtatcttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaggaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctccctcggcttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggccgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctagaccaatc +agaactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcctctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggttatcggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggtgaggctacacttgagggtggcgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacaattgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcctccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcagacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgttacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattctaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacgaacctgtctcccgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgtcctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggttcggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggaatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagtcaggtcactatgtttccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---tccaccattaaattgatagcaatgttgtatacaccacttagagctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctaggactaaaccattctctgttccagtcctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgtacgactgatggcgtactcctaggcaccacccaattgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcggg------------------------------------------------ta---- +-------ctcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagagattccagc +ccctctaggaactccagattttgtggggaagattcaaggcttgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacggt +gctcactgggagcgccgactttgctccaaaactgggcagagttcaatttggaa---------ctgacacaaa +caatgattt---tgataccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccaaaatgaacccctacagtgggtgctcccaag +ttattcaggcaga-aatact------cctaatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgactcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggtcattaaccaaaaagttgattttgaaaacaacaaaaatttg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaaattaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttcaacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggactc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtagtcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-----------------------tttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218666.1/1-7521 |Norovirus GII isolate NORO_208_11_12_2015, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgcgcacttgggtcactattttc +aaaaccaatcaaggacctattgggtaaacttaaaccgttgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattacaggggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggtatggttctcggcttcactgctgagaagataggccgcatgtt +gtcgtccgccgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccttaagggcgatcgaggacgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcctt +catgaagactctggatttagaagaggagaaagcaaggaaactgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaggaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctagtcccacgcaatggggt +cgaccactgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaaaccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcggacaacaagt +atgggatcatggagacaatgagagtgggtacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaagggctctgtctctgttgacaaagttgaggaccaagcgtcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagccaggtactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgctggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagcgaacccga-----aaagg +aagtggcccaaggta---gatgggaggttgaacccaaggacatagagacagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgatgagttca +aaagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctctt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagtcgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagcggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacacgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggcacaatgatcagatgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-caaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtacaggagggtctgccatcaggggtcccatgtacatcacagtggaattcaatagcacactgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgacgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agagaatatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctgagtcacctgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaatattagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttcttccatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggttttgacccgacctgcccctgattttgaatttactttcct +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccagg---ttcccagccccaatagatatgttgtacactgacccaaatgagggaatcgtagtccaaccaca +aaatggcagatgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactggggtccattctcat---gt---------actcagagtc +ggaagactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcaggaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaataaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgtaga---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgttggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgatttcaataaacag--- +------------------------------cttcaaatggcatcgtttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattttggactggaatggc +accagatattgggcacctaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttct---cacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +cgattctg-----------ctagtgtatatagctttccttcctctgcttcctcac----------------- +---------------------aatcaaccca---ttcaacagtactgtcag-------cagg--------aa +ccgggtc----t---tctag-------------------gtccacctccacat---------ctacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------tcaacacacataggcagcctctcttcgccc +atctacgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218667.1/1-7521 |Norovirus GII isolate NORO_209_15_12_2015, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtactaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcatcc +agtaatga----------------tcagcactgtcccacagttaagatcgggaccaaaacactaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------agcgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgagttctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttaaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgatacgtggct +tag---caggaagagcatctccaggaccaccggcttctttaaaccataccagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctactgggcagacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctgatggcggaacttttc---aacatcttttggacaccgcc +agacgtttccagcttcatagcctccctgataggtgattttgaattgcaggggcctgaggacctggctgtgga +actcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgcaaagacttggggaattatgctcttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccacctcacaaccctcctcaaggacaaggatagccttatggcctt +catgaagactctggatctagaagaggagaaggcaaggaaattgtccaccaagtcatcctcgccagacattgt +cggcactattaatgccatactggccagaatagctgctgccaggtcccttttacataaggctaaagaagaaat +gtttagtaggatcagacccgtggttgttatgatctcgggtagacccggcattggcaaaacccacatggcaag +acacttggctaagagtgtcgccaacaccatgagcggcgaccagagagtaggactcgttccacgcaacggggt +cgatcactgggacgcctataggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactttgaactgtgataggattgagaacaa +gggaaagatgttcgacagcgatgttatcataatcacaaccaatttagtcaacccagcgcccctcgattacgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaagctga +ctctagccccacagggtggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggtcgcaggtcttgttcatgagaggagagatgagtttcagctccagggga +gcgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atggggtcatggagacaatgagagtgggtgcggcgcttaagagtgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gcaaaggctctgtttctgttgacaaagttgaggatcaaacatcccagactgcaaacgaagtgggtgcagcac +tcctcagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tttctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtggatccga-----aaagg +aagtggcccaaggta---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaggatcgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgactttcaaccgaaaggcaacctgtgggcagacgacaccaggagtgtagatt +ataacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcagattcacaagtctggagagttctgcaggtttagattcccgagaccaatc +agaccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaagatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggccct +ggtgactgcggttgcccttatatctacaaacgtggcaatgatataattgtcgcgggtgttcacaccgcagca +gcccggggaggtaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aatcttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctgggaggcaaagaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagttttagaagaagccaaaaagacagtgatgaatgttctagaacaaactattgac +cctgctaagccatggacctactcccaagcatgtgcctcactggacaaaaccacttctagtggtagtccccac +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggatctcggtacaatgatcagatgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgcagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattccaagtataggtaccattatgatgctgactac +t-ccaggtgggactcaacccagcaaaggagcatcctttcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggatctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacattgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacaaaaactc +agagaatatggcctggtccctactcgacctgacaaaactgagggccccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcgattgcacgggacccagctgggtggtttggaaaattagaccaggactca +atccttagacagttatactggacaaggggccccaatcatgagaacccatatgagagtatggtccctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacttaggtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacatttccccgtagaaaacattagtgcagctcaaataactatgtgcccccatgt +gattgtcgatgtgagacaacttgagccagtgcttctgccccttcctgacataaggaacaggttctttcatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctctatacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggtcttgacccgtcctgcccctgattttgaatttactttctt +agtgccaccaactgttgaatcaaagactaagccttttacattgcctatattaactcttggagagctatctaa +ctcaagg---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggtaccacacaattggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagaact------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccct----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagcgggg---------gcaact--------cga-----------gctcacgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccgatcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccaatgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagttgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatggtcccgt------ctgctggtggcta------tgggt--------- +--ccggacaaatagattgcctcataccacaggaatgggttcagcatttctaccaagaagctgcaccatctca +atccgccgtggcactcattaggtatgtcaatcctgacacaggcagaaacatctttgaggccaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaggcttgggtgaatcaattttatactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accagatattgggcaccaaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcctctgctccttct---cacaccgcttt---------------------------g +ccga-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtatatagctttccttcctctgtttcctcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccacctccacat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacacaggcagcctctcttcgccc +atctacgtagacgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218668.1/1-7548 |Norovirus GII isolate NORO_210_16_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218669.1/1-7564 |Norovirus GII isolate NORO_211_16_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttccagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaattggtt-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgacctttccaccgtcaagcaacc +ggaagaatctaacacggctttcagtgtccccccactcagtcagagggagaatagagacgccaaggagccact +tactgggtcaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtctcgt +gctaggcgtgcacaaaccaccagctgccatcagcctcgctaggattgagctagcaccactctccctgtactg +gagaactgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgttatgccttctgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccaaagaacaactggtttctttagaccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatatttctgtgtactctgtcctcgttattcac +caggcccataaaagacataatagggaagttaaagcccctcaatatcctcaacatcttagcctcatgtgattg +gaccttcgcaggtatcgtggagtccctgatactcttggcagagctcttt---ggggttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctgcaaggacctgaggaccttgcggtgga +gctcgtccccgtagtgatgggtggaattggtttggtactaggattcaccaaagagaaggttgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagacctcggtgcatatgggctagaaatcctaaagttggt +catgaagtggttcttcccgaaaaaggaggaagcaaatgaactggctatagtgagatctatcgaggatgcagt +cttggatctcgaggcaattgaaaacaaccacttgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaactcttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcgcctgacattgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctctctagtgcatcgggcgaaggaggaact +ttccagcagaccaagacctgtagtgatgatgatatcaggcaagccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcaacctcccttacaggagaccagcgcgtaggcctcatcccacgtaacggcgt +cgaccattgggatgcttacaagggggagagggttgtcctttgggatgattatggaatgagcaaccccgttca +tgatgccctcagattgcaggaactcgctgacacctgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactagactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactga +cactggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaagggtgtcatgaagaccctca +ccactggctccctcattgcccgggcatctgggttactccatgagaggttagatgagtttgagctacaaggcc +caaccctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgagaacaaat +atgggttgatggacacaatgagaattgggaaacagctcaagggtgtcaaaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaggaaatgccaaatagtgtatagtggttgcacttacatgcttgaatctgatg +gcaagggcaatgtgaaagttgacaaaactcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgccggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacttgtggt +ccaaaccacaagtggaaaacacagagga--------aaccaccaacaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatctcatccgacgacatcaagactgagggtaagaaagggaagaaca +aaactggccgcggcaagaaacatacagccttctcaagtaaaggtctcagtgacgaagagtacgatgagtaca +agaggattagggaagaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtagccattgccagggcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgaaaggaggagagagcttctctcggtctagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggatt +ataacgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattttgggtctccc-ctagcctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacctgagggcaccgtagttacactacttatcaag +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcaactatgaagatccaagggcgc +actgttgggggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gctcgcggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtaac +gacaaggggacatactgtggtgcacccatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcatccacagcaccactcccacccggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttaaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagactacttccagcggtcatccccac +cacatgcggaaaaacgattgctggaacggggaatccttcacgggcaagctggctgaccaggcttccaaagcc +aacctgatgtatgaagaagggaagagcatgaccccagtctacacagctgcactcaaggatgaattggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccgttgc +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgacgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcctgg-ttaaattctccc +cagaaccacattt-ggctcaggtagttgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcagtggaattctgtcgcccattgg +cttctcacactctgcgcgctctctgaagtcacaaacttgtcccccgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattaacagcaaagctc +agggagtatgggttgaaaccaacccgccctgataaaaccgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcctatacaattgatgtccctattgggggaggccgctcttcacggcccagcattctacagcaaaatc +agtaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgtttaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacggtttcttgccgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgtcgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgcttctaggtaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcaaaga------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acgaaatcgaatggctcgaca--------cgc-----------ggccacaaagccacagt +gctcactgggagcaccgactttactccaaaactgggtagaattcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtgacactgcccaccaaaatgaacctcaacagtggatgctcccaag +ttattcaggcagg-gacatt------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagctgctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaacccagacacaggtagggttttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacactggtcgacatgatttggttattccccctaatggttactttagatt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagtggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggtcgcttttccaccccc--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +taaatctt-----------ctaac------------tcttctactgtcactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcttaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----ttct---t-tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218670.1/1-7550 |Norovirus GII isolate NORO_212_17_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcagaatcttcaagtgacg---------------gagtgctttctagcat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaattgatt-------aaaaatgttcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcttgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgctatcagcctcgctaaggttgagttaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacctct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtactctgtcctcactattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcttcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgaactacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggacctcgaagcaattgaaaacaatcatatgaccaccttgcttaaagataaggacagtctggcagccta +catgagaacacttgaccttgaagaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaattaacgccctcctggcgagaatcgctgccgcacgttcgctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggcctcattccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagctcgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgataggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaggaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctccctcggcttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagcttgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctagaccaatc +agaactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcctctagcagctaggatggggacccatgcgaccatgaagatccaaggtcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggttattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggggaggctacacttgagggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggaatgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcctccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcagacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgttacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattctaggtacacgtaccactatgatgctgattac +t-cacgatgggattcaacacaacagagagccgtgttggcagcagctctagatatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacgaacctgtctcccgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggttcggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagtcaggtcactatgtttccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgctgtatacaccacttagagctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatattcct +agtgccacccacagttgagtctaggactaaaccattctctgttccagtcttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgtacgactgatggcgtactcctaggcaccacccaattgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggacctcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagagattccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacggt +gctcactgggagcgccgactttgctccaaaactgggcagagttcaatttggaa---------ctgacacaaa +caatgattt---tgataccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccaaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cctaatgttcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggtcattaatcaaaaagttgactttgaaaacaacaaaaatttg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaaattaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttcaacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggattc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtagtcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218671.1/1-7548 |Norovirus GII isolate NORO_213_16_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttataacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggaggcgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gcaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggtct +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattaccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcacta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +aaacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218672.1/1-7548 |Norovirus GII isolate NORO_214_19_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218673.1/1-7521 |Norovirus GII isolate NORO_215_18_12_2015, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccacagttaagatcgggaccaaaacgttaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagacttaacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtccacccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgcgcacttgggtcactattttc +aaaaccaatcaaggacctattgggtaaacttaaaccgttgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggcatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattacaggggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggtatggttctcggcttcactgctgagaagataggccgcatgtt +gtcgtccgccgcatcaacactgcgggcatgcaaagacttggggaattatgcccttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggagaccttaagggcgatcgaggacgccgt +cctggacatggaagctataggaaataaccacctcacaaccctcctcaaggacaaggatagcctcacggcctt +catgaagactctggatttagaagaggagaaagcaaggaaactgtccaccaagtcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaggaagaaat +gtttagcaggatcagacccgtggttgttatgatctcgggtagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctagtcccacgcaatggggt +cgaccactgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaaaccagacttttcccacataaaactga +ccctagccccacagggtggatttgacaagaacggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcggacaacaagt +atgggatcatggagacaatgagagtgggtacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaagggctctgtctctgttgacaaagttgaggaccaagcgtcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagccaggtactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgctggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagcgaacccga-----aaagg +aagtggcccaaggta---gatgggaggttgaacccaaggacatagagacagaaggtaagaagggtaaaaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgatgagttca +aaagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtctctt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagtcgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtgaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcaaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaggggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctctgccgccaggcacttatgagcctgcctacttgggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaagcccttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacttccagcggtagcccccat +catgtcaagaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgaacaggccaaacacgtgcagcccgtgtacacggccgcactcaaagatgagttagttaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggcacaatgatcagatgt +gccagggccttcggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtaccattatgatgctgactat +t-caaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactggatgttggcgacttt +gtcatctcagtacaggagggtctgccatcaggggtcccatgtacatcacagtggaattcaatagcacactgg +atcctgaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgacgatgagatcgtcagcactgacatcaatcttgatcccatgaagttgacacagaaactc +agagaatatggtctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaactggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgttgtcggccaacaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggtgagttcaccgtctcaccgaggaactcgcctgg +tgagatgctattaaatcttgaattgggcccagaactcaacccttacctgagtcacctgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaatattagtgcagctcaaataactatgtgcccccatgt +aattgtcgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaacaggttcttccatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctttacacccccctaagggc---caactc +tggtgaagatgtgtttactgtttcttgtagggttttgacccgacctgcccctgattttgaatttactttcct +ggtaccaccaactgttgaatcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ctccagg---ttcccagccccaatagatatgttgtacactgacccaaatgagggaatcgtagtccaaccaca +aaatggcagatgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaatcttgatggcacgcagtacgacccaactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcaggaca +-----ac---aagtggga---------gcaact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactggggtccattctcat---gt---------actcagagtc +ggaagactt---tgtgactggacagccggtcc---------------------------gcttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatagtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcataccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcactcatcaggtatgtcaatcctgacacaggcaggaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaataaccccattgttgtcccccctaatgggtattttaggtt +tgaggcttgggtgaaccaattttatactttgacccccatgggaactggtcaggggcgtaga---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgttggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagttaatcagaaagttgaatatgatttcaataaacag--- +------------------------------cttcaaatggcatcgtttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaaacagttgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattttggactggaatggc +accagatattgggcacctaacagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttct---cacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +cgattctg-----------ctagtgtatatagctttccttcctctgcttcctcac----------------- +---------------------aatcaaccca---ttcaacagtactgtcag-------cagg--------aa +ccgggtc----t---tctag-------------------gtccacctccacat---------ctacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaacgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------tcaacacacataggcagcctctcttcgccc +atctacgtagacgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttct-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218674.1/1-7559 |Norovirus GII isolate NORO_216_22_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaaacttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcatcgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccagcagccattagccttgccaaggtcgagctggcaccgctctctctgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactctcaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagaccaattaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggctgagacctgtcgtcgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgatacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaatggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +tagccctcaccactttcaacttcgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggtaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttagtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagagaccagctgaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcggcactggaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttaaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggaacccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccactcaccgaaatgagccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggcttacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggagcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218675.1/1-7548 |Norovirus GII isolate NORO_217_23_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagttacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagctttcatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218676.1/1-7548 |Norovirus GII isolate NORO_218_24_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaataacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218677.1/1-7548 |Norovirus GII isolate NORO_219_25_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----cactcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218678.1/1-7548 |Norovirus GII isolate NORO_220_28_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +ttttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaacgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218679.1/1-7548 |Norovirus GII isolate NORO_221_28_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagcctcctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218680.1/1-7548 |Norovirus GII isolate NORO_222_31_12_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagttcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtgatcctagctggaaatgcgtttacagc---aggaaagatagt +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218681.1/1-7548 |Norovirus GII isolate NORO_223_01_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218682.1/1-7548 |Norovirus GII isolate NORO_224_01_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaagccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218683.1/1-7548 |Norovirus GII isolate NORO_225_04_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctggcccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218684.1/1-7567 |Norovirus GII isolate NORO_226_06_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gcctcgagagacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaacgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaggatttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaagatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggaaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MH218685.1/1-7559 |Norovirus GII isolate NORO_227_07_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagtaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgctttgtctgaagtcaccaaactgtcccctgacattgtacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatgt +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagaggga +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaagagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MH218686.1/1-7548 |Norovirus GII isolate NORO_228_11_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +ttttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218687.1/1-7546 |Norovirus GII isolate NORO_229_12_01_2016, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgccccacagttaagattgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------atcgta +cagtttgatg----------cgaagtcggaaactgtgcgtgggctaccagatttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccctccattgagtgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcggcaataagcctcgcgacgatagaactcacacccatatctctttattg +gaggcccgtttacactccca---actatctggttcacccagatacgttgaaaggccttgctggtgagaagtt +cccctacacggctttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgatacatggct +cag---caggaagagcatctccaggaccaccggtttcttcaaaccatatcagtcttggaacaggaagcccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactattttc +aaaaccaatcaaggacttattgggtaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgattttgaattgcaggggcctgaggacctggctgtgga +gcttgtccctgtggtcatgggtggcataggaatggttctcggcttcactgctgagaggataggccgcatgtt +gtcgtccgccgcatcaacactacgggcatgtaaagatttggggaattacgcccttgacatactgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgatcgaggatgccgt +cctggacatggaagccataggaaacaaccacctcacaaccctcctcaaggacaaggatagcctcacggcctt +catgaagactctggatctagaagaggagaaggcaaggaaactgtccaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttacataaggctaaagaagagat +gtttagcaggatcagacccgtggtcgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaataccatgagcggcgaccagagagtggggctggtcccacgcaatggggt +cgaccactgggacgcctacaggggagagagggtggttttatgggacgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaaccctaaactgtgacaggattgagaacaa +gggaaagatgttcgacagtgatgtcatcataatcacaaccaatctagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtatatgcagagtcaccagaaattgagaaggtta +agaaagacttccccggccaacctgacatgtggaaggaccattttaagccagacttctcccacataaaactga +ccctagccccacagggcgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccttaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagagaagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagatctgaaagtcg +ccctgagggatgtgaagttcaatgagtgtgagataatctacaggaactccaaataccgagtctcttccaatg +gtaaaggctctgtctctgttgacaaagttgaggaccaagcatcccagactgcaaacgaagtgggtgcagcac +tcctcagacttaggcaggcaagagctagatactatgtcagctgcttccaagatctcatctacactctaatac +aggtcgctggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggta---gatgggaagttgaacccaaggacacagagccagaaggtaagaagggtaaaaaca +agaagggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgacgaggagtatgatgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaggaggccaagataagacaac +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggttcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtagact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttttgggtctcat-ccaacctcctaatcacaacaacacacgtccttcctaaggggattaaggaacttttt +ggagtcgaaatcaagcagattcaaattcacaagtctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcacgcatccatgaaaatacagggtaga +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgatatagttgtcgcgggtgtccacaccgcggca +gcccggggtggcaacactgtcatatgtgccactcaagggcaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaagcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaagacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagttaaagcccttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctattcccaagcatgtgcctcactggacaagaccacctccagcggtagcccccat +catgtcaggaaaaatgaccattggaatggtgaatccttcacaggcccccttgcagaccaagcatccaaagcc +aacctcttgtacgaacaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagttagttaag +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggtacaatgatcagatgt +gccagggccttcggcggcctcatggatagcatgaaggcaagctgcataaccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaaatataggtaccactatgatgctgactat +t-caaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctagcacccagccaactggatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgtacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccggatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagaatatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcactcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatagctgctcctgttgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaaccttgaattaggccctgagctcaacccttacctgagtcatttgtcccgcatgtataa +tggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgttagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacact---ccccgaatgagacttgtggctatgttgtacacacctcttagagc---aaattc +tggtgaggatgtgttcacagtgtcttgcagagtcctgacccgcccagcccctgacttccagttcacattttt +ggtaccaccaactgtggagtcaaagactaagccctttacactccctatcttgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtatactgatcccaatgaggcaattgtggtacaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccagctggtgcccacccaaatttgctcctt +taggg-----------------------------------------gcacgctgattagccag--------- +----------acgtcgaggtcc------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgtacagctgaagaacctcgatgggacaccatatgatccaacagatgaggtgccggc +agttctgggcgctatagattttaaaggaactgtgtttggggtcgctagtcaaa---ggaacaccacaggggg +-----ct---ctatagga---------gcgacc--------cgc-----------gcccatgaagtgcacat +agacactacaaaccctagatacaccccaaagcttggctctgtactgat---gt---------attctgaatc +cactgattt---tgatgacggacaacccaccc---------------------------gcttcaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-cttact------cttaatatgaacctggcccccgcagttgcccctgctttccccggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggcggcta------tgggt--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaagaggccgctccatcaca +gtctgcggtggctcttattagatatgtcaaccctgacactgggaggaacatctttgaggcaaaattgcatag +agaagggttcatcactgtagcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgatttcaataaacag--- +------------------------------ctccaattggcatccttcaaacatgataaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggaaatgatgaatataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgccgtaaacgcgccgatgacaaaaattttggattggaatgga +acaaggtatttcgccccaaatagcatgaagacaaccagttattcggg-ccagttttccagtaatcctgtgca +ta-----------ggcaacccactttgtcc---cgttctgactc---------------------------c +ccca-------------------aaattaaggctaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtttatagttctgcatctactgtttcctcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cgga--------gt +ctaaacc----a---tctag-------------------gccaacatcctctt---------ccacagcaac +ttctac-------------------tct--------------atctagaactagtgactgggtgagagggca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-cttttctt---t---tccttt +t------------cttt-----c------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218688.1/1-7548 |Norovirus GII isolate NORO_230_14_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218689.1/1-7562 |Norovirus GII isolate NORO_231_20_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttccaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agaaggtgtgtctgggctgcccaacctaacgactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagccggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtgcataaaccacctgctgcaataagtcttgccaaaattgaattaacacctctgtctctctactg +gagagtggtttacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggggagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggttctagacctcaacgactcctggct +cag---caggagaatgatccaaagaacaactggcttcttcagaccgtatcaggagtggaacagaaaaccttt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgtgctctctcctcactcttcac +tagacccatcaaggacatcattggaaagcttagaccactgaatattctcaatatactggcaacttgtgactg +gacttttgcaggcatagtggaatctatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctagccgtgga +actcgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacgcttagggcctgtaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtaagggccattgaggacgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcttggccacata +catgagaactcttgacttggaagaagagaaagcaaggaaactgtcgaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactagtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtaaaccgggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagattatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatagagaaggcta +agcgtgatttccctggccaaccagatatgtggaaggaccattacagatcagacttcacacacatcaaacttc +agctggcaccacagggaggttttgataaaaatggcaacaccccacacggcaaaggtgtggtaaagtctctga +cgattggttctctgatcgccagggcttctggtttactccacgagagaatggatgaattcgagctccagggcc +ctgacttgccaaccttcaactttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtctcatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatagaatctgatg +ggaagaacaaggttgtggttgaaaaggtgcaaaatgcaacagttcaaactaacaatgaacttgtaggggcac +tccaccacctgagaactgcaaggataagatattatgttaaatgcttccaagaagccatttattctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaagcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagatgaaggaggatgccccaggcccagg-- +-gat----gaaggtg---acctcactattgactctagggacattaaagtggaagggaaaaagggcaagaaca +aatctggccggggcaagaaacatacagccttctcatccaagggtctcagtgatgaagagtacgacgagtaca +agagaatcagagaggaaaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaagccactgaggaggacttctgtgaagaggaggaaatcaaaattcgccaga +gaatcttccgacccaccaggaagcagcggaaagaggagagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaaccagtgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaaaccaatc +agaccagacgtgagtggaatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcattaaa +aggacgacaggggagctgatgcctctcgcagtcagaatggggactcatgccacaatgaaaatccagggcaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggtcattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacaaggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacttactgtggagcccccattttgggacctggcaattcaccaaaattgagcacaaaaacaaaa +ttctggagatcttctaacgcaccgcttcccccaggtacttatgaaccagcatatcttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagatcaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgctcaagcttgtgcatccctcgacaagacaacttccagtgggtacccacac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaaacacatgcaaccagtctacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcgtttggtggtctcatggatgagctcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggccccataatatttgagaaacactccaggtacaggtaccactatgacgctgattac +t-cccgttgggactccacacaacagcgggcagtgctggaagcagcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggtttaccatcaggtgtgccttgcacctcacaatggaattctattgctcactgg +ttactcaccctgtgtgccctttctgaagtgactggattaggccctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagatataaaattggacccagagaaattgactgcaaaactc +aaagaatatggccttaaacccactcggcctgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcaattgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagaggcctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtc +agcaaactggtcatatctgaacttaaagaggggggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagaggacaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagtttacagtgtcagccagaaacgctcctgg +agaagttttattaaatctagagttgggccctgatttaaacccttatttagctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattactatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttcggaatacattcttccatta +taacaatcagcccacc---ggccgtatgagattagtggctatgctctatacccctcttagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcccactcctgattttcagttcacttattt +agtgccaccttctgttgaatctaagaccaagccttttaccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aacc---------------------------------------------------ta---- +-------gccgta----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaatctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcttcgtgtttggggtggcaagtcaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------agg-----------gctcatgaggtggtgat +ttcaacctatagtccccaatttgtccccaaattaggttctgtcaattttaaaa---------ttagcagtga +tgatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tggccatcaatgaagaagatgatg---------accacccgttcagacaatgggaactaccaga +ctattcaggggtg-cttacc------ttgaatatgaaccttgcccccccggttgcgccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gcgcaggaggtta------taacc--------- +--aaggtattgtagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcgccctccca +gtcagacgtggctctaatcaggtatgtcaaccccgacacggggcgcacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttgattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaggatagattttgaaaacaacaaacaa--- +------------------------------ctccagtttgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccataaaacaaggggttttagccgcaggc +ggcttttcccccactgatgcagcaaggggggccattggtgcacccatgacaaaggtgcttgattggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgcctagcccaaat---------------------------------g +ttc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctatagctccttcctcttcttctagt------------ag +t--gtcta-----------tagca------------tg-------tctactcaatcaactcatctaacat-- +----------ctggct-----cctctagtaa---------tgcttcttctgcctccacaaaattaacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagtagagtgggtgaaccaaca +gag---gagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacaccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------aataaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MH218690.1/1-7548 |Norovirus GII isolate NORO_232_20_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaaccgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacgtcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacgggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttccagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggcacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218691.1/1-7550 |Norovirus GII isolate NORO_234_25_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcgggacgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatgttcc +ccc-----------------------------tcccccacccaatgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggcgtgcacaaaccgccagctgctatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaagttgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacctct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcactgttcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcttcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggacctcgaagcaattgaaaacaatcatatgaccaccttgcttaaggataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaattaacgcccttctggcgagaatcgctgccgcacgttcgctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcggcctcccttacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccacgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagctcgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgaatccgatg +gcaagggcaatgtgaaagttgataggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacgagacctatggt +ccaagccacaagcggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaaacacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaggaggaggaagccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaggaggaaagagtctccctcggcttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaagaatagtcaactttggttcaggctggg +gtttctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctagaccaatc +agaactgatgtatcgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcctctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacagggtccaacgccaagagtatggacctgggtactacacca +ggtgattgtggttgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagcgaaggggaggctacacttgagggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcctccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaaaatcaagaagaggcttctttggggctcagacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattctaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgacttc +acgatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacgaacctgtctcccgataccatacaggctaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggttcggaaaactggagcaaagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttatgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgctggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagtcaggtcactatgtttccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataacttctatcatta +taatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagagctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtctaggactaaaccattctctgttccagtcttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgtacgactgatggcgtactcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagagattccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacggt +gctcactgggagcgccgactttgctccaaagctgggcagagttcaatttggaa---------ctgacacaga +caatgattt---tgtaaccaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtaacaccgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cataatgttcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaactccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggtcattaatcaaaaagttgattttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatttacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttcaacccct--------- +ca---------------------gccatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggacgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtagtcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218692.1/1-7502 |Norovirus GII isolate NORO_236_29_01_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aaatctgccaat +g------ac----agtaataatgccaccccttctaacaaagaagaggt------tggtacattctccaacat +taaagttggattcaagaaaa----tgctgggtgccgtacccaaaggtacc-------------aaagcaccc +agcagtga----------------tcagcattgccccacagttaagatcggacctaaaacattaacaatccc +ccc-----------------------------tgaacccccaaacgg------tgaggat------accgta +caatttgatg----------caaagtcagaaactataattgggctaccggacttgacaacggt---gcaaaa +cgaacacgaaaatactccatacactgtccccccattaagtgagagggagcacaggccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgatggcaaagc +tctgggagttcacaaaccaccggcggctataagtctcgcgacgatagagctcacccccatatcactctactg +gagacccgtctacaccccca---actacttggtctccccagacacattaaagggccttgctggtgagaagtt +cccctacacggcctttagcaacaactgttacaacttctgttgttgggtgcttgagctcaacgacacttggct +taa---cagaagatgcatctccagaactaccggcttctttaaaccataccagtcttggaataggaaacctct +cccaactatcgatgatggaaagattaaaaaggtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagatctattaggcaaactcaagccattgaatctactacacttgctcgcgtcttgtgattg +gacgtttgcgggtatggtggagacagtcatcttaatggcggagcttttc---aatgtcttctggactccgcc +agatgtctccaatttcatagcctccttgataggtgattttgaattgcaagggcctgaagatttggctgtgga +gctcgttcccgtggttatgggtggcatagggatggttctcggcttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattagt +catgaaatggttcttcccaaagaaggaggagaaagctgagatggagaccttgagggcgattgaagatgctgt +ccttgatatggaagctatagggaataaccacctcacaaccctcctcaaggacaaagacagcctcacagcttt +catgaaaaccttggatctagaagaggagaaggcgaggaaactgtccactaaatcatcttcgccggacatagt +cggcaccattaacgccatactagctaggatagctgctgctaggtccctactacataaggccaaagaggagat +gttcagcaggatcagaccagtagtcgtcatgatctcaggcagacctggcattggaaaaacccacatggcgag +acacttggctaagagcatcgccaacaccatgagtggcgatcagagagtcggactcgtcccacgcaatggtgt +cgatcactgggacgcctacaggggagagagagtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctgacactgcaagaattggccgatacgtgtccagtcactttaaattgtgataggatcgagaataa +ggggaagatgtttgatagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgatttcctggtctatgcagagtcaccagaaattgagaaggtca +agagagatttccctggccagcctgacatgtggaaagatcatttcaagccagacttttcccacattaagctga +ctctagcccctcagggcggttttgacaaaaatggcaacaccccacacggtaagggcaccatgcggtccttga +cccaggggtccctaactgcgagagttgcaggccttgtccatgagaggagggatgagttccagctccaaggaa +atgacctccaaacatacaattttgacaccaacagagtctccgcatttaggaaattggccgcagacaacaagt +atgggatcatggagacgatgagagttggcacagcactcaagagtgtgaagaccttggaagatctcaaagttg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagagctctaagtaccgagtctcttccaacg +gtaaaggctcagtctctgttgacaaagttgaagacaatgcttcccagactgtgaacgaggtacactcagcac +tcctcagactcaggcaggcaagggccagatactacatcagctgcttccaagacctcgtctacactcttatac +aggttgccggggcatcatttgttgtca---------------gtagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgaggc-------------ccaggaggtgaatgagttcga-----aaagg +aagcggcccaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggcaagaaacacacagccttctctagcaaaggtctgagtgatgaagagtatgacgagttca +agaggatcagggaagaaagaaatggaaagtactccattgaggaatacctgcaggaccgagaccgctat---t +atgaagaagtagcagttgctcgggcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaggaaacagaggaaggaggaaaggggcgtgcttggcttggtcaccggctcagaca +tcagaaagaggagaccagacgatttccaaccaaaaggtaacctgtgggcagacgacaccagaagtgtagact +acaatgaaaggcttgattttgaagcacccccgagtgtctggtcaagaatagtcccattaggcactggttggg +ggttttgggtttcat-ccaaccttttgatcacaacaacacacgtcctgcctaaagggattaaggaactcttt +ggagttgaaatcaaacaaattcaaattcataaatctggagagttttgcaggtttagattcccaagacctatc +aggccagatgttacaggactcgtgctggaggagggcgccccagagggcactgtctgttctgtactcgtgaaa +agacccacaggtgaaatgatcccccttgcagtgaggatgggcacacacgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgcttctcacaggagcaaacgcaaagaacatggatcttggcaccggccct +ggtgactgcggttgcccctacatctacaaacgtggcaacgacattgttgttgcgggcgtccacaccgcagca +gcccggggaggcaacactgtaatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gatcttggtacctactgtggtgccccaattctgggccctggtaaggcgcctaaactcagcacgaagaccaag +ttctggcgctcatcaccagatgccctgccacctggcacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggcccctccctgcaacaagtcatgagagaccagttgaggccctttacagaacccagaggc +aagccacctagacctgcaatcttagaggaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgccaagccatggtcctattcgcaggcatgtgcctcattggacaaaactacctctagtggtagtccccac +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccccttgcggatcaggcttctaaagcc +aacctcatgtatgagcaggccaaacatatgcagcccgtgtatacggccgcacttaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctctctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgacttt +gtcatctcagttcaggagggcctgccatcaggagtcccatgcacatcacaatggaattcaatagcgcactgg +atactcactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgttcaagctcactcttgtttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttaacacaaaaactc +agggagtatggcctggttcccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttccttcgtaggtcgattgctcgggacccagctggctggtttggaaaactagaccaagattca +atcctcaggcaactgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattcc +cagcgggccacacaactcatggcccttcttggtgaggcctcgttgcatggtcctcaattttacaagaaagtt +agcaaaatggtcatcaatgaaattaagagtggtggtctggagttttacgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagccccatctac---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaggctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgagattttgcttgatttggagttggggccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgctggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccccccagggttcccatatgaaaatttgtcaccttcacagatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaataacttcttccatta +caatcagggcaatgac---ccgaaattgagattgatagctatgctctatacccctctaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---tttccagtgccagtggaaatgatgtatacagccaggaatgagaaccaagttgtgcaaccaca +gaatggtagggtcacacttgatggtgaactattaggcaccacacccttgctggctgtcaacatctgcaagtt +caagg-----------------------------------------gggaggttattgctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcactccaattgaccccacggaagacacacctgg +tcccattggttcacctgactttcaaggtatactttttggcgttgccagccaac---gcaacaagaatga--- +------------acaaaa-----ccccgccacg--------aga-----------gcccatgaagccaacat +taatactggtggggaccaatatgcccccaaattggcccaagtgaaatt---ct---------tttcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acaact---------cccaccctttcagacagtgggtcctgcctcg +atacggcggacat-ctcacc------aacaacacccacttggctccagcggtggcccccctgtttccaggtg +agcagattctgttctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggctacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaagtggcactcataaggttcattaacccagacactggcagagtcctctttgaggccaagttacacaa +gcaaggctttataactgtggctcatactggtgataacccaattgtcatgccaccaaatgggtacttcagatt +tgaagcctgggtcaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcacttataaatgctgg---ggctaatgctattaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctctcatgataaagaaatgctccaa +gctcaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctctcccacggatgccgcgaggggttcagtcggcgcaccaatgacaaaattagttgattggagtggc +actagatattgggcacctggtgccatgaggacaactggctattcagggacttttactcatttgccccctgtg +ca-----------gtctgcttcatatgtca-----------aca---------------------------a +tcaaagta--------------gacaacctcttaaag----------------------------------- +----------------------------------------tagattctcctcctcc---------------- +---ttctt-----------cgagtag------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcaactaccctctcagg-cacctcaag--------gg +tgggctc----a---tcatc-------------------tcagtcgaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---aaggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agta------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgatta---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218693.1/1-7548 |Norovirus GII isolate NORO_238_17_02_2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatc +ttttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgtcccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatctcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactctaaagtgaaaaaggtggccaatgttgttctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggacgcagt +gctagatcttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaagaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgtcttaatgatttcagggaaaccgggtataggaaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttagccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacatataaaattgg +cattggccccgcaaggaggttttgacaagaatggtaacactcctcacgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgaatctgatg +gtaaaggcaatgtacacgtcgaaaaggtgaacaacaccagtgtacaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcataaccacgcgcattgcaaagcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaatctgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaagatccgacaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggggcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggaggtcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggtccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaaaaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-ttaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggacgtgggtgatttc +aggatatcaatcaacgagggattgccctctggtgttccctgtacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttt +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaactgacagcaaagctg +agggaatacgggcttaaaccaactcgccctgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagctcctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaattgggcccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccagttgacaatttgagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtatcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagataaaacccttctccctccctatcctgactatctctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatgttgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaactcctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcacccctaagttaggctcattagagatatcc------------actgaatc +tagtgattt---tgaccaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatgggccctacccga +ttacgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagattgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagctaagaatggtgattctccaataactgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggagtgga +acgagaaactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtacacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattagatttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218694.1/1-7547 |Norovirus GII isolate NORO_31_11_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggtaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagcacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctatctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agtttaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218695.1/1-7574 |Norovirus GII isolate NORO_32_19_06_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcaggccctatcaggactggaataggaaacccct +tcctactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctcttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaggttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccatg----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagactaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgtcactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttcc---------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaa------------------- +------------------------------------------------------------------------ +- +>MH218696.1/1-7548 |Norovirus GII isolate NORO_34-6_05_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gggtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccacca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------ccccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgatttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactattt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaactggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgtcgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtctcatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtacttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaaaaacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagcgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttaccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggaggccttcacaggaaaactggcagaccaagcgtcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagttaag +actgataagatctatggtagaatcaagaaaagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccatcgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaacaaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccattttcactccctattctgactatctctgaaatgtccaa +ttccagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcactggat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccagggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcacccctaaactaggctcactagagatttcc------------actgagtc +tcatgattt---tgatcaaaacgaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgacaa------------tgaggcacactttaaacaatgggctcttcccaa +ctatgctggccag-atcacc------cataacatgaacttagccccagctgttgctcccaactttcctggtg +agcaactccttttcttccgctcacagttgccat------cctctggtgggcgg-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggctaagctgcacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctattaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacttcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtacacagacccacaccaaat---------------------------------t +ttagaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgagatca +aattcaacccaagtcac--taacctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcca--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccacatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218697.1/1-7545 |Norovirus GII isolate NORO_34-7_30_10_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccgcccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaatcaaagggagaacagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatctaccattatggcctgtacgtggaacgaggccttat +actcggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttattctg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggagattacatggagagttatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatatttttgtgcaccttatcttcactattcac +cagacccattaaggacataataggaaaattgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaagggcctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgccgcatccactttaagagcttgcaaagatcttggtgcatacggactggaaattttgaaattggt +catgaagtggttcttcccaaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgatatcgt +gggcacaatcaactctctactggcaagaatcgctgctgcacgctctctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacccgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctagctaaaaagatcgcgtcctccctcacgggggaccagcgcgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaaaggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctacaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagatgctcctggggtggagaaggcaa +agcgcgacttcccaggccaacctgacatgtggaaggacgctttcaatcctgacttctcacacataaaactgt +cattagctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccaccggctccctcatcgcccgggcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggatgatggacacaatgagagttggaagacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgagggttgacaaagtacaaagtaccactgtgcaaaccaataatgaattagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgttaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaagtggaagacacagaaga--------gatggttaacgaagatggttgcccaaaactcaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaaacacacagccttctcaagcaaaggactcagtgatgaggagtacgaggagtaca +agagaatcagagaagaaaggaacggtaagtattccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +ggatttttagaccaacaagaaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttccgaaa +tcaggaaaagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaactttgaggccccaccaagcatatggtcgcggatagtcaactttggttcaggttggg +gcttctgggtgtccc-ccagcctgtttataacttcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaaatcaggtgaattctgccgactgagattcccaaaaccaatc +agaactgatgtggcgggcatgattctagaagaaggcgcgcccgaagggaccgtggcaacactgcttatcaag +agaccgactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgattacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aataaaggaacatattgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagttgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaggcctgcgcatcccttgacaaaaccacctccagtggccacccgcac +catatgcggaagaacgactgttggaatggggattccttcacaggaaaattggcagaccaggcctccaaggct +aatctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcactaaaagatgaattggtgaag +actgataaaatttatggtaagatcaagaagagacttctgtggggctcagatctggcgaccatgatacggtgt +gcccgggctttcggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatctttgagaagcactccaggtataaatatcactatgatgctgattat +t-cccggtgggactcaacgcaacaaagggatgtgctggcagcagcactagaaattatgg-tcaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagatctcctttcccctagcgttatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaattcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggatccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagatctggat +ggcctaacattccttcggaggactgtgacccgtgacccagctggctggtttggaaaactggaacaaagctca +attctcaggcaaatgtactggaccagggggcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccgacattttatagcaaaatt +agcaaattagtcattgcagagctgaaggaaggtggcatggacttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggacaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgttattgaatctagagttgggtccagagttaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +ctttgccgccgtaccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgtttccccatgt +gattatagatgtgagaactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaggatgat---cctaagatgagaattgtggctatgctttatactccccttaggtctaatggctc +aggtgatgacgtgtttacagtctcatgcagggtgttgactagaccctcccctgattttgatttcacatattt +ggtgccaccaacagtggagtctaagactaaaccattcaccctcccaatcctcacgcttggggagctctccaa +ttctaga---tttccagtgtccatagaccagatgtataccagccccaatgaagttatatcagtgcaatgtca +aaatggtaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcctt +caagg-----------------------------------------gagaggtgaccgcccatttgc----- +----atgacaat-------------------------------------------------------g---- +-------accatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgattttcagggaagggtcttt--ggtatcatctccca---aagagacaaacacaat +agcc-ct-----ggacatagtgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcaaattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggac---------ttaatgacactg---------aacattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtttttccagggg +agcgcctgctcttttttagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagctattgattgtctgctaccacaagagtgggtgcaacatttctatcaggaagcagctccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacaacaaaattctttcaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggagtcttgaccgctggc +ggcttctcccccgctgatgcagccagaggtgctgtgaatgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagattcacatcaa----------- +-------------------------------ctgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccaacacacccagagccggccttcgag------------tgg +c---tctt-----------ctgtg------------tcctcctttactactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacataa------cacggtttc------------------------at +caaattc--------aactcgcagcacaaacctctcccaatcaacggtttctag---------------ggc +tacatc---------------------------------------taggacaggtgagtgggttagagatca +aaataaaaatttggaaccttacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcgtct------g------------------------------atggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggt---------- +---a-a-a-t-ttattt---aga---at--------------------------gaat--------tgatt- +---------------tt---atcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>MH218698.1/1-7571 |Norovirus GII isolate NORO_38_09_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcccactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgctcctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatattacagtggcttacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagactaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttcc---------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MH218699.1/1-7560 |Norovirus GII isolate NORO_39_26_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggtaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatgt +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaactg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218700.1/1-7571 |Norovirus GII isolate NORO_40-1_01_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggtaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatgt +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcgccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>MH218701.1/1-7546 |Norovirus GII isolate NORO_42_01_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +agg---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccgggttgcctgagctcaccactgtcagacaacc +ggaggaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcaaagaacaacaggtttcttcaggccgttccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +taggcccatcaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttgaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaataa +agggaaagtctttgacagtgatgctataattatcaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgattaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaaggtaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaaatactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgaaaaactcaactttgaggccccaccaagcatctggtcgcggatagttaactttggttcaggctggg +gcttctgggtttccc-ccagtctatttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-agcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattccttcggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcctaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggtgaggctgcgctccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccaggcaagagcctatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggagatgatgtctttacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcagaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacgga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggtgctt------------tcaacacgcacaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------t----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218702.1/1-7517 |Norovirus GII isolate NORO_43_02_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggatgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +aggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtagtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttttgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaattatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgatttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccttacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtctcttgccgagttctctcgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaagaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctaccgctactt-------------------- +----------ctgtat-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcctacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218703.1/1-7552 |Norovirus GII isolate NORO_45_31_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcccactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgctcctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatattacagtggcttacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagactaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttcc---------t-tt----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218704.1/1-7569 |Norovirus GII isolate NORO_46_24_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctgacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgtcttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcctactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaaaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccgacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgctcctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatattacagtggctcacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagactaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tcttcc---------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>MH218705.1/1-7563 |Norovirus GII isolate NORO_47_29_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggtaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcgatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>MH218706.1/1-7568 |Norovirus GII isolate NORO_48-1_01_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgagggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtt-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggattgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcattcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctattagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacacggagagtcatt +cccctacactgcatttgacaacaattgctatgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaattgctgctgcacgctccctagtgcatcgggcgaaggaagaact +ctccagcaggccgagacccgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +agagctggccaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacctgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaagcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggctttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaacttcgaccgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagtaggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtagcacctatacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactacgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggatagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaagccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgctaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgacgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcattaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgcggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttctggagatcatccacaacgccactcccacccggcacctacgaaccagcctacctcggtggcaaagatccc +agggtcaaaggtggcccctcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggtcacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttagtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctagcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatatttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tctttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccctgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgctggtggttttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataacgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacctacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcttttgttgtccaaccaca +aaacggcaggtgcacgactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttaaaa---------ctgacacaga +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtgacaccacccaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcagg-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactccttttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcacttctatcaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttagttgtccccccaaatggttattttaggtt +tgattcctgggtcaaccagtttcacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaaacatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcgcaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggatgct---------------------------------g +ccaggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +caaatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgagggtca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>MH218707.1/1-7517 |Norovirus GII isolate NORO_49_15_10_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaagatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagtagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttattctg +gagacctgtatacacccccc---agtatctcatctccccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtattagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagatctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctttgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaaaaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcgagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacacggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcagagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgtgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatggagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggcgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgtttccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcatgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +tcctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatttggcccccgctgtagctcccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgaggcagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218708.1/1-7568 |Norovirus GII isolate NORO_50_30_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttggacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctctcctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaaat +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacacacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>MH218709.1/1-7517 |Norovirus GII isolate NORO_52-1_16_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggtaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacacacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218710.1/1-7517 |Norovirus GII isolate NORO_53_19_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacagctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaatcctggaaatgtgggacggggaaatctaccattatggcttgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +tag---tagaagaatgatccagagaacaactggtttcttcaggccctatcaggactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctatcctcgctattcac +cagacccataaaagatataatagggaagataaggcctctcaatatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgccgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttctttccaaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaggataaagacagtctggcgaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcaccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacacgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggctcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggatctgggcactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggttattggagtccacacggctgcc +gcacgcgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcattgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgac +ccacctgagaaatggacgtttgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagagacattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccaacattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggaatgtcgcccata----------- +-----------ctacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacata----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctatagt +gctcactgggagcgccgattttactccaaaactgggtagagttcaatttcaaa---------ctgacacaga +caatgattt---tgaaactaaccaaaacacga---------------------------agttcaccccag- +--------tcggtgtcatccaaaatggtggcaccacccaccaaaatgaacctcaacagtgggagctccctag +ttattcaggcaga-gatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccgtacccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccgacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tgtaatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcattccaatttggcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaaattaaacaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcaggggcact---------------------------------g +ccaggaa----------------gagttaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatcct-----------ctaac------------ccttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +accttcgtaagcgaggggagtcacg--------ggtgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218711.1/1-7551 |Norovirus GII isolate NORO_54-1_08_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgttagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gaggcctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggttgagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcttaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcttaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccgttgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggtttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccacgtcataccccaaggcgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +aggactgatgtgacgggcatgattctagaagaaggtgcgcccgagggcaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcgtcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaaggcctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatgt +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacagagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcagcttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gaacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaaggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-aat-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MH218712.1/1-7555 |Norovirus GII isolate NORO_55_15_02_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatatagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcaacattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagagggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctgcaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccccggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataattaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacggacttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccagggggccaaatcatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaacccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacactagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggagcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaaccac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgcttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MH218713.1/1-7517 |Norovirus GII isolate NORO_58_25_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcctactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaatgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgttttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgctcctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatattacagtggctcacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagactaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgttactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------g----------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218714.1/1-7513 |Norovirus GII isolate NORO_58-1_13_10_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaaacttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcgggacgcggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacccactccagaactggtt-------aagaacatccc +ccc-----------------------------tcccccacccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------ccaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactgggacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagttggcaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatctctccagacaccctcaagagattgtccggagagacgtt +cccctacacagcctttgataacaactgttatatcttttgctgctgggttctggacctaaatgactcgtggtt +gag---cagaaggatgatccagagaacaactggtttcttcaggccctatcaggactggaataggaaacccct +tcctactatggatagctccaaaataaagaaggtggctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatttaatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctagtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcaat +cctggatctcgaggcaattgaaaacaatcacatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgatcttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaggccaggaatagggaagacccacctcgccag +ggaagtggccaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaacggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctctgggacgattatggaatgagtaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgatagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactat +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggcttctccatgagaggttggatgaatttgaattgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggcagcacttacatgcttgagtccgatg +gcaagggcaatgtgaaagttgacaaagtccaaagcgccgctgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtccgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gaccaccagtaaggacgggtgcccaaaacccagg-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaattca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggact +acaatgagagactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccaccggggagctcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +gctgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgctccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgactccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcgcactgtgtctctctccccatcagagttggcatg +aacatgaacgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacaatt-ggctcaggtagtcgcggaagacctcctttcccccagcgtggtggacgtgggcgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggttat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagtccttacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------ttgaatttggcttctcaaaattggaacgattatgacccaacagaagaaattccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagtgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaacctctacagtgggtgctccctag +ttactcaggcaga-agtact------cataatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acacggatttggactgcctgctcccccaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttactttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtccttgctggattggcatctgatgtccttagctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaacaattgattttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgagaccaccaaaaagctacaacaggaaatgatgaaaattaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggcactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccccgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgtctctt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggctcacaatatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218715.1/1-7566 |Norovirus GII isolate NORO_59_08_07_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggatgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +aggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtagtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttttgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaattatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgatttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccttacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtctcttgccgagttctctcgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaagaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctaccgctactt-------------------- +----------ctgtat-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aattgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcctacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>MH218716.1/1-7536 |Norovirus GII isolate NORO_60_28_09_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcctactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcatcacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggttaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttcttacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------ttgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagctccataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagaccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgtcactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218717.1/1-7548 |Norovirus GII isolate NORO_63-4_07_10_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggccgtctcttttaaacggg----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccacca +agg---------------------cccccaagaccacccacaccagaattggtt-------aaatcaatccc +ccc-----------------------------ccccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------ctga---aaagggtgtctctggtttgcctgaactcacaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatacgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccctttgtctttgtattg +gagaccagtgtacaccccac---aatatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtacttgatttgaacgactcatggct +gag---cagaaggatgatacaaaggacaacaggattcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatattgtcctctgtgccctctcagcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacgtcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaaatcggcaaaatgct +ttcatcagctgcctcaacccttagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaactggcaatggtgagatccattgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggacattgt +gggcacaataaatgccttactatcaaggattgcagctgcccgatctctagtgcacagggccaaggaggagct +gtcaagcaggccccgaccggtcgtcgtgatgatttcagggagaccaggtatagggaaaacccatttagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtctcatcccacgcaacggagt +tgaccactgggatgcatacaaaggtgaaagagttgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagacttcaggagctcgctgatacctgtcctcttacactcaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaggttgagaaggcta +aacgggactttccaggccaaccagacatgtggaaagacaccttcaaacctgatttctcacacataaagctga +cattagctccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgaatatgagctgcagggcc +caacccccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcaacttgctgctgaaaacaagt +acggtcttgttgacacaatgagagtcggatcacagctcaagaatgtcaagaccatgacagaacttaagcagg +ctctcaaaaacatctcagtcaagaagtgtcagcttgtgtatggtggtggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccaatgtgcaaactaacaacgagctctccggagctt +tgcaccatctcaagtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcactacgcgcattgcaaggcgcacaa------acatacaaaacctctggt +ctaaaccacaagcagaaaatctggagga--------gactaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgaag---agtttgtcatctcctctaatgacatcacaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +aaagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggagcgttgact +acaatgagaaacttagttttgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggctcaggttcccaaaaccaatc +aggacagatgtcacaggtatgatcttggaggaaggtgctccagaaggcaccgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagaatatggacttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaatgactacgtggtcattggagtccacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaggccatgttagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggtcctggaaatgcacccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccctttgccacccgggacctatgagccagcttatctgggcggcaaggatcct +agagtaaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagcgtgctagaagctgccaagaggactataatcaatgtgcttgaacaaacaatagac +ccaccccaaaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttctagcggccaccctcac +cacatgcggaagaacgattgctggaatggggaggccttcacaggaaaactggcagaccaagcgtcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtttacacaggagctctaaaagatgagctagttaag +actgataagatctatggtaaaatcaagaaaagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacgctaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcggtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaggtggttgcagaggacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggtgttccctgcacctcacaatggaactccatcgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaactggacccagagaaactaacaacaaaattg +aaggaatacgggctgaaaccaacccgccctgacaaaacagaaggacccttaattatctctgaagacttggat +ggcctgaccttcttacgtagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaagggaccaaaccatggggatccctccgaaacaatgataccacactcc +caaagacccatacaactgatgtcattgttgggtgaagctgcgttgcatggtccatcgttctacagcaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaacccctatttggcccatcttgccagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaacttttcaattgacaacctaagtgcggcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaacagttc +tggagatgatgtttttactgtgtcttgcagagtgctaactagacctagccctgatttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaaccattttcacttcctattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagtcccactgagaatattgttgtccagtgtca +gaatgggcgcgttacccttgatggtgagttgatgggctccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcattggat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaactccttatgaccctgcagaagatataccatg +ccccttagggataccagatttccagggcaaagtctttggtgtggccagccaga---gaaa------------ +-----tc------------ctgacaccacaact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgtttcacccctaaactaggctcattagagatttcc------------actgagtc +tggtgattt---tgatcaaaacgaaccaacaa---------------------------gattcaccccag- +--------ttggtattggggttgacaa------------tgaggcacactttaaacaatgggctcttcccaa +ctatgctggccag-atcacc------cataacatgaacttagccccagctgttgctcccaactttcctggtg +agcagctccttttcttccgctcacagttgccat------cctctggtgggcgg-----tcca---------- +--acgggatcctggactgcctggtcccccaagaatgggtacagcatttctaccaagaatcagccccctccca +atctcaagtggccctggttaggtatgtcaaccctgacactggcagagtgttatttgaggctaagctgcacaa +attaggtttcatgactgtagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaacagggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaacactgta +gggtctttagttaatgcagg---ggctaatgctattaatcagacaattgattttgaaaataataaatat--- +------------------------------ttgcagaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaacggg +acgagatactgggcaccaggcgccacctccacaacttcgttgtcgggtggcttcaca-aatca--------- +aa-------------ccgtacacagacccacaccaaat---------------------------------t +ttagaac----------------gggccaggctcccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaagtcac--tagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcca--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctccaa---------------------------------------cagaactagggactgggtcaaccaaca +aaatttcaatttggaaccatatatgc---ctggatctcttaggacagcttttgtcactccaccatctagcac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacacgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------at-ttaaaattaggtttaa-tct- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218718.1/1-7546 |Norovirus GII isolate NORO_68-6_28_08_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccgcccaacgg------ggaagatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaaaccaacacagccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagccgccatcagccttgctaagattgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagatgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctgaatgactcgtggct +gag---cagaagaatgatccagagaacaactggtttcttcagaccctatcaggactggaataggaaacccct +tcctactatggacaactccaagataaagaaggtagctgacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttggcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gcttgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccaaagaaggaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacagtcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcgtcccacgcaatggtgt +cgaccattgggacgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgactttctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctctctcattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggctgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaagccctgtattccatcgtcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagtaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtacaacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagcatcacttccacctggtacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctggat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccatttagccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggttaccatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---tccaccattaagctgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttcttacaagaccatcccccgattttgatttcatattttt +ggtgccccccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------ttgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggcagcaccacccaccgaaatgaacctcaacagtgggtgctccctag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctttgctgagatttgtgaatccagacacaggtagggttatgtttgagtgcaagctccataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctgtctttgctggattggcatctgatgtccttagctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaacaattgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgagaccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgtcactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tctttc---------t-tt----t-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218719.1/1-7550 |Norovirus GII isolate NORO_68-7_18_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcctaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgcccctcatttaaagtcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccttacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacatggct +tag---taggagaagcatctctaggaccaccggcttcttcaaaccacaccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttgggtcactgttttc +aaaaccaatcaaggacctattgggcaagcttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgtt +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaattagt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggataaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +tggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgttccacgcaacggggt +tgatcattgggatgcctacaggggagagagggtggttttatgggatgattacggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacaaggtgggtttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acaaccttcaaacatataactttgacaccaacagagtctctgcgtttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagctagatactatgtcagctgcttccaagacctcgtctacactctaatac +aggttgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccagggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatattccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcggttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaaggccggacgactttcaaccgaagggcaacccgtgggcagacgacaccaggagcgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcaggttcataagtctggggagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacccacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaaaaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggagaaaggaccatccctgcagcaagtcatgagggaccagctaaaacccttcacagaacccaggggt +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaacgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggaccttggtacaatggtcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcgcactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttattcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctt +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagttgtactggacaaggggccccaaccatgagaacccatatgagagtatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtacaa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaataggttctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgactcgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgctgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtataccccaaaacttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaactgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgttaaccctgacactggaagaagcatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgctgcaa +tcacaagtactggccactaaacagctccagcaggagatgataaacataaggcaaggggttttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctacatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------gtctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218731.1/1-7498 |Norovirus GII isolate NORO_92_31_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacagaacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agatggtatctccggtctgcctgagctatccaccgtcaggcaacc +agatgggacaaacacagcatttagtgtccccccactcaaccagagggaaaacaaagatgctaaagaaccgct +gcctggcaccatcttggaaatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttttgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccaccatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgcaatgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccctaaacatgctcaatatactagcttcctgcgactg +gacttttgcaggaatagtagaatccctgattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaagttgtt +catgaagtggtttttcccgaagaaagatgaggcgaatgaacttgcaatggtgagatccattgaggatgcagt +gctagacctcgaagcaattgagaacaatcacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgaagactctggaccttgaggaggagaaagctaggagactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcatcgggcaaaagaagagct +ttccagcaggccaagacccgttgttgtcatgatatcaggaaaaccagggatagggaaaacccaccttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccactgggatgcgtacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccatcca +cgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcacaactaatctggctaacccggcaccactggactatgt +taattttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgatgttgaaaaagcaa +aacgcgacttcccagggcagcctgacatgtggaaggatgcttttagatctgacttctcacacataaaattga +tgttggcccctcagggtggttttgataagaatggcaacaccccacatggaagaggtgtcatgaaaaccctca +catctggctccctcattgcccgtgcttcaggactcctccacgaaagactggatgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacggcttgccgctgaaaataagt +acgggctggtggacaccatgagagtaggaagccagctcaagaatgtcaagactgtgtcagagctcaaacagg +cacttaagaacatttcaattagaaggtgccagatagtctatggtggtctcacctattcacttgaatctgatg +gcaaaggtaatgtgagggttgagaaggtacaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccacctaaggtgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtagaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagctgaaggtaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgatgaggagtatgatgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaggaggccaagatccggcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggtttcactcggattggtcacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaagctcagttttgaagctcccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttataacatccacccatgtcatacctcaaggggcacaagagttcttc +ggtgtttccatcaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccaaagccaatt +agaactgatgtgacaggtatgatcctagaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactagcggctagaatgggcacccatgcaactatgaagatccaaggccga +actgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggcactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggttatcggggtccacacagctgcc +gcccgcggagggaacactgttatctgtgcaacccaaggcagtgagggcgaggccgttcttgaaggtggtgac +aacaaaggcacctattgtggcgctccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggtaaagacccc +agggtgaaaggtggtccctcattacaacaagttatgagagaccaattgaaaccgtttacagaacccagaggc +aagccaccaaagcctagtgtattggaagcagccaaaaagacaatcattaatgtccttgagcaaactatagat +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacagggaagttggctgatcaggcttcaaaggct +aatttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaggatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggctcagatctggcaaccatgatccgttgc +gctcgagcgttcggagggttgatggatgaactcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgggaaacactctaggtacacctaccattatgatgcagactac +t-ctcgatgggactcaacacagcagagagccgttttagctgcagccctggagatcatgg-taaagttttccc +cagaaccacacct-ggctcaaattgtcgcagaagacctcctatctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaactccattgctcattgg +cttctcacgctctgtgcgctctctgaggtaacagatttatctcctgacatcatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacggccaaacta +aaagagtatggtctcaagccaacccgcccggataagactgaagggcctttggtcatttctgaggacttagat +ggtctgaccttcttacggagaactgtgacccgtgatccagcaggttggtttggaaaattggaacaaagctca +atactaagacagatgtattggaccaggggccccaatcatgaagacccctctgaaacaatgataccacattcc +caacgacccatacagttgatgtccctattgggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaagacaagagccaatgttc +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtgccagaggtcaacaacga +gacgatggcacttgagccggtggctggggcttctatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttaaatttggaattaggccctgaactaaatccattcctggcacacctttcaagaatgtataa +tggctatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacatttccctcttgagaatctgagtcctggtcaaattacaatgttccctcacgt +gattattgatgttagaactttagaacctgtcctcttgcctttaccagatgttagaaataatttctttcatta +caatcagcagcctgag---ccccgtatgagacttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtctcttgtagggtcctcacccgcccctctccagattttgattttaattattt +ggttcccccaactgtggaatctaaaactaaaccatttaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtgccaatagatgaattgtataccagccccaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggcaccacacaacttgtgccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcattaacgcccgagtgccagac--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaacgcaaatgggactcccttcgaccccactgaagatgtccccgc +accattgggcacgccggatttcctggcaaacatctacggagttactagccaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gcccatgatggggtctt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggta---------cttgggaaga +acatgatct---tgatctcaatcaacctacca---------------------------gattcacacctg- +--------ttggttt------------------gtatgatacaaaccactttgatcagtggattctacccaa +ctactctggaaga-ttgacc------ttaaacatgaatttggcgccctccgttgctccccttttcccaggtg +aacaaatactcttctttaggtcccacatacca-------cttaacggaggtac-----ttcca--------- +--acggtgccattgactgtctactccctcaggagtggatccagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctttttgaggccaaactacatag +acagggatttatcacagtagcaaattctggttctagacctattgttgtcccccctaatggctattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcaggtcttgccggtgatataatcaccaatagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgataaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcgattaatgcgcccatgacacaagtcttggactggaatggg +actaggtactgggcccccggggccaccaaaacaactgtcttctccggtgggttcacaagctct--------- +cc-------------caataccaggactgttgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acgcctatatc--taggcctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttcttcga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgctgcaaactgcttacgtgacgcctccctctagtag +agcatcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------tt--tttct----t-------------ccattc--------tt---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MH218732.1/1-7548 |Norovirus GII isolate NORO_93_03_12_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttacctgagctctcaactgttacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaactatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gaggccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgactcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaagaaacccct +ccccacgatggatgactccaaagtgaaaaaagtggccaatgttgtcctatgtgctctctcatcactgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattacgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggcgcatatgggttggagattctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctccccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggttgttttaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagagtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaattgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaatactcctcatgggaagggagtcatgaaaaccctca +ctgccggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaataaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaagggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaagaagatttctgtgaagaagaggagaccaaaatccggcaga +ggatattcaggccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgactttaagcccaaagggaaactatgggctgatgatgacaggattgttgact +acaatgagaaacttagtttcgaggccccaccaagcatctggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggggtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccataaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaagtgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgaacccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaagatggacatacgcgcaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatctatggggtagtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcaccacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtaggtgatttc +aagatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacggacttaaacctacccgccctgacaaaacagagggacccttaattatctctgaagatcttaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcactacttggtgaagctgcattgcatggtccatcattctacagtaaagtc +agcagattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttctcaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgataatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaattttct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgatcaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagatataccagg +ccccctagggacaccagacttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacagtggaccctacccga +ctacgctggtcag-ctcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggttttatgactatagccaagaatggtgattctccaataactgtccctccaaatggatattttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgcttacaaatactgta +ggatctttagttaacgcagg---agctaatgttatcaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaaccatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctaacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctggattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtcg +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------caattatcaactcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaacttcaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218733.1/1-7550 |Norovirus GII isolate NORO_94_23_10_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccgcccaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaacagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatctaccattatggcctgtacgtggaacgaggccttat +actcggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggagattacatggagagtcatt +cccctacactgcttttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aaa---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcaccttatcttcactattcac +cagacccattaaggacataataggaaaattgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgaactgcaagggcctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgccgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaagtggttcttcccaaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccactctgctcaaagacaaagacagcttggcaaccta +cttgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacccgacatcgt +gggcacaatcaactctctactggcaagaatcgctgctgcacgctctctagtgcatcgggcgaaagaagagct +ctccagcaggccaagacccgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacgggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaaaggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggctgcaggaacttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagatgctcctggggtggagaaggcga +agcgcgacttcccaggccaacctgacatgtggaaggacgctttcaatcctgacttctcacacataaaactgt +cgttggctccacagggtggttttgacaagaacggcaacaccccgcatgggaaaggtgtcatgaagaccctca +ccaccggctccctcatcgcccgggcttcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggatgatggacacaatgagagttggaagacagctcaaggatgtcaagaccatgtcggacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtatggtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgagagttgacaaagtacaaagtgccactgtgcaaaccaataatgaattagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaagtggaagacacagaaga--------gatggttaacgcagatggttgcccaaaactcaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaaggactcagtgatgaggagtacgacgagtaca +agagaatcagagaggaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgctagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +gaatttttagaccaacaagaaaacaacgcaaagaagagagggcctctctcggcttggtcacaggttctgaaa +tcaggaaaagaaacccagaagatttcaaacccaagggaaagctgtgggccgatgatgacagaagtgttgatt +acaatgagaaacttaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttctggttggg +gcttctgggtgtccc-ccagcctgtttataacttcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaaatcaggtgaattctgccgactgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaagggaccgtggccacactgctcatcaag +agaccgactggagagctcatgcctctggcagccagaatggggacccacgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccgcctggcacctacgaaccagcatacctcggtggcaaagatccc +agagttaaaggtggcccttcattgcaacaagttatgagggaccagttgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgttctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaggcctgcgcatcccttgacaaaaccacctccagtggctacccgcac +catatgcggaagaacgactgttggaatggggattccttcacaggaaaattggcagaccaggcctccaaggct +aatctaatgtttgaagagggaaagaacatgaccccagtctacacaggtgcacttaaagatgagttggtgaag +actgataaaatttatggtaagatcaagaagagacttctgtggggctcagatctggcgaccatgatacggtgt +gcccgggctttcggaggccttatggatgaattcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataaataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-taaaattctctc +cagaaccacacct-ggcccaggtagttgcagaagatctcctttcccctagcgttatggatgtaggtgacttt +caaatatcaataagtgaggggctcccctccggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaattcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggatccggagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacctcttgttatctctgaagatctggat +ggtctaacattccttcggaggactgtgacccgtgacccagctggctggtttggaaaactggaacaaagctca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccgacattttatagcaaaatt +agcaaattagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggacaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgttattgaatctagagttgggtccagagttaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +ctttgccgccgtaccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgtttccccatat +gattatagatgtgagaactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +caatcagaaggatgat---cctaagatgagaattgtggctatgctttatactccccttagatctaatggctc +aggtgatgacgtgtttacagtctcatgcagggtgttgactagaccctcccctgattttgacttcacatattt +ggtgccaccaacagtggaatctaagactaaaccattcaccctcccaatcctcacgcttggggagctctccaa +ttctaga---tttccagtgtccatagatcagatgtataccagccccaatgaagttatatcagtgcaatgtca +aaatggtaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcctt +caagg-----------------------------------------gagaggtgaccgcccatttgc----- +----atgacaat-------------------------------------------------------g---- +-------accatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctttgggcgtacctgattttcagggaagggtcttt--ggtatcatctccca---aagagacaaacacaac +agcc-ct-----gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcaaattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggac---------ttaatgacactg---------aacattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtttttccagggg +agcgcctgctctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagctattgattgtctgctaccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacaacaaaattctttcaatcatgataaggagatgttacag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggctataaagcagggagtcttgaccgctggc +ggcttctcccccgctgacgcagccagaggtgctgtgaatgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagattcacatcaa----------- +-------------------------------ccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccaacacacccagagccggccttcgag------------tgg +c---tctt-----------ctgtg------------tcctccttcactactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatag------tacagtttc------------------------at +caaattc--------aactcgcagcacaaacctctcccaatcaacggtttccag---------------ggc +tacatc---------------------------------------taggacaggtgagtgggttagagatca +aaataaaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcttct------g------------------------------atggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggt---------- +---a-a-a-t-ttattt---aga---at--------------------------gaaa--------tgatt- +---------------tt---atcttttaaaaaaa-------------aaaaaaaaa---------------- +------------------------------------------------------------------------ +- +>MH218734.1/1-7536 |Norovirus GII isolate NORO_95_25_01_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtc------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaataacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagcca-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacactgcctttagtgtgcccccccttagccaaagggaaaacagggacgctaaggaaccgtt +aactggggctattctggaaatgtgggatggggagatttatcattatggactgtatgtggaaaaagggcttgt +gctaggcgtgcacaagccgccggctgccatcagcatagccaaagtggaattgacacctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctcctgacaccttgaggaaactccacggtgagttatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggacctcaacgattcatggct +aag---cagaaggatgattagtaggactactggcttcttcaggccctaccaagagtggaacaggaaacctct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattatcatcattgttcac +taggcccattaaggatataattggcaaacttaaaccccttaacatcctaaacattctggcctcatgcgattg +gaccttcgctggcatagtagaatcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggcgactatgagctacaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcgtcaactctgagggcgtgcaaagatcttggagcctatggattggagatactgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +gttagacctggaggctattgaaaacaaccatatgaccactctattgaaggacaagaacagccttgcagcata +catgaagaccctggacatggaagaggaaaaagctaggaagctatccaccaaatcagcctcccctgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcgcgttccctagttcatagggccaaggaggagct +ctccagcaggccaagaccggtcgttttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcaacactcacaggagaccaaagggttggtcttatcccacggaatggagt +tgaccattgggacgcctacaaaggtgagagagtggtgctctgggatgactatgggatgagcaaccccatcca +cgatgcgctgaggctgcaggaattggcagacacatgtccattaactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagtgacgcgatcataatcaccaccaatttggtcaaccccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggtcgcacgtgcctctggtctcttacacgagagattagatgagtacgagttgcaaggtc +cgcccctctcaactttcaactttgaccgtaacaaaattgcagcattcagacaactcgccgctgaaaacaagt +acggtctggtagacacgatgagggtgggcaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcatgatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gtaagggcaaggttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccatcttagatgtgccagaataaggtattatgtcaagtgtgtccaagaggccatatactcactcctcc +agattgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatctgtggt +ctaggccactatctgaagatgcagatga--------ggccaccataaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttatcgtctcctcagatgatatcaagccagagggtaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaggggctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaagcaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcaggaagagaaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgacgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttctgggtgtcac-ctagcctcttcataacatcaacacacgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaagtcgggcgagttctgtcgcctgagattcccaaaacccatc +agaacagatgtgtcaggcatgatactggaggagggagcgcctgaaggtactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctagcagcaaggatgggcacccacgcgaccatgaggatacaagggcgc +acagtgggcggccagatgggaatgttgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgttatctgcgccacacaaggtagtgagggtgaggctactctcgagggtggtgac +aataaaggaacatattgtggggcaccaatcttaggccccggaaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctctacaacaccactcccacccggcacgtacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggc +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgttagagcaaacaatagac +cctccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcttcgaaggca +aacctaatgtttgaagaggggaaacacatgaccccagtttatacagctgcccttaaggacgagttggtcaaa +actgagaaagtgtatgggaggataaagaagaggttgctctggggttctgacttggccaccatggtgaggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacactcccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatataggtatcactatgatgcagactac +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaatt-agcccaaatagttgcagaggatctgttgtcgcccagtgttgttgacgtgggcgacttc +aaagtttccatcaacgaaggattaccatcgggtgtcccttgcacctctcaatggaactccatcgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagacctctctcctgacattgtgcaagccaactccctcttc +tccttctatggtgatgatgaagttgtgagcacagatatcaaattagacccagaaaagttgacggggaagttg +agggaatatggtctcaaacccacccgtcctgacaaaactgagggccccttgattattagtgaggatctgaat +ggcctgaccttcctgaggagaaccgttacccgcgaccctgcaggatggtttggcaaactggaccaaagctcc +atacttaggcaattgtactggaccaaaggccctaaccatgaagacccctttgagtcaatgattccacattcc +cagagacccatacaactcatgtcactcttgggtgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatccgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtctcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgctgccgtgccacctcacttcccggttgaaaatcttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgattttgattttacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgtacattggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaatagtcccgggcataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccgg- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--acccagccatcgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttgcagcaaaattcttttaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaagggatcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaagatattgggcaccaagctccatgaggaccacatcttattctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttgccactcagtcttcaagaccaactctg +atcacaaccactggtt-----cctcacatgg------cacagcctcatc----------aaattca------ +-------------------------------actcgcagcacaagcctctcccaatcaacggtctccagagc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-ata----------ta---------------------------t-ttaggat--------gaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218735.1/1-7537 |Norovirus GII isolate NORO_96_09_03_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgccaaggagccgct +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcttctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaatcccatcca +cgatgcgttgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgagaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcttatcgctctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaatcgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggaaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgttgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaaggatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgcct +ggtgactgtgggtgtccctatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactccctcccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcagagagccgttctggctgcggccatggagattatgg-ttaaattttcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaaattgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatttgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaacaatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatattt +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttacatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggcatcatctcccaaa---gagataa--------- +-----ac-----agaatagccctgggcacaatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtgtttccaggag +agcgcctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactgccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagtaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcagtgggctc +agttcattgattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggactggaacggt +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------tagaactaatgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218736.1/1-7537 |Norovirus GII isolate NORO_97_02_05_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaattaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaacga------tggggatgaaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaact +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgccaaggagccgct +aactggaactattctggaaatgtgggacggggagatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcttctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgttgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcttatcgctctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaatcgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaagtgtgtccaagaggccatctactcactcctcc +aaattgctggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggaaaatactccatagaggaatacctacaggacagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgttgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaaggatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgcct +ggtgactgtgggtgtccctatatttacaaaaggggcaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggtggtgac +aacaaagggacatactgtggggcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactccctcccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcgtctcttgacaaaaccacatctagtgggtttccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaagataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgctcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggactcaacacagcagagagccgttctggctgcggccatggagattatgg-ttaaattttcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaaattgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatttgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atactcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaacaatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatattt +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttacatga-----------------------------------------------ca---- +----atggccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggcatcatctcccaaa---gagataa--------- +-----ac-----agaatagccctgggtacaatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaatacaaatcttgccccttctgttgctccagtgtttccaggag +agcgcctgcttttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactgccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagtaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcagtgggctc +agttcattgattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggactggaacggt +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcaatcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------tacagcctcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------tagaactaatgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218737.1/1-7537 |Norovirus GII isolate NORO_98_16_06_2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaatacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagagaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatt-------aaaagaatccc +ccc-----------------------------cccaccacctaatga------tggggatggaccaaccgtg +atgtttagca----------ctgc---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagcgtgcctcccctcagccaaagggaaaacagggacgctaaggagccgtt +aactggaactgttctggaaatgtgggacggggaaatttatcactatggactgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccaccggctgccatcagcatagccaaagtggaattaacgcctctctcactgtattg +gaggcctgtgtacacgcctc---agtacctcatatctccagacaccttgaggaaactccacggtgaactatt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaaccatggatgactcaaaattgaaaaaggtcgcaaacatcgttctatgtgcattgtcatcattgttcac +tagacccattaaggatataattggcaagcttaaacccctcaacatcctgaacattctggcctcgtgcgactg +gaccttcgctggcatagttgagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactatgagctacaaggccctgaagacatcgctgtgga +gctcgtacccgttgtgatgggtgggataggtctggtgctgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcatcaactttgagggcatgcaaagatcttggagcctatggactggagatactgaaactagt +catgaaatggttcttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attggacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaatgccctgttggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcaggccaaggccggtcgtcttgatgatctctggcaagccagggataggaaagacccacttggccag +agaactggcaaagaaaatcgcctcaacactcacaggagaccagagagtgggcctcatcccacggaatggagt +tgaccattgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaagaactggcagacacatgtccattgactctaaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgatgcgatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +taactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccccggccaaccagacatgtggaaggacgcctatcgccctgacttctcacacatcaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacacccctcatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgagaggctagatgagtacgaattgcaaggtc +cacccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaactcgctgctgaaaacaagt +atggtctggtagacacgatgagggtgggtaaccagctcagaaatgtcacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgtcagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtagagttgtggttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagaatacggtattatgttaaatgtgtccaagaggccatctactcactcctcc +aaattgctggtacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccaccacgaaagaggggtgccctaaacctagg-- +-gat----gaagaag---aatttgtcgtctcctcagaagacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggattagagaggagagaaatggcaaatactccatagaggaatacctacaggatagagacaagtac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaactagaaagcaacgcaaggaagaaagagccaaccttggcctcgtcaccggatctgaga +tcaggaagaggaacccagatgactttaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaacgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcataccccaaggcataactgaagccttt +ggtgtacccataaggcaagtgcaaatacacaaatcgggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaag +agaaccactggagaactgatgccccttgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +acggtgggcggccaaatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacgcct +ggtgactgtgggtgtccctatatttacaaaaggggtaatgattacatagtcattggagttcacacagcagct +gcccgtggcggaaacactgtcatctgcgccacacaaggtagtgagggtgaggccacactcgagggcggtgac +aacaaaggaacatactgtggagcaccaatcctaggacccgggagtgccccgaaactgagcactaagaccaaa +ttctggaggtcctctacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagtcatgcgagaccaactgaagccattcaccgaaccccgtggt +aaaccaccaaaaccaagtgtccttgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacagaagtggacgtacgcgcaagcgtgcgcatctcttgacaaaaccacatctagtgggtttccccac +cacgtgcggaaaaacgagcactggaatggggaatctttcacaggaaaattggctgatcaggcatcaaaagca +aacctaatgtttgaagagggaaagcacatgactccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaggtgtatgggaaaataaagaagaggttgctttggggctctgatctggccacaatggtgcggtgc +gcgcgttcttttggtggtttgatggacgaacttaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcactatgatgcagactat +t-ccaggtgggattcaacacagcagagagccgtcctggctgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctactgtcgcctagtgtagttgatgtgggcgacttc +aaaatttccatcaacgaagggttaccatcaggtgtcccttgcacctctcaatggaactccattgcacactgg +ctcctcaccttgtgtgccctttctgaagttacagatctctctcccgatattgtgcaagccaactccctcttc +tccttctatggtgatgatgaaattgtgagtacagacattaaattagacccagaaaagttgacggggaagttg +agagaatacggcctcaaacccactcggcctgacaagactgagggccccctgatcattagcgaggatctgaat +ggcctgaccttcttgaggagaaccgtcacccgcgaccctgcaggatggtttggcaaactggaccagagctct +atattcaggcaattgtattggaccaagggtcctaatcatgaagacccctttgagtcaatgattccacactcc +cagaggcccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcgttttacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttagaacctgttttattaccacttcctgatgttaggaataatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggccatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccccaatgaggttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggtatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgaccacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacctgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----agaatagccctgggcacaatg----aaccagc----aaacaggggacacgatgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggtctcaatgacactga------------------acattttaaccaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaatcttgccccttctgttgctccagtgtttccaggag +agcgcctgctgttcttcagatcatatattcctc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaacgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgccgtgaatgcgcccatgacacaggcgctggactggaacggt +acaaggtattgggcaccaggctctatgaggaccacatcttattctgggaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------tcagcacacccaaaaccggcca---------------tcgag +tggctctt-----------ctgta------------tcctcctttgccactcaatcttcgaggccaactctg +accacaaccactgggt-----cctcacatgg------cacagcatcatc----------aaattca------ +-------------------------------actcgcagcacgagcctctcccaatcaacggtctctagagc +tacatc---------------------------------------taggactagtgattgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccctccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtgg-------- +---aaa-att----------tg---------------------------t-ttagaat--------aaattg +-------a-----tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH218738.1/1-7563 |Norovirus GII isolate NORO_99_09_06_2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaagacgaaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +ggaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtagaacgagggttagt +gctcggtgtgcacaaaccaccagcagcaatcagccttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacatt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaatgattcatggct +gaa---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggattggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaacttttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggaactcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatcttggtgcatatgggttggagatcctcaaattggt +tatgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagaccttgaagccattgagaacaaccatatgacagctctacttaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggtacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaagagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatacaaaggtgagagagtcgttctctgggacgactatgggatgagcagccctgtcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcccgaagttgagaaggcta +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgctggttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtctagttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaaacagg +ccctcaagaacatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgctaagcgcacga------acatacaaaacctctggt +ccaagccacaagcagaagatctagagga--------gactaacaacgaggagggttgtccaaaacccaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaacttcggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgttacgggcatgattttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgctaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacactgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagagggtggtgat +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtaatgagagaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatatgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +catatgcggaagaacgattgctggaatggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggagctctgaaagatgagctagtcaag +actgacaagatttatggggtggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaagtaccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaacctcatct-ggcccaagtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggactgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaaactg +agggaatacgggcttaaaccaacccgccctgacaaaacagagggacccttaattatctctgaagatctgaat +ggcctgaccttcctgcggagaacagtgacccgcgacccggccggatggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccagggggccaaaccatgaagacccctttgaaacaatgataccacactcc +cagagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccgtcattctacagtaaaatc +agcaaattggtcatttcggaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcaatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacacaccagtcccactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagctgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgttctcaccagat----------- +-----------caacaagcaga------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tt------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcc------------actgaatc +tagtgattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cataacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaaactacataa +actaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgctattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagtagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cggatcta--------------------------------cagttatcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-ttaaaattaggtttaa-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>MH413069.1/1-7554 |Norovirus GII isolate 10149, partial genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagacgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggtctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +tccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagaccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtttcaatcaagaagtgccaaatagtgtatagtggttgtacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgccggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgataggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggccacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggctcagggagtgccccaacacttagcaccaaaaccaaa +ttctggagatcgtccacagtatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaagaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccgcactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaactttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgccattaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttctctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------ggtgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctcttttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctgggttggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttccccc------------------ag +tatgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MH413070.1/1-7558 |Norovirus GII isolate 0859, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactgacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agacgtgtctgcgatgattgcccctttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaataggaaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaggtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcattc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccggcaaggacgggtgtccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaggaggaggaggccaagatccggcaga +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaag +ttttggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccattatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctttagaaatcatgg-ttaaattttccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaagg---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +tcctctgggaaccccagattttgtaggaaggatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggacggctcgacc--------cgc-----------ggtcacaaagccacagt +aagcactggaagtgtccacttcaccccaaagctgggcagtgttcaattctcta---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaga +ctattcaggtaga-gatagc------cacaatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatc---------------------------------g +tcaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacaccct-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-ag------- +---a-a-a-t-tgat-----ta-----t------cattc------------tt----t--------tcttc- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF352142.1/1-7497 |Norovirus GII strain GII/Hu/DE/2014/GII.P26_GII.26/Leipzig07788a, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaay------------------atatttgccaacat +gactgttggcataaagaggg----ctctgggggcgagatcaaaacaatccgcccccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccctatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctacatgacactgcatacagcgtcccccccctggaccaaagagaaaaggcagacgctaaggaaccctt +aaccggctcaataattgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacacccttaggaagctccatggtgaaacctt +cccctatatggcatttgagaacaactgctacacattctgctgttgggttttggacctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacagaccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggtaaactgaagccattaaacctcctcaacatcatcgccaactgtgactg +gacyttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcatcgcgtccttgttgggcgactatgaaatgcagggccctgaggacatcgcatccga +aatcgtcccagtcatccttggcggcattggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcatcatcycttagagcatgtagggaratcggcaactacggaatagaagtggtaaaattggt +aatgaaatggttcttcccgaccaaaagtgaagccaaygagatggagatggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaaagacaagaacagcctggccacctt +tctcagagcattggacatggaagaggaaaaggcgcggaaactgtcaaccaaatccgcttcacccgacatagt +cggcaccataaatgcactcttggcgagaatcgccgctgccagatctctagtgcacagggctaaggaagagat +gtcatccaggatgcgtcctgttgtcatcatgatatccggacggcctggaataggraagacccacttggcacg +cgayctggccaaaaagatggcagccactctatcaggtgaccaaagrgttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatayaarggagagaggatcgtcctctgggatgactatggcatgagcaaccccgtgtt +ggatgccctccggcttcaagaacttgccgacacatgccccytaacactcaattgtgacagaatagaaaacaa +ggggaaagtctttgacagtgacacyctgattatcaccaccaatttgcccaatccggcccccttggactatgt +gaactttgaagcttg-ctcacgccgcatagatttycttgtctacgcggaatccccctcagttgacaaggcaa +aaagrgatttyccgggccaacctgacatgtggaaagacgccttcaaaccagayttcwcacatataaagctac +aattggcaccacaaggggggtttgataagaatggaaacactccgcatgggragggcgtcatgaagtcactga +ccayacactccctcgtggcccgcgccgttggcctactccatgagaggttggatgaatttgacctacaaggac +cagacctgccagtgtacaactttgaccagaacaaggtggccgcattcmgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaagttgaaggaagtcaaaaccctggaacagttyaaggaag +cagtgaaggacatacgaataaaaccctgcaggataatttacaattccctggcctacgacttggamtcaaatg +ggtcaggaaaagtcartgtcaagaaagtgggggatcagagggtccaagctgacaacgagctcaactctgcgc +tcaacaaactgcgcgaggccagagtcagatattatgtgaagtgcttccaagaaatgatctactcagtcctcc +agattgccggcgcagcttttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggc +ccaagacaga------------aaagca--------aacggtcacctccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacactgctttttctagtaagggccttagtgatgaggagtatgatgarttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagaagcaacgtagggaggagagggcaaccctgggtcttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaatt +ataatgagagactagattttgaagccccccccagcctctggtccaggatagtcaacttcggatcaggctggg +gcttttgggtttcct-ccaacctgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtgccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagattcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaagggacggttgcraccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaggtgcaaggcaga +atgcttggaggccagatgggaatgctcctcacaggatccaatgccaaaaacatggaccttggcaccgtcccc +ggtgattgtggctgcccttatgtttacaagaggggcaatgactggattgtcatcggggttcacactgccgct +gctaggggcggyaacacggtgatctgtgcaacccaagggccagatggtgaagccacccttgaggggggggaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agggtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagcccttcaccgcccctcgcggg +aagccaccgagaccggcgattctggargccgcaaaggaaaccatctgcaatgtgttggaacaaaccattgaa +ccatcccagaagtggtcctacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgttctggccgatcaggcatcaaaggcc +aayctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +acyagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacytgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaaggcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaaacattcaaaatacaggtaccattatgatgctgactat +t-ccaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcag +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggcttgccctctggggtcccgtgcacatcccagtggaattcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctgtcaccagatgtggtgcaatcaaactcatgcttc +tccttttacggggatgatgagatagtcagcacagacattaaattggatccccaaaaattaacaaacaaacta +aaagaatatggcttgatcccaaccagacctgacaagacagaaggccctctcataatcaaggagagcttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaaaggacccaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtccctgcttggtgaagcagctctacatggaccagcattctacaaaaaggtt +agcaaattggtcattaccgaactcaaggaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcatccagtctcgtaccagaggccaacggcga +gacaatggctttggaaccggtggcgggaggagctatcgcagccccccttaccggacagacaaattttattga +cccctggattagaaataattatgtacaggcacccaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggycctgaacttaacccrttcctagcccatctggctagaatgtataa +tgggtatgctggaggtgttgatgtccaggtcatcatggcaggcaatgccttcactgc---tggtaaggtcat +ctttgctgcagtgccaccccacttcccagttgagagtctcagtcccccccaaattactatgtttccccatat +gatagtggatgtcagaacycttgaacctataaatatccccatacctgatgttaggaacaatttcttccatta +caatcagaacaatgag---ccccgcatgaagttggtggccatgttgtacactcccctcagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtcctaacaaagccctcagcagattttgagtttaattattt +ggtccccccgacggttgaatcaagaacyaaacccttcacaataccaatacttacaattggagagatgacaaa +ttcaaga---ttccctgcggccatcgacatgctgcacaccagcccaaatgaaaacatagtggtccaacccca +gaatggcaggtgcacacttgagggcgagttgctaggcacaacacagttggtgactccaaacatctgctccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacggtcacaaaccctaatggcaccccctttgatccaacagaagaagtgcctgc +ccccctaggcaccccagacttcataggtgaggtgtacggagtgctctcccaaa---gaaacaggaa---aat +aacttct-----ggccacactgcccccgcaaac--------agg-----------tcccatgaagctgtcat +ttccacaaggtgcaacaaatttacaccaaaattgggctcagtgatgattgcca---------cttggaayac +tgatgatat---tga---aaatgaacccacca---------------------------aattcacaccag- +--------taggg------cttgaaagccctg------------attccttccaccagtgggatttgccaag +ttactcaggggct-ttgact------ctcaacatggggctcgctccagctgtgtttccaacctaccccggcg +agcagatcctcttcttccgctcgtacatccctc------ttaagggtgggta------tggga--------- +--attcagtaattgattgtcttttgccacaggagtggatccaacacttctaccaagaatcagccccctcaca +gtcactagtggctttagttaggtatgtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacaa +gcaagggtacatgaccgtcgccaagactggtgacagccccatcaatgcccccgccaatggctatttcagatt +tgactcttgggttagtccattttattcacttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttacaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactgcaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagccttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +ttaaaac----------------aagccagacccctaagtctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatc------------agatcaaacccaacccaactcaccagt--------- +----------ctgagc-------tcacaytc------atccgggtcatctcgatccagtgggtccacagtta +ttagttcac------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatcttaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MF352143.1/1-7497 |Norovirus GII strain GII/Hu/DE/2015/GII.P26_GII.26/Leipzig07788e, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaac------------------atattygccaacat +gactgttggcataaagaggg----ctctrggggcgagatcaaaacaatccgcccccggagytacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +cccyatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctacatgacacygcatatagcgtcccccccctggaccaaagagaaaaggcagacgctaaggaaccctt +aaccggctcaataattgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacacccttaggaagctccatggtgaracctt +cccctataatgcatttgagaacaactgctacacattctgytgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacaggccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtcygggctgatcac +caggcctatcaaggacctcataggtaarctgaarccattaaacctyctcaacatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcatcgcgtccttgytgggcgactatgaaatgcagggccctgaggacatcgcatcyga +aatcgtcccagtcatccttggcggyrttggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcgtcatctcttagagcatgtagggagatcggcaactacggaatagaagtggtaaaattggt +gatgaaatggttcttcccgaccaaaagtgaagccaatgagatggagatggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaaagacaagaacagcctggccacctt +tctcagagcattggacatggaagaggaaaaggcgcggaaactgtcaaccaaatccgcttcacccgacatagt +cggcaccataaatgcactcttggcgagaatcgccgctgccagatctctagtgcacagggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacggcctggaataggaaagacccacttggcacg +cgacctggccaaaaagatggcagccactctatcaggtgaccaaagagttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatataagggrgagaggatcgtcctctgggatgactatggcatgagcaaccccgtgtt +ggatgccctccggcttcaagaacttgccgacacatgycccttaacactcaattgtgacagaatagaaaacaa +rgggaaagtctttgacagtgacactctgattatcaccaccaatttgcccaatccggcycccttggactatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtctacgcggaatccccctcagttgacaaggcaa +aaagggatttcccgggccaacctgacatgtggaaagacgccttcaaaccagatttcacacatataaagctac +aattggcaccacaaggsgggtttgataagaatggaaacactccgcatgggragggcgtcatgaagtcactra +ccatacactccctcgtggcccgcgccgttggcctactccatgagaggttggatgartttgacctacaaggac +cagacctgccagtgtacaactttgaccaraacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaarytgaaggaagtcaaaaccctggaacagtttaaggaag +cagtgaaggacatacgaataaaaccctgcaggataatttacaattccctggcctacgacttggaatctaatg +ggtcaggaaaagtcagtgtcaagaaagtgggggatcagagggtccaagctgacaatgagctcaactctgcgc +tcaacaaactgcgcgaggccagagtcagrtaytatgtgaagtgyttccaagaaatgatctactcagtcctcc +agattgccggtgcagcttttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggc +ccaagacaga------------aaagca--------aacrgtcaccyccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcrccggtggacacagtccaggaaggcaagaaaggcaaraaca +agagtggcagaggcaagaaacacacygcyttytctagyaagggccttagtgatgaggagtatgatgagttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgaggaaytggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagaagcaacgyagggaggagagggcaaccctgggycttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaatt +ataatgagagactagattttgaagccccccccagcctytggtccaggatagtcaacttcggatcaggctggg +gcttttgggtttcct-ccaacctgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtaccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagattcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaagggacggttgcaaccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcacycacgccaccatgaaggtgcaaggmaga +atgcttggaggccagatgggaatgctcctcacaggatccaaygccaaraacatggaccttggcaccgtcccc +ggtgattgtggctgcccttaygtttacaagaggggcaatgattggattgtcatcggggtccacactgccgct +gctaggggcggcaacacggtgatctgtgcaacccaagggccagatggtgaagccacccttgaggggggggaa +aaycatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactyccccctggyacatatgaacctgcctatctgggtggtaaagaccca +agggtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagccyttcaccgcccctcgcggg +aagccaccgagaccggcgattctggaggccgcaaaggaaaccatctgcaatgtgttggarcaaaccattgaa +ccatcccagaartggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgtyctggcygatcaggcatcaaaggcc +aacctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaaggcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaaacattcaaaatacaggtaccattatgatgctgactat +t-ccaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcrg +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggcttgccctctggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctatcaccagatgtggtgcaatcaaactcatgcttc +tccttttayggggatgatgagatagtcagcacagayatyaaattggatccccaaaaattaacaaacaaacta +aaagaatatggcttgatcccaaccagacctgayaagacagaaggccctctcataatcaaggagagcttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaaaggaccmaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtccctgcttggtgaagcagctctacatggaccagcattctacaaaaaggtt +agcaaattggtcatyacygaactcaaggaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcakccagtctcgtaccagaggccarcamyga +gacawtggctttggaaccggtggcgggaggagctatcgcagccccccttaccggacagacaaattttattga +cccctggattagaaayaattatgtacargcacccaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggtcctgaacttaacccattcctagcccayttggctagaatgtayaa +tgggtatgctggaggtgttgatgtccargtcatcatggcaggyaatgccttcactgc---tggtaaggtcat +ctttgctgcagtgccaccycacttyccagttgagagtctcagtcccccccaaattactatgtttccccatat +gatagtggatgtyagaacycttgaacctataaatatccccatacctgatgttaggaacaayttcttccatta +caatcagaacaatgag---ccccgcatgaagttggtggccatgttgtacactcccctcagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtcctaacaaagccctcagcagattttgagtttaattattt +ggtccccccgacrgttgaatcaagaactaaacccttcacmataccaatacttacaattggagagatgacaaa +ttcaaga---ttccctgcggccatcgacatgctgcacaccagcccaaatgaaaacatagtggtccaacccca +gaatggcaggtgcacacttgagggcgagttgctaggcacaacacagttggtgactccaaacatctgctccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacrgtcacaaaccctaatggyaccccctttgatccaacagaagaagtgcctgc +ccccctaggcaccccagacttcataggtgaggtgtacggagtgctctcccaaa---gaaacaggaa---aat +aacttct-----ggccacactgcccccgcaaac--------agg-----------tcccatgaagctgtcat +ttccacaaggtgcaacaaatttacaccaaaattgggctcagtgatgattgcca---------cttggaatac +tgatgatat---tga---aaatgaacccacca---------------------------aattcacaccag- +--------trggg------cttgaaagccctg------------attccttccaccagtgggatttgccaag +ttactcaggggct-ttgact------ctcaacatggggctcgcyccagctgtgttyccaacctaccccggcg +agcagatcctcttcttccgctcgyacatccctc------ttaagggtgggta------tgggr--------- +--attcagtrattgattgtcttttgccacaggagtggatccaacacttctaccaagaatcagccccctcaca +gtcactagtggctttagttaggtatgtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacaa +gcaagggtacatgaccgtcgccaagactggtgacagccccatcaatgcccccgccaatggctatttcagatt +tgactcttgggttagtccattttattcacttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttrcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactrcaggctgacatgattgccatcaarcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagcyttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tyaaaac----------------aagccagaccccyaagtctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatc------------agatcaaacccaacccaactcaccagt--------- +----------ctgagc-------tcacattc------atccgggtcatctcgatccagtgggtccacagtta +ytagttcam------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatctyaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagyac +agcctcy---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggwcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MF352144.1/1-7497 |Norovirus GII strain GII/Hu/DE/2017/GII.P26_GII.26/Leipzig07788f, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaac------------------atatttgccaacat +gactgttggcataaagaggg----ctctaggggcgagatcaaaacaatccgcccccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccccatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgccyaccgtctccactgtagacacatc +ccctctgcatgacaccgcatatagcgtccctcccctggaccaaagrgaraaggcagaygctaaggaaccctt +aaccggctcaataattgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtagtttacacacccc---cctacttggttgctcctgacaccctcaggaagctccatggtgagacctt +cccctataatgcatttgaraacaactgctacacattctgttgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacaggccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggyaaactgaagccattaaacctcctcaacatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcrtcgcgtccttgctgggcgactatgaaatgcagggccctgaggacatcgcatctga +aatcgtcccagtcatccttggcggcattggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcgtcatctcttagagcatgtagggagatcggcaactacgggatagaagtggtaaarttggt +gatgaaatggttcttcccgaccaaaagtgaagccaatgagatggaratggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaaagacaagaacagcctggccacctt +tctcagagcattggacatggaagaggaaaaggcgcggaaactgtcaaccaaatccgcttcacccgacatagt +cggcaccataaatgcactcttggcgagaatcgccgctgccagatctctagtgcacaaggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacggcctggaataggaaagacccacttggcacg +cgacctggccaaaaagatggcagccactctatcaggtgatcaaagagttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatacaagggggagaggatcgtcctctgggatgactatggcatgagcaactccgtgac +tgatgccctcaagcttcaagaacttgccgacacatgtcccttaacactcaattgtgacagaatagaaaacaa +ggggaaagtctttgacagtgacgctctgattatcaccaccaatttgcccaatccggctcccttggactatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtctacgcggaatccccctcagttgaaaaggcaa +aaagggatttcccgggccaacctgacatgtggaaagatgccttcaaaccagatttcgcacacataaagctac +aattggcaccacaaggcgggtttgataagaatggaaacactccgcatgggaagggcgtcatgaagtcactga +ccatacaytccctcgtggcccgcgccgttggcctactccatgagaggwtggatgaatttgacctacaaggay +cagacctgccagtgtacaactttgaccagaacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaaactgaaagaagtcaaaaccctggaacagtttaaggaag +cagtgaaggatatacgrataaaaccctgcaggataatttacaattccctggcctacgacttggaatctaatg +ggtcaggaaaagtcagtgtcaagaaagtgggggatcagagggtccaagctgacaatgaactcaactctgygc +tcaacaagctgcgygaggccagagtcagatactatgtgaggtgtttccaagaaatgatctactcagtcctcc +agattgccggtgcagcttttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggt +ccaagacaga------------aaagca--------aacggtcaccyccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacactgccttttctagtaagggccttagtgatgaggagtatgatgagttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagargcaacgyagggaggagagggcaaccctgggtcttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaatt +ayaatgagagactagattttgaagccccycccagcctttggtccaggatagtcaacttcggatcrggctggg +gcttttgggtttcct-ccaacctgttcatcacttccacacatgtcatcccaccgaayatgactgaagccttt +ggagtaccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagattcccaaaagccatc +agacccgatgtrtctggcatgatccttgaagaaggcgcccctgaagggacggttgcaaccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcactcacgccaccatgaaggtgcaaggcaga +atgcttggaggtcagatgggaatgctcctcacaggatccaatgccaagaayatggaccttggcaccgtcccc +ggtgattgtggctgyccttacgtttacaagaggggcaatgattggattgtcatcggggtccacactgccgct +gctagrggcggtaacacggtgatctgtgcaacccaagggccagatggtgaagccaccctcgaggggggggaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agggtcaagggcggcccgtcrctgcarcaggtcatgagggagcagctcaagcccttcaccgcccctcgcggg +aaaccaccgagaccggygattctggaggccgcaaaggaaaccatytgcaatgtgttggamcaaaccattgaa +ccatcccagaaatggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgtcctggccgatcaggcatcaaaggcc +aacctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcrctcaaggatgaacttgtyaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaaggcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaagcattcaaaatacaggtaccattatgatgctgaytat +t-ccaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcgg +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggcttgccctctggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctatcaccagatgtggtgcaatcaaactcatgcttc +tccttttatggggatgatgagatagtcagcacagacattaaattggatccccaaaaattaacaaacaaatta +aaagaatatggcttgatcccaaccagacctgataagacagarggcccyctcataatcaaggagagcttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaarggacccaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtctctgcttggtgaagcagctctacatggaccarcattctacaaaaaggty +agcaaattggtcatcaccgaactcaaggaaggtggaatggatttctatgtacccaggcaggaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccagtctcgtaccagaggccaccactga +gacattggctttggaaccggtggcgggaggagctatcgcagccccccttaccggacagacaaattttattga +cccctggattagaaayaattatgtacaagcacccaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggtcctgaacttaacccattcctagcccatttggctagaatgtataa +tgggtatgctggaggtgttgatgtccaagtcatcatggcaggtaatgccttcactgc---tggtaaggtcat +ctttgctgcagtgccaccccactttccagttgagagtctcagtcccccccaaattactatgtttccccatat +gatagtggatgttagaactcttgaacctataaatatccccatacctgatgttaggaacaatttcttccatta +caatcagaacaatgag---ccccgcatgaagttggtggccatgttgtacactcccctcagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtcctaacaaagccctcagcagattttgagtttaattatct +ggtccccccgacagttgaatcaagaactaaacccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgcggccatcgacatgctgcacaccagcccaaatgaaaacatagtggtccaacccca +gaatggcaggtgyacacttgagggcgagttgctaggcacaacacagctggtgactccaaacatctgctcyct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacagtcacaaaccctaatggyaccccctttgayccaacagaagaagtgcctgc +ccccctaggtaccccagacttcataggtgaggtgtacggagtgctctcccaaa---gaaacaggaa---aat +aacttct-----ggycacactgcccccgcaaac--------agg-----------tcccatgaagctgtcat +ttccacaaggtgcaacaaatttacaccaaaattgggctcagtgatgattgcca---------cttggaatac +tgatgatat---tga---aaatgaacccacca---------------------------aattcacaccag- +--------taggg------cttgaaagccctg------------attccttccaccagtgggatttgccaag +ttactcaggggct-ttgact------ctcaacatggggctcgctccagctgtgtacccracctaccccggcg +agcagatcctcttcttccgctcgtacatccctc------ttaagggtgggta------tggga--------- +--actcagtaattgattgtcttttgccacaggagtggatccaacacttctaccaagaatcagccccctcaca +gtcactagtggctttrgttaggtatgtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacaa +gcaagggtacatgaccgtcgccaagactggtgacagccccatcaatgcccccgccaatggctatttcagatt +tgactcttgggttagtccattttattcacttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgytatyaatcagaaagttgattttgagaayaataagtat--- +------------------------------ttgcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactacaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagccttggattggagtgga +acaaggtactgggcaccaaaygccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tcaaaac----------------aagccagacccccaagtctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatt------------agatcaaacccaacccaactcaccagt--------- +----------ctgagc-------tcacattc------atctgggtcatctcgatccagtgggtccacagtta +ttagttcac------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatctcaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagyac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MG572719.1/1-7497 |Norovirus GII strain GII/Hu/DE/2015/GII.P26_GII.26/Leipzig07788b, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaac------------------atatttgccaacat +gactgttggcataaagaggg----ctctgggggcgagatcaaaacaatccgcyyccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccctatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctacatgacactgcatayagcgtcccccccctggaccaaagagaaaaggcagacgctaaggaaccctt +aaccggctcaatarttgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtccccyctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacacccttaggaagctccatggtgaaacctt +cccctayaatgcatttgagaacaactgctacacattctgctgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttytacaggccctatcaagattggaayagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggtaaactgaarccattaaacctcctcaayatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcatcgcgtccttgctgggcgactatgaaatgcagggccctgaggacatcgcatcyga +aatcgtcccagtcatccttggcggcrttggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcrtcatctcttagagcatgtagggagatcggcaactacggaatagaagtggtaaaattggt +gatgaaatggttcttcccgaccaaaagtgaagccaatgagatggagatggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaargacaagaacagcctggccacctt +yctcagagcattggacatggargaggaaaaggcgcggaaactgtcaaccaaatccgcwtcacccgacatagt +cggcaccataaatgcactcttggcgagratcgccgctgccagatctctagtgcacagggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacggcctggaataggaaagacccacttggcacg +cgatctggccaaaaagatggcagccactctatcaggtgaccaaagagttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatataagggrgagaggatcgtcctctgggatgactatggcatgagcaaccccgtgtt +ggaygccctccggcttcaagaacttgccgacacatgycccttaacactcaattgtgacagaatagaaaacaa +rgggaaagtctttgacagtgacacyctgattatcaccaccaatttgccyaatccggcccccttggaytatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtctacgcggaatccccctcagttgacaaggcaa +aaagggatttcccgggccaacctgacatgtggaaagacgccttcaaaccagatttcacacatataaagctac +aattggcaccacaaggrgggtttgayaagaatggaaacactccrcatgggaagggcgtcatgaagtcactra +ccatacactccctcgtggcccgcgccgttggcytactccatgagaggttggatgaatttgacctacaaggac +cagacctgccagtgtacaactttgaccaraacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaagttgaaggaagtcaaaaccctggaacagtttaaggaag +cagtgaaggacatacgaataaaaccctgcaggataatttayaattccctggcctacgacttggaatctaatg +ggtcaggaaargtcagtgtcaagaaagtgggggatcagagggtccaagctgacaaygagctcaactctgcgc +tcaacaaactgcgcgaggccagagtcagrtattatgtgaagtgyttccaagaaatgatytactcagtcctcc +agattgccggtgcagcttttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggc +ccaagacaga------------aaagca--------aacagtcacctccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacacygctttctctagtaagggccttagtgatgaggagtatgaygagttca +aaaggatcagagaagaacgccaagggaartactccatagaagaatacctccaggacagggaccgatac---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagaagcaacgtagggaggagagggcaaccctgggtcttgtcacaggtagtgaga +taaggaagagraaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagygtcaatt +ataatgagagactagattttgaagcccccccyagcctctggtccaggatagtcaayttcggrtcaggctggg +gcttttgggtktcct-ccaacctgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtaccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagrttcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaagggacggttgcaaccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaggtkcaaggcaga +atgcttggaggccagatgggaatgctcctcacaggatccaacgccaaaaacatggaccttggcaccgtcccc +ggtgattgtggctgcccttatgtttacaagaggggcaatgattggattgtcatcggggttcacactgccgct +gctaggggcggcaacacggtgatctgtgcaacccaaggrccagatggtgaagccacccttgaggggggggaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agrgtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagcccttcaccgcccctcgcggg +aagccaccgagaccggcgatyctggaggccgcaaaggaaaccatctgcaatgtgttggarcaaaccattgaa +ccatcccagaartggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgttctggccgatcaggcatcaaaggcc +aacctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaargcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaaacattcaaaatacaggtaccattatgatgctgactat +t-cyaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcag +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggyttgccctctggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctgtcaccagatgtggtgcaatcaaactcatgcttc +tccttttacggggatgatgagatagtcagcacagacatyaaattggatccccaaaaattaacaaacaaacta +aaagartatggcttgatcccaaccagacctgayaagacagaaggccctctcataatcaaggagagyttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaaaggaccmaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtccctgcttggtgaagcagctctacatggaccagcattctacaaaaaggtt +agcaaattggtcatyacygaactcaaggaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcyaa---tgatggtgcrkccagtctcgtaccagaggccadcrvyga +gacwwtggctttggarccggtggcgggaggagctatcgcagcccccctyacyggacaracaaattttattga +cccctggattagaaataattatgtrcargcaccyaatggtgaattyacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggycctgaacttaacccattcytagcccayytrgcwagaatgtayaa +tgggtatgctggaggtgttgaygtccargtcatyatggcaggyaatgccttcactgc---tggtaargtcat +ctttgctgcrgtgccaccccacttcccagttgagagtctyagycccycccaaattactatgytyccccayat +ratagtggatgtyagaacycttgaacctrtaaayatccccatacctgatgttagraacaayttcttccayta +cartcagaacaatgag---ccccgcatgaagttggtggccatgytgtacacyccyctyagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtyctaacaaagccytcagcagattttgagttyaattattt +ggtccccccracrgttgaatcaagaactaaaccyttcacaataccaatacttacaattggagagatgacaaa +ttcaaga---ttccctgygsccatygacatgctrcacaccagyccaamtgamaacatwgtggtccaacccca +raatggcaggtgcacamttgagggcgagttrytaggcacaacacagttggtgactccaaacatctgckccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacggtcacaaacycyaayggcaccsccttygatccaacagaagawgtgcctgc +ccccctrggcaccccrgacttcataggygargtgtacggrgtgctctcccaaa---graayagraa---hat +aacttct-----ggmcacactgcccccgcaaac--------agg-----------tcycatgaagctgtcat +ttccacaaggtgcamcaaattyacrccaaaaytgggctcagtgatgattgcca---------cttggaayac +tgatgayat---tga---aaaygarcccacca---------------------------aattcacaccag- +--------trggr------cttgaragccctg------------awtccttccrccagtgggatttgccamg +ttaytcaggggct-ttract------ctcaacatggggctygcyccakctgtgtttccaacctwccccggcg +agcagatcctcttcttccgctcgyacatccctc------tyaagggtgggta------tgggr--------- +--attcakyratwgattgtctyttgccacargagtggatycaacayttctaccaagaatcagccccctcaca +gtcamwwgtggcyttarttaggtayrtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacar +rcaagggtwcatsaccgtcgccaagamyggtgacagccccatyaatgcycccgccaatggytayttcagatt +tgactcttgggttartccattttattcacttgcccccatgggaactgggaaygggcgtaga---------ag +grttc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttrcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactrcaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagcyttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tyaaaac----------------aagccagaccccyaagtctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatc------------agatcaaacccaacccaactcacyagt--------- +----------ctgagc-------tcacattc------atccgggtcatctcgatccagtgggtccacagtta +ytagttcam------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatctyaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagcac +agcctcy---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MG572730.1/1-7497 |Norovirus GII strain GII/Hu/DE/2015/GII.P26_GII.26/Leipzig07788c, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaac------------------atatttgccaacat +gactgttggcataaagaggg----ctctgggggcgagatcaaaacaatccgccyccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccctatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctacatgacactgcatayagcgtcccccccctggaccaaagagaaaaggcagacgctaaggaaccctt +aaccggctcaatarttgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacacccttaggaagctccatggtgaaacctt +cccctataatgcatttgagaacaactgctacacattctgctgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacaggccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggtaaactgaarccattaaacctcctcaayatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcatcgcgtccttgctgggcgactatgaaatgcagggccctgaggacatcgcatcyga +aatcgtcccagtcatccttggcggcrttggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcrtcatctcttagagcatgtagggagatcggcaactacggaatagaagtggtaaaattggt +gatgaaatggttcttcccgaccaaaagtgaagccaatgagatggagatggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaaagacaagaacagcctggccacctt +tctcagagcattggacatggargaggaaaaggcgcggaaactgtcaaccaaatccgcwtcacccgacatagt +cggcaccataaatgcactcttggcgagratcgccgctgccagatctctagtgcacagggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacggcctggaataggaaagacccacttggcacg +cgatctggccaaaaagatggcagccactctatcaggtgaccaaagagttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatataagggrgagaggatcgtcctctgggatgactatggcatgagcaaccccgtgtt +ggaygccctccggcttcaagaacttgccgacacatgycccttaacactcaattgtgacagaatagaaaacaa +rgggaaagtctttgacagtgacacyctgattatcaccaccaatttgccyaatccggcccccttggaytatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtctacgcggaatccccctcagttgacaaggcaa +aaagggatttcccgggccaacctgacatgtggaaagacgccttcaaaccagatttcacacatataaagctac +aattggcaccacaaggrgggtttgayaagaatggaaacactccrcatgggaagggcgtcatgaagtcactra +cyatacactccctcgtggcycgcgccgttggcctrctccatgagaggttggatgartttgacctacaaggac +cagacctgccagtgtacaactttgaccagaacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaagttgaaggaagtcaaaaccctggaacagtttaaggaag +cagtgaaggacatacgaataaaaccctgcaggataatttacaattccctggcctacgacttggaatctaatg +ggtcaggaaaagtcagtgtcaagaaagtgggggatcagagggtccaagctgacaaygagctcaactctgcgc +tcaayaaactgcgcgaggccagagtcagrtattatgtgaagtgcttccaagaaatgatctactcagtcctcc +agattgccggtgcagcytttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggc +ccaagacaga------------aaagca--------aacrgtcacctccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacacygcyttytctagyaagggccttagtgatgargagtatgatgagttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgargaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagaagcaacgtagggaggagagggcaaccctgggtcttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaatt +ataatgagagactagattttgaagccccccccagcctytggtccaggatagtcaacttcggatcaggctggg +gcttttgggtttcct-ccaacytgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtaccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagattcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaagggacggttgcaaccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaggtgcaaggcaga +atgcttggaggccagatgggaatgctcctcacaggatccaacgccaaaaacatggaccttggcaccgtcccc +ggtgattgtggctgcccttatgtttacaagaggggcaatgattggattgtcatcggggttcacactgccgct +gctaggggcggcaacacggtgatctgtgcaacccaagggccagatggtgaagccacccttgaggggggggaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agrgtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagcccttcaccgcccctcgcggg +aagccaccgagaccggcgatyctggaggccgcaaaggaaaccatctgcaatgtgttggarcaaaccattgaa +ccatcccagaartggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgttctggccgatcaggcatcaaaggcc +aacctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaargcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaaacattcaaaatacaggtaccattatgatgctgactat +t-cyaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcag +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggyttgccctctggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctgtcaccagatgtggtgcaatcaaactcatgcttc +tccttttacggggatgatgagatagtcagcacagacatyaaattggatccccaaaaattaacaaacaaacta +aaagartatggcttgatcccaaccagacctgayaagacagaaggccctctcataatcaaggagagyttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaaaggaccmaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtccctgcttggtgaagcagctctacatggaccagcattctacaaaaaggtt +agcaaattggtcatyacygaactcaaggaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcyaa---tgatggtgcrkccagtctcgtaccagaggccadcrvyga +gacwwtggctttggaaccggtggcgggaggagctatcgcagcccccctyacyggacaracaaattttattga +cccctggattagaaataattatgtrcargcaccyaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggycctgaacttaacccattcytagcccayytrgcwagaatgtayaa +tgggtatgctggaggtgttgaygtccargtcatyatggcaggyaatgccttcactgc---tggtaargtcat +ctttgctgcrgtgccaccccacttcccagttgagagtctyagycccccccaaattactatgttyccccayat +ratagtggatgtyagaacycttgaacctataaayatccccatacctgatgttagraacaayttcttccayta +cartcagaacaatgag---ccccgcatgaagttggtggccatgytgtacacyccyctyagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtyctaacaaagccytcagcagattttgagttyaattattt +ggtccccccracrgttgaatcaagaactaaaccyttcacaataccaatacttacaattggagagatgacaaa +ttcaaga---ttccctgygsccatygacatgctrcacaccagyccaamtgamaacatwgtggtccaacccca +raatggcaggtgcacamttgagggcgagttrytaggcacaacacagttggtgactccaaacatctgckccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacggtcacaaacycyaayggcaccsccttygatccaacagaagawgtgcctgc +ccccctrggcaccccrgacttcataggygargtgtacggrgtgctctcccaaa---graayagraa---wat +aacttct-----ggmcacactgcccccgcaaac--------agg-----------tcycatgaagctgtcat +ttccacaaggtgcamcaaattyacrccaaaaytgggctcagtgatgattgcca---------cttggaayac +tgatgayat---tga---aaaygarcccacca---------------------------aattcacaccag- +--------trggr------cttgaragccctg------------awtccttccrccagtgggatttgccamg +ttaytcaggggct-ttract------ctcaacatggggctygcyccakctgtgtttccaacctwccccggcg +agcagatcctcttcttccgctcgtacatccctc------tyaagggtgggta------tgggr--------- +--attcakyratwgattgtctyttgccacargagtggatycaacayttctaccaagaatcagccccctcaca +gtcamwwgtggcyttarttaggtayrtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacar +rcaagggtwcatsaccgtcgccaagamyggtgacagccccatyaatgcycccgccaatggctayttcagatt +tgactcttgggttartccattttattcacttgcccccatgggaactgggaaygggcgtaga---------ag +grttc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttrcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactrcaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagcyttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tyaaaac----------------aagccagaccccyaaktctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatc------------agatcaaacccaacccaactcacyagt--------- +----------ctgagc-------tcacattc------atccgggtcatctcgatccagtgggtccacagtta +ytagttcam------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatctyaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagcac +agcctcy---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MG572731.1/1-7497 |Norovirus GII strain GII/Hu/DE/2015/GII.P26_GII.26/Leipzig07788d, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcac----aacaaagatgagaacccctcatcgaac------------------atatttgccaacat +gactgttggcataaagaggg----ctctgggggcgagatcaaaacaatccgccyccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccctatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctacatgacactgcatayagcgtcccccccctggaccaaagagaaaaggcagacgctaaggaaccctt +aaccggctcaatarttgaaatgtgggacggtgagatctaccattatgggctctatgtggagaaaggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacacccttaggaagctccatggtgaaacctt +cccctataatgcatttgagaacaactgctacacattctgctgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacaggccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggtaaactgaarccattaaacctcctcaayatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatcctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcatcgcgtccttgctgggcgactatgaaatgcagggccctgaggacatcgcatcyga +aatcgtcccagtcatccttggcggcrttggcatggtccttggcttcaccaaagagaaaattggccggctgct +gagctccgcagcrtcatctcttagagcatgtagggagatcggcaactacggaatagaagtggtaaaattggt +gatgaaatggttcttcccgaccaaaagtgaagccaatgagatggagatggtcagagcaatagaagatgcagt +gctcgactacgaggcaatacaaaataaccacatgacagccttgctcaargacaagaacagcctggccacctt +tctcagagcattggacatggargaggaaaaggcgcggaaactgtcaaccaaatccgcwtcacccgacatagt +cggcaccataaatgcactcttggcgagratcgccgctgccagatctctagtgcacagggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacggcctggaataggaaagacccacttggcacg +cgatctggccaaaaagatggcagccactctatcaggtgaccaaagagttggcctcgtcccaagaaacggtgt +tgaccactgggatgcatataagggrgagaggatcgtcctctgggatgactatggcatgagcaaccccgtgtt +ggaygccctccggcttcaagaacttgccgacacatgycccttaacactcaattgtgacagaatagaaaacaa +rgggaaagtctttgacagtgacacyctgattatcaccaccaatttgccyaatccggcccccttggaytatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtctacgcggaatccccctcagttgacaaggcaa +aaagggatttcccgggccaacctgacatgtggaaagacgccttcaaaccagatttcacacatataaagctac +aattggcaccacaaggrgggtttgayaagaatggaaacactccrcatgggragggcgtcatgaagtcactra +cyatacactccctcgtggcycgcgccgttggcctrctccatgagaggttggatgaatttgacctacaaggac +cagacctgccagtgtacaactttgaccaraacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaagttgaaggaagtcaaaaccctggaacagtttaaggaag +cagtgaaggacatacgaataaaaccctgcaggataatttayaattccctggcctacgacttggaatctaatg +ggtcaggaaaagtcagtgtcaagaaagtgggggatcagagggtccaagctgacaaygagctcaactctgcgc +tcaayaaactgcgcgaggccagagtcagrtattatgtgaagtgyttccaagaaatgatctactcagtcctcc +agattgccggtgcagcytttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggc +ccaagacaga------------aaagca--------aacrgtcacctccacgggaccacctgtcccccca-- +--------gatgaag---aatggaccatagcaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacacygcyttytctagyaagggccttagtgatgaggagtatgatgagttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataaggcaga +gggtcttccgcccgaccaagaagcaacgtagggaggagagggcaaccctgggtcttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaatt +ataatgagagactagattttgaagccccccccagcctytggtccaggatagtcaacttcggatcaggctggg +gcttttgggtttcct-ccaacctgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtaccaataaaccaaatacagatacacaggagtggagagttctgcaagatgagattcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaagggacggttgcaaccatactgatcaag +agaacaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaggtgcaaggcaga +atgcttggaggccagatgggaatgctcctcacaggatccaacgccaaaaacatggaccttggcaccgtcccc +ggtgattgtggctgcccttatgtttacaagaggggcaatgattggattgtcatcggggttcacactgccgct +gctaggggcggcaacacggtgatctgtgcaacccaagggccagatggtgaagccacccttgaggggggggaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaaactcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agrgtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagcccttcaccgcccctcgcggg +aagccaccgagaccggcgatyctggaggccgcaaaggaaaccatctgcaatgtgttggarcaaaccattgaa +ccatcccagaartggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgttctggccgatcaggcatcaaaggcc +aacctcatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaargcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaaacattcaaaatacaggtaccattatgatgctgactat +t-cyaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcag +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggyttgccctctggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctgtcaccagatgtggtgcaatcaaactcatgcttc +tccttttacggggatgatgagatagtcagcacagacatyaaattggatccccaaaaattaacaaacaaacta +aaagartatggcttgatcccaaccagacctgayaagacagaaggccctctcataatcaaggagagcttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaaaggaccmaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtccctgcttggtgaagcagctctacatggaccagcattctacaaaaaggtt +agcaaattggtcatyacygaactcaaggaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcyaa---tgatggtgcrkccagtctcgtaccagaggccadcrvyga +gacwwtggctttggaaccggtggcgggaggagctatcgcagcccccctyacyggacaracaaattttattga +cccctggattagaaataattatgtrcargcaccyaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattaggycctgaacttaacccattcytagcccayytrgcwagaatgtayaa +tgggtatgctggaggtgttgaygtccargtcatyatggcaggyaatgccttcactgc---tggtaargtcat +ctttgctgcrgtgccaccccacttcccagttgagagtctyagycccccccaaattactatgttyccccayat +ratagtggatgtyagaacycttgaacctataaayatccccatacctgatgttagraacaayttcttccayta +cartcagaacaatgag---ccccgcatgaagttggtggccatgytgtacacyccyctyagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggtyctaacaaagccytcagcagattttgagttyaattattt +ggtccccccracrgttgaatcaagaactaaaccyttcacaataccaatacttacaattggagagatgacaaa +ttcaaga---ttccctgygsccatygacatgctrcacaccagyccaamtgamaacatwgtggtccaacccca +raatggcaggtgcacamttgagggcgagttrytaggcacaacacagttggtgactccaaacatctgckccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacggtcacaaacycyaayggcaccsccttygatccaacagaagawgtgcctgc +ccccctaggcaccccrgacttcataggygargtgtacggrgtgctctcccaaa---graacagraa---wat +aacttct-----ggmcacactgcccccgcaaac--------agg-----------tcycatgaagctgtcat +ttccacaaggtgcamcaaattyacrccaaaaytgggctcagtgatgattgcca---------cttggaayac +tgatgayat---tga---aaaygarcccacca---------------------------aattcacaccag- +--------trggr------cttgaragccctg------------awtccttccrccagtgggatttgccamg +ttaytcaggggct-ttract------ctcaacatggggctygcyccakctgtgtttccaacctwccccggcg +agcagatcctcttcttccgctcgyacatccctc------tyaagggtgggta------tgggr--------- +--attcakyratwgattgtctyttgccacargagtggatycaacayttctaccaagaatcagccccctcaca +gtcamwwgtggcyttarttaggtayrtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacar +rcaagggtwcatsaccgtcgccaagamyggtgacagccccatyaatgcycccgccaatggctatttcagatt +tgactcttgggttartccattttattcacttgcccccatgggaactgggaaygggcgtaga---------ag +grttc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttrcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactrcaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagcyttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tyaaaac----------------aagccagaccccyaaktctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatc------------agatcaaacccaacccaactcacyagt--------- +----------ctgagc-------tcacattc------atccgggtcatctcgatccagtgggtccacagtta +ytagttcaw------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggttaaccaaca +aaatctyaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagcac +agcctcy---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgcttttcgcgt +accttcatagaaggggggagtcaaa--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MG572732.1/1-7497 |Norovirus GII strain GII/Hu/DE/2017/GII.P26_GII.26/Leipzig07788g, complete genome +------------------------------gacgctgccactgcgaccgctggcacacccagcacaaacagt +gaaattcam----aacaaagatgagaacccctcatcgaac------------------atatttgccaacat +gactgttggcataaagaggg----ctctaggggcgagatcaaaacaatccgcccccggagttacctcaaaca +acaagggcgggaaa-----------------------------------------------accaccatccc +ccccatacccc--------------------ccccacccccaaatgg------tgaggacatagtaatcaag +tacaccaaac----------aagg---ggacacgatcagtggagtgcccaccgtctccactgtagacacatc +ccctctgcatgacaccgcatatagcgtccctcccctggaccaaagrgaaaaggyagacgctaaggaaccctt +aaccggctcaataattgaaatgtgggacggtgagatctaccattatgggctctatgtggagaarggattggt +ccttggtgtacataaaccaccggcagccgtgagcctcgcgcgcatcgagctgtcccctctttccctatactg +gagggtrgtttacacacccc---cctacttggttgctcctgacaccctcaggaagctccatggtgagacctt +cccctataatgcatttgataacaactgctacacattctgttgttgggttttggatctgaacgattcttggct +caa---cagaaaattcgtgtcaagaactacaggtttctacaggccctatcaagattggaayagaaaaccatt +gccaaccatggacgaggggaagctcaaaaaggtggccaatgtgttcctgtgcggtctgtctgggctgatcac +caggcctatcaaggacctcataggtaaactgaagccattaaacctcctcaacatcatcgccaactgtgactg +gaccttttctggagttgtagagtcagtgatyctcttggcagaactcttt---ggcatcttttggacaccacc +agacatatcagctttcgtcgcgtccttgctgggcgactatgaaatgcagggccctgaggacatcgcatctga +aatcgtcccagtcatccttggyggcattggcatggtccttggcttcaccaaagagaraattggccggctgct +gagctccgcagcgtcatctcttagagcatgtagggagatcggcaactacgggatagaagtggtaaaattggt +gatgaaatggttcttcccgwccaaaagtgaagccaatgagatggaaatggtcagagcaatagaagatgcagt +gctcgactaygaggcyatacaaaataaccacatgacagccttgctcaaagacaagaacagcctggccacctt +tctcagagcattggacatggaagaggaaaaggcgcggaaactgtcaaccaaatcygcttcacccgacatagt +cggcaccataaatgcactcttggcgagaatcgccgctgccagrtctctagtgcacaaggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggrcggcctggaataggaaagacccacytggcacg +cgacctrgccaaaaagatggcagccactctatcaggtgatcaaagarttggcctcrtcccaagaaacggtgt +tgaccactgggatgcatacaagggggagaggatcgtcctctgggatgactatggcatgagcaacyccgtgac +tgatgccctcaagcttcaagaacttgccgacacatgtccyttaacactcaattgtgacagratagaaaacaa +ggggaargtctttgacagtgacactctgatyatcaccaccaatttrcccaatccggctcccttggactatgt +gaactttgaagcttg-ctcacgccgcatagayttccttgtctacgcggaatccccctcagttgaaaaggcaa +aaagggatttyccgggccaacctgacatgtggaaagaygccttcaaaccagayttcacacacataaagctac +aattggcaccacaaggcgggtttgataagaatggaaacactccgcatgggaagggcgtcatgaagtcactga +ccatacattccctcgtggcccgcgccgttggcctactccatgagaggttggatgaatttgacctacaaggat +cagacctgccagtgtacaactttgaccagaacaaggtggccgcattccgaaaactcgcggccgacaacaaat +atggactcatggacaccctaagagcaggcaacaaactgaaagaagtcaaaaccctggaacagtttaaggaag +cagtgaaggatatacgrataaaaccctgyaggatartttacaattccctggcctacgacttggaatctaatg +ggtcaggraaagtcagtgtcaagaaagtgggggatcagagggtccaagctgacaatgaamtcaactcyrcgc +tcaacaagctgcgtgrggccagrgtcagatactatgtgaggtgtttccaagaaatgatytactcagtcctcc +agattgccggtgcagcttttgtcacatcaagaatagcacaaaggatga------acttcaacaaaatgtggt +ccaagacaga------------aaagca--------aacggycaccyccacgggrccacctgtcccccca-- +--------gatgaag---aatggaccatagcrccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacactgccttttctagtaagggccttagtgatgaggagtatgatgagttca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccgatac---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaagaggtcaaaataagrcaga +gggtcttccgcccgaccaagaagcaacgyagggaggagaggrcaaccctgggtcttgtcacrggtagtgaga +taaggaagagraaccctgatgatttcaaaccaaaaggaaagctgtgggctgatgatgaccgcagtgtcaayt +ayaatgagagrctagattttgaagcccccccyagcctytggtccaggatagtcaacttcggatcaggctggg +gcttttgggtytcct-ccaacctgttcatcacttccacacatgtcatcccaccgaacatgactgaagccttt +ggagtrccaataaaccaaatacagatacayaggagtggagagttctgcaagatgagrttcccaaaagcyaty +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaaggracggttgcaaccatactrrtcaag +agaacaactggtgaactcatgccwttggcagctcgcatgggcacycacgccaccatgaaggtgcaaggcaga +atgcttggaggycagatgggaatgctyctcacaggatccaaygccaaraacatggaccttggcacygtcccc +ggkgattgtggctgcccttacgtttacaagaggggcaaygattggattgtcatcggggtycacactgccgct +gctaggggcggyaacacggtgatctgtgcwacccaagggccagatggtgaagccaccctcgaggggggggar +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaarctcagcaccaaaaccaaa +ttttggaggtcctccaatgtctcactcccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agggtcaagggcggcccgtcactgcagcaggtcatgagggagcagctcaagcccttcaccgcccctcgtggg +aaaccaccgagaccggtgattctggaggccgcaaaggaaaccatctgcaatgtgttggaacaaaccattgaa +ccatcccagaaatggtcatacgcgcaagcctgcgcatccctggacaaaacaacctcaagtgggcacccccac +cacaaaaagaagaatgacaattggaatggtgaatctttcactggtgtcctggccgatcaggcatcaaaggcc +aaccttatgtatgaacaagggaaacacatgcagcctgtgtacacaggagcactcaaggatgaacttgttaag +actagcaaaatttatgagaacattaaaaagaggcttctgtggggctcagacttgggcacgatgatacgctgt +gccagagcattcggtggtctcatggatgagatgaaggcaaactgtgtgaatttaccagtcagggttggtatg +aacataaatgaggatgggcccataatctttgagaagcattcaaaatacaggtaccattatgatgctgactat +t-ccaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaatcatgg-tcaggttctcgg +ccgaacctgaatt-ggcacaaatcgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggcttgccctcyggggtcccgtgcacatcccagtggaactcgattgcccattgg +ctactaacactgtgcgccatgtcagaagtctcagggctatcaccagatgtggtgcaatcaaactcatgcttc +tccttttatggggatgatgagatagtcagcacagacattaaattggatccccaaaaaytaacaaacaaatta +aaagaatatggcttgatyccaaccagacctgataagacagaaggcccyctcataatcaaggagagcttggag +ggcctaaccttcctgaggagggatgtgtgcagagacccagttggatggtatggcaagcttgatcaatcatca +atcatgaggcaactatattggaccaarggacccaaccatgaagaccccaatgaaacgatgatcccacactct +cagagacctgttcaactgatgtctctgcttggtgaagcagctctacatggaccarcattctacaaaaaggtt +agcaaattggtcatcaccgaactyaaggaaggtggaatggatttctatgtacccaggcaggaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccagtctcgtaccagaggccaccactga +gacattggctttggaaccggtggcgggaggagctatcgcagcccccctyaccggacagacaaattttattga +cccctggattagaaayaattatgtacaagcacccaatggtgaatttacaatatcccctagaaattctcctgg +tgaaattttactyaatttggaattaggtcctgaacttaacccattcctagcccatttggctagaatgtataa +tgggtatgctggaggtgttgatgtccaagtcatcatggcaggtaatgccttcactgc---tggtaaggtcat +ctttgctgcagtgccaccccactttccagytgagagtctcagtcccccccaaattactatgttyccccatat +ratagtggatgttagaactcttgaacctataaatatccccatacctgatgttaggaacaatttcttccatta +yaatcagaacaatgag---ccccgcatgaagttggtggccatgttgtacactcccctcagatcaaatggttc +trctgatgatgttttcacagtgtcatgcagggtcctaacaaagccctcagcagattttgagtttaattatct +ggtccccccgacagttgaatcaagaactaaacccttcaccataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgcggccatcgacatgctgcacaccagcccaaatgaaaacatagtggtccaacccca +gaatggcaggtgyacacttgagggcgagttgcwaggcacaacacagctggtgactccaaacatctgctcyct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacagg----------------- +----------tggcacatgacaatcacaaaccctaatggyaccccctttgatccaacagaagaagtgcctgc +ccccctrggcaccccagacttcataggtgaggtgtacggagtrctctcccaaa---gaaacaggaa---aat +aacttct-----ggycacactgcccccgcaaay--------agg-----------tcccatgaagctgtcat +ttccacaaggtgyaacaaatttacrccaaaattgggctcagtgatgattgcca---------cttggaayac +tgatgatat---tga---aaatgaacccacca---------------------------aattcacaccag- +--------taggg------cttgaaagccctg------------attccttccaccagtgggatttgccaag +atactcaggggct-ttgact------ctcaacatggggctcgcyccagctgtgtacccracctaccccggcg +agcagatcctcttcttccgctcgtacatccctc------ttaagggtgggta------tggga--------- +--actcagtaattgattgtcttttgccacaggagtggatccaacacttctaccaagaatcagccccctcaca +gtcactagtggctttagttaggtatgtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacaa +gcaagggtacatgaccgtcgccaagamtggtgacagccccatcaatgcccccgccaatggctatttcagatt +tgactcttgggttagtccattttattcacttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------agtaatggcaggagcttttrtagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctatcaatcagaaagttgattttgagaataataagtat--- +------------------------------ttgcaaagtgcatcttttaatcatgataaggaaatgctgcaa +gcacaaattcaggcaacaaaacaactacaggctgacatgattgccatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagccttggattggagtgga +acaaggtactgggcaccaaacgccaccgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------aactgtgcaccggaccgcaccaaat---------------------------------t +tcaaaac----------------aagccagacccccaagtctgtg--------------------------- +-------------------------------------------------ccc---------------agcag +tgggtcct-----------caatt------------agatcaaacccaacccaactcaccagt--------- +----------ctgagc-------tcacattc------atctgggtcatctcgatccagtgggtccacagtta +ttagttcac------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagrgaatgggttaaccaaca +aaatctcaatttggaaccacacatgc---ctgggtctaccaggatagcttttgtcactccaccatctagyac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcatctgcgt------------ttaacacacgcagacagccgctyttcgcgt +accttcatagaaggggggagtcama--------agtttag--t-----------gaaaagaatgtt------ +-tta-a-att-tgat------------------------------------ttga-tt------tggattta +a------------ttgg---attctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>MG745985.1/1-7536 |Norovirus GII isolate GZ60, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactcaaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatattctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcgtcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatatt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaaaagct +atctaacaggataaaaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaagagtatcttcaagacagagacaggtac---t +atgaagagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggtcgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccagactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggcatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------cgtggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745986.1/1-7536 |Norovirus GII isolate GZ72, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcgtac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatataaccattggggtgcacactgcaaca +acccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacgtacgcacaggcgtgtacctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgttggcccctagcgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggagctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745987.1/1-7536 |Norovirus GII isolate GZ78, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcgtac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatataaccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtgaagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacgtacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgttggcccctagcgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggacccaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggagctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745988.1/1-7536 |Norovirus GII isolate GZ1519, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacactgcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtagttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745989.1/1-7536 |Norovirus GII isolate GZ1520, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacactgcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtagttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745990.1/1-7536 |Norovirus GII isolate GZ1528, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcgcacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggcggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745991.1/1-7536 |Norovirus GII isolate GZ1619, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacactgcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgccccagg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggcggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745992.1/1-7536 |Norovirus GII isolate GZ1621, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcggagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcgcacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccctatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagcgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgttcttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgccccagg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggcggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattaa-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745993.1/1-7536 |Norovirus GII isolate GZ2043, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccctaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatttacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtaatcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggacctaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgccccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattttcagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggcatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggtgaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacataatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctgctaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcttc-----------aa--------at +tcaactcgc----agcacaagcctttcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgaatgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745994.1/1-7536 |Norovirus GII isolate GZ2113, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagagaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggacacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtagtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatgtattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattggtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccaccctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaggccacaatt---agatcaaaatga--------gtcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacgtctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagtaccaaaaccaaa +ttttggaggtcatcgaacacgcccctcccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagctgcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagactatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745995.1/1-7536 |Norovirus GII isolate GZ28487, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaggaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcgcacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---tggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +cccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745996.1/1-7536 |Norovirus GII isolate GZ28491, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaggaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---tggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcgacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745997.1/1-7536 |Norovirus GII isolate GZ28577, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------agcaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +cgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggcaacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggatcgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggacgagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtccaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcagattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatataaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------catagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745998.1/1-7536 |Norovirus GII isolate GZ28587, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------agcaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +cgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccccccgtgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +caaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggcaacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggatcgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggtataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgcccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggacgagggggcccaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtccaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcagattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatataaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------catagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG745999.1/1-7536 |Norovirus GII isolate GZ28626, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagattaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgactttaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtgatccccgcaggcataacagaagcattc +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccataaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatataatcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaattggacatacgcacaggcgtgtgcctcactcgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcattcggcgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggacgagagggcccaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcactatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttctttcatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgctc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccattacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746000.1/1-7536 |Norovirus GII isolate GZ29003, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggcgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtgttagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaggccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcagtcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacgatggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acattcaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgcgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggcgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggacgagggggcctaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtacagccggcctcgtgccagaaagtaacaatga +ggttatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------ag---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcggccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagatatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaatc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---aac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746001.1/1-7536 |Norovirus GII isolate JSNJ12108, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcagacggacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagcaagaggtgctgtgaacgcgcccatgacacaggcgatggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746002.1/1-7536 |Norovirus GII isolate JSNJ121057, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcagacggacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgatggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746003.1/1-7536 |Norovirus GII isolate FJ16235606, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +cct-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactcaaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacggcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacgcaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatactaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-cc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746004.1/1-7536 |Norovirus GII isolate FJ16235609, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +cct-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactcaaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacggcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacgcaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatactaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-cc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggcgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746005.1/1-7536 |Norovirus GII isolate BJSYL53, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaggt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacgtcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgtgaccatgaaaattcaaggtcgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccaatgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacaatctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccagtgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746006.1/1-7536 |Norovirus GII isolate BJSYL75, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagatacaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +agtagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtatccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacctgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccaggaacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaagcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggacccaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacgaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctctgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaatacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcctactaccacaagaatgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccagtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaaccgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----ccccacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746007.1/1-7536 |Norovirus GII isolate CQ006, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctttggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacccgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaatggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacagaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataataacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagattaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcagaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctgggggtgcaccaaaactgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttactaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccccgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacgaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatctacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccgactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746008.1/1-7536 |Norovirus GII isolate CQ031, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcggcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccacggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggatcattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---acatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggcgtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgtccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcctctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaagttgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggacgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaacaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggatcctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcacccttccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagtgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgcgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746009.1/1-7536 |Norovirus GII isolate CQ035, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagctttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgcctttaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggggtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcgagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggtaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagtaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccactggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcgcccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaatcctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaacgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagcg +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaagttatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatccttacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagatacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactgccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagtaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcacccatgacacaagcgctagattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746010.1/1-7536 |Norovirus GII isolate BJHDG3, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagtgacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ctttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaggagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataactttttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaagggatcttaaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggcgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746011.1/1-7536 |Norovirus GII isolate GX170034-1, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacggtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacctct +gcctaccatggatgactccaaagttaagaaggtagcaaacatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgctgt +attagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcctagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcacctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttttgtgaagaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcacgtaatccccgcaggcataacagaagcgttt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaattggacatacgcacaggcgtgtgcctcactcgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagacctttattggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctggac +ggtcttactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataactttttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggttttatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatctacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggtct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccgactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746012.1/1-7536 |Norovirus GII isolate GX170034-4, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacggtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacctct +gcctaccatggatgactccaaagttaagaaggtagcaaacatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgctgt +attagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcctagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcacctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggattttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaataccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaactatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttttgtgaagaggaggagatcaaaatccgtcaaa +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcacgtaatccccgcaggcataacagaagcgttt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaaaattggacatacgcacaggcgtgtgcctcactcgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagacctttattggtaaactggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcacttaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggacgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctggac +ggtcttactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataactttttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +agctggttttatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctattagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatctacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggtct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccgactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgt---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746013.1/1-7536 |Norovirus GII isolate GZ24140, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccagagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746014.1/1-7536 |Norovirus GII isolate GZ24890, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746015.1/1-7536 |Norovirus GII isolate GZ27188, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaggaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtattg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +acctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgacgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccccaccgggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccagagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---tggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgac---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tgcatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746016.1/1-7536 |Norovirus GII isolate HNCD2701, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagtttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ctccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccagttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggctcccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaaaatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagttgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttgaccgccaaattg +aaggagtacggtctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagagggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtatccatagaccagatgtatactagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagatacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgatgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcgactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746017.1/1-7536 |Norovirus GII isolate HNCD7, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgagg---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcctgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggtcagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcgtcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctagctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggtaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagattaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatgtagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccttctctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattttctg +cagaaccacaatt-ggcacaaataatcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtaccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccagccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746018.1/1-7536 |Norovirus GII isolate JNCH4, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttttgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacattgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacatggggtcttgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746019.1/1-7536 |Norovirus GII isolate JNCH8, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagtct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagctggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caattttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acattcaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaaaggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746020.1/1-7536 |Norovirus GII isolate JN-II8, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaagaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgcaaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacatatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctgctgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctcaagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaagaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746021.1/1-7536 |Norovirus GII isolate JSWXJINYQ, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatctttaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcttcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgatatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggcgagagagtcgtgctgtgggacgattatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtttcttcaagacagagacaggtac---t +atgaggagctcgccattgccaagtccacggaagaagacttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaaggaaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaagtccgc +atggttggcggacaaatgggtatgttgctcattggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtctaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtggtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatggactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtaaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746022.1/1-7536 |Norovirus GII isolate JSYZ25, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctatgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaggagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggcgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtggatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacactgtggt +ccccacttacacagcacagtacactccaaaactgggccaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccctcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgattaatgcagg---tgctaatgcaataaatcagagggcagagtttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaagggatcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------aa +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746023.1/1-7536 |Norovirus GII isolate JSYZ35, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctatgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaattaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaggagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggcgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcaggttctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtggatgtaggagacttc +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacactgtggt +ccccacttacacagcacagtacactccaaaactgggccaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacaccgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--gcccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccctcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgattaatgcagg---tgctaatgcaataaatcagagggcagagtttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaagggatcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------aa +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746024.1/1-7536 |Norovirus GII isolate HNLD01, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaattttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatatctcatctcccctgaaaccctcaggaggctcaacggagagacatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaagtaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggagaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccagcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccccaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggcatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccttttactgaacccaggggc +aaaccgccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggaatacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctcctttggaaaactggaccaaagctca +atttggaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatatcataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acctgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgatttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataacgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttatacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcaaaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------ccaagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcttcatc-----------aa--------at +tcaactcgc----agtagaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccacctcccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746025.1/1-7536 |Norovirus GII isolate LNDL00401, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagtatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatgatacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +attagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcagccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggagatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccacctttaacttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttcctggcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgcgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcaattctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccgaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctcctttggaaaactggaccaaagctca +atttggaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgggcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacaccacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcagcacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtttc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaacttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gattaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746026.1/1-7536 |Norovirus GII isolate LNLY502, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaacccccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagccatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaatggagaggcatt +cccttacaccgcctttgataacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaagattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggtaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttcactgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcatcgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatctacaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttaggaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaataggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccccagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctcctttggaaaactggaccaaagctca +atttggaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtagattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtgtcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttatacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaagctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacacgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746027.1/1-7536 |Norovirus GII isolate CQ1, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcggcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccacggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggatcattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgacttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccagaaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaacccatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagagggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagctgcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctcctttggaaaactggaccaaagctca +atttggaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaacaatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcacccttccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataagacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagtgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcatcggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcgc +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746028.1/1-7536 |Norovirus GII isolate CQ5, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcctgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccagtgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataataacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgactttaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccccaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagctgcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttaaatgggtccccttttgatccctccgaagatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcatcggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttgcagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcgc +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746029.1/1-7536 |Norovirus GII isolate SC1, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcctgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacctttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaatcggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccagtgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaattaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataataacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------accagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +taccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgatcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcaccaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagctgcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgctcactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggacctaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgcca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaagatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------catccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746030.1/1-7536 |Norovirus GII isolate SHDJN30, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcatgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcctgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaaacattccccaacc +ggaagtggccaacccagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacagaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgttatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttggcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaatcctattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacagtcaccaccttcaacttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctatggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagatttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatggcaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccaggtacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgccgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaattctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactagacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaat------ctcaacacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaagccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaaccagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcacg--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746031.1/1-7536 |Norovirus GII isolate LNSY3, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gctgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgataccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaacttaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccactgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacccgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcagagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagacgtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaacttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggtaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggcgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgggttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagttgctgaggatctgctggcccctagtgtagtagatgtaggagatttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactaggggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgccccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaacctcagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgacccttccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aatgatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcacg--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746032.1/1-7536 |Norovirus GII isolate SZ45, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccatgaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccatcca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtatacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgacgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcaggttcccaaaaccaatt +agaccagatgtgactggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaagattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaagatctatggaaagatcaagaagaggctgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaagtagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgtccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcaggtgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcactatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagtcctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aatttaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcacg--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746033.1/1-7536 |Norovirus GII isolate SZ123, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtatacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +atcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgatagcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaagagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaacccct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatggcaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgctcggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcaaaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctaccaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaga---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggatataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcacg--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746034.1/1-7536 |Norovirus GII isolate SZ127, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggcgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccatgaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtactgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattaccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgatgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaagagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaaatggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgagttttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacagaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagatttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcaggtgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgacgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaaggatcaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgcccctgtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaaccagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtttcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccataacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746035.1/1-7536 |Norovirus GII isolate SZ136, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +attgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccctaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaggggcaaagttttggtggaaaaggtcaagaacacctatgtacaggccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccaccaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcggacatccctat +cacgtccgaaagaatgaattctggaatggcgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaaa +actgagaaaatctatggaaagatcaggaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgctcggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtgat +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttctttagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttactctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------caccctaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746036.1/1-7536 |Norovirus GII isolate SZ190, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +gctagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaggcagtctattccatcgtac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaagaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +agacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgt +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatggatggtccccag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtattcccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtagccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgactgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaact--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaatca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgag +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746037.1/1-7536 |Norovirus GII isolate SZ205, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcttgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcaggccttaccaagagtggaacagaaaacccct +gcccaccatggatgactcaaaaattaagaaggtagcaaatatattcctatgttcattgtccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +atcctcagcagcgtcaacactcagggcttgcaaagatcttggtgcctatggcttagagatacttaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcagatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaagagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctctcgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccagactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtccaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccaccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------cgtggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtacgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcagacagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgcgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746038.1/1-7536 |Norovirus GII isolate SZ325, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaattttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagatctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagttggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaattttgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttaggaaaagaaaccctgacgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggggat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cctccacaagattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaagatctatggaaagatcaagaagaggctgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcaggtgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggttatggctcttgaacctgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgttccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttcccccatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcat-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tactgtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgatactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aatgatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcagacagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgcgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746039.1/1-7536 |Norovirus GII isolate HNXT01, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaagcagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctccggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacactgcattcagtgttccaccattgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcggccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggtcagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttctttccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaggacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacgaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgatagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaattcgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaattggccgtggcaagaaacacactgcgttctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtat---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaacggtgaggccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaacagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctcctttggaaaactggaccaaagctca +atttggaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaactggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtatcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagcccttcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggatgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacgtc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttaa--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tactaa +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746040.1/1-7536 |Norovirus GII isolate BJHD1608Y123, complete genome +----gttaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagtgacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacgggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgcgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagacatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctttgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaaattttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttttgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +ttagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacgactcct +ggtgactgtggctgcccttacatctataagaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ctttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaagtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtccttgaacaaaccctggac +cccccacaaaattggacatacgcacaggcgtgtgcctcacttgacaaaaccacctctagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggcgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +agggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatctgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcacttcttggtgaagcctctcttcacgggccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaacgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtggtatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataactttttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggcgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggcttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaagggatcttaaccgctggc +ggtttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggcgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tactaa +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746041.1/1-7536 |Norovirus GII isolate BJFT359, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaatc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattatccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcgacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggatgaggccagtagttgttatgatatctggaaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagtaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttaggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcgccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagagggcctaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcggcccctgtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggcatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tatagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746042.1/1-7536 |Norovirus GII isolate BJFT385, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacaacct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggcc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaaggagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaatc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattggccacattgttcac +cagacccataaaagacctcataggaaaaattaaaccgttgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacatcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgcagt +actagaccttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcacttccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggacctaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggcatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgatttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746043.1/1-7536 |Norovirus GII isolate BJFT463, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgttgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagtttcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaggatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaggatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatattcgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggcgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgatatcatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagctaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtattggacgagggggcctaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------tagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcacc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746044.1/1-7536 |Norovirus GII isolate BJFT640, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttattatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctggccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataatgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgtcgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcgactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctagaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgatatcatacaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgttctggacgagggggcctaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgctc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------ggccataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatggatggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG746045.1/1-7536 |Norovirus GII isolate BJFT694, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaagaagagct +atctagcaggataaggccagtagttattatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaatcgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgctttcaagccggacttttcacacatcaagctac +agcttgcaccccaaggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgacg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataatgagttggctggggctc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcattatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcgactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaagggatggacttgggaacaactcct +ggtgattgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggctctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgcgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctagaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcagtggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaagctgtcccctgatatcatacaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctaaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggacgagggggcctaatcatgaagaccccaacgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccctggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgctc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------aattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG892908.3/1-7510 |Norovirus GII strain Hu/GII.P16-GII.13/RUS/Novosibirsk/NS17-A1008/2017, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaagccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtggcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctaatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagttgcaggggccagaagacctcgccgttga +actcgtacccgtggtgatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtcccctcaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagagctcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaatgagatggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---ggatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaaggggaaaaata +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagcttcggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgagttttgccgcttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgagaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggcgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagttaag +actgagaaaatctatggaaagatcaagaagagactgctatggggctctgatttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactatcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagacttgaac +ggactcactttcctccgtaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacctatgttc +aggtggatgaggttttctgacctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaatataattga +cccctggataagaacaaattttgtgcaagcccctaatggagaatttacagtatcacccagaaattcccctgg +agagattttattaaatttagagttgggaccagatttgaacccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgctcccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccag---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgttttcactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacactcccaatattgaccatttctgaactaaccaa +ttcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggtaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagtggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccaag---ataatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatat---------at +ttccaccaccagtggaagatttaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggggtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgca------ctaaacaccaatttggcacccgctgttgccccgactttccctggtg +agcaattgctgtttttcaggtcccgtgttccatgt--gttcaaggtctgcag------gggcag-------- +-gatgctttcatagactgtctcctacctcaagagtgggtgaaccatttttatcaggaggctgctccctccca +agcagacgtcgccctcatcaggtatgtcaaccctgatactggtcgtactctgtttgaggccaaactgcacag +gtcaggtttcattactgtgtcacacactggtgcctaccctcttgtggtccccccgaatggtcattttaggtt +tgactcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgatatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattaaattttgattataacaaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttagattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtt---------------------------------- +------------------------------------------------ccct------------------tc +taattcat-----------cccag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caagggggtcctctgcagcctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagattgggtgcaacaaca +ga---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctttta +a-aatgtgattttattt---tccttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG892929.3/1-7581 |Norovirus GII strain Hu/GII.P16-GII.4/RUS/Novosibirsk/NS17-A869/2017, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aataccttatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgttatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatactacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgaactagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +agcgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagactctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagagaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaagaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaagtgtgtgcaagaggcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcgtatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcatactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacaaggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattttaggccctgggggtgcaccaaaactgagtaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtgatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagttaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttgcctgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgttccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagagcagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactaggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccggaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagag--------------atgc---------------- +------------------------------tgtccctgctcggagaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgctacctctg----------------- +-------------tgt-----attcaaatca------aactatttcaac----------aag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG892946.3/1-7569 |Norovirus GII strain Hu/GII.P16-GII.3/RUS/Novosibirsk/NS17-A843/2017, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aaaaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aataccttatctcccctgaaactctcaggaggctcaacggagaggtgtt +cccttacaccgcctttgacaacaactgttatgccttttgctgctgggtgttagaactcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccaaggatgaccccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttgctcggggactacgagttacaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgttgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagagtggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatatacggtggctccacgtatgaccttgagtctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggtcc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agtttatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaagcattt +ggagtctccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtactcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcatactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaactaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcatgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgattcggtgc +gccaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccaatacgagtcggcatg +aatatgaatgaagatggcccaatagtatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtaactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcgatggcgctagagccagtggcgggtgcagcgatagcagcacctctcactggccagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagtttacggtgtcccctagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatttaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcgatgctatatacacctctcagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgatttctcattcaatttcct +tgtaccacctactgtggagtcaaagacaaagccctttttccttcctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgccacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgcgcttt +taggggcgttctcaccagatcaacaagcagggccagtgatcaggccgatacagcaatccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcatatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcacatgaagcaaaaat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctacgctggtcag-tttaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttctttcgctcacatctgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaaccctgacactggtagggtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggttactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgattttgaaaataataagtatttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaagatactgggcaccaggtgccacctccacaacctccatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagatcc---------acaccaaattttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------ctatcagctcaatacc-----------at------------------c +ctctag---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----ga------------tttggtt----------ta-------------aaatta +g-gtttaatttg-g--a---atcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG892953.3/1-7568 |Norovirus GII strain Hu/GII.P16-GII.3/RUS/Novosibirsk/NS17-A1029/2017, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttatttacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +gaacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggactgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcagaaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgtcga +actcgtaccagtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatctggccag +ggaggtggcgagaaaggtggcatctactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +agcgggactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaaaaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttagccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagataggtac---t +atgaggagctcgccattgccaaggctacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctattcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaagccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactgggtcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccaggaacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacccccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaggggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +accgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgcgccttgtctgaggtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttaaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggttggtttggaaagctggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcaccggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcaactggaaccagtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgaaattgcgcctgattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagtcctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccttttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgtca +aaatggacgcgtcactcttgatggcgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggggcgtgctcactaggtcaacaagcagggctagtgaccaggccgacacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagattttcggggtaaagtctttggcgtggccagccaaa---gaaaccccg------- +----------------------acagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcca---------ct---gaatc +tggcgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccagt +tgg---cattggggtt---------gaccaagagtcagac---------ttccagcaatggtccttacccga +ttactctggccag-ttcact------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttacca------tcttctggtgggcg------atcca--------- +--atgggattctagattgcctggtcccccaagaatgggtccagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaacccattttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggtgcttttgtagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatatttg +caaaatg---------------------------------cttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagagattacaggctgatatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaatcaacgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcacaaaccag--------- +gc---------------------tgtgcacaggacc---------acgccaaattttaaaatgaaccag--- +gccccca----------------gatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcactctca------------------ac +ccaaatca-----------ctagt------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcggatctac-----------ag---------- +------------------------ttgctagctcactacc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaattttaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagg----------- +---t-t-a-t-ctta-----aa------------tttgatt----------t--------------aaattg +a-atttgatttg-g--a---atcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG892974.3/1-7553 |Norovirus GII strain Hu/GII.P16-GII.2/RUS/Novosibirsk/NS17-A991/2017, complete genome +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctacccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggggaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggacgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccttgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacaggatcacggcgttcagacagttggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acattcaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaaaggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagataaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaatccaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgaactagtcaag +actgagaaaatctatggaaaggtcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattgtcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgcccaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacctgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagacgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaatacaatat +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaatcggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccatccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtacctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgcaaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-gatgaattga-tttt---accttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG706448.1/1-7525 |Norovirus GII isolate Hu/GII.PNA4-GII.NA4/PNV06929/2008/PER, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcacaaccagctcaaacagt +gaaattcac----aacaaagatgttagtaacacacaaaac------------------atctttgccaacat +gactgttggcataaagaggg----ctctgggggcgaggccaaaacaacctccccccaagcccccttccacaa +agaaggaggacaaa-----------------------------------------------accacccttcc +tccaatacccc--------------------ccccaccccccaatgg------tgaggacattgtcatcacg +tacaacaagc----------aaga---tgacaaggtcagtggagttcccatcgtttccactgttgagacatc +ccctctgcatgacaccgcatacagtgtccctcccctggatcaaagggaaaaggttgatgcaaaggagcccct +aacaggttcaatactcgagatgtgggatggtgagatctaccactacggcctctatgtggagaagggtttggt +cctcggcgtgcacaagccaccatccgccttgagcctggcacgcatagagttaacccccctctctctctactg +gaggacagtctatacaccac---cctacctagtggctccagacaccctcaagaaactccacggggaatcatt +cccctacacggcttttgacaacaactgctacaccttttgctgttgggtcttagacctaaacgactcatggct +taa---taggaaatgtgtatcaaggactactggcttctacagaccctaccaggattggaatagaaaacccct +accaaccatggatgagagtaaactcaaaaaggtggccaatgtgtttctgtgtggtctatccagcttattcac +caggcctattaaggacctcgtaggtagactcaaaccattgaacatcctcaacattgtcaccaactgtgattg +gactttccccggtgttgtagaagctctcatcctactggcagaactcttt---ggcattttctggaccccacc +ggacatatccgctttcgtagcctccctgttgggcgactacgagatgcaagggcctgaggacattgcaaccga +gatcgtgccagttgttctcggtggtattggcatggtccttggtttcaccaaagagaggattggccgactact +gagttcagctgcatcatcactcagggcatgcaaggagattggcaactacgggatagaggtggtcaaattggt +gatgaaatggttctttcccaccaaaaatgaagtgaatgaaatggagatggttagggcgatagaagatgcggt +acttgacttcgaggcaatagaaaacaaccatatgacagccctgctcaaagacaagaacagcctagccacttt +cctcagagcactagacatggaggaggagaaagcgcggaaattgtcaaccaaatccgcgtcaccagacataat +cggtaccataaacgcccttctagccaggctcgccgccgctagatccctagtccacagggccaaggaagagat +gtcatccaggatgcgtcctgttgtcattatgatttctggccgacccggaatagggaagacacaccttgcacg +cgacctggctaagaagatggcagcaaccctctcaggtgaccagagagtgggccttgtaccaagaaacggtgt +cgatcactgggatgcatacaaaggagagagaatcgtgctctgggatgattatggcatgagcaaccccgtgtc +tgatgccctacggctccaagaacttgccgacacatgccccctaacacttaattgtgacaggatagagaacaa +agggaaagtctttgatagtgataccataatcataacaaccaatctgtcaaacccagctccacttgattatgt +aaactttgaagcttg-ctcccgccgcattgacttcctcgtctatgcggattcccctgcagttgacaaagcaa +agagggatttccctggtcaaccagacatgtggaaggatgcattcaaatcagacttctcccacataaaattac +aattggcaccacaaggaggtttcgacaaaaatggcaacaccccacatggtaaaggagtcatgaagaccctaa +ccacacactctctcatagccagggctactggtttgttgcatgagagactggatgaatttgatctacaaggtc +cagaattgcccatatacaattttgaccagaacaaggtggcttcctttaggaagctggctgcagacaacaagt +atggtctcatggaaaccataaaagcaggtaacaagttgaaggaagtcaagacactggatcaattcaaagagg +ccgtgagggacatacgcataaagccttgcagaataatctacaattccacagcttatgacctggagtctaacg +gctcagggaaggtcactgtcaagaaagtaggagaccaaaaagtccaagccaacaatgagctctactctgccc +tcaacaacctgcgtagagccaggattagatactatgtcaagtgtttccaagaaatgatctactcactcctcc +aaatagccggtgcggcttttgtcacatcgagaatgacacaaaggatga------atgttggcaagctgtgga +ccaagccgga------------gagaac--------tatgaaggcccccacggagccccctgctcctcca-- +--------attgatg---attggaccataaacccagttgacacaattccggaaggtaagaaaggcaagaaca +aaagtggtagagggaagaaacacactgccttctccagcaaaggtctcagtgatgaggagtacgatgaataca +agaggatcagagaggaacgtcaaggaaggtactccatagaagaatacttgcaggacagagaccgctat---t +atgaagaattggctatagccaaagcaacagaggaaaatttctgtgaagaggaagaagtcaaaataaggcaaa +ggatcttcaggccaaccaagaaacaacgcagggaagaaagagccaccctgggactggtcacaggcagtgaaa +tcaggaaaaggaacccagatgacttcaaaccaaagggaaagctgtgggctgatgatgaccgtagcgttaact +acaatgaaaggatagattttgaagccccccctagtctatggtctagaatagttaattttggttcaggttggg +gtttctgggtctctt-ccaacctcttcatcacctccacacatgttgttccaccaggcatgacggaggctttt +ggagtcccaacaagccaaatccaaattcacaggagtggggaattttgcaagatgagattccccaaagccatc +agacctgatgtctctggaatgattcttgaggaaggcgcacccgaagggacggtggtgaccatactgatcaag +agaaccactggagagctcatgccactggcagcccgtatgggcacccatgccaccatgaagatacaggggagg +atgattgggggccaaatggggatgcttctcacagggtccaatgccaaaaatatggaccttggtaccgtcccc +ggagattgtggctgtccttatgtctacaaaaggggtaatgattgggttgtcattggggtgcacaccgccgct +gcaaggggtggcaacacggtgatatgtgcaactcagggaccagatggagaagccacacttgagggaggagac +aatcacggtacttactgtggcgcaccaatcatgggaccaggaaatgccccaaaactcagcaccaaaaccaaa +ttctggagatcttccaatgccccacttccccctggcacatatgaacctgcctatcttggtggtagagacccc +agggttaaaggtggcccatcactacaacaagtcatgagagaccaactcaaacccttcaccgctccccgtggg +aagccgccaaggccggcagttctagaggccgctaaggagaccatctgtagcgtacttgagcaaaccatagaa +ccaccccaaaagtggtcctatgcgcaagcctgtgcttccctggacaagacaacatcaagtggctacccccac +cacaagaagaagaatgataactggaatggagagtctttcactggcgtcctggctgaccaggcatcaaaagca +aatctcatgtttgagcaagggaaacacatgcagcctgtgtatacagctgcacttaaggatgaacttgtcaag +accagtaagatctatgaaaccatcaagaaaaggctcttgtggggttctgacctgggcacgatgattcgttgt +gcaagatcatttgggggtctcatggatgagatgaaggctaactgtgtgagattgcccatcagggtcgggatg +aacatgaatgaagatggacctataatctttgagaaacatgcaaaatatagatatcattatgatgctgattat +t-ccaggtgggactcaacccaacagagacacatactgggtgttgcacttgacatcatgg-ttaaattctcag +ctgaaccagaact-atcacaagtggtgtctgaggatcttctgtcacccagtgtcgtggatgttggtgacttt +aagatcacaataaacgagggccttccctcaggtgtcccatgcacatctcaatggaactcaattgctcattgg +cttctaacactgtgtgccatgtcggaagtctctggactctcccccgacgtggtacaatcaaattcatgtttc +tccttctatggggatgatgagatagtcagcacagacataaagttggacccacaaaaactgacagacaaactg +agagagtatgggctcattccaacccgacctgataaaacagaggggccactcataattagagagagcttagag +ggtctgacgttcctcaggagagatatatgtagggacccagtcggctggtatggtaagcttgaccagtcctca +atcatgagacaactgtattggaccaaaggacccaaccatgaggatcccaatgaaacaatgattccacattct +caaagaccaatacaattaatgtcccttctcggtgaggctgccctgcatggaccaacattttacaagaaagtt +agcaaattggtaatcactgaactcaaagaaggtggaatggatttttacgtgcccagacaagaaccaatgtac +aggtggatgagattctccgacttgagcacgtgggagggtgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgccaacctcgttccagaggccaactcaga +ggcattggcattggaaccggtggcaggtggggctattgccgcacctctcactggtcaaacaaatataattga +cccctggattatgaaaaactttgtgcaggcacctaatggtgaattcacaatatccccaagaaattcccctgg +agaaattttgttaaaccttgagttaggaccagaaattaatccttttcttgcccacttatctaggatgtataa +tgggtttgctgggggagtggaggtacaggtgctcatggctggcaatgcattcactgc---aggaaaggtcat +atttgcggctgtgccgcctcatttcccagtagaaaacattagtcccccacagataactatgttcccccacat +aatagttgatgttaggactcttgaaccaatttttatccctgtcccagatgtgagaaataatttctttcatta +caatcaaatgaatgat---ccaaagatgaggttaattgctatgctgtacacccccttaagatcaaatggttc +ttctgatgatgttttcactgtgtcttgtagagttctcaccagacccacccctgattttgagttcaattattt +ggtaccacccactgtcgagtcaaggacaaaacccttcagtgtgcccatcctaacaattggagagatgacaaa +ttctagg---ttcccattacctattgacatgctgtacaccagcccgactgacagtttggtcgtccaacctca +aaatggcaggtgcacaattgaaggtgaattgcaaggtacaactcaattggtgactccaaacatttgttccct +tcgag-----------------------------------------gcgcaatcaccg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgaca----------------------------------accacaaa----------------- +----------tggcacatgacagtcacgagccctaatggtgccgcctttgacccaacagaggatgtgcctgc +ccccctgggcactccagatttcatagctgacatatatggggttctctcccaga---gaaatagatc---cat +cgaatct-----ggccagagtggtcctgcaaat--------aga-----------tctcatgaggctgttgt +ctccacacggagtcctaaatttacccctaaattaggttcagtaatgattgcca---------cttggaacac +caatgatat---tga---acttgagcccacca---------------------------aattcacaccta- +--------taggt------cttgagaatcccg------------gcccctttcaacaatggcggctaccaaa +ttactcaggagcc-ctaaca------ctcaacatgggacttgcatcatctgtattcccaacataccctggtg +aacaaattcttttcttccgttcatacattcccc------tcaaaggtggctt------tggaa--------- +--acacagccatagattgccttgtaccacaggaatgggtccagcacttctatcaggaatcagcccctgcaca +atcagatgtggcactacttaggtatgtgaaccctgagacaggacgtgtcctgtttgaggccaaactgcacag +acaaggtttccttacagttgctagatcaggtgaaagtcccatcaatgttcctgccaacggttatttcagatt +tgactcttgggttaaccaattctactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcttagcaggattggctggtgacatagtcacaaatagtgta +ggttctttagttaatgcagg---agctagtgcaatcaaccagaaaattgattttgaaaataataaatac--- +------------------------------cttcaaggagaatcttttaaacatgataaagaaatgctgaat +gcacaaattgaggctacaaagaaattgcagatggatatgataaacatcaaacaaggagttctttcagctggg +gggttctcacccactgatgcggctcgtggagccatcaacgctcctatgacaaaggttctggattggaatggg +actagatactgggcacccaatgctcctgtaacaacatcactgtctggtggcttcactggg------------ +ca-----------ggccgtacacaggcccacaccaaat---------------------------------t +ttggcag----------------caatcaaatcccaaagacaatg--------------------------- +-------------------------------------------------tcc---------------agtag +gggaacat-----------ctgtg------------agatcaaattcaactcaattgaccagt--------- +----------ctgggt-------tcccaatc------ttctggttcctcccgaagcagtgtgactaccgtga +gtagctcat------tgc--------------------------------ctt------------------c +aaccaa---------------------------------------caggactagagagtgggtgaaccaaca +aaatctcaatttggaacctcacctac---ctggatcactgaggacagcctttgtcactccaccatcgagcac +cgcttcc---agct------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattattta---- +atta-g-aac-taat------------------------------------ttcaatt------tggactaa +t------------tcgg---aaaatctttt------------------------------------------ +------------------------------------------------------------------------ +- +>MG674720.2/1-7578 |Norovirus GII isolate Hu/4/Fengtai/2017 nonstructural polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtattaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcaacactgcccctcagttaagatcgggaccaggacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaaaccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctagaaccaccggcttctttaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaattaaggacctattgggtaaacttaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacttttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcttccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacgaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctggaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +tggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttgtgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagagtcaccagaaattgagaaggtca +agagagacttccccggccagcctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatataactttgacaccaatagagtctctgcatttaggaagctggccgcagacaacaagt +atggaatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaggatctgaaagtta +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccagataccgagtctcttccaatg +gtaaaggttctgtctctgttgataaagttgaagaccaaatatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatgc +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccagggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaggtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatcttccgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcccccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggtttagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgttggtggccagatgggaatgctcctcacgggggcaaatgcgaagaacatggatcttggcaccggtcct +ggcgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccgaggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccgatcttgggtccaggcaaggcgcccaaactcagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaaaaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcaacccgtgtatacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggttggaatg +aacatgaatgaagatggccccatcatatttgacaarcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtgataactgaagatctcacc +ggcctaacgttcctgcgtagatcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaactcatggcccttctcggtgaggcttcactacatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttaccgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +caatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccctgactttgagttcacgttttt +ggtgccaccgactgtggagtcaaagaccaagcccttcacactccctattctgactcttggagagctatccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcagatgcacactagatggaacacttcaggggacaacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +ggttttaggtgccatagatttcaaaggaactgtttttggagtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattccggccac-ctcact------cttaacatgaatttggcacccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggctacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggctacttcaggtt +tgaggcctgggtcaatcaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtggaatatgattttaataagcag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgaggggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaacagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcagcccactttaccc---cgctctgagtc---------------------------c +ccaa-------------------aaatcaagattaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgtatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggccttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagta-- +-tctac-------------------cct--------------gtctaggactagtgattgggtgagaggaca +aaatgaaaggcttggcccgtttatgg---atggtgccctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaa- +------------------------------------------------------------------------ +- +>LC228948.1/1-7500 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Osaka246 POL, VP1, VP2 genes for nonstructural protein, capsid protein VP1, capsid protein VP2, partial and complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagtca-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagagaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgagtacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttagtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaagtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggcttgctgcatgagaggatggatgagtttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atggactggtggataccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctatcatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattctatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccact---agaccaaagcga--------gccagaggtcaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtattctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagagataaaaatccgccagc +gaatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctccgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggagaggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaagcgtgcgcttcacttgataaaaccacctctagtggacacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagactac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaacctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggcgatgatgtgtttacagtttcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttctaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtcctcttttgacccctctgaggacatccccgc +ccctctgggcatacctgactttcaggggagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgatactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctaaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactgttgaatgggtcagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------ggtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-ttt-------------------------------------------------------- +------------------------------------------------------------------------ +- +>MG557654.1/1-7236 |Norovirus GII isolate GII/Hu/ETH/2016/P3 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------ga----------------tcggcactgcccctcagttaagatcgggactaagacattaacagttcc +ccc-----------------------------tgaacccccaaatgg------tgaagac------accgtg +cagtttgacg----------cgaagtcggaaactgtgcgcgggttgccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactagagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagcttacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttcttcaaaccataccagtcttggaacaggaaacccct +tccaaccgttgacgatggaaagatcaagaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaatttgctgcacttgctcgcatcgtgtgactg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtgatcatgggtggcataggaatggttctcggctttaccgctgagaagataggccgtatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tacgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggaccagacccgtggttgtcatgatctcgggcagacctggtattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agacgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgacaggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +gaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagagtcaccagaaattgagaaggtaa +agagagacttccccggccaacctgatatgtggaaggatcattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggtaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaagcatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------gcagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggta---aatgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +ggatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtagact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagatccagattcataagtctggagagttctgcaggttcagattcccaagaccaatt +agaccagatgtcacagggcttgtactggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtaaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcaggtgtccacaccgcagca +gcccggggaggtaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcctaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaaccttttacagaacccaggggc +aagccacctaaacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaactattgac +cctgctaaaccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aatctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtatcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggtctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaagcttcactgcatggtccccagttttacaagaaagtt +agtaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagctcaaatcacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaataggttctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaaccgtggagtcaaagactaagccctttacactccctattttgactcttggagagctgtccaa +ctccagg---ttccccgctccgatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccgca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ccatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctaggtacaccccaaagcttggctctgtgttgat---gt---------attctgagtc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------acgattggcaccaatgggaattgcccga +atattctggtcat-ctcact------cttaatatgaatttggcccctgcagttgcccctgccttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ccgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaagagtgggttcagcacttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcaggtatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagtagtgcccccaaatggatacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---agccaatgcaattaaccaaaaggtagaatatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacaactccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagacgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgctctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatccactgctccttcac----------------- +---------------------aatcaactca---ctcgacggctttgactg-------cggg--------gt +ctagttc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtaagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgtt----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG557655.1/1-6349 |Norovirus GII isolate GII/Hu/ETH/2016/P4 nonstructural polyprotein and VP1 genes, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------gaactagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagctcaccactgtcagccaacc +gggagaaaccaacacggcgtttagtgttcctccgctcaaccaaagggagaacagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctgacaccactctctttgtactg +gagacctgtgtatacccccc---agtacctcatctctccagacactcttaggagactacatggggagtcatt +cccttacactgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatatttttgtgcaccttgtcttcactatttac +taggcccattaaggacataataggaaaattgagacctcttaacattctcaatattctggctacatgtgattg +gaccttcccaggcatagtggaatccctaatacttttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattatgagctgcaagggcctgaggaccttgcagtaga +actggttccagtggtaatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcatccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattctgaaattagt +catgaaatggttcttcccaaagagagaggaagaaaatgaattggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +cataagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaacgctctcctggcacgaatcgccgctgcacgctctctagtgcaccgggcgaaagaagaact +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcagcctctctcacaggggaccaacgtgtgggtctgatcccacgcaatggtgt +cgaccattgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgacgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ttcgaggcgcattgacttcctcgtgtatgcggaggctcctgaggtggaaaaggcga +aacgcgactttccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctcccttatcgcccgagcatcaggattactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctaatggacacaatgagagttgggaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtcgcgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgataaagtgcaaagtgccaccgtgcaaaccaacaatgaactagccggcgccc +tacaccacctgaggtgcgccagaattagatactatgttaagtgtgttcaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgcatga------acatacaaaatctctggt +ccaaaccacaggtggaagacacagaaga--------aacggccagcaaagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagcgatgaggagtacgatgagtaca +agagaattagagacgaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgtaaagaagagagggcctctctaggcttggtcacaggttcagaaa +tcaggaagagaaacccagaagacttcaaacccaagggtaagctgtgggctgatgatgacagaagtgttgact +acaatgagaagctcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctccatcaaacaaatccagatacacaaatcaggtgaattctgccgactgagattcccaaaaccaatc +aggactgatgtgacgggtatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcattaag +agaccaactggagagctcatgcctttggcagccagaatgggaacccatgcaaccatgaggattcaggggcgc +acagttggaggacaaatgggtatgctcttaacaggatccaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgtccctacatctacaaaagagggaatgattatgtggtcataggagtccatacagccgct +gcccgtggaggaaacactgtcatctgtgccacccagggtagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggtgcaccaatcttgggcccagggagtgccccgaaactcagtaccaagactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaaagccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgctggaatggggagtcctttacaggtaaattggcagatcaggcctctaaggcc +aacctgatgtttgaagagggaaagaacatgactccagtctacacaggtgcactaaaagatgaattggtaaaa +actgacaaaatctatgctaaaatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgggcttttgggggccttatggatgaactcaaggcacactgtgtcacccttcctgtcagggttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatatagatatcactatgatgctgattac +t-ccaggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccaaatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctccggggtaccttgcacctcccagtggaactccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagatcgtgagcacagatataaagctggacccagaaaagctgacagcaaaactc +aaggagtacgggttgaagccaacccgcccagacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggctggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccaaccgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggttatggctcttgaacctgtggctggggcgtccttagctgcccctgtgacaggccaaactaatataattga +cccatggataagaatgaactttgttcaagccccaaatggagaattcactgtttccccaagaaattcccccgg +agaagtactcctaaatttggaactgggtcctgaattaaacccttatctggcacacttatctaggatgtataa +tggctatgctggaggcatggaggttcagatcatgttagctgggaacgcgttcaccgc---tggcaaactgat +tttcgctgctgtgcccccacattttcccattgaaaatctgagccctccccaaattacaatgttcccacatgt +gattatagatgttaggactttagaacctgtgttgcttcccatgcccgacatcaggaattctttctttcactt +tatccagagggatgag---ccaaaaatgagattggtggcgatgctatatacaccactgaggtccaatggttc +tggggacgatgtattcacagtttcatgtagagttttgacccgccccactcctgattttgatttcacttactt +ggtgccaccaactgttgaatcaaagagtaaacctttcactctacctatattaacattgggagaattgacaaa +ttctagg---tttcccttgcccattgatgttttgtacactaacccaaatgaaaatgcagtggttcagtgtca +aaatggtaggtgcaccctggacggcgagctgcagggaacgactcaactcctaccaacaggcatctgtgcatt +taggg-----------------------------------------gcaaggtcactcagcaggtgc----- +----aggatgaccacag-------------------------------------------------gg---- +-------gcacac----------------------------------actggaac----------------- +----------------atgacagtgaccaacttgaatgggaccccatttgacccaactgaggacgttcctgc +cccactaggcaccccggatttctccggccaaatttatggggtgttaagtcaga---gaaacaccaacacagt +tcccgca-----gaaggaaatctcccggccaac--------agg-----------gctcatgaagctgtgat +tgcaacctacagccccaaattcacacccaaattgggcaatatccagcttagca---------cttgggaaac +ccaagatgt---ggaccctggacagcccacca---------------------------agttcaccccag- +--------ttggtctggcctctgtggatgctaact---------cccattttgatcagtggaccctccccag +ttattctggtgct-ttaact------ctaaatatgaacttggccccatctgtcgctcctgttttccctggag +agtgtctcctgttctttaggtctttcatcccat------tgaaagggggcta------tggga--------- +--accccgctattgattgcttgataccacaagaatgggtccagcatctttatcaggagtcagcaccatctct +tagcgatgtggctttagtgaggtatgtgaacccagaaactgggcgcaccctctttgaagccaagttgcac-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG572182.1/1-7518 |Norovirus GII isolate SDJN170450, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgtttgc------------aacaac +a------ac----agcgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttggt +gttgggtgtgcacaaaccacctgcagccataagcatggcgagagtggaactgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatactgaatatactggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggattacgagctgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttatccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccatagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +aggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagacgtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ctacaatcaccaccttcaatttcgaccggaacagaattacagcattcagacaattggctgcagaaaacaagt +atggactggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacatttgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctattatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaaggggcccccaagtcagaa-- +-gat-------gacg---agttcgtcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaata +agactggccgtggcaagaaacacactgcattctccagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaagagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtagtccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaatccaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggcggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaggtgtattggaagcggccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcaccctcat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagaggctgctctggggctctgacttatccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaagtaccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactggcagcagccttagaaatcatgg-tcaaattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccctgtctgaagtcaccaaactgtcccctgacatcatacaggcaaattccatgttt +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgagattttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgaaccggtggctggggcttccatagctgcccccctgaccggtcaaaacaatgtgataga +cccctggattagaatgaactttgtccaagccccaaatggtgagtttacagtgtccccccgcaattccccagg +tgaagtattgctaaatttggaattaggtcctgaattgaatccattcttggcgcacctttcaaggatgtacaa +tggttatgcagggggggttgaagtgcaggtgctgctcgctgggaatgcgtttacagc---gggaaaattggt +ttttgcagcaatccctccacattttccccttgaaaacttgagccctggacaaattactatgtttcctcatgt +gattattgatgttaggacgttagaacctgtcctcttacctctcccagatgttagaaacaacttcttccatta +caatcagcaacccgaa---ccccgaatgaggcttgttgctatgttgtatacccctcttagatctaatggttc +tggtgatgatgtgtttacagtttcttgcagggttctcacccgcccttctcctgactttgattttaactattt +ggtccccccaacagtggagtccaaaacaaaaccattcaccctaccaattttgactattggggaattgtcaaa +ttctagg---ttcccagctccaatagatgaactgtacaccagccccaatgaaggagtggtggtgcaaccaca +aaatggtagatcaacactcgatggtgaactactgggcaccacacaacttgtgccttcaaacatttgtgcgat +gcgag-----------------------------------------gacgcatcaatgccc----------- +-----------aagtgcc------------------------------------------------ag---- +-------acgatc----------------------------------accat-------------------- +-------caatggaacttgcaggtcacaaatacaaatgggacccccttcgatcccaccgaagatgtccctgc +accattgggcacgccggacttcctggcaaacatctatggagtcaccagtcaga---gaaacccag------- +----------------------acaacacctgt--------cgt-----------gcccacgacggggtttt +ggcaacttggagccctaagttcacacccaagttaggatccgttgtcctaggtg---------cctgggaaga +cagagactt---tgatctcaaccaacccacaa---------------------------ggttcacacccg- +--------ttggattg---------tatgatacagaacat---------tttgaccagtgggtcctgcccaa +ttactctggaaga-ttgacc------ttgaacatgaacttggcaccctctgtatctcccctctttccaggtg +aacaaattctcttctttaggtcccatatacca------cttaagggaggcac------ttcta--------- +--atggtgccattgactgcctgcttccccaggaatggattcagcatttctaccaggaatcagccccgtcacc +cacggatgtggctctaattaggtataccaaccctgacacaggtcgagtcttgtttgaggccaaattgcacag +acaggggttcattacagtggcaaattctggttctagacctattgttgttcctcctaatggttattttagatt +tgattcttgggttaatcaattttattctcttgcccccatgggaactggtaacgggcgtaga---------ag +ggtac---------agtaatggctggagcttttatagcaggtcttgctggtgacatagtcaccaatggcatt +gggacactggtaaatgctgg---ggcaaatgcaataaatcaaaaggtagattttgaaaataacaagcaatta +caacaag---------------------------------cctctttcaatcatgataaggaaatgttgcaa +gcccagattttggcaacaaaacagttacaggctgatatgattgctctcagacaaggggtgttgaccgcgggc +ggcttctctcctactgatgcagcaaggggggcggttggtgcacctatgacgcaagtcttggactggaatggg +actaggcattgggcccctggagccacaaaaacaacatctttctccggtgggttcactagctct--------- +tc---------------------ccatgctagaactcttgatttgccaaagaaaacaacagctgcacca--- +accccga----------------tgcctgtatctagac--------------ccag---------------- +------------------------------ttcttttgcttctacagttcct------------------ac +tcgctcaa-----------cagtc------------attggtgggtcttctaatc----------------- +-------------ccc-----cttcctcgat------caggagctcttc-----------ta--------gt +-------------------gtttcttcccaatctactccc------------t------------------c +ttcttc---------------------------------------tcgggttagtgaatgggtgcaaaatca +gaatagggcactggagccgtacatga---ggggagcgctacaaacagcttacgtgacgcccccctccagtag +ggcttcc---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------ttaacacccacagacagccgctcttcgctc +atctccgccggagaggggagtcaca--------ggcttag--t-----------gaaaaga----------- +---t-a-att-tt---------------------cttcttt----------tc-------------ttcttt +g-g---aaaatt-t--t---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG495077.1/1-7259 |Norovirus GII strain Hu/PE/2012/GII.PNA1-GII.NA1/Loreto0959 nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------ccaccgcccaatgg------agaggacattgtcatcaag +tataccaaaa----------agga---ggagaagatcagcggagtacccaccgtctcaactgtggacatttc +ccccctgcatgacaccgcatatagtgtcccccctctagaccagagagagaaggtggacgcaaaggaaccctt +aacaggttcgatacttgagatgtgggacggtgaaatctaccactatggcctttatgtggagaggggtatggt +tctaggcgtgcacaaaccaccatccgctttgagcttggcgcgtatcgaactaactcctctctccctctactg +gaggactgtttacacaccac---cctacctagtcgctccagacaccctcaagaagctccatggtgagtcttt +cccctacacggcctttgacaataattgctatatgttttgctgctgggtactagacttgaatgactcatggct +taa---caggaagcatgtgtcaagaaccacgggtttctacagaccctaccaagaatggaataggaagccttt +gccaaccatggatgagggcaaactcaagaaagtggccaacgtgttgttatgtggcctctccggtctgttcac +caggcccatcaaggatctcataggcaagttgagaccgctaaacatactcaacatcatatctaactgtgattg +gaccttccccggtgttgttgaagccctcatcctgcttgcagagctcttt---ggcatcttctggacccctcc +agacatatcagcttttgtcgcctccttgctgggtgactatgagttgcaaggccctgaggacatcgcaaccga +gatcgtgcctgtcgtcctcggtggtattggcatggttcttggtttcactaaggagaggattggccggctatt +gagctcagccgcatcatcgctacgagcatgtaaagagattggcaactatgggatagaggtggttaaactaat +aatgaaatggttcttccccaccaaaaatgaagtcaatgagatggagatggtgagggcaatagaggatgcagt +gcttgattttgaggcaatagagaacaaccacatgacaaccctgctcaaagacaagaacagcttggccacttt +ccttagagcgctggatatggaagaagagaaggcgcgaaaactgtcaaccaaatccgcgtccccagacatagt +tggtaccataaactccctcctagccagaattgctgccgccaggtccctagtccacagggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcatcatgttatctggacgacctgggatagggaagactcacttggcacg +tgatctggccaagaagatggcggcgactctcacaggtgaccagagagtagggctcgtcccaagaaacggtgt +tgaccactgggatgcgtacaaaggagagaggattgttctttgggacgattatggcatgagtaaccctgtaca +ggatgctcttcgccttcaggagcttgcggacacctgccctctgacactcaactgtgacagaatagaaaacaa +gggaaaagtgtttgacagtgacaccataatcatcacaaccaacttgcaaaatccggccccacttgattatgt +gaactttgaggcatg-ttcccgccgagtcgacttcctcgtctatgcggattccccaacagtcgacaaagcaa +agagggacttccctggccaaccagacatgtggaaggatgccttcaaatcagatttctcacatataaagttac +aattggcaccacaggggggattcgacaggaacgggaacaccccgcacggtaagggggtcatgaaaactctca +ccacacactccctaatagccagagccaccgggctgcttcatgaaagactggatgaatttgacctgcagggcc +cagaattaccactgtacaattttgaccacaacaaggtggccgctttcaggaagcttgcagctgacaacaaat +atggtttcatggagaccataaaggcaggcaacaagttgaaggaagttaagacccttgaccagttcaaagagg +ctgtgaaggacatacgcataaaaccttgcagaataatctacaattccacggcctatgatctagaatcaagtg +gatctgggagagtcactgtgaagagagtgggggaccataaagtccaagcccacaatgagctccattctgccc +ttaacaacctacgcaaggccaggattaggtactatgttaaatgcttccaagagatgatctattcgctcctcc +aaattgctggagcggcttttgtcacctcgaggatgacacagaggatga------acatcaacaagctgtggg +ccaagcctga------------gaggca--------cgtggaaactcccgtagaacccccaaccccaccg-- +--------attgagg---actggactataaatccaattgacacagtccaggaaggcaagaagggtaaaaaca +agagtggcaggggcaagaaacacactgcattctccagcaagggtctcagtgatgaggagtatgatgaataca +agagaatcagagaagagagacaagggaaatactccatagaagaatacctccaggacagggaccgatat---t +atgaagaattggccatagccaaagccactgaagaaaatttctgtgaagaggaagaggttaaaataaggcaga +gaatcttcaggccaaccagaaaacaacgcaaagaggagagagcctcattgggtctggtcacaggcagtgaaa +tccggaagaggaacccagatgacttcaaaccgaaaggaaaactgtgggctgacgatgaccgcagcgtcaact +acaatgagagaatagactttgaggcccctcccagcctgtggtccagaatagtcaactttggttcgggctggg +gcttttgggtttctt-ccaacctgttcatcacctccacacatgtcatcccaccgggcataacggaggccttt +ggagtgccaatgaaccaaatccaaatccacagaagtggggagttttgcaaaatgagattccctaaagccatc +aggcctgatgtgtctggaatgatcctcgaggagggagcacctgaagggacagtaacaaccatactgattaag +agaacaactggagagctcatgccattggcagcccgcatgggtacccacgccaccatgaaaatccagggaagg +atgatcggaggccagatggggatgctcctcacaggatctaatgctaagaacatggacctcggcactgtcccc +ggtgactgtggctgcccatatgtctacaaaagaggcaatgactgggtggtcataggggtgcacaccgctgct +gccagaggcggcaacacggtaatatgtgccacccagggtccagatggtgaagccacactcgaggggggagac +aaccacgggacatactgtggggcaccaatcctgggtccagggagcgctccaaaactcagcactaaaaccaaa +ttctggaggtcctccaatgaaccactcccccccggcacgtatgaacctgcctaccttggtggaaaagatcca +agagtcaaaggtggaccttcactacaacaagtcatgagggaacaactcaagcctttcaccgctcctcggggg +aaaccgccgagaccagcaaccctggaagccgccaaggaaaccatctgcaacgtgcttgagcagaccattgac +ccaccccagaagtggtcatacacacaagcatgtgcctctctggacaagacaacatcaagtggacacccccac +cacaaaaagaaaaatgacaactggaacggtgaatcctttactggcgttctggccgatcaagcatcaaaagca +aatctcatgtttgaacaaagaaaacacatgcaacctgtgtacacagccgcgctcaaggatgaacttgttaag +accagtaaaatctatgacaacatcaaaaagaggctcttgtgggggtctgatcttggcacaatgatccgctgt +gcaaggtcatttggagggctcatggatgaaatgaaggccaactgtgtgagacttcccgttagggttggaatg +aacatgaatgaagatggacccattatctttgagaaacattcaaaatacaaatatcattatgatgctgactac +t-ccagatgggattcaacccaacaaaggtgcatcttgggtgtcgcattggaaatcatgg-ttaggttctcag +ccgaacctgaatt-ggcacaaatagtggctgaggaccttttgtcgcccagtgtggtggatgttggcgacttc +aagatcacaataaatgaaggtctaccctcgggtgtcccctgcacatcccaatggaattcaattgctcactgg +ctattaacactgtgtgccatgtcagaagtatcagggctatcccctgacgtggtgcaatcaaattcttgtttc +tccttctatggggatgacgagatagtcagcacagatataaaattggacccacaaaaattaacagataagttg +agagagtatgggctaattccaacccgacctgacaaaactgaaggaccactcgtgattaaagagagtttggag +ggtttgacatttctaaggagagacatatgtagggacccagctggctggtatggcaagctcgaccagtcatca +atcatgaggcaaatgtactggaccaaaggacccaaccatgaggaccccaatgaaacaatgatcccacactcc +cagagaccaatacaactgatgtcccttctcggtgaggctgcccttcatgggcccgcattctacaaaaagatt +agcaaattagtcatcaccgagctcaaagaaggtgggatggatttttatgtgcccaggcaagaaccaatgttc +aggtggatgagattctctgatttgagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggcgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagttgcaggaggagcgatcgccgcccccctaactggacaaacaaatttcattga +tccctggattagaaataattatgtacaagcgcccaatggtgaattcactgtgtccccaaggaattcccctgg +tgaaattttgctcaatttagaattaggccctgaacttaatccattcttggcccatttatctagaatgtataa +tggatatgctggtggcattgatgtccaagtcatcatggcgggcaacgccttcaccgc---tggaaagatcat +cttcgcagcagtgccacctcattttcctattgataacatcagccccccacagataaccatgtttccccatat +tataatagatgtgagaacccttgaacctgtgaacattcccctgcctgatgtcagaaatagcttcttccatta +cagccagaacaacgag---ccccgcatgagattgttggccatgttgtatacccctctcagatcaaatggctc +tgcagacgatgtcttcacagtatcctgcagggtcctgaccaagccttctgcagattttgaatttaattattt +ggttcccccaactgttgagtccagaactaaacccttcaccataccaatactcacaattggagaaatgacaaa +ttcaaga---ttccctgtggccattgacatgctgcacaccagccccactgacaattttattgttcagccaca +aaatggcaggtgcaccctggatggtgagctgcaaggcaccactcagttggtcgcttcaaacatatgtgcctt +caggg-----------------------------------------ggtccatctcag-------------- +------------ggcacgagaa--------------------------------------------ca---- +----atggagatc----------------------------------aacatcag----------------- +----------tggcacttcagtatcaccaaccccaatggcactccatttgacccaactgaagatgtgcccgc +cccacttgggaccccagatttcaaaggtcaactctacggggtcatctcccaac---ggaatagagaaggaag +ctctggt-----aatggcaaccaaaaggccaat--------agg-----------tcccatgagggagtgat +ttcaacagtcgcaccaagattcacaccaaaattagggtcggtcatgattggca---------cttggaccac +tgatgatat---aca---agaccaaccatcta---------------------------gattcaccccag- +--------ttggg------ctgaatgatgatg------------acaattacaagcaatgggaattgccaaa +ttattctggggct-ctcacc------ctcaatatggggttggcaccttctgtcttccccacctaccctggtg +aacaacttcttttcttccgctcctacataccaa------tgaagggagggta------cggca--------- +--gtccttacattgattgtcttataccccaagagtggatttcccacttttaccaggaatcagccccttcaca +aacagatgtggctttaatcaggtatgtgaaccccgacacaggacgcgtcctgttcgaggccaaattgcacag +acaaggatacatcaccgtcgccaagactggtgacagccccattaatgtgcccgcaaatggttacttcaggtt +tgattcttgggttagtcaattttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---agctaatgttatcaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcatttgctcatgataaagaaatgttgaat +gcacaagttgaggcaacaaagaaactgcaggctgatatgattgccattaaacaaggggtcttgaccgctggc +ggtttttcccccactgatgcagcccgcggggctattaatgcccccatgacaaaagttttggattggaacgga +acaaggtactgggcacctaatgccaccaccacaacatcaatgtcaggtggtttcacaagc------------ +ca-----------ggtcatgcacaggcccacaccaaat---------------------------------c +ttaagac----------------aaaccaggcccccaaatccata--------------------------- +-------------------------------------------------ccg---------------agtag +tgggtctt-----------cggta------------agatccaactcaacccaactcaccagt--------- +----------ctgagc-------tcgcactc------atccggatcatctcggaccagcgggtctacagcta +tcagttccc------tac--------------------------------cgt------------------c +ttccag---------------------------------------caggactagggattgggttaaccagca +aaaccttaatttggaaccacatttgc---ctgggtctcttaaaacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------cgggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatctgcgt------------ttaacacacgcagacagccgctattcgcac +accttcgtagaaggggggagtcaag--------tgcatag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495078.1/1-7237 |Norovirus GII strain Hu/PE/2012/GII.PNA1-GII.NA1/Loreto1041 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------cccaatgg------agaggacattgtcatcaag +tataccaaaa----------agga---ggagaagatcagcggagtacccaccgtctcaactgtggacatttc +ccccctgcatgacaccgcatatagtgtcccccctctagaccagagagagaaggtggacgcaaaggaaccctt +aacaggttcgatacttgagatgtgggacggtgaaatctaccactatggcctttatgtggagaggggtatggt +tctaggcgtgcacaaaccaccatccgctttgagcttggcgcgtatcgaactaactcctctctccctctactg +gaggactgtttacacaccac---cctacctagtcgctccagacaccctcaagaagctccatggtgagtcttt +cccctacacggcctttgacaataattgctatatgttttgctgctgggtactagacttgaatgactcatggct +taa---caggaagtatgtgtcaagaaccacgggtttctacagaccctaccaagaatggaataagaagccttt +gccaaccatggatgagggcaaactcaagaaagtggccaacgtgttgttatgtggcctctccggtctgttcac +caggcccatcaaggatctcataggcaaattgagaccgctaaacatactcaacatcatatctaactgtgattg +gaccttccccggtgttgttgaagccctcatcctgcttgcagagctcttt---ggcatcttctggacccctcc +agacatatcagcttttgtcgcctccttgctgggtgactatgagttgcaaggccctgaggacatcgcaaccga +gatcgtgcctgtcgtcctcggtggtattggcatggttcttggtttcactaaggagaggattggccggctatt +gagctcagccgcatcatcgctacgagcatgtaaagagattggcaactatgggatagaggtggttaaactaat +aatgaaatggttcttccccaccaaaaatgaagtcaatgagatggagatggtgagggcaatagaggatgcagt +gcttgattttgaggcaatagagaacaaccacatgacaaccctgctcaaagacaagaacagcttggccacttt +ccttagagcgctggatatggaagaagagaaggcgcgaaaactgtcaaccaaatccgcgtccccagacatagt +tggtaccataaactccctcctagccagaattgctgccgccaggtccctagtccacagggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacgacctgggatagggaagactcacttggcacg +tgatctggccaagaagatggcggcgactctcacaggtgaccagagagtagggctcgtcccaagaaacggtgt +tgaccactgggatgcgtacaaaggagagaggattgttctttgggacgattatggcatgagtaaccctgtaca +ggatgctcttcgccttcaggagcttgcggacacctgccctctgacactcaactgtgacagaatagaaaacaa +gggaaaagtgtttgacagtgacaccataatcatcacaaccaacttgcaaaatccggccccacttgattatgt +gaactttgaggcatg-ttcccgccgagtcgacttcctcgtctatgcggattccccaacagtcgacaaagcaa +agagggacttccctggccaaccagacatgtggaaggatgccttcaaatcagatttctcacatataaagttac +aattggcaccacaggggggattcgacaggaacgggaacaccccgcacggtaagggggtcatgaaaactctca +ccacacactccctaatagccagagccaccgggctgcttcatgaaagactggatgaatttgacctgcagggcc +cagaattaccactgtacaattttgaccacaacaaggtggccgctttcaggaagcttgcagctgacaacaaat +atggtttcatggagaccataaaggcaggcaacaagttgaaggaagttaagacccttgaccagttcaaagagg +ctgtgaaggacatacgcataaaaccttgcagaattatctacaattccacggcctatgatctagaatcaagtg +gatctgggagagtcactgtgaagagagtgggggaccataaagtccaagcccacaatgagctccattctgccc +ttaacaacctacgcaaggccaggattaggtactatgttaaatgcttccaagagatgatctattcgctcctcc +agattgctggagcggcttttgtcacctcgaggatgacacagaggatga------acatcaacaagctgtggg +ccaagcctga------------gaggca--------cgtggaaactcccgtagaacccccaaccccaccg-- +--------attgagg---actggactataaatccaattgacacagtccaggaaggcaagaagggtaaaaaca +agagtggcaggggcaagaaacacactgcattctccagcaagggtctcagtgatgaggagtatgatgaataca +agagaatcagagaagagagacaagggaaatactccatagaagaatacctccaggacagggaccgatat---t +atgaagaattggccatagccaaagccactgaagaaaatttctgtgaagaggaagaggttaaaataaggcaga +gaatcttcaggccaaccagaaaacaacgcaaagaggagagagcctcattgggtctggtcacaggcagtgaaa +tccggaagaggaacccagatgacttcaaaccgaaaggaaaactgtgggctgacgatgaccgcagcgtcaact +acaatgagagaatagactttgaggcccctcccagcctgtggtccagaatagtcaactttggttcgggctggg +gcttttgggtttctt-ccaacctgttcatcacctccacacatgtcatcccaccgggcataacggaggccttt +ggagtgccaatgaaccaaatccaaatccacagaagtggggagttttgcaaaatgagattccctaaagccatc +aggcctgatgtgtctggaatgatcctcgaggagggagcacctgaagggacagtaacaaccatactgattaag +agaacaactggagagctcatgccattggcagcccgcatgggtacccacgccaccatgaaaatccagggaagg +atgatcggaggccagatggggatgctcctcacaggatctaatgctaagaacatggacctcggcactgtcccc +ggtgactgtggctgcccatatgtctacaaaagaggcaatgactgggtggtcataggggtgcacaccgctgct +gccagaggcggcaacacggtaatatgtgccacccagggtccagatggtgaagccacactcgaggggggagac +aaccacgggacatactgtggggcaccaatcctgggtccagggagcgctccaaaactcagcactaaaaccaaa +ttctggaggtcctccaatgaaccactcccccccggcacgtatgaacctgcctaccttggtggaaaagatcca +agagtcaaaggtggaccttcactacaacaagtcatgagggaacaactcaagcctttcaccgctcctcggggg +aaaccgccgagaccagcaatcctggaagccgccaaggaaaccatctgcaacgtgcttgagcagaccattgac +ccaccccagaagtggtcatacacacaagcatgtgcctctctggacaagacaacatcaagtggacacccccac +cacaaaaagaaaaatgacaactggaacggtgaatcctttactggcgttctggccgatcaagcatcaaaagca +aatctcatgtttgaacaaagaaaacacatgcaacctgtgtacacagccgcgctcaaggatgaacttgttaag +accagtaaaatctatgacaacatcaaaaagaggctcttgtgggggtctgatcttggcacaatgatccgctgt +gcaaggtcatttggagggctcatggatgaaatgaaggccaactgtgtgagacttcccgttagggttggaatg +aacatgaatgaagatggacccattatctttgagaaacattcaaaatacaaatatcattatgatgctgactac +t-ccagatgggattcaacccaacaaaggcacatcttgggtgtcgcattggaaatcatgg-ttaggttctcag +ccgaacctgagtt-ggcacaaatagtggctgaggatcttttgtcgcccagtgtggtggatgttggcgacttc +aagatcacaataaatgaaggtctaccctcgggtgtcccctgcacatcccaatggaattcaattgctcactgg +ctattaacactgtgtgccatgtcagaaatatcagggctatcccctgacgtggtgcaatcaaattcttgtttc +tccttctatggggatgacgagatagtcagcacagatataaaattggacccacaaaaattaacagataagttg +agagagtatgggctaattccaacccgacctgacaaaactgaaggaccactcatgattaaagagagtttggag +ggtttgacatttctaaggagagacatatgtagggacccggctggctggtatggtaagctcgaccagtcatca +atcatgaggcaaatgtactggaccaaaggacccaaccatgaggaccccaatgaaacaatgatcccacactcc +cagagaccaatacaactgatgtcccttctcggtgaggctgcccttcatgggcccgcattctacaaaaagatt +agcaaattagtcatcaccgagctcaaagaaggtgggatggatttttatgtgcccaggcaagaaccaatgttc +aggtggatgagattctctgatttgagcacgtgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggcgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagttgcaggaggagcgatcgccgcccccctaactggacaaacaaatttcattga +tccctggattagaaataattatgtacaagcacccaatggtgaattcactgtgtccccaaggaattcccctgg +tgaaattttgctcaatttagaattaggccctgaacttaatccattcttggcccatttatctagaatgtataa +tggatatgctggtggcattgatgtccaagtcatcatggcgggcaacgccttcaccgc---tggaaagatcat +cttcgcagcagtgccacctcattttcctattgataacatcagccccccacagataaccatgtttccccatat +tataatagatgtgagaacccttgaacctgtgaacattcccctgcctgatgtcagaaatagcttcttccatta +cagccagaacaacgag---ccccgcatgagattgttggccatgttgtatacccctctcagatcaaatggctc +tgcagacgatgtcttcacagtatcctgcagggtcctgaccaagccttctgcagattttgaatttaattattt +ggttcccccaactgttgagtccagaactaaacccttcaccataccaatactcacaattggagaaatgacaaa +ttcaaga---ttccctgtggccattgacatgctgcacaccagccccactgacaattttattgttcagccaca +aaatggcaggtgcaccctggatggtgagctgcaaggcaccactcagttggtcacttcaaacatatgtgcctt +caggg-----------------------------------------ggtccatctcag-------------- +------------ggcacgagaa--------------------------------------------ca---- +----atggagatc----------------------------------aacatcag----------------- +----------tggcacttcagtatcaccaaccccaatggcactccatttgacccaactgaagatgtgcccgc +cccacttgggaccccagatttcaaaggtcaactctacggggtcatctcccaac---ggaatagagaaggaag +ccctggt-----aatggcaaccaaaaggccaat--------agg-----------tcccatgagggagtgat +ttcaacagttgcaccaagattcacaccaaaattagggtcggtcatgattggca---------cttggaccac +tgatgacat---aca---agaccaaccatcta---------------------------gattcaccccag- +--------ttggg------ctgaatgatgatg------------acaattacaagcaatgggaattgccaaa +ttattctggggct-ctcacc------ctcaatatggggttggcaccttctgtcttccccacctaccctggtg +aacaacttcttttcttccgctcctacataccaa------tgaagggagggta------cggca--------- +--gtccttacattgattgtcttataccccaagagtggatttcccacttttaccaggaatcagccccttcaca +aacagatgtggctttaatcaggtatgtgaaccccgacacaggacgcgtcctgttcgaggccaaattgcacag +acaaggatacatcaccgtcgccaagactggtgacagccccatcaatgtgcccgcaaatggttacttcaggtt +tgattcttgggttagtcaattttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---agctaatgttatcaatcagaaagttgattttgagaataataaatat--- +------------------------------ttgcaaaatgcatcatttgctcatgataaagaaatgttgaat +gcacaagttgaggcaacaaagaaactgcaggctgatatgattgccattaagcaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcccgcggggctattaatgcccccatgacaaaagttttggattggaacgga +acaaggtactgggcacctaatgccaccaccacaacatcaatgtcaggtggtttcacaagc------------ +ca-----------ggtcatgcacaggcccacaccaaat---------------------------------c +ttaagac----------------aaaccaggcccccaaatccata--------------------------- +-------------------------------------------------cca---------------agtag +tgggtctt-----------cggta------------agatccaactcaacccaactcaccagt--------- +----------ctgagc-------tcgcactc------atccggatcatctcggaccagcgggtctacagcta +tcagttccc------tac--------------------------------cgt------------------c +ttccag---------------------------------------caggactagggattgggttaaccagca +aaaccttaatttggaaccacatttgc---ctgggtctcttaaaacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------cgggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatccgcgt------------ttaacacacgcagacagccgctattcgcac +accttcgtagaaggggggagtcaa------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495079.1/1-7224 |Norovirus GII strain Hu/PE/2013/GII.PNA2-GII.NA2/Loreto1257 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------aatgg------tgaagacatagtggtcaaa +tacaccagac----------aagg---tgatgtcatagagggggtacctgctgtctccacagtagacaaatc +tcccgtccacgacaccgcatatagcgtccctccattagaccagagggagaaggttgatgcaaaagaaccact +aactggatcaatccttgaaatgtgggatggtgagatttatcactatgggttgtatgtggagaaaggccaagt +tcttggcgtgcacaaaccaccagctgccataagctttgcacgtatagaactgaccacactctcactttattg +gagagtagtctacgcgccac---catacctagtggcaccagacacacttaagaaactccatggggaaaattt +cccttatacagccttcgacaacaactgctattctttttgctgttgggtcctggatctcaacgattcatggct +caa---tagaaaatttgtatcaagaaccactggcttttacagaccataccaggactggaacagaaggccact +acccacaatggatgatggcaaactcaagaaggtggctaacgtgctcctgtgtggtttatcaggtctcttcac +cagacctattaaagacctcataggtaaacttagaccactcaacatcctcaacatccttaccaactgtgactg +gaccttcccaggagtagtggaagccctcattctacttgcagagctgttc---ggggttttctggacaccacc +agacatatctgctttcgttgcctccctgttgggagactacgagatgcaaggccccgaagacatcgcatctga +agttgttccagttatcctgggaggtattggtatggttttagggttcacaaaagagaaaattggccgactgct +cagctcagctgcatcatcgctgagggcttgcaaggaaattggtaattacggaatagaagtggtgaagttagt +aatgaaatggtttttccctactaaaaatgaggctagtgagatggaaatggtcagaactatagaggatgctgt +gctcgactttgaggcgatagagaacaaccacatgacagcattgctcaaggataagaacagcctggccacttt +cctcagggcactggacatggaggaagcgaaagcccgaaaactgtcaaccaaatccgcatcaccagacatagt +cggcaccataaatgccctcttagccagaatcgcagctgccagatcactcgcacaccgggctaaagaagagat +gtcatccaggatgcgtccagttgtcatcatgatatctggacgcccaggtatagggaagactcacatggcacg +tgaattggcaaagaggatggcaacaacactctcaggtgaccagagagtgggtttagtaccaagaaatggggt +tgaccactgggatgcctacaagggagaaagaattgtcctgtgggatgattatggcatgagcaatcctgtagc +ggatgcattgagactgcaagaattggccgacacatgtcctttaaccctcaattgtgataggatagagaacaa +agggaaagtgtttgatagtgatgctttaattattaccaccaatctgtctggtcctgcccctcttgactatgt +caattttgaagcctg-ctcccggcgtgttgattttcttgtctatgcagagtcccctgatgtagataaagcaa +agagagactttcctggccaaccagacatgtggaaagatgcttttaaatcagacttctcacacataaaactgc +aactggctccacaggggggatttgacaagaatggaaacaccccacatggaaaggggatcatgaagtccctga +ccatacactctcttgtagcacgtgccactggtctcctgcacgaaagacttgatgaatttgacctccagggcc +ctgaactcccactatataattttgaccaaaacaaggtggctgcattcagacaacttgcagctgataacaaat +atagtttcatggacaccataagggccggtaacaaactcaaggaagttaagaccttagaacaattcaaggaag +ctgtgaaaaacatacgcataaaaccttgtaagataatgtataaccacactttatacgttctagactcaaatg +gatcaggaaaggtcactgtaaacaaggttgaaaatcacaaaatccaaaccaatagtgaactcaattcggcgc +taaacaatctacgcggcgctagaataaggtactatgtcaagtgtttccaagaaatgatttactcactactac +aaattgcaggagcagcctttgtcacaacaaggatggctcaacgactga------atgttaacatgctttgga +ctaagccgga------------aactca--------gaccagtgctcccacagagccacctgccccccca-- +--------gaacggg---actggaccatagcgccagtcgataccatgcaggaaggcaagaaaggcaagaaca +agagtggtagaggtaagaaacacactgcattctctagtaaaggcctgagtgatgaagagtacgatgagtaca +aaagaatcagggaagaacggcaaggcaaatactccatagaagaataccttcaagatagggacagatat---t +atgaagaattggccatagccaaagcaacagaggaagacttctgtgaggaggaagaggtcaagataagacaaa +gaatatttagaccaaccaagaaacagaggagagaagagagggccaccttggggctggtctctggcagtgaga +taagaaagagaaatccagatgacttcaaaccaagaggtaagttgtgggctgatgatgatcgtagcgtgaact +acaatgaaagaattgactttgaggcccccccaagtctttggtccaggatcgtcaactttggatcaggctggg +gtttctgggtctcat-caaatttgttcatcacttccacacatgtgatccctccgggggtgaaagaattcttt +ggagtaccaataaaccaaatccaaatacacaggagtggtgagttttgcaaaatgagattccctaaggcaatt +aggcctgatgtatctggcatggttcttgaagaaggcgcccctgagggaacagtggtgactgcgctgatcaaa +aggacaactggtgaactcatgccattggcagtacgcatggggactcatgccacaatgaaaatacagggtaga +atgattggcggtcaaatggggatgcttctcacagggtccaatgccaaaaatatggaccttggcacagtgcct +ggagactgtggctgcccttatgtctacaaaaggggcaatgagtgggttgtcataggagtgcacaccgcagct +gctagaggtggcaacacagtgatctgcgccacccaaggcccagatggtgaggccactctcgagggtggtgaa +aaccatgggacatactgtggggcacccatccttggaccaggcaccgccccaaaactcagcacaaagacaaaa +ttttggagatcatccactgcccctctcccaccaggaacttatgaaccagcctatctgggtgggaaggatcca +agaatcaaaggtgggccatcactccaacaagtcatgagagaccaattaaaacccttcaccgcgccccgcgga +aaaccaccaaggccagcggttctagaagccgcaaaagagacaatttgcaatgtgcttgaacaaaccattgaa +ccaccccaaaaatggtcctactcccaggcttgtgcttcattggacaagacaacgtctagtggttatccccat +cataaaaagaaaaatgacaattggaatggtgagtctttcaccggtgctctggcagaccaggcctcaaaagca +aacctcatgtttgaacaagggaaacacatgcagcctgtttatacagctgcacttaaagatgagcttgtcaaa +actagcaagatctatgaaagcataaagaagaggcttctctgggggtcggacttgggcacaatgatccgttgt +gcaaggtcttttggtgggctcatggatgaattaaaagcaaactgtgtgaatctaccaattagagttggcatg +aatgtgaatgaggatggacccataatatttgagaaacattcaaaatataaatatcattatgacgctgattat +t-ccagatgggactcaacacaacaaagaaacatcttgggggttgctattgaaatcatgg-tcaaattttcag +cagaacctgaatt-agcacaagttgtggctgaggaccttctgtctcccagcgtcgttgacgttggtgatttc +aaaattgccataaatgagggcctgccttcaggggtcccatgtacatcccaatggaactcaattgctcattgg +ctactaactctatgtgccatgtcagaagtgacaggactatccccagatgtgatccaatcaaactcatgcttt +tcattttatggggatgatgaaatagttagcactgatattaaattagatgcacaaaaattgactgacaaatta +aggcaatatggattggtgccaaccagaccagacaaaacagaaggaccattggtcatcagggaaagcttagag +ggcataaccttcctcaggagggacgtgtgcagagacccagcagggtggtatggcaagcttgaccaatcctca +atcatgaggcaactgtattggaccaggggacctaatcatgaagaccctaatgaaactatgattccacattcc +caaagacctgtgcaacttatgtcactccttggtgaagcagctcttcatgggccaactttctacaaaaaggtt +agcaaattggtcatcactgaactcaaagaaggtggaatggacttttatgtgcctagacatgaacccatgttc +aggtggatgagattctctgatctaagcacttgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccggtggcgggaggagctatcgcagcccccttaaccgggcagacaaatttcattga +tccctggattagaggtaattatgtgcaagcacctaatggtgaattcacagtatcccctagaaactcacctgg +tgaaatcttacttaatttggaattaggtcctgaacttaacccatttctggcccatttatctagaatgtacaa +tgggtatgctggtggcattgatgtccaagtcatcatggcaggtaatgccttcactgc---tggcaagatcat +ctttgctgcagtgccgccccacttcccagttgaaaatattagtccccctcaaatcaccatgttccctcatat +tatagtagatgtgagaactcttgaaccaataaatatccccgtacccgatgtcaggaacaacttctttcatta +taatcaggatagggat---tcccgtatgaggttggtggctatgttgtacactccccttagatcaaacggttc +cacagatgatgtgttcacagtgtcatgcagagtcctaacaaaaccttcagcagattttgagtttaattactt +ggtccccccaacagttgagtcaagaactaagcccttttcaataccaatactcacaattggagaaatgacaaa +ttcaagg---tttcccttgcccattgacatgttgtacaccagcccaactgaaaatttggtagtccaacccca +aaatggcaggtgcacgactgaaggtgaactgttgggcactactcaattggtaactccaagcatttgctcact +tcgtg-----------------------------------------gagcgatcactg-------------- +------------gtcacgaagg--------------------------------------------ca---- +----atgatgatg----------------------------------atcacaaa----------------- +----------tggcacatgacagtcacaagccccaatggtgccgcttttgacccaacagaggatgttcctgc +tccccttggtaccccagacttcacaggtgatatatatggagtgctctctcaaa---gagacagaaa---cat +taatcct-----ggccaaactgcccccgcaaac--------aga-----------gcccatgaagctgttgt +ttctacaagaagtaacaagttcacaccaaaattgggctctgtaatgattgcta---------cctgggaaac +tacagatgt---tct---tcaacaacctacca---------------------------aattcacccctg- +--------taggc------ctagagagtccca------------atcactacaaccagtggcaactaccaaa +ttattcaggggca-ctgaca------ctcaacatggggctcgccccatctgtgttcccaacataccccggcg +agcaaattcttttcttccgctcgttcatcccac------tcaaaggaggtta------tggaa--------- +--attcagcaatagattgtcttgtgccacaggaatggatccaacatttctatcaagaatcagccccctcaca +aactgatgtggctttaatcaggtatgtcaaccccgaaacaggacgcgtcctgttcgaggccaaattgcacag +acaaggattcatcaccgtcgccaaaaccggtgacagccccatcaatgtacctgctaatggttatttcagatt +tgactcttgggtcaacccattttactcacttgcccccatgggaactgggaatgggcgcaga---------ag +gaatc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---tgctaatgctattaatcagaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcatttgctcatgataaagaaatgctaaat +gcacaagttgaggcaacaaagaagctgcaggccgacatgataaacatcaagcaaggagtcttgaccgctggc +ggcttttctcctactgatgcggcccgtggagctataggagctcctatgacaaaagttttagactggaatggg +acaaggtactgggcaccaaatgccaccacaacaacttcaatgtcaggtggcttcacagga------------ +ca-----------aactgtgcacagagccccaccaaat---------------------------------t +tcaaaac----------------caatcagactcccaaaagtata--------------------------- +-------------------------------------------------ccc---------------agtag +tggatcat-----------cagtg------------agatcaaattcaacccaactcaccagt--------- +----------ctgagc-------tctcactc------ctctggttcatcacgatccagtggatccacagtga +tcagctcct------tac--------------------------------cgt------------------c +ctccag---------------------------------------taggactggggagtgggtcaggcaaca +aaaccgcaatctggaaccatacttac---ctggatccctcagaacagcttatgtcacaccaccatcaagtgc +agcctct---agct------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggagatctgcgt------------ttaacacgcgcagacagccgctatttgcac +accttcgtagaaggggg------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495080.1/1-7395 |Norovirus GII strain Hu/PE/2011/GII.P23-GII.23/Loreto6422 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +-----------------------------------------------------------cagcacaaacagt +gaaattcac----aacaaagatgaaaatacaacatcaaac------------------ctatttgccaacat +gactgttggcataaagaggg----ctctaggggcgagaccaaaacagtccgcccttggagcccaaacagcta +acaagaatgggaga-----------------------------------------------accactatccc +tcccatacccc--------------------ccccacctccaaatgg------tgaggacatagtcatcaag +tataccaaac----------aagg---ggatacagtcagtggagtgcccaccgtctccactgcagacatatc +cccattgcatgacaccgcatatagtgtcccccccttggaccagagagaaaaggtggacgcaaaagaacccct +aactgggtcaatacttgagatgtgggatggtgagatctaccattacgggctctatgtggagagagggcaagt +tctcggtgtgcacaaaccaccagctgctatgagcattgcacgcatcgaactgacccccctctctctatactg +gagaacagtttacacacctc---cctacctggtagctcctgacacccttaagaagctccacggtgagacatt +cccctacacagcatttgataacaactgctactcattttgttgttgggttctggacctgaacgactcgtggct +caa---tagaaaattcgtgtcaaggaccacaggcttctatagaccctaccaagagtggaacaggaaaccatt +gccaaccatggacgagggaaaacttaagaaggtggccaacgtcttcctgtgtggcctgtctgggcttttcac +caggcccatcaaagatctcataggcaaactgaaaccactgaacattcttaacattgtcaccaattgtgattg +gacgttcccgggagtcgtagaggcgatcatcctcctcgcagagctcttt---gggatcttctggacaccacc +agacatatctgccttcgtcgcctctctgttaggtgactatgagatgcaaggccccgaggacattgcgaccga +gatagtcccagtcattctaggtggcattggcatggtacttggtttcaccaaagagaagatcggccggttgct +gggttccgcggcatcatcactcagggcctgcagggaaatcggcaactatgggatagaggtggtaaaattggt +gatgaaatggttctttccaaccaaaagtgaggtcaatgagatggaaatggtcagaacgatagaggacgcagt +gctcgactttgaggcaattgaaaacaaccacatgacagctctactcaaagacaaaaatagtctggccacctt +cctcagggcattggatatggaagaagagaaagcgcggaaactatcaaccaagtccgcgtcccccgacatagt +cggtactataaatgcactcctggcgagaattgccgctgctaggtcactggtgcacagggctaaggaagagat +gtcatcaaggatgcgtcctgttgttatcatgatatccgggcgacctgggatagggaaaacccatctggcccg +cgacctagctaagaagatggcagccactctgtcaggtgatcagagagtaggtctggttccaaggaatggtgt +tgaccattgggatgcatacaagggagaaaggatcgtcctgtgggatgattacggtatgagcaaccccgtggc +agacgccctccgactccaggaactcgccgatacatgccccctgacactcaactgtgataggatagagaacaa +aggaaaggtctttgacagtgacaccttgatcatcactactaatctggccaacccggcccccctggactatgt +gaactttgaagcttg-ctcacgccgcatagatttcctcgtttatgcggactctccttcagttgataaggcaa +agagagacttcccaggtcaaccagacatgtggaaagacgccttcaaaccagacttctcacacataaagctac +aactggcaccacagggagggtttgacaagaatgggaacaccccgcatgggaagggcgtcatgaaaacactaa +ccacacactccctcatagcccgtgccactggtttactccatgagagattagatgaatttgacttacagggtc +aagaattgccagtctacaacttcgaccagaacaaggtggccgctttccggaaactagcggccgacaacaagt +atggtctcatggacactttgagggcaggcaacaaactgaaggaggttaagaacctagaccaattcaaggaag +cggtgaaggacatccgcataaagccttgcaggataatctacaactcaatggcttatgatctggattcaaatg +ggtcaggcagagtcaatgttaagaaagtgggagaccaaaagatccaggccaacaatgaactcaactccgcac +tcaacaaactgcgcggggctagaatcagatactatgtgaagtgcttccaggaaatggtctactcccttctcc +agattgctggtgcggccttcgttacatcaagaatggcacaaagaatga------atgtcaacaaactgtgga +caaaaccaga------------aaaaca--------actggaggcctctgtagggccccccaccccccca-- +--------actgaag---agtggaccataacaccaatggacacgatccaggagggtaagaagggcaagaaca +aaagcggtaggggcaagaaacatactgcattctctagtaagggccttagtgatgaggagtatgatgagtaca +agagaatcagggaggagcgccaagggaagtactccatagaagaatacctccaggacagggaccggtac---t +atgaagaattggccatagccaaagcaacagaggaggacttctgtgaagaggaggagatcaagataaggcaaa +gaatcttccgcccaaccaggaaacagcgtagggaggagagagccactctaggccttgtcacaggcagtgaaa +ttagaaagaggaaccccgatgatttcaaaccaaaaggaaaactgtgggctgatgatgaccgtagtgtcaact +acaatgaaaggatagactttgaagcccctcccagcctctggtccagaatagtcaacttcggttcgggttggg +gcttctgggtctcat-caaatttgttcatcacctccacacacgtcatcccacaaaacatgtccgaggctttc +ggggtaccaataagccaaattcaaatacataggagtggagagttctgcaaaatgaggttcccaaaggccatc +aggcccgatgtctctggcatgattcttgaggaaggcgcgcctgaaggcacggtggtgaccatattgatcaaa +agaccaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaaatacaggggagg +atgattggaggtcaaatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtgcct +ggtgactgtggctgcccttatgtctacaaaagaggcaatgactgggtagttatcggggtgcacaccgccgcc +gccaggggtggcaacacggtgatctgtgccactcaggggccagatggtgaagccacacttgagggtggcgac +aaccatgggacctattgtggtgcgccaatattaggaccaggaaacgccccgaaactcagcaccaagaccaaa +ttctggaggtcctccaacactccgctcccccctggcacatacgaaccagcctacctcggtggtaaggaccca +agggtcaagggcggcccatcactacaacaagtcatgagggagcaactcaagcccttcactgccccacgtgga +aaaccaccaaggccagcggttttggaggccgctaaggaaaccatctgcaacgtgctggagcaaaccattgaa +ccgccccagaagtggtcctatgcacaggcttgtgcttccctagacaaaacaacctcaagtggccacccccac +cacaagaagaaaaatgacaattggaacggggaatccttcactggtgttctggctgatcaggcttcaaaagca +aacctcatgtatgagcaagggaaacacatgcagcctgtgtacacaggcgcactcaaagatgagcttgtcaaa +accagcaagatctatgaaaccattaagaagagactcttgtggggttcagacctcggcacaatgatacgctgt +gccaggtcatttggtggtctcatggatgaaatgaaggcaaactgtgtgaacctaccagtcagagttggcatg +aatatgaatgaagatggtcccataatctttgaaaagcattcaaagtacagatatcactatgatgctgactat +t-ccaggtgggactcaacacaacagagatgtgtcctgggtgctgcacttgatataatgg-ttagatactcag +ccgaaccagaatt-ggcacaaatcgtggctgaggacttgctgtcgcctagcgtcatggacgttggcgacttc +aaaatcaccataaatgagggcttaccatcaggagttccgtgcacatcccagtggaactcaatagctcattgg +ctgttaacactctgtgccatgtcagaagtctcaggactgtcaccagatgtggtacagtcaaattcatgcttc +tccttctacggggatgatgaaatagtcagcactgacatcaaattggacccccaaaaactgactgacaagttg +agagagtatggcttaattccaactagacccgacaaaacagagggaccacttataatcagagagagtctagaa +ggcctaacattcttaaggagggatgtgtgcagagacccagcaggatggtatggcaaacttgaccaatcatca +atcatgagacagttatactggacaaaaggacccaaccacgaggaccccaatgaaacaatgatcccacattcc +cagaggccagtgcaattgatgtccctacttggtgaggcggccctacacggaccgacattctataagagagtt +agcaagttggtcatcactgaattaaaggaaggtggaatggatttctatgtgcccagacaagaacctatgttt +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtggcgggaggagcaattgcagccccactaactggacaaacaaatttcattga +tccctggattagaggtaattatgtgcaagcaccaaatggtgaatttacagtgtcccccagaaattcgcccgg +tgaaattttgcttaatttagaattaggtcctgaactcaacccattcttgtcccatctatctagaatgtacaa +tgggtatgctggcggtattgatgtccaagtcatcatggcaggcaatgccttcaccgc---tggtaagatcat +ctttgcagcaatacctccccacttccccgtggaaaatcttagtccccctcagatcactatgttccctcatat +tatagtggatgtcaggacccttgaacccataaatatccctgtaccggatgttaggaacaacttcttccatta +taatcaaaataatgag---tctcgcatgagactggtggccatgttgtacacccctcttaggtctaatgggtc +tgctgaagatgttttcacagtgtcatgtagggtcttaacaaaaccatctgcagactttgaatttaattatct +agtccccccaactgtagagtcaaggactaaacccttcacaataccaatactcacaattggggaaatgacaaa +ttcaaga---ttcccagtgcctattgacatgcttcataccagcccaacagaaaacattgttgttcaaccaca +aaatggcaggtgcaccatagatggtgagttgcttggcaccactcaactgatcacttccaatatctgttcgtt +cagag-----------------------------------------gatccatctcgg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatggcc----------------------------------aacacctg----------------- +----------tggcacttcaacatcacaaaccccaatggcactccatttgaccccactgaagatgtgcctgc +ccccctcggaaccccagatttcaggggtcaattgtatggtgtcatctcccagc---gagatagagagggaat +accctcg-----gaaaacaatcagaaggcaaac--------agg-----------tcccacgagggagtgat +ttcaacaatctcaccaaaatttgtccccaagttaggttcagtcatgattggca---------catggactac +tgatgatat---caa---gaatcagccatcca---------------------------agttcaccccaa- +--------ttggc------ctcaatgatgatg------------ataattttaaacaatgggaattgccaaa +ttattctggggcg-ctcacc------ctcaacatggggttggcacctagtgttttccccacctatcctggtg +aacaaatccttttcttccgctcttatcttccaa------tgaagggagggta------cggta--------- +--gtccatttattgactgcctagtgcctcaagaatgggtcgctcacttctaccaggagtcagcacccgcaca +aacagatgtggccctaatcaggtatgtaaaccccgaaacaggacgtgtccttttcgaggccaaattgcacag +acaggggttcatcaccgttgccaagagcggcgacagccccatcaatgtgcctgccaatggttattttaggtt +tgattcttgggttaatcagttttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctctagttaatgcagg---agctaatgctattaatcagaaaattgattttgagaataataaatat--- +------------------------------ttccaaaatgcatcatttgcccatgataaggatatgctgaat +gcacaggttgaggcgaccaagaaacttcaggctgacatgattgccatcaagcaaggggtattagtcgcgggc +ggcttttcccctactgatgcagctcggggagcaatcaacgcccccatgacaaaagctctagattggaatgga +acaaggtactgggcgccaaatgccacctccaccacttcaatgtcaggtggcttcacagga------------ +ca-----------ggtttcgcacaggaccacaccaaat---------------------------------t +ttaaaac----------------caaccaggcccccaagccccca--------------------------- +-------------------------------------------------cct---------------agtag +tgggtctt-----------cagta------------aggtccaactcaacccaactcactagt--------- +----------ctgagc-------tcccactc------ctctgggtcatctcgatccagcggatcaacagtgg +ctagctctt------tgc--------------------------------cct------------------c +ttctgg---------------------------------------caggactagggattgggtcaatcaaca +aaatctcaatttggaaccacatttgc---ctgggtctctcagaacagcttttgtcactccaccatctagttc +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatctgcgt------------tcaacacacgcagacagccgctttttgcac +accttcg----------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495081.1/1-7241 |Norovirus GII strain Hu/PE/2014/GII.P24-GII.24/Loreto6424 nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------caaatgg------tgaggacatagtaatcaag +tataccaaac----------aaga---ggacacggtcagtggggtgcctagcgtctccaccgtagacatatc +ccctccacatgacactgcatacagtgtcccccccctggaccaaagggagaaggtggatgcaaaagagcccct +gactggttcaataatagagatgtgggacggtgagatctatcattatgggctctacgtagagaaggggctagt +tcttggcgtgcacaaacccccagctgccatgagcattgcgcgcatcgagctaacccctctctctctgtactg +gagaacagtatacacacccc---cttacctggttgcccctgacacccttaggaaactccatggtgaaacctt +tccctatacagcatttgacaacaattgttactcattctgttgctgggttttggacctgaacgattcctggct +caa---cagaaagtttgtgtctcgaaccacgggcttctacagaccctaccaagattggaacagaaaaccaat +gccaaccatggacgagggaaaactcaagaaagtggccaatgtgttcctgtgcggcctgactgggctgttcac +caggcccatcaaagacattataggtaagttgaagccgctgaatttccttaacatcgttgccaactgcgactg +gaccttccctggcgttgtggaagcaataattctcctctcagaacttttt---ggcatcttttggacaccacc +agatatatctgctttcgttgcctccttactaggtgactacgaaatgcaaggccctgaagacatcgcaaccga +gatcgttccagtcatcctcggcggtattggtatggttctaggcttcaccaaagagaaaattggccgactgct +gggctctgcggcatcatcccttagagcatgcagagagatcggcaactatgggatagaggtggtgaaactggt +aatgaagtggttcttcccgaccaaaagtgaggttaatgagatggaaatggtcagaacaatagaggatgcagt +gcttgactttgaggcgatagagaacaaccacatgacagctttactcaaagacaagaacagtctggccacctt +tctcagagcactagacatggaagaggaaaaggcgcggaaactgtcgaccaaatccgcctcacctgacatagt +cggcaccataaacgcactcttggcgagaatcgccgctgccagatccctagttcacagggccaaggaagagat +gtcatctaggatgcgtccagtcgtcatcatgatttctgggcgacctgggattgggaaaacacacctggcacg +cgacctggccaaaaagatggcggccaccttatcgggtgaccagagagtgggccttgtcccaagaaacggtgt +cgatcactgggatgcatacaaaggggagaggatcgtcctctgggatgattatggcatgagtaaccctgtggc +agatgctctccggctccaggaactcgccgacacctgccccttgacactcaactgtgacaggatagagaacaa +agggaaggtctttgacagtgacaccctgatcatcaccaccaatctggccaatccagctcctctcgactatgt +aaactttgaggcttg-ttcacgccgcatagacttccttgtctacgcggattccccctcagttgacaaagcaa +aaagagatttcccgggccaaccggacatgtggaaggacgccttcaagtcagatttctcacacataaagctac +aattagcaccacaaggaggatttgacaagaatggaaacacccctcatgggaagggcgtcatgaaaacactga +ccacacactccctcatagcacgcgccactggcttgcttcatgagaggttggatgaatttgacctgcaaggtc +cagagctaccagtgtacaattttgatcaaaacaaggtggccgcgttccgaaaactcgcagctgacaacaagt +atggtttcatggacaccttgagagcaggtaacaaattgaaggaagtcaaaaccctggaccagtttaaagaag +cagtgaaggacatacgcataaaaccctgcaggataatttacaactcactagcctatgatttggattcaaatg +ggtcaggaaaggtcaatgtcaaaaaggtgggggaccaacgaatccaggccaacaatgagctcaactctgcac +tcaacaaactgcgcggggccagaatcagatactatgtgaaatgtttccaagaaatgatctactcacttctcc +aaattgctggtgcggccttcgtcacgtctagaatggcgcagaggatga------atgtcaacaaactgtggg +ccaagccaga------------aaaaca--------gtcagagaccctcacggaaccacctacccctcca-- +--------attgaag---attggaccataacaccagcagacacagtccaagagggtaagaaaggtaaaaaca +agagtggcaggggcaagaagcacactgcgttctccagcaagggcctcagtgatgaggagtatgatgaataca +aaaggatcagggaagaacgtcaaggaaagtactctatagaggaatacctccaagacagggaccggtac---t +atgaagaattggctatagccaaagcaacagaagagaatttctgtgaagaggaagaaatcaaaatcaggcaga +ggatcttccgcccaaccaggaagcaacgtaaggaggagagggccaccctaggtcttgttacaggtagtgaga +taaggaagaggaaccccgatgacttcaagccaaaaggcaagctgtgggccgatgatgaccgcagtgtcaact +acaatgagagaatagactttgaagccccccctagtctttggtccaggatagtcaacttcggttcaggatggg +gtttttgggtctcct-ctaacctgttcatcacttccacacatgtcatcccacaaaacatgtctgaagccttt +ggagtgccaataaatcagatacaaatacacaggagtggggaattctgcaaaatgagattcccgaaagccatc +agacccgacgtttctggcatgatccttgaggagggtgcccctgaagggacagttgtgaccatattgatcaaa +agaacaactggtgaactcatgccattagcagcccgcatgggcacccacgccaccatgaagatacaaggtaga +atgattggaggccagatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtccct +ggtgactgtggctgtccctatgtctacaagaggggcaatgactgggtcgtcattggggtacacaccgccgcc +gctagaggcggcaacacagtgatctgtgccacccaggggccagatggtgaagccaccctcgagggaggtgac +aaccatgggacgtactgtggtgcacccatactagggcctggaaacgccccaaaactcagtaccaagaccaaa +ttttggagatcatccaacaccccacttccccctggcacatacgaacctgcctacctcggaggtaaagaccca +agggtcaaaggtggcccgtcactacaacaagtcatgagggaacagcttaagcccttcacagccccaagagga +aaaccgccaagaccagcgatcttggaggccgcaaaggaaaccatctgtaatgtactagaacagaccattgaa +ccaccccaaaagtggtcctacgcgcaagcctgcgcgtccctagacaagacaacttcaagcggacacccacac +cataaaaagaaaaatgacaattggaatggtgaatctttcactggtgttctggctgatcaggcgtcaaaggcc +aacctcatgtttgagcagggaaaacacatgcaacctgtgtacacaggagccctcaaagatgaacttgtcaaa +accagcaaaatctatgagaacattaagaagaggcttttatggggatcagacttgggcacgatgatacgctgt +gctagatcatttggtggtctcatggacgagatgaaggcaaactgtgtgaggttaccagtcagggttggtatg +aacatgaatgaggatgggcccataatctttgagaaacattcaaaatacagataccattatgatgctgactat +t-ctaggtgggactcaacacaacagagatatgtcttaggtgctgcccttgaaataatgg-ttaggttctcag +ccgagccagaatt-ggcacaaattgtggctgaagatctcttgtcgcccagcgtcatggacgtcggtgacttc +aaaattactataaatgaaggcttgccctctggggtcccatgcacgtcccagtggaattcaattgctcattgg +ttgttgacattatgtgccatggcagaggtctcaggattgtcaccagatgtgatacagtcaaattcctgcttc +tccttttacggagacgatgagatagtcagcacagatatcaaattggaccctcaaaaattaacagacaagcta +aaagagtacggcttgatcccaaccagacctgacaagacagaaggccctctgataatcaaagaaagtttggag +ggtttaacctttctgagaagagatgtgtgtagagatccagttgggtggtttggtaaacttgatcagtcttca +atcatgagacaactgtattggactaaaggacccaatcatgaagaccctagtgaaacaatgataccacattcc +cagaggcctgtgcagctgatgtccctactaggtgaagcagccctacatggaccagctttctacaaaaaggtc +agcaaattggttatcactgaactcaaagaaggtggaatggatttctatgtgcccaggcaagagcctatgttt +agatggatgaggttctccgatctgagcacgtgggagggtgatcgcaatctagctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccaacctcgtaccagaggccaacaaaga +ggttatggcattggaaccagtggcgggcggggcaatcgccgcacccctcactggtcaaacaaatataattga +cccctggatcatgaataattttgtgcaagcaccaaatggtgaatttacaatatctcccagaaattccccagg +agaagtgttgttaaatctagagttaggaccagacctcaaccctttccttgcccatttgtctagaatgtataa +tggatatgcggggggagtggaggtgcaagtgattatggctggcaacgctttcaccgc---gggaaaagtcat +cttcgcagctgtaccaccgcacttcccagttgacaacctcagcccccctcaggtgactatgtttccacatgt +tatagttgatgttaggacctttgagccaatcctacttccccttccagatgtgagaaatagcttctatcatta +taatcaggtgaatgat---tcaaggatgaggttgattgctatgctgtataccccactgagatcaaatggttc +ttccgatgatgttttcactgtatcctgtagagttttgactaggcccaccccagattttgagttcaactacct +ggtcccacctactgtcgaatcaagaacaaaacccttcagtgtgcccatcctaactattggagaaatgacaaa +ttcaagg---tttccactgcccatagacatgctgtacaccagcccaactgaaaacatagtagttcagcccca +aaatggtaggtgcacgttggaaggagaactactgggcacaacccagttagtgaccccgaacatctgcgcgct +acgtg-----------------------------------------gggagatcaggg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----gtggtgaca----------------------------------accacaaa----------------- +----------tggcattttatggtgaggagccccaatggggcagcttttgacccaactgaggatgtgcccgc +ccccctaggcacccctgatttcataggtgatgtgtttggagtcctctcacaaa---gaaacagaaa---cac +tgacagt-----ggtcagtctggtcctgcaaac--------aga-----------tcacatgatgctgttgt +ttccacaagggacagcagattcactccaaaactaggatctgtgatgatagcca---------cctgggagac +cagtgacat---cca---agaccagcccacca---------------------------gattcactccag- +--------taggc------cttgaaaaccctg------------atcattacaaccaatggcaattaccaaa +ttattcaggggca-ttaact------ctaaacatggggctggccccatctgtgtttccaacctaccccggag +agcaaatcctcttcttccgctcgtacatcccac------ttaagggcggata------tggag--------- +--attcccacattgattgcctggtaccacaggaatggatccaacatttctaccaagaatcagccccctcaca +aactgatgtggcattaatcaggtatgtgaaccccgaaacaggacgtgtcctgttcgaggccaagttgcatag +gcaaggttacataacagttgcaaggagtggcagcagtcccatcaatgtcccggccaatggctatttcagatt +cgactcctgggtcaaccaattctactcactcgcccccatgggaactggaaacgggcgcaga---------ag +gatcc---------aataatggcaggagctttcttagcaggattggcaggcgatatcgccactaacaccatg +gggtctttggtcagtgcagg---ggctaatgcaatcaatcagaaagttgattttgagaataataaattt--- +------------------------------cttcaaggtgaatcttttaagcatgataaggaaatgttgaat +gcacaggttgaagccacaaagaaactccagatggacatgattaacatcaaacaaggggtcttgactgctggg +ggattttcccccactgatgcagcccggggggccatcaacgcacccatgactaaggtgctggattggaatggg +acaaggtactgggcaccgaatgccaccaccacaacctcaatgtctggtggcttcactagt------------ +ca-----------ggtcgtgcacaggccaacaccaaat---------------------------------t +ttgggaa----------------caagcaagcccccaggcccgcg--------------------------- +-------------------------------------------------cct---------------agcat +tgcttcat-----------ctgag------------agatcaaattctacccaactcaccagt--------- +----------ctgagc-------tcccactc------ctctggatcttcgaggtccagtggatccaccgtgg +tcagctcac------tgc--------------------------------cct------------------c +ttcgag---------------------------------------taggactagggagtgggtagacagtca +aaatttcaatttggaaccccatttgc---ctgggtcgctgaagacagcctttgtcaccccaccatcaagtgt +tgcttca---agct------------------------------caggaa---cagtctcaactgtgcctaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tgtctag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495082.1/1-7139 |Norovirus GII strain Hu/BD/2012/GII.P22-GII.22/Dhaka1940 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------------------accgttgctacagtggacgtccc +ccccacacacaataccgcctacagtgtcccccccttggatcagagagagaaggttgaggcaaaggaaccact +aacaggctcaataattgagatgtgggatggtgagatctaccactatgggctctatgttgagaaaggcttggt +ccttggcgtgcacaaacctccagctgccgtgagcttcgcacgcatagagctcacccccctttctctatactg +gagaacagtctatacaccac---cctacctggttgctccagaaactctcagaaaactccacggggagtcatt +cccatacaacgcatttgacaacaattgctacaccttctgctgttgggtcttggacctgaatgattcttggct +caa---cagaaaatttgtatcaaggaccacgggtttctacaggccctaccaagagtggaacagaaagcctct +accaaccatggatgagggaaaacttaagaaagtggctaatgtgctcctatgcggcctatctgggcttttcac +tagaccaatcaaggacctcatagggaagctgagaccactaaacatactcaacatcatcaccaactgtgattg +gaccttccccggagttgtggaagctctcatattgcttgcagaactcttt---ggagttttctggacaccacc +agacatttccacctttatagcatcactcctgggcgattatgaaatgcagggccctgaggacattgcggttga +agttgtgccagtgatcttgggtggtataggtatggtgcttggattcaccaaggagaggatcggccggttgct +gagctccgccgcatcctcacttagggcatgcagggagatcggcaattatgggatagaagtagtgaagctagt +gatgaaatggtttttccccaccaaagatgaggcaaatgaaatggacatggtgagggcaatagaggatgctgt +gcttgactttgaagccatacagaacaaccacatgacagcattactcaaagacaaaaacagcctggctacttt +cctcagggagttggacatggaagaggagaaggcgcgtaagttatcaacaaagtctgcgtccccagacatcat +tggcaccataaacgcccttctagccaggattgccgccgctagatccctagtccacaaggccaaagaggaaat +gtcatctaggatgcgtcctgttgtcatcatgatctctggccggcccgggataggaaagacgcacctggcccg +tgacttggccaagaagatggcggcaaccctctcaggtgatcagagggtgggcctcgtaccgaggaatggtgt +tgatcattgggatgcatataaaggtgagagaattgtgctttgggatgattatggaatgagcaaccctgtgac +cgacgcgctgcggctccaagaacttgccgacacatgtcccttaacactcaactgtgatagaatagaaaacaa +ggggaaagtgtttgacagtgataccataattattaccactaatttggccaatcctgcccctctagattatgt +taattttgaagcctg-ctctcgccggatcgacttccttgtctatgcagactctccttcggtggacaaggcga +agagagacttccccggtcaaccagacatgtggaaggacgcctttaaaccagatttctcacacataaaactcc +aactggcaccacaagggggatttgacaagaacgggaacaccccccatgggaagggtgtcatgaaaacactga +ccacacattcccttatcgcccgtgctacgggtctactgcatgagaggttagatgagttcgacttgcagggac +ccgagttgcccgtgtacaactttgatcaaaacagagtcgctgctttcagaaaacttgcagctgacaataagt +acgggctcatggagaccataaaagtgggcaacaaactgaaaggtgtcaagactctagaacaactcaaggacg +ccttaaaagacataagtatcaagccttgcagaatagtctacaattcgatggcttatgaccttgactcgaacg +ggtcagggagagtcaacgtcaagaaggttgtagaccataagatccagactaacaatgagctcaactccgcgc +tcaacaacctgcgtggcgctagggtgagatactatgtcaaatgtgttcaagagatggtgtactcacttctcc +agatcgctggcgcagccttcgtcacttcaagaatgacacggaggctaa------acgtcagtggtatttggg +ccaggccaga------------gaaaca--------ggtggaggccattgaagaacccccaaccccccca-- +--------actgaag---attggactatagccccagcaaatacagtccaggagggtaaaaagggcaagaaca +aaagtggcagaggtaagaaacacactgccttctccagcaaaggtctaagtgatgaggaatatgatgagttta +aaaggatcagggaagaaaggcaaggaaaatactccatagaagagtacctccaggacagggatcggtac---t +atgaggaactagccatagccaaagcaacagaagaaaacttctgtgaggaggaagaaataaaaatcagacaga +gagtcttccgcccaaccagaaaacagcgcagggaggaaagggcaaccctagggctggtcacaggcagtgaaa +ttaggaagaggaacccagacgacttcaaaccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaagcccctcctagcctctggtcccgaatagtgaacttcggatcgggttggg +gtttctgggtgtctt-ctaatctgctgatcacatcaacacatgtcatccctccgaacatggctgaggctttt +ggcgtgccaataaatcagatacaaatacacagaagtggagaattctgtaaaatgaggttccccaaggctata +agacctgatgtttcaggcatgatcctcgaggaaggggctcctgaaggaacagtggtgaccatactgatcaaa +agaaccactggtgaactcatgccactggccgcccgaatgggcacccatgccaccatgaaaatacaaggaaaa +atgcttggaggccaaatgggcatgctcctcactggttccaatgccaaaaacatggatctcggcaccatccct +ggagactgtggttgtccttatgtgtacaagaggggtaatgattgggtggtcataggagtacacaccgcagct +gccagaggtggcaacaccgtgatctgtgccacccaggggccagatggtgaggccaccctcgagggaggagac +aaccatgggacctactgtggtgcaccaatacttggaccaggaagtgcaccaaaactcagcaccaaaaccaag +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctgggaggaaaggaccca +aggatcaaggggggcccgtcattacagcaggttatgagggatcaactcaaacctttcaccgctccccgaggg +aaaccaccacgaccagcgatcctagaggctgctaaagaaaccatttgcaatgtgcttgagcagaccattgaa +ccaccccaaaaatggtcctacgctcaagcctgcgcctcgttggataagacaacatcgagtggttatccccat +cacatgaggaagaatgacaactggaatggggaatccttcactggtgtactggctgaccaggcctctaaagca +aacctcatgtttgaacaaggaaaacacatgcaacctgtgtacactgctgcccttaaagatgagctggtcaag +accagcaagatatatgaaaacatcaagaaaaggctcctatggggttcagacctgggcacgatggtccgttgc +gctagggcttttggcggcctcatggatgaaatgaaagcaaattgtgtgaacttaccaattagggttggcatg +aacatgaatgaagatggacccatcatttttgagaaacattcaaaatataaataccactatgatgctgactac +t-ctaggtgggattcgacccagcagagacacatcctaggagctgcccttgaaataatgg-ttagattctcag +ctgagcccgaatt-agcacaaatagtgtctgaggacctcttggcccccagcgtggtggacgttggtgatttc +aaaattgtcataaatgagggcttgccctctggggtgccatgcacatcacaatggaactcaatttctcactgg +ctgataacattgtgcgccatatcagaagtttctgggctatcgccagatgtggtgcaaacaaattcctgtttt +tctttttatggggatgatgagatagtcagtaccgacatcaagttggatcccatggagctaactaataagcta +aaagagtatgggctgatcccaacaaggccagataaaacagagggacctctcatagtcaaagagagcctggag +ggcttgaccttcctcaggagggatgtgtgccgggacccagctggttggtatggaaaacttgaccaatcatca +attatgagacagttgttctggactaaaggacccaaccacgaagatcccaatgagacaatgatcccacactcc +caaagacccatacaactaatgtcattgttgggagaggcagcattgcatgggccaactttttataagaaagtc +agcaaactggtcattactgagctcaaagagggtgggatggatttctatgtgccaaggcaggaacctatgttc +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggcgctgccggcctcgtaccagagatcaacacaga +ggttatggcacttgaaccagttgctgggggagcaatcgcagctcctctcactggacaaacaaatataattga +tccctggattagaaataattttgtgcaggccccaaatggtgaatttaccatatctcctagaaattccccagg +agaaattctattaaatatggaattaggacctgagttgaaccccttcttggctcatctttccagaatgtataa +tggttttgcaggtggtatggaagtgcaggtgctgatggcggggaacgctttcaccgc---tgggaaagttat +cttcgctgcaatcccaccccatttcccagtggagaacctaagccccccacaaataactatgtttccccatat +aatcatagatgttaggaccctagaaccagtcttgttgcccatgcccgatgtgaggaatcaattctttcacta +caaccaggtgaacgag---cccaggatgcgcttagtggccatgctctatacacccctgaggtcaaatggatc +caccgaagacgttttcacagtgtcttgtagagtgttgaccaggccttcaccggattttgagttcaattatct +ggtacccccaactgtagagtcaagaacaaaaccctttaccttacctatccttacaattggagaaatgacaaa +ttcacgt---tttcccgcacccatagatatgctttataccagtcccaatgataatgtggttgtacaaccaca +gaatggcaggtgcactcttgatggtgagcttcaaggatccacacagctagtcccagcaaatgtgtgtgcgtt +taaag-----------------------------------------gcaaaatcacag-------------- +------------caaggattgt--------------------------------------------tg---- +----accagg------------cagca----------------------caccaa----------------- +----------tggcatatgcaaattgacaaccccaatggaacactgtttgacccaactgaggatgtgcctgc +acctctcggaacccctgatttcaaagctaaaatatttggtgttatatctcaaa---ggaatgatta---caa +tgatggt-----agtcaagg---gcctgcaaac--------agg-----------gcgcatgatgccgtggt +acctaccacatcagccaaattcaccccaaaattgggttccatattggtgggaa---------cttgggagaa +caacgacat---aga---aactcagccctcca---------------------------aattcactccag- +--------tcggt------ctgcttgagatga------------atgattttaatcagtggtcactaccaaa +ttattcaggggcc-ctaact------ctcaacatgggtcttgcaccagcggtcttcccaactttccctggtg +aacaaatccttttctttaggtcttttatcccgc------ttaaaggcggcca------cggca--------- +--atccagccattgactgcctcctcccgcaagagtggatacagcacttctatcaagagtctgccccttccca +aaccagtgttgctttgattaggtatgtaaaccctgatacaggacgagtcctgtttgagggaaaactgcatag +gcagggatttataaccattgcaaagtcaggagatggaccaattgttgtgcccccaaatggatatttcaggtt +tgattcttgggtaaaccagttttactcacttgcccccatgggaaatggaaacgggcgtaga---------ag +gattc---------agtaatggcaggagcatttatagcaggattggcaggggacattgtcacaaatggattg +gggtcattagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------cttcaatcagcatcatttgctcatgataaggagatgcttaaa +gcacaaattgaggccactaaacaacttcagtctgatatgattgccatcaagcaaagtgtgttatccgctggc +ggatttgcacctgcggacgcggcaaggggatcagtcaatgcgcccatgacaaaggtccttgactggggcggc +actaggtactgggcaccaaattcgacctccacgaccatgtattctggcggtttcacagga------------ +ca-----------accagtgcataggccaacaccaaat---------------------------------t +tctcagt----------------gaagag------caagcccgcg--------------------------- +-------------------------------------------------cca---------------agtgc +tgtaccat-----------catcct---------ataagtccaattccacagtgtcaactcaa--------- +----------ctgagc-------tctgtgtc------ttctggctcgtccagatccagcgcctccactgcaa +ctagctcaa------ttc--------------------------------cat------------------c +cacaac---------------------------------------aagaacaatggagtgggtcaggcagca +gaacagagagctggaaccacacatgc---ccggatcgctgaggacggcttttgtcacaccgccacccagcac +ggcatct---agct------------------------------cgggta---cagtctcaaccgtgcccaa +gggtgttttgga-ctcctggacgcctatgt------------ttaacacacataggcagccgcttttcgc-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495083.1/1-7200 |Norovirus GII strain Hu/BD/2012/GII.P22-GII.25/Dhaka1928 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------------------------------------------------tggggacataatcatcaaa +tacaccaaac----------aaga---tgatgtggttgtaggggtgcccactgtcgctacggtggatgtccc +cccaacacacaacaccgcctacagtgtcccccccttggaccagagggagaaggttgaggcaaaggaacctct +gacaggctcgataattgagatgtgggatggtgaaatttatcactatgggctctatgttgagaggggcttggt +tcttggagtgcacaaacccccagctgccataagcttcgcgcgcatagaactcacccccctctctttatactg +gagaacagtctacacaccac---cttacctagtagccccagaaacccttagaagactccacggagagtcgtt +cccatacaatgcatttgacaacaattgctactccttctgttgttgggtcttggacttgaatgattcctggct +taa---cagaaagtttgtttcgaggaccacaggtttctacagaccctaccaagagtggaacagaaagcctct +accaaccatggatgaggggaaactcaagaaagtggccaatgtgctactgtgcggtctctctggtcttttcac +tagaccaatcaaggacctcatagggaaactaagaccattaaacattctcaacatcatcaccaattgtgattg +gactttccccggagttgtggaagctctcatattacttgcagaactcttc---ggagtcttctggacaccacc +agacatttccacttttatagcatcacttttgggtgattatgaaatgcagggccctgaggacatcgcagttga +agttgtgccagtaattctcggtggcataggcatggtactcgggttcaccaaagagagaatcggccggttgct +gagctctgccgcttcttcacttagggcgtgcagagagatcggtaattacggaatagaagtggtgaagttggt +gatgaaatggtttttccccaccaaagatgaggcaaacgagatggacatggtgagggcaatagaggatgccgt +gctcgactttgaggccatacaaaataatcacatgacagcattactcaaagacaaaaacagcctggcaacctt +ccttagggagttggacatggaagaggagaaagcgcggaagttatcaacaaagtccgcgtccccagacatcat +tggcaccataaacgcccttctagccaggattgccgccgccaggtccctagtccacaaggccaaagaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctctggccgacccgggataggaaagacacatctggcccg +cgacctggccaagaagatggcggcgaccctctcaggtgaccagagggtaggactcgtgccgaggaacggtgt +tgatcactgggatgcatacaaaggggagagaattgtgctctgggatgactatggaatgagcaatcctgtgac +cgacgcgttgcggctccaagaacttgccgacacgtgtcccttgacgctcaactgtgataggatagaaaacaa +ggggaaagtgtttgacagtgacaccataattatcaccaccaatttggccaatcctgcccctctagattatgt +taattttgaagcttg-ctctcgtcgaatcgatttccttgtctatgcagactccccctcggtggacaaggcga +agagggacttccccggccaaccagacatgtggaaggatgcctttaaaccagatttctcccacataaaacttc +aactggcaccacaagggggctttgataagaacggaaataccccccatgggaagggtgtcatgaaaacactga +ccacacattcccttattgcccgcgccacgggtctgttgcatgagaggttggatgagttcgacctacagggac +ctgaactgcctgtgtacaattttgaccaaaacagggtgaccgctttcagaaagcttgcagctgataacaagt +acgggctcatggagaccataaaagtgggcaacaaactgaaaggtgtcaagactctggaacaactcaaggatg +ccttaagagacataagcatcaagccttgcagaataatctacaactctatggcttatgatcttgactcgaacg +ggtcagggagggttaacgtcaaaaaggttgtagatcataaggtccaaactaacaatgaactcaactccgcgc +tcaacaacctgcgcggcgctagggtaagatactatgtcaagtgtgttcaagagatggtgtactctctcctcc +agatcgctggcgcggccttcgtcacttcaaggatgacgcgaaggttaa------acgtcagtggtatctggg +ccaggccaga------------aaaaca--------ggtggaggccgttgaagaacccccagccccccca-- +--------cctgaag---attggactataaccccatcagatgcaattcaagaaggtaaaaagggcaagaaca +aaagtggcaggggtaagaaacacactgccttctccagcaaaggcctgagtgatgaggagtatgatgagttta +aaaggatcagggaagagaggcaaggaaaatactccatagaagaatacctccaagacagagaccggtac---t +atgaggaattggccatagccaaagcaacagaagagaatttctgtgaggaggaagaaataaaaattagacaga +gggtctttcgcccaaccagaaaacagcgcagggaggaaagggcaaccctgggattggtcacgggtagtgaaa +tcaggaaaaggaacccagacgacttcaaaccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagattttgaggcccctcctagcctttggtcccgaatagtgaactttgggtcaggctggg +gtttctgggtgtctt-ctaacctgttaatcacatcaacacacgtcatccccccgaacatgactgaggctttt +ggtgtaccaataagccagatacaaatacacagaagtggagagttctgcaaaatgaggtttcccaaggctata +agacctgatgtctcgggcatgatcctagaggaaggagcccctgaagggacggtggtgaccatactgattaag +agaaccactggtgagctcatgccgttggccgctcgaatgggcacccacgccaccatgaagatacaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggcaccatccct +ggggactgtggttgtccctatgtgtacaagaggggtaatgattgggtggtcataggtgtgcacaccgcagct +gccagaggtggcaacaccgtaatctgcgccacccaggggccagatggtgaggccacactcgagggaggggac +aaccacgggacctactgtggtgcaccaatacttggaccaggaaatgcaccaaaactcagcaccaaaaccaag +ttctggaggtcatccaatgccccactcccgcctggcacttatgagcctgcctacctaggaggaaaagatcca +agggtcaaggggggtccgtcattacaacaggttatgagggatcagctcaaacctttcaccgccccccgaggg +aaaccaccgcggccagcaaccttagaggctgccaaagagaccatttgcaatgtgcttgagcaggtcattgaa +ccaccccaaaaatggtcttacgctcaggcctgtgcctcattggataagacaacatctagtggtcacccccac +cacatgaaaaagaatgacaattggaacggagagtcttttactggtgcactagctgatcaggcctctaaggca +aaccttatgtttgaacaaggaaaacacatgcaacccgtgtatactgctgctctcaaagatgaactcgttaag +actagtaagatctatgaaaacattaagaaaagacttctatggggatcagatctgggcacgatgatccgttgt +gctagggcatttggtggcctcatggatgagatgaaggcaaattgtgtgaatttaccaattagagttggcatg +aacatgaatgaagatgggcccatcatatttgagaaacattcaaaatataagtatcactatgatgccgactat +t-ccaggtgggactcaacccaacagagacacattcttggggctgcccttgaaataatgg-tcagattctcag +ctgaacctgaatt-ggcacaaatcgtgtctgaagatctcttagcccctagtgtggtggatgttggcgacttc +aaaattaccataaatgaaggattgccctctggagtgccgtgcacatcacaatggaattcaatttcccactgg +ctcataacactatgtgccatatcagaagtttcagggctgtcgccagacgtggtacagacaaactcctgcttc +tccttctacggggatgatgagatagtcagcactgatatcaagttggaccccttgaagctgaccaacaagtta +aaagagtatggactgattccaacaagaccagataagacagagggaccgctcataattaaagagagccttgag +ggtctaactttcctgaggagggacgtgtgtcgagacccagctggttggtacggaaagcttgatcaatcttca +attatgagacaactgtattggactaagggaaccaaccatgatgatcccaatgagacaatgatcccacactct +cagagacccatacaattaatgtcattgctgggggaggcggcactgcatggtccagctttttacaagaaagtc +agcaaactagtcatcactgagctcaaggagggtgggatggatttctatgtaccaagacaggaacctatgttc +agatggatgagattctcagacctcagtacttgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaacaatga +ggtcatggcattggaaccagtagctgggggagctatcgcagccccgctcactggacaaacaaatgtaattga +tccctggataagaactaattttgtacaagccccaaatggtgagttcaccatttctcccagaaattccccagg +agaagttttattgaacatggaattgggccctgagttaaaccccttcttaggacatttatctagaatgtataa +tggttatgctggtgggattgaagtccaagttttgatggcgggaaacgccttcacggc---aggtaaggtcat +ctttgcagctgttccacctcatttccctgttgaaaatttgagtcccccacaagtgactatgttccctcatat +aattgtagatgttaggaccttggaaccaatcctgttgccccttcccgatgtgagaaaccaattctttcacta +cagtcaggtggacgaa---cccaagatgcggttggtggccatgctctacacaccgttgagatctaacgggtc +tgcagaagatgtcttcacagtgtcttgcagagtgttgaccaggccatcaccagattttgaattcaattattt +ggtaccaccaactgtagaatcaagaaccaagccttttactgtacccatcctaaccattggggaaatgtcaaa +ttcacgc---ttccctgcccctatagatatgctctacacaagccccaatgataaccagaatgtgcagccaca +aaatggcagatgcaccctagatggggaactgcaaggcaccacccaactggtcccatcaggtgtatgtgcgtt +caggg-----------------------------------------gcagaatcacgggcc----------- +-----------acgagggatca--------------------------------------------ga---- +----gcaaa-----------------------------------------accag----------------- +----------tggcacatgcaactgaccaacctcaacgggacaccatttgacccaacggaagacatccccgc +accccttggcacccctgacttcaaaggagaaatatttggattcatatcacaaa---gaaatgcaca---aaa +tgaccca-----gggcaaagccaaccagccaac--------agg-----------gcacacgatgcggtggt +atctactagggcaccaaaattcactccaaaattggggtcggtgatgattggca---------catgggtgaa +ctctgacat---tga---gaaccaaccctcaa---------------------------aattcaccccag- +--------ttggg------ctaaatagcaatg------------aaaatttcagacagtgggaactaccaga +ttactcaggagtg-ctaacc------cttaacatgggattggcgcccgttgtccacccaacctaccccggtg +agcaaatcctattctttaggtcatatatcccac------taaaaggtggtca------tggca--------- +--accccgccatagactgtctcctcccccaggagtggatccagcacttctaccaggagtctgcgccctccca +gactgatgttgccttacttaggtatgtgaaccccgatacaggacgagtcctgttcgaggccaaattgcacag +acagggatacatcaccattgcaaaatcaggggatggaccaattgttgtgcccccaaatggatattttaggtt +tgattcttgggtgaaccagttctattctcttgcccccatgggaaacggaaatgggcgtaga---------ag +ggttc---------aataatggcaggagcattcatagcaggattggcaggtgacatagtcacaaatgggata +gggtctttggtcaatgcagg---ggctaattcaattaatcagaaagttgattttgaaaacaataagcaa--- +------------------------------cttcaatcagcttcttttgctcatgacaaagagatgctccag +gcacaagtggctgcgaccaagcagctccaatctgacatgattgccatcaagtacggtgtgctatccgctggc +gggttctcacccactgatgcagcaagaggcgcggtcaacgcacccatgacaaaagtcttggactggagtgga +accagatactgggcacctaatgcggccacaacgaccatgtactccggcgggttcattggt------------ +ca-----------gccggtgcataggccaacaccaaat---------------------------------t +ttacagt----------------gaagga------taaatctgca--------------------------- +-------------------------------------------------ccc---------------agttc +tgcttcat-----------ccacgt---------acaagtccaactccacagcaacgaccaga--------- +----------ctaaa----------------------ttccagctcttcagggtccagtgtctccacagcca +ccacctcac------tcc--------------------------------cat------------------c +caccac---------------------------------------caggacggccgagtgggtgagacaaca +aaacaggtcactggaaccccacctac---ctggttcgctgaggacagcttttgtcactccaccatcaagttc +agcttct---agta------------------------------caggca---cagtctcaaccgtgcctaa +aggtgttttgga-ctcctggacgcctatgt------------tcaacacgcataggcagccgctctttgcat +acctctataagag----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495084.1/1-7249 |Norovirus GII strain Hu/US/2013/GII.P24-GII.24/EdenPrairie5457 nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------caaatgg------tgaggacatagtaatcaag +tataccaaac----------aaga---ggacacggtcagtggggtgcctagcgtttccaccgtagacatatc +ccctccacatgacactgcatacagtgtcccccccctggaccaaagggagaaggtggatgcaaaagaacccct +gactggttcaataatagagatgtgggatggtgagatctatcattatgggctctacgtagagaaggggctagt +tcttggcgtgcacaaacctccagctgccatgagcattgcgcgcatcgagctaacccctctctctctgtactg +gagaacagtatacacacccc---cttacctggttgcccctgacacccttaggaaacttcatggtgaaacctt +tccctatacagcatttgacaacaactgttactcattctgttgctgggttttggacctgaacgattcctggct +caa---cagaaagtttgtgtctcgaaccacgggcttctacagaccctaccaagattggaacagaaaaccaat +gccaaccatggacgagggaaaacttaagaaagtggccaatgtgtttctgtgcggcctgactgggctgttcac +caggcccatcaaagacatcataggtaagttgaaaccgctgaatctccttaacatcgttgccaattgcgactg +gaccttccctggtgttgtggaagcaataattctcctctcagaacttttt---ggcatcttttggacaccacc +agatatatctgctttcgttgcctccttactaggtgactacgaaatgcaaggccctgaagacatcgcaaccga +gatcgttccagtcatcctcggcggtattggcatggttctaggcttcaccaaagagaaaattggccgactgct +gagctctgcggcatcatcccttagagcatgcagagagatcggcaactacgggatagaggtggtaaaactggt +gatgaaatggttcttcccgaccaaaagtgaggttaatgagatggaaatggtcagaacaatagaggatgcagt +gcttgactttgaggcgatagagaacaaccacatgacagctttgctcaaagacaagaatagtctggccacctt +tctcagagcattagacatggaagaggaaaaggcgcggaaactgtcaaccaaatccgcctcacctgacatagt +cggcaccataaacgcactcttggcgaggatcgccgctgccagatccctagttcacagggccaaggaagagat +gtcatctaggatgcgtccagtcgtcatcatgatttctgggcgacctgggattgggaaaacacacctggcacg +cgacctggccaaaaagatggcggccaccttatcgggtgaccagagagtgggccttgtcccaagaaacggtgt +cgatcactgggatgcatacaaaggggagaggatcgtcctctgggatgattatggcatgagcaaccctgtggc +agatgctctccggctccaggaacttgccgacacctgccccttgacactcaactgtgacaggatagagaacaa +agggaaggtctttgacagtgacaccctgattatcaccaccaatctggccaatccagctcctctcgactatgt +aaactttgaggcctg-ttcacgccgcatagacttccttgtctacgcagattccccctcagttgacaaagcaa +aaagagacttcccaggccaaccggacatgtggaaggacgccttcaagccagatttctcacacataaagctac +aattagcaccacaaggaggatttgacaagaatggaaacaccccccatgggaagggcgtcatgaaaacactga +ctacacactccctcatagcacgcgccactggcttgcttcatgagaggttggatgaatttgacctgcaaggtc +cagagttaccagtgtacaattttgatcaaaacaaggtggccgcgttccgaaaactcgcagctgacaacaagt +atggtttcatggacaccttgagagcaggtaacaaactgaaggaagtcaaaaccctggaccagtttaaagaag +cagtgaaggacatacgcataaaaccatgcaggataatctacaactcactagcctatgatttggactcaaatg +ggtcaggaaaggtcaatgtcaaaaaggtgggggaccaacggatccaggccaacaatgagctcaactctgcac +tcaataaactgcgcggggccagaatcagatactatgtgaaatgtttccaagaaatgatctactcacttctcc +aaattgctggtgcggccttcgtcacgtctagaatggcgcagaggatga------atgtcaacaaactgtggg +ccaagccaga------------aaaaca--------gtcagagaccctcacggaaccacctacccctcca-- +--------attgaag---attggaccataacaccagcagacacagtccaagagggtaagaaaggtaaaaaca +agagtggcagaggcaagaagcacactgcgttctccagcaagggtctcagtgatgaggagtatgatgaataca +aaaggatcagggaagaacgtcaaggaaagtactctatagaggaatacctccaagacagggaccggtac---t +atgaagaattggctatagccaaagcaacagaagagaatttctgtgaagaggaagaaatcaaaattaggcaga +ggatcttccgcccaaccaggaagcaacgtaaggaggagagggccaccctaggtcttgttacaggtagtgaga +taaggaagaggaaccccgatgacttcaagccaaaaggtaagctgtgggccgatgatgaccgcagtgtcaact +acaatgaaagaatagactttgaagccccccctagtctttggtccaggatagtcaacttcgggtcaggatggg +gtttttgggtttcct-ctaacctgttcatcacttccacacatgtcatcccacaaaacatgtctgaagccttt +ggagtgccaataaatcagatacaaatacacaggagtggggaattctgcaaaatgagattcccgaaagccatc +agacccgacgtttctggcatgatccttgaggagggtgcccctgaagggacagttgtgaccatattgatcaaa +agaacaactggtgaactcatgccattagcatcccgcatgggcacccatgccaccatgaagatacaaggtaga +atgattggaggccagatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtccct +ggtgactgtggctgtccctatgtctacaagaggggcaatgactgggtcgtcattggggtgcacactgccgcc +gctagaggcggcaacacagtgatctgtgccacccaggggccagatggtgaagccaccctcgagggaggtgac +aaccatgggacgtactgtggtgcacccatactagggcctggaaacgccccaaaactcagtaccaagaccaaa +ttctggagatcatccaacaccccactcccccctggcacatacgaacctgcctacctcggaggtaaagaccca +agggtcaaaggaggcccgtcactacaacaagtcatgagggaacagcttaagcccttcacagccccaagagga +aaaccgccaagaccagcgatcttggaggccgcaaaggaaaccatctgtaatgtactagaacagaccattgaa +ccaccccaaaagtggtcctacgcgcaagcctgcgcgtccctagacaagacaacttcaagcggacacccacac +cataaaaagaaaaatgacaattggaatggtgaatctttcactggtgttctggctgatcaggcgtcaaaggcc +aacctcatgtttgagcagggaaaacacatgcaacctgtgtacacaggagccctcaaagatgaacttgtcaaa +accagtaaaatctatgagaacattaagaagaggcttttatggggatcagacttgggcacgatgatacgctgt +gctagagcatttggtggtctcatggaggagatgaaggcaaactgtgtgaggttaccagtcagggttggtatg +aacatgaatgaggatgggcccataatctttgagaaacattcaaaatacagataccattatgatgctgactat +t-ctaggtgggactcaacacaacagagatatgtcttaggtgctgcccttgaaataatgg-ttaggttctcag +ccgagccagaatt-ggcacaaattgtggctgaagatctcttgtcgcccagcgtcatggacgtcggtgacttc +aagattactataaatgaaggcttgccctccggggtcccatgcacgtcccagtggaattcaattgcccattgg +ttgttgacattatgtgccatggcagaggtctcaggattgtcaccagatgtgatacagtcaaattcctgcttc +tccttttacggagacgatgagatagttagcacagatatcaaattggactctcaaaagttgacagacaagcta +aaagagtacggcttgatcccaaccagacctgacaagacagagggccccctaataatcaaagaaagtttggag +ggtttaacctttctgagaagggatgtgtgtagagatccagttgggtggtttggtaagcttgatcagtcttca +atcatgagacaactgtattggaccaaaggacccaatcatgaagaccctaatgaaacaatgataccacattct +caaaggcctgtgcagctgatgtccctacttggtgaagcagccctacatggaccagctttctacaaaaaggtc +agcaaattggttatcactgaactcaaagaaggtggaatggatttctatgtgcccaggcaagagcctatgttt +agatggatgaggttctccgatctgagcacgtgggagggtgatcgcaatctagctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccaacctcgtaccagaggccaacaaaga +ggttatggcattggaaccagtggcaggcggggcaatcgccgcacccctcactggtcaaacaaatataattga +cccctggatcatgaataattttgtgcaagcaccaaatggtgaatttacaatatctcccagaaattccccagg +agaggtgttgttgaacctagagttgggaccagacctcaaccctttccttgcccatttgtctagaatgtataa +tggatatgcggggggagtggaggtgcaagtgattatggctggcaacgctttcaccgc---gggaaaagtcat +cttcgcagctgtaccaccgcacttcccagttgacaacctcagcccccctcaggtgactatgtttccacatgt +tatagttgatgttaggactcttgagccaatcctacttccccttccagatgtgagaaataacttctatcatta +taatcaggtgaatgat---tcaaggatgaggttgattgctatgttgtataccccattgagatcaaatggttc +ttctgatgatgttttcactgtatcatgtagagttttgactaggcccaccccagactttgagttcaactacct +ggtcccacctactgttgaatcaagaacaaaacccttcagtgtgcccatcctaactattggagaaatgacaaa +ttcaagg---ttcccactgcccatagacatgctgtacaccagcccaactgaaaacatagtagttcagcccca +aaatggtaggtgcacgttggaaggagaactactgggtacaacccagttagtgaccccgaacatctgcgcgct +acgtg-----------------------------------------gggagatcaggg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----gtggtgaca----------------------------------accacaaa----------------- +----------tggcattttatggtgaggagccccaatggggcagcttttgacccaactgaggatgtacccgc +ccccctaggcacccctgatttcataggtgatgtgtttggagtcctctcacaaa---gaaacagaaa---cac +tgacagt-----ggtcagtctggtcctgcaaac--------aga-----------tcacatgatgctgttgt +ttccacaagggacaacagattcactccaaaactaggatctgtgatgatagcca---------cctgggagac +cgatgacat---cca---agaccagcccacca---------------------------gattcactccag- +--------taggc------cttgaaaaccctg------------atcattacaaccaatggcaattaccaaa +ttattcaggggca-ctaact------ctaaacatggggctggccccatctgtgtttccaacctaccccggag +aacaaatcctcttcttccgctcgtacatcccac------tcaagggcggata------tggag--------- +--attcccacattgattgcctggtaccacaggaatggatccaacatttctaccaagaatcagccccctcaca +aactgatgtggcattaatcaggtatgtgaaccccgaaacaggacgtgtcctgttcgaggccaaattgcatag +gcaaggctacataacagttgcaaggagtggcagcagccccatcaatgtcccggccaatggctattttagatt +cgactcctgggtcaaccaattctattcactcgcccccatgggaactggaaacgggcgcaga---------ag +aatcc---------aataatggcaggagctttcttagcaggattggcaggcgatatcgccactaacaccatg +gggtctttggtcaatgcagg---ggctaatgcaatcaatcagaaagttgattttgagaataataaattt--- +------------------------------ctccaaggtgaatcttttaagcatgataaggaaatgttgaat +gcacaggttgaagccacaaagaaactccagatggacatgattaacatcaaacagggggtcttgactgctggg +ggattttcccccactgatgcagcccggggggccatcaacgcacccatgactaaggtgctggattggaatggg +acaaggtactgggcaccgaatgccaccaccacaacctcaatgtctggtggcttcactagt------------ +ca-----------ggtcgtgcacaggccaacaccaaat---------------------------------t +ttggaaa----------------caagcaagcccccaggcctgcg--------------------------- +-------------------------------------------------cct---------------agcag +tgcttcat-----------ctgtg------------agatcaaattctacccaactcaccagt--------- +----------ctgggc-------tcccactc------ctctggatcttcgaggtccagtggatccaccgtgg +tcagctcac------tgc--------------------------------cct------------------c +ttcgag---------------------------------------taggactagggagtgggtaaacagtca +aaatctcaatttggaaccccatttgc---ctgggtcgctgaagacagcctttgtcaccccaccatcaagtgc +tgcttca---agct------------------------------caggaa---cagtctcaactgtgcctaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tgtctag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG495085.1/1-7204 |Norovirus GII strain Hu/US/2013/GII.P24-GII.24/EdenPrairie5458 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------gg------tgaggacatagtaatcaag +tataccaaac----------aaga---ggacacggtcagtggggtgcctagcgtttccaccgtagacatatc +ccctccacatgacactgcatacagtgtcccccccctggaccaaagggagaaggtggatgcaaaagaacccct +gactggttcaataatagagatgtgggatggtgagatctatcattatgggctctacgtagagaaggggctagt +tcttggcgtgcacaaacctccagctgccatgagcattgcgcgcatcgagctaacccctctctctctgtactg +gagaacagtatacacacccc---cttacctggttgcccctgacacccttaggaaacttcatggtgaaacctt +tccctatacagcatttgacaacaactgttactcattctgttgctgggttttggacctgaacgattcctggct +caa---cagaaagtttgtgtctcgaaccacgggcttctacagaccctaccaagattggaacagaaaaccaat +gccaaccatggacgagggaaaacttaagaaagtggccaatgtgtttctgtgcggcctgactgggctgttcac +caggcccatcaaagacatcataggtaagttgaaaccgctgaatctccttaacatcgttgccaattgcgactg +gaccttccctggtgttgtggaagcaataattctcctctcagaacttttt---ggcatcttttggacaccacc +agatatatctgctttcgttgcctccttactaggtgactacgaaatgcaaggccctgaagacatcgcaaccga +gatcgttccagtcatcctcggcggtattggcatggttctaggcttcaccaaagagaaaattggccgactgct +gagctctgcggcatcatcccttagagcatgcagagagatcggcaactacgggatagaggtggtaaaactggt +gatgaaatggttcttcccgaccaaaagtgaggttaatgagatggaaatggtcagaacaatagaggatgcagt +gcttgactttgaggcgatagagaacaaccacatgacagctttgctcaaagacaagaatagtctggccacctt +tctcagagcattagacatggaagaggaaaaggcgcggaaactgtcaaccaaatccgcctcacctgacatagt +cggcaccataaacgcactcttggcgaggatcgccgctgccagatccctagttcacagggccaaggaagagat +gtcatctaggatgcgtccagtcgtcatcatgatttctgggcgacctgggattgggaaaacacacctggcacg +cgacctggccaaaaagatggcggccaccttatcgggtgaccagagagtgggccttgtcccaagaaacggtgt +cgatcactgggatgcatacaaaggggagaggatcgtcctctgggatgattatggcatgagcaaccctgtggc +agatgctctccggctccaggaacttgccgacacctgccccttgacactcaactgtgacaggatagagaacaa +agggaaggtctttgacagtgacaccctgattatcaccaccaatctggccaatccagctcctctcgactatgt +aaactttgaggcctg-ttcacgccgcatagacttccttgtctacgcagattccccctcagttgacaaagcaa +aaagagacttcccaggccaaccggacatgtggaaggacgccttcaagccagatttctcacacataaagctac +aattagcaccacaaggaggatttgacaagaatggaaacaccccccatgggaagggcgtcatgaaaacactga +ctacacactccctcatagcacgcgccactggcttgcttcatgagaggttggatgaatttgacctgcaaggtc +cagagttaccagtgtacaattttgatcaaaacaaggtggccgcgttccgaaaactcgcagctgacaacaagt +atggtttcatggacaccttgagagcaggtaacaaactgaaggaagtcaaaaccctggaccagtttaaagaag +cagtgaaggacatacgcataaaaccatgcaggataatctacaactcactagcctatgatttggactcaaatg +ggtcaggaaaggtcaatgtcaaaaaggtgggggaccaacggatccaggccaacaatgagctcaactctgcac +tcaataaactgcgcggggccagaatcagatactatgtgaaatgtttccaagaaatgatctactcacttctcc +aaattgctggtgcggccttcgtcacgtctagaatggcgcagaggatga------atgtcaacaaactgtggg +ccaagccaga------------aaaaca--------gtcagagaccctcacggaaccacctacccctcca-- +--------attgaag---attggaccataacaccagcagacacagtccaagagggtaagaaaggtaaaaaca +agagtggcagaggcaagaagcacactgcgttctccagcaagggtctcagtgatgaggagtatgatgaataca +aaaggatcagggaagaacgtcaaggaaagtactctatagaggaatacctccaagacagggaccggtac---t +atgaagaattggctatagccaaagcaacagaagagaatttctgtgaagaggaagaaatcaaaattaggcaga +ggatcttccgcccaaccaggaagcaacgtaaggaggagagggccaccctaggtcttgttacaggtagtgaga +taaggaagaggaaccccgatgacttcaagccaaaaggtaagctgtgggccgatgatgaccgcagtgtcaact +acaatgaaagaatagactttgaagccccccctagtctttggtccaggatagtcaacttcgggtcaggatggg +gtttttgggtttcct-ctaacctgttcatcacttccacacatgtcatcccacaaaacatgtctgaagccttt +ggagtgccaataaatcagatacaaatacacaggagtggggaattctgcaaaatgagattcccgaaagccatc +agacccgacgtttctggcatgatccttgaggagggtgcccctgaagggacagttgtgaccatattgatcaaa +agaacaactggtgaactcatgccattagcatcccgcatgggcacccatgccaccatgaagatacaaggtaga +atgattggaggccagatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtccct +ggtgactgtggctgtccctatgtctacaagaggggcaatgactgggtcgtcattggggtgcacactgccgcc +gctagaggcggcaacacagtgatctgtgccacccaggggccagatggtgaagccaccctcgagggaggtgac +aaccatgggacgtactgtggtgcacccatactagggcctggaaacgccccaaaactcagtaccaagaccaaa +ttctggagatcatccaacaccccactcccccctggcacatacgaacctgcctacctcggaggtaaagaccca +agggtcaaaggaggcccgtcactacaacaagtcatgagggaacagcttaagcccttcacagccccaagagga +aaaccgccaagaccagcgatcttggaggccgcaaaggaaaccatctgtaatgtactagaacagaccattgaa +ccaccccaaaagtggtcctacgcgcaagcctgcgcgtccctagacaagacaacttcaagcggacacccacac +cataaaaagaaaaatgacaattggaatggtgaatctttcactggtgttctggctgatcaggcgtcaaaggcc +aacctcatgtttgagcagggaaaacacatgcaacctgtgtacacaggagccctcaaagatgaacttgtcaaa +accagtaaaatctatgagaacattaagaagaggcttttatggggatcagacttgggcacgatgatacgctgt +gctagagcatttggtggtctcatggaggagatgaaggcaaactgtgtgaggttaccagtcagggttggtatg +aacatgaatgaggatgggcccataatctttgagaaacattcaaaatacagataccattatgatgctgactat +t-ctaggtgggactcaacacaacagagatatgtcttaggtgctgcccttgaaataatgg-ttaggttctcag +ccgagccagaatt-ggcacaaattgtggctgaagatctcttgtcgcccagcgtcatggacgtcggtgacttc +aagattactataaatgaaggcttgccctccggggtcccatgcacgtcccagtggaattcaattgcccattgg +ttgttgacattatgtgccatggcagaggtctcaggattgtcaccagatgtgatacagtcaaattcctgcttc +tccttttacggagacgatgagatagttagcacagatatcaaattggactctcaaaagttgacagacaagcta +aaagagtacggcttgatcccaaccagacctgacaagacagagggccccctaataatcaaagaaagtttggag +ggtttaacctttctgagaagggatgtgtgtagagatccagttgggtggtttggtaagcttgatcagtcttca +atcatgagacaactgtattggaccaaaggacccaatcatgaagaccctaatgaaacaatgataccacattct +caaaggcctgtgcagctgatgtccctacttggtgaagcagccctacatggaccagctttctacaaaaaggtc +agcaaattggttatcactgaactcaaagaaggtggaatggatttctatgtgcccaggcaagagcctatgttt +agatggatgaggttctccgatctgagcacgtgggagggtgatcgcaatctagctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccaacctcgtaccagaggccaacaaaga +ggttatggcattggaaccagtggcaggcggggcaatcgccgcacccctcactggtcaaacaaatataattga +cccctggatcatgaataattttgtgcaagcaccaaatggtgaatttacaatatctcccagaaattccccagg +agaggtgttgttgaacctagagttgggaccagacctcaaccctttccttgcccatttgtctagaatgtataa +tggatatgcggggggagtggaggtgcaagtgattatggctggcaacgctttcaccgc---gggaaaagtcat +cttcgcagctgtaccaccgcacttcccagttgacaacctcagcccccctcaggtgactatgtttccacatgt +tatagttgatgttaggactcttgagccaatcctacttccccttccagatgtgagaaataacttctatcatta +taatcaggtgaatgat---tcaaggatgaggttgattgctatgttgtataccccattgagatcaaatggttc +ttctgatgatgttttcactgtatcatgtagagttttgactaggcccaccccagactttgagttcaactacct +ggtcccacctactgttgaatcaagaacaaaacccttcagtgtgcccatcctaactattggagaaatgacaaa +ttcaagg---ttcccactgcccatagacatgctgtacaccagcccaactgaaaacatagtagttcagcccca +aaatggtaggtgcacgttggaaggagaactactgggtacaacccagttagtgaccccgaacatctgcgcgct +acgtg-----------------------------------------gggagatcaggg-------------- +------------ggcatgaagg--------------------------------------------ca---- +----gtggtgaca----------------------------------accacaaa----------------- +----------tggcattttatggtgaggagccccaatggggcagcttttgacccaactgaggatgtacccgc +ccccctaggcacccctgatttcataggtgatgtgtttggagtcctctcacaaa---gaaacagaaa---cac +tgacagt-----ggtcagtctggtcctgcaaac--------aga-----------tcacatgatgctgttgt +ttccacaagggacaacagattcactccaaaactaggatctgtgatgatagcca---------cctgggagac +cgatgacat---cca---agaccagcccacca---------------------------gattcactccag- +--------taggc------cttgaaaaccctg------------atcattacaaccaatggcaattaccaaa +ttattcaggggca-ctaact------ctaaacatggggctggccccatctgtgtttccaacctaccccggag +aacaaatcctcttcttccgctcgtacatcccac------tcaagggcggata------tggag--------- +--attcccacattgattgcctggtaccacaggaatggatccaacatttctaccaagaatcagccccctcaca +aactgatgtggcattaatcaggtatgtgaaccccgaaacaggacgtgtcctgttcgaggccaaattgcatag +gcaaggctacataacagttgcaaggagtggcagcagccccatcaatgtcccggccaatggctattttagatt +cgactcctgggtcaaccaattctattcactcgcccccatgggaactggaaacgggcgcaga---------ag +aatcc---------aataatggcaggagctttcttagcaggattggcaggcgatatcgccactaacaccatg +gggtctttggtcaatgcagg---ggctaatgcaatcaatcagaaagttgattttgagaataataaattt--- +------------------------------ctccaaggtgaatcttttaagcatgataaggaaatgttgaat +gcacaggttgaagccacaaagaaactccagatggacatgattaacatcaaacagggggtcttgactgctggg +ggattttcccccactgatgcagcccggggggccatcaacgcacccatgactaaggtgctggattggaatggg +acaaggtactgggcaccgaatgccaccaccacaacctcaatgtctggtggcttcactagt------------ +ca-----------ggtcgtgcacaggccaacaccaaat---------------------------------t +ttggaaa----------------caagcaagcccccaggcctgcg--------------------------- +-------------------------------------------------cct---------------agcag +tgcttcat-----------ctgtg------------agatcaaattctacccaactcaccagt--------- +----------ctgggc-------tcccactc------ctctggatcttcgaggtccagtggatccaccgtgg +tcagctcac------tgc--------------------------------cct------------------c +ttcgag---------------------------------------taggactagggagtgggtaaacagtca +aaatctcaatttggaaccccatttgc---ctgggtcgctgaagacagcctttgtcaccccaccatcaagtgc +tgcttca---agct------------------------------caggaa---cagtctcaactgtgcctaa +aggtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG551869.1/1-7307 |Norovirus GII strain Hu/GT/2012/GII.P23-GII.23/Guatemala City3872 nonstructural polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------acttgtggccat +g----------------------------------------------------------------------- +------------------------------------------------------------------------ +-------------------------------------ttgtaaatgg------tgaggacatagtcatcaag +tataccaaac----------aagg---ggatacagtcagtggagtgcccaccgtctccactgcagacatatc +cccattgcatgacaccgcatatagtgtcccccccttggaccagagggaaaaggtggacgcaaaagaacccct +aaccgggtcaatacttgagatgtgggatggtgagatctaccattacgggctctatgtggagaaagggcaagt +tcttggtgtgcacaaaccaccagctgctatgagcattgcacgcatcgaactgacccccctctctctatactg +gagaacagtttacacacctc---cctacctggtggctcctgacacccttaagaagctccacggtgagacatt +cccctacacagcatttgataacaactgctactcattttgttgttgggttctggacctgaacgactcgtggct +caa---tagaaaattcgtgtcaaggaccacaggcttctacagaccctaccaggagtggaacaggaaaccatt +gccaaccatggacgaaggaaagcttaagaaggtggccaacgtcttcctgtgtggcctgtctgggcttttcac +caggcccatcaaagatctcataggcaaactgaaaccactgaacgtccttaacattgtcaccaattgcgattg +gacgttcccgggagtcgtagaggcgatcatcctcctcgcagagctcttt---gggatcttctggacaccacc +agacatatctgccttcgtcgcctctctgttaggtgactatgagatgcaaggccccgaggacattgcgaccga +gatagtcccagtcattctaggtggtattggcatggtacttggtttcactaaagagaagatcggtcggttact +gggctccgcggcatcatcactcagggcctgcagggaaatcggcaactatgggatagaggtggtaaaattggt +gatgaaatggttctttccaaccaaaagtgaggtcaatgagatggaaatggtcagaacaatagaggacgcagt +gctcgactttgaggcaattgaaaacaatcacatgacagctctactcaaagacaaaaatagtctggccacttt +cctcagggcattggatatggaagaagagaaagcgcggaaactatcaaccaaatccgcgtcccccgacatagt +cggcactataaatgcactcctggcgagaatcgccgctgctaggtcactggtgcacagggctaaggaagagat +gtcatcaaggatgcgtcctgttgtcatcatgatatccgggcgacctgggatagggaaaacccatctggcccg +tgacctagctaagaaaatggcagccactctgtcaggtgatcagagagtgggcctggtcccaaggaatggtgt +tgaccattgggatgcatacaagggagaaaggatcgtcctgtgggatgattacggtatgagcaaccccgtggc +agacgccctccgactccaggaactcgccgatacatgccccctgacactcaactgtgataggatagagaacaa +aggaaaggtctttgacagtgacaccctgatcatcactactaatctggccaacccggcccccctggactatgt +gaactttgaagcttg-ctcacgccgcatagatttcctcgtttatgcggactctccttcagttgataaggcaa +agagagacttcccaggccaaccagacatgtggaaagacgccttcaaaccagacttctcacacataaagctac +aactggcaccacagggaggatttgacaagaatggaaacaccccacatgggaagggcgtcatgaaaacactaa +ccacacactccctcatagcccgtgccaccggtttactccatgaaagattagatgagtttgacttacagggtc +aagaattgccagtctacaacttcgaccaaaacaaggtggccgctttccggaaactagcggctgacaacaagt +atggtctcatggacactttgagggcaggcaacaaactaaaggaggttaagaatctagaccaattcaaggaag +cggtgaaggacatccgcataaagccttgcaggataatttacaactcaatggcttatgatctggattcaaatg +gatcaggcagagtcaatgttaagaaagtgggagaccaaaggatccaggccaacaatgaactcaactccgcac +tcaacaaactgcgcggggctagaatcagatactatgtgaagtgcttccaggaaatggtctactcccttctcc +agtttgctggtgcggccttcgttacatcaagaatggcacaaagaatga------atgtcaacaagctgtgga +caaaaccaga------------aaaaca--------acaggaagcctctgcagggccccccaccccccca-- +--------actgaag---agtggaccataacaccaatggacacgatccaggaaggtaagaagggcaagaaca +aaagtggtaggggtaagaagcacactgcattctctagtaagggccttagtgatgaggagtatgatgagtaca +agagaatcagggaggagcgccaagggaagtactccatagaagaatatctccaggacagggaccggtac---t +atgaagaattggccatagccaaagcaacagaggaggacttctgtgaggaggaggagatcaagataaggcaaa +gaattttccgcccaaccaggaaacagcgtagggaggagagagccactctaggccttgtcacaggcagtgaga +ttagaaagaggaaccccgatgatttcaaaccaaaaggaaaactgtgggctgatgatgaccgtagtgtcaact +acaatgaaaggatagactttgaagcccctcccagcctttggtccagaatagtcaacttcggttcgggttggg +gcttctgggtctcat-caaatttgttcatcacctccacacacgtcatcccacaaaacatgtctgaggctttc +ggggtaccaataagccaaatccagatacataggagtggagagttctgcaaaatgaggttcccaaagaccatc +aggcccgatgtctctggcatgattcttgaggaaggcgcgcctgaaggcacagtggtgaccatactggtcaaa +agaccaactggtgagctcatgccattggcagctcgcatgggcacccacgccaccatgaaaatacaggggagg +atgattggaggtcaaatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcacagtgtct +ggcgattgtggctgcccttatgtctacaaaagaggcaatgattgggtagttatcggggtgcacaccgccgcc +gccaggggtggcaacacggtgatctgtgccactcaggggccagatggtgaagccacacttgagggtggcgac +aaccatgggacctattgtggcgcgccaatattaggtccaggaaacgccccgaaactcagcaccaagaccaaa +ttctggaggtcctccaacaccccgctcccccctggcacatatgaaccagcctacctcggtggtaaggaccca +agggtcaagggcggcccatcactacaacaagtcatgagggagcaactcaagcccttcactgccccacgtgga +aagccaccaaggccagcagttttggaggccgctaaggaaaccatctgcaatgtgctggagcaaaccattgaa +ccgccccaaagatggtcctatgcacaggcttgtgcttccctagacaaaacaacctcaagtggctacccccac +cacaagaagaaaaatgacaattggaacggtgaaaccttcactggtgttctggctgatcaggcttcaaaagca +aatctcatgtatgagcaggggaaacacatgcagcctgtgtacacaggcgcgctcaaagatgagcttgtcaaa +accagcaagatctatgaaactattaagaagagactcttgtggggttcagacctcggcacaatgatacgctgt +gccaggtcatttggtggtctcatggatgaaatgaaggcaaactgtgtgaacctaccagtcagagttggcatg +aatatgaatgaagatggtcccataatctttgaaaagcattcaaagtacagataccactatgatgctgactat +t-ccaggtgggactcaacacaacagagatgtgtcctgggtgctgcacttgacataatgg-ttaggtactcag +ccgaaccagaatt-ggcacaaatcgtggctgaggacttgctgtcgcctagcgtcatggacgtcggcgacttc +aaaatcaccataaatgagggcttaccatcaggagttccgtgcacatcccagtggaactcaatagctcattgg +ctgttaacactctgtgccatgtcagaagtctcaggactgtcaccagatgtggtacagtcaaattcatgcttc +tctttctatggggatgatgaaatagttagcactgacatcaaattggacccccaaaaactgactgacaagttg +agagagtatggcttaattccaactaggcccgacaaaacagaaggaccactcataatcagagagagtctagaa +ggtctaacattcttaaggagggatgtgtgcagagacccagcagggtggtatggcaaacttgaccaatcctca +atcatgagacagttgtactggacaaaaggacccaaccatgaggaccccaatgaaacaatgatcccacattcc +cagaggccagtgcaattgatgtccctacttggtgaggcggccctacacggaccgacgttctataagagagtt +agcaagttggtcatcactgaattaaaggaaggtggaatggatttctatgtgcccagacaagaacctatgttt +agatggatgagattctctgacttaagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtggcaggaggagcaattgcagccccactaactggacaaacaaatttcattga +tccctggattagaggtaattatgtgcaagcaccaaatggtgaatttacagtgtcccccagaaattcgcccgg +tgaaattttgcttaatttagaattaggccctgaactcaacccattcttgtcccatctatctagaatgtataa +tgggtatgctggcggtgttgatgtccaagttatcatggcaggcaatgccttcaccgc---tggtaagattat +ctttgcagcaatacctccccacttccccgtggaaaatcttagtccccctcagatcaccatgttccctcatat +tatagtggatgttaggacccttgaacccataaatatccctgtaccagatgttaggaacaacttcttccatta +taatcaaaacaatgag---tctcgcatgagactggtggccatgttgtacacccctcttaggtctaatgggtc +tgctgaagatgttttcacagtgtcatgtagggtcttaacaaaaccatctgcagactttgaattcaattatct +agtccccccaactgtagagtcaaggactaaacccttcacaataccaatactcacaattggggaaatgacaaa +ttcaaga---ttcccagtgcctattgacatgcttcataccagtccaacagaaaacattgttgttcaaccaca +aaatggcagatgcaccatagatggtgagttgcttggcaccactcaactgatcacttccaatatctgttcatt +cagag-----------------------------------------gatccatctcag-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgacc----------------------------------aacacctg----------------- +----------tggcacctcaacatcacaaaccccaatggcactccttttgaccccactgaagatgtacctgc +cccccttggaaccccagatttcaggggtcaattgtacggtgtcatctcccagc---gagacagagagggaac +accctcg-----gaaaacaatcagaaggcaaac--------agg-----------tcccacgagggagtgat +ttcaacaatctcaccaaaatttgtccccaagttaggttcagtcatgattggca---------catggactac +tgatgatat---caa---aaaccagccatcca---------------------------agttcaccccaa- +--------ttggc------ctcaatgatgatg------------ataattttaaacaatgggaattgccaaa +ttattctggggcg-ctcact------ctcaacatggggttggcacctagtgttttccccacctatcctggtg +aacaaatccttttcttccgctcctatctgccaa------tgaagggagggta------cggta--------- +--gtccatttattgactgcctagtacctcaagaatgggtcgctcacttctaccaggagtcagcacccgcaca +aacagatgtggccctaatcaggtatgtaaaccccgaaacaggacgtgtccttttcgaggccaaattgcacag +acaggggttcattaccgttgccaagagcggcgacagccccatcaatgtgcctgccaatggttattttaggtt +tgattcttgggttaaccagttttactctcttgcccccatgggaactgggaacgggcgtaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacacagta +gggtctctagttaatgcagg---agctaatgctattaatcagaaaattgattttgagaataataaatat--- +------------------------------ttccaaaatgcatcatttgcccatgataaggatatgctgaaa +gcacaggttgaggcgaccaggaaacttcaggctgacatgattgccatcaagcaaggagtattagtcgcgggc +ggcttttcccctactgatgcagctcggggagcaatcaacgcccccatgacaaaggccctagattggaatgga +acaaggtactgggcgccaaatgccacctccaccacttcaatgtcaggtggcttcacagga------------ +ca-----------ggtttcgcacgggaccataccaaat---------------------------------t +ttaaaac----------------caaccaggctcccaaaccccca--------------------------- +-------------------------------------------------cct---------------agtag +tgggtctt-----------cagta------------aggtccaactcaacccaactcactagt--------- +----------ctgagc-------tcccactc------ctctgggtcatctcgatccagcggatcaacagtgg +ttagctctt------tgc--------------------------------ctt------------------c +ttctag---------------------------------------caggactagggattgggtcaatcaaca +aaatctcaatttggaaccacatttgc---ctgggtctctcagaacagtttttgtcactccaccatctagttc +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatctgcat------------tcaacacacacagacagccgctttttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagattatt------ +-tta-a-att-tgat------------------------------------ttaattt------taaatttg +a------------ttgg---cat------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209431.1/1-7514 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Tochigi-46 RNA, nearly complete genome +-------------------ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaagtat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacttacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctactctgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagtagtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggcaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcagatattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgccttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---tcc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209432.1/1-7515 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Tochigi-30 RNA, nearly complete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggattttcctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagcttcggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgattacatagtcattggagtgcacacagcagca +gcccgaggtggaaacactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaaacccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209433.1/1-7539 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Tochigi-26 RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gataaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgagtgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaacttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattgattttt---accttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>LC209434.1/1-7515 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Tochigi-17 RNA, nearly complete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggcgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgttaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgagttggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgctgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactctggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcagagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagcaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacaaaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggccagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtgattgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcagaccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209435.1/1-7530 |Norovirus Hu/GII/JP/2004/GII.P12_GII.2/Tochigi-92 RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacag +aga---------------------cccccacgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaaccagtggtt +tcttatagcg----------tcaa---agatggtgtttccggcttgcctgagctcatcactgtcaggcagcc +ggatgtagtcaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggaaccact +aactggaacaattctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtctagt +acttggcgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gaggccagtgtacacacctc---agtatctcatttctccagacactcttaggaggctgcacggagagtcgtt +cccctatacggcctttgacaacaattgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +aag---taggagaatgattcagagaacaactggtttctttaggccctaccaggaatggaataggaagcccct +tcctaccatggatgattccaagttgaagaaggtagctaacgtgttcctgtgcgcgctttcttcactattcac +caggcccatcaaagacataatagggaagttgagacctctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctgggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtcccaatagtgatgggggggattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgcaaagaccttggtgcatacgggctggaaatcttgaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggacgcggt +gctggacctcgaggcaattgagaacaaccacatgactgcccttcttaaagacaaagatagcttggcaaccta +catgagaaccctcgacctcgaggaggagaaggccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaatgctcttctggcgagaatcgccgctgcgcgctccctggtgcatcgggcgaaggaggagct +ctctagcagaccaagacctgttgttgtgatgatatcaggcagaccagggatagggaaaacccaccttgccag +ggaattggccaagagaattgcagcttccctcacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccattgggacgcatacaagggagaaagagtcgtcctgtgggacgattatggaatgagcaatcccatcca +tgatgccctcagattgcaagaacttgctgacacctgccccctcacgctaaattgtgacaggattgagaataa +aggaaaggtatttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagatgcccctgaggtcgaaaaggcaa +aacgtgacttcccaggtcaacctgacatgtggaagaacgcttttagtcccgacttctcacacataaaactga +cgctggctccgcagggaggcttcgacaagaatggaaacaccccacatgggaaaggcgtcatgaaaactctca +ccactggctctctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caacccccaccaccttcaacttcgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +acgggttaatggacacaatgagagttggtagacaactcaaggatgtcaggaccatgccagagctcaaacagg +cactcaagaatatctcaatcaagaggtgtcagatagtgtacagtggctgcacctacacgcttgaatctgatg +gcaagggtgacgtgaaagttgatagagttcagagcgccactgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgtgccagaattagatactatgtcaagtgtgttcaggaggccctgtactccatcatcc +aaattgctggtgctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctttggt +ccaaaccacaggttgaagatacagagga--------gactaccaacaaggatgggtgcccagaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaaatactccatagaagagtaccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaggaagaagaagccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagagcctccctcggcctggtcacaggctctgaaa +tcagaaaaagaaacccagacgatttcaagcctaaagggaagctgtgggctgatgacgacaggagtgttgact +acaacgagagaatcaattttgaagccccaccgagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagtctgttcataacatcaactcatgtcataccccatggcgcacaggagttcttt +ggagtttctatcaaacagattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcgcccgaagggaccgtggccacattactcatcaag +aggccaactggagaactcatgcccttggcggccagaatgggaacccatgcaaccatgaagatccaagggcgc +accgttggaggtcaaatgggcatgcttctaacaggatccaacgccaagagtatggatctgggcaccacaccg +ggtgactgtggttgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacggctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggtggtgac +aacaagggaacttactgtggtgcaccaatcttaggtccaggtagtgccccaaaactcagtaccaagactaaa +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaagacccc +agagtcaagggtggtccttcattgcaacaagttatgagggaccagctgaaaccatttactgagcccaggggc +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctcaaaaatggtcattcgcgcaagcatgcgcgtccctcgacaagaccacctctagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgtacgaagagggaaagaacatgactccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaaaatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgggcttttgggggcctgatggatgaacttaaagcacattgtgtcacactccccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgaaagacactccagatataaatatcactatgatgctgattac +t-ctcggtgggactcaacacaacagcgggccgtactagcagcagccttagaaatcatgg-ttaagttctccc +cagaacctcacct-ggcccaaaaggttgcagaagacctgctctcccccagcgtgatggatgtaggtgatttt +aaaatatcaattaatgagggcctcccctccggggtaccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcactttctgaggtcacaaacctgtcccctgacatcatccaggccaattccctcttt +tccttctatggtgatgatgaaattgtgagcacagacgtaaagctggacccagagaagctgacagcaaaactc +aaggaatacgggctgaaaccaacccgccctgacaagactgaggggccccttgttatctctgaggacctgaat +ggcttgaccttcctgcggaggactgtaacccgcgatccagctggctggtttggaaaactggaacagagttca +atacttaggcaaatgtactggactagaggccctaatcatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtctttgctgggcgaggctgccctccacggcccagcgttctacagcaaaatc +agcaagttagttattgcagaactaaaggaaggtggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacctgtggctggtgccgctttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctgttgagtctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcatttcccggttgaaaaccttagtccacagcaaattaccatgttccctcacgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgtgcgaaataatttctttcatta +taatcagaaagatgat---cctaaaatgagaattgttgctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctctcctgattttgatttcacgtacct +ggtgccaccaacagtggaatccaaaacaaaaccatttacccttccaatcctcacacttggggagctttccaa +ttctaga---ttcccagtgtctatagatcagatgtacactagccccaatgaagtcatatctgtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagttaccgcccacttgc----- +----atgacaat-------------------------------------------------------g---- +-------atcacc----------------------------------tatataat----------------- +----------------gtcaccattacaaacttgaatgggtccccttttgacccctctgaggacgtccccgc +ccctttgggcgtgcctgacttccagggaagggtctttggtgtcatctcccaaa---gagataaacaga---a +tgccgct-----ggacataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggtcaagttcaaattggca---------catggcagac +cgacgatct---ccaagtcaatcaaccagtta---------------------------aatttaccccag- +--------tcggcc---------ttaatgatactg---------agcattttaatcaatgggtggtccctag +gtatgctggtgct-ttaaat------ctaaacacaaatcttgccccttctgttgctccagtgtttccagggg +agcgcctgctctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--acccagccattgattgcctactaccacaggagtgggtgcaacatttttatcaggaagcagccccttcaat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgggcactgtttgaggccaagctccatag +ggctggtttcatgacggtctcgagcaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtaaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aatgatggctggggcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcagaga--- +------------------------------ttacagcaaaattccttcaatcatgacaaggagatgttgcag +gctcagattcaggcaaccaagcagctgcaggcagacatgatggctataaagcaaggggtattgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcacccatgacacaggcgctggactggaacggc +acacggtattgggcaccaggctccatgaggactacatcttactctggaagattcacatcga----------- +-------------------------------ccgctcc---------------------------------g +gtgaggc----------------aagccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggccttcgag------------tgg +c---tctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaaccctg +atcacaaccactgggt-----ccccacatgg------tacaacctc------------------------at +ccaattc--------gactcgtagcacaaacctctcccagtcgacggtctctag---------------ggc +cacatc---------------------------------------taggactagcgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct------g------------------------------gcggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggtga-------- +---a-a-a-t-ttgttc---aaa---at--------------------------gaat--------tgatc- +---------------tt---atcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>LC209436.1/1-7526 |Norovirus Hu/GII/JP/2004/GII.P2_GII.2/Tochigi-85 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagtgtgccccccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaattgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctggcatagtagagtcactaatcttcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagatcttggagcctatggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagggtgggcctcatcccacgtaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggagctggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgccctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcattggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgtaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccatctcagaaatgttacgaccatggatgaactgaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacacttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gag----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccggtaagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggatctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccagacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggcatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtagctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacccaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacatcacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaaaatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggccc---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaactcg------ +-------------------------------actcgcaacacaaacctcccccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccacctcccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209437.1/1-7519 |Norovirus Hu/GII/JP/2004/GII.P2_GII.2/Tochigi-87 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagatcttggagcctatggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaattggcaaagaaaattgcctcgacgctcacaggagatcagagggtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggagctggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcattggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgtaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacacttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gag----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagttttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aaaccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtaacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccagatgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggatctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatacggcctcaaacccactcgtccagacaaaactgaaggccccctgatcattagtgagggtctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgagtctagagttgggtccagaattaaatccttttctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacatcacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ttaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggccc---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaactcg------ +-------------------------------actcgcaacacaaacctcccccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------t-----tctt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209438.1/1-7523 |Norovirus Hu/GII/JP/2004/GII.P2_GII.2/Tochigi-86 RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtacctcatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagatcttggagcctatggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagggtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggagctggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcattggttgcacgtgcctctggcctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacgcttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gag----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaagggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +gcggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatttgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggatctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccagacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgattgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacatcacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgccggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggccc---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatga------cacagcctcatc----------aaactcg------ +-------------------------------actcgcaacacaaacctctcccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------t-----tctt------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209439.1/1-7536 |Norovirus Hu/GII/JP/2014/GII.Pe_GII.2/Saitama-127 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgctttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtt-------aaaaagatccc +tcc-----------------------------tcctccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agacggcgtttccggattgcctgagctcaccactgtcagccaacc +ggaagaaaacaacacggcgttcagtgttcccccactcaaccaaagggagaacagggacgccaaggaaccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtagaacggggtcttat +acttggtgtgcataagccaccggcagccatcagccttgccaaggtcgagctgacaccactctctttgttctg +gagacctgtgtatacccccc---agtacctcatctctccagacactcttaggagactacatggagaatcatt +cccctacaccgcatttgacaacaattgctacgccttctgctgttgggtattagacctaaacgactcatggtt +aag---taggagaatgattcagagaacaacaggtttcttcagaccataccaggaatggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +cagacccattaaggacataataggaaaattgaaacctcttaatatcctcaatattctggctacatgtgattg +gaccttcccaggcatagtggaatccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcacccccttactaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +gtcgtccgctgcatccactttgagagcttgtaaagaccttggtgcatacggactggaaattctgaaattagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaacgctctcctggcacgaatcgccgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggctgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgctag +ggagttggccaagaggatcgcagcctctctcacaggggaccagcgtgtgggtctgatcccacgcaatggcgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatgggatgagcaaccccataca +cgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatttggccaacccagcaccactggattatgt +caattttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcggaagctcctgaggtggaaaaggcga +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgg +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcaggattactccatgagaggctagatgaatatgaattacaaggcc +cagccctcaccacttttaactttgaccgcaacaagatacttgcgtttagacagcttgctgctgaaaacaagt +acgggctaatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtcgcgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgataaagtgcaaagtgccaccgtgcaaaccaacaatgaactagctggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcgttcgtcaccacgcgcatcgccaagcgaatga------acatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccagcagagatggttgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagagacaagtac---t +atgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctaggcttgatcacaggctcagaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaagccccaccaagcatttggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtttgtttataacatcaacccatgtcataccccaaggagcaaaagagttctac +ggagtccccgtcaaacaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggtatgattctggaagaaggtgcgccagaaggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctttggcagccagaatggggacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcttgacaggatccaacgccaagagtatggacttgggcacaacacca +ggcgactgcggctgtccctacatctacaaaagagggaatgactacgtggtcataggagtccatacagccgct +gcccgcggaggaaacactgtcatctgtgccacccagggcagtgagggagaagccacacttgaaggaggtgac +aacaaaggaacgtactgtggcgcaccaatcttgggcccagggagtgctccgaaactcagtaccaagactaag +ttttggagatcatccacaacgccactcccaccaggcacctacgaaccagcctacctcggtggcaaggatccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aagccaccaagaccaaatgtgttggaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +cacatacggaaaaatgattactggaatggggagtcctttacaggaaaattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcactaaaagatgaattggtaaaa +actgacaaaatttatggtaagatcaagaagaggctcctgtggggctcggacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcaccctccctgtcagagttggtatg +aacatgaatgaagatggccccataatctttgagaagcactccagatacaggtatcactatgatgctgattac +t-ccaggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacactt-ggcccagatagttgcagaagacctcctttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctccggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagtacagatataaagttggacccagagaagctaacagcaaaactc +aaggagtacgggctgaagccaacccgccccgataaaactgaaggaccccttgttatctccgaagatctggat +ggcctgacattcctccggaggactgtgactcgtgacccagctggctggtttggaaaattggaacaaagctcg +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagaattgaaggaaggcggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgctgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttccccccgtaatgcccctgg +tgaagtgcttttgaatctagagttgggtccagagttaaatccttacctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggtaagttggt +cttcgccgccgtgccacctcacttcccgattgaaagcctaagtccacagcaaattaccatgtttccccatgt +gattatagatgtgagaactttggaacctgttttattaccactccctgatgtcagaaataatttctttcatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcatgcagggtgttgactagaccctcccctgattttgattttacatattt +ggtgccaccaacagtggaatctaaaacaaagccattcaccctcccaatcctcacgcttggggaactctccaa +ttctaga---tttccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcaatgtca +aaatggtaggtgcacactagatggggaactccaaggaacaacacaacttcaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaggtgaccgcccacttgc----- +----atgacaat-------------------------------------------------------g---- +-------accacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctctgggtgtacctgattttcagggaagggtcttt--ggtatcatctccca---gagagacaaacataac +agtc-ct-----ggacataatgaaccagcaaac--------agg-----------ggacacgacgccgtggt +ccctacttacacagcacagtacaccccaaaattgggtcaaattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagcca---------------------------agtttaccccag- +--------ttggac---------tcaatgacactg---------aacattttaaccaatgggtggtccccag +atatgctggtgct-ctaaat------ctcaatacaaatcttgccccttctgttgctccagtgttcccagggg +agcgcctgctctttttcagatcatatattcccc------tcaagggtggtta------tggaa--------- +--atccagttattgattgcctgctaccacaagagtgggtgcaacatttctatcaggaagcagcccctgcaat +gagtgaggtggcccttgtcaggtacatcaacccggacactggtcgagcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggtcgtgcctgcaaacggatacttcagatt +tgattcttgggtgaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttctcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctagattggaacggc +accaggtattgggcaccaggctccatgaggaccacatcttactctggaagatttacatcaa----------- +-------------------------------ccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcatacccagagccggccttcgag------------tgg +c---tctt-----------ctgtg------------tcctccttcactactcagtcttcaaggccaactctg +actacaactactgggt-----cctcacatgg------cacagtttc------------------------at +caaattt--------gactcgcagcacaaacctctcccaatcaacagtttctag---------------ggc +cacatc---------------------------------------taggacaggtgagtgggttagagatca +aaatagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct------g------------------------------atggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggtga-------- +---a-a-a-t-ttattt---aaa---at--------------------------gaat--------tgatt- +---------------tt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209440.1/1-7519 |Norovirus Hu/GII/JP/2015/GII.P2_GII.2/Saitama-169 RNA, nearly complete genome +---------------------cgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----gacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gtcccgagggagaaaccccca +aga---------------------ccccctagaccaccaacaccagaattgatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagttggtcaacc +acctgaagctaacacagcctttagtgtgcctcccctcagccaaagggagaatagggacgctaaggaaccgtt +aactggaaccattctggaaatgtgggatggggagatctatcattatggtctgtatgtggaaaaagggcttgt +gttaggcgtgcacaagccgccggctgccatcagcatagccaaagtggagttaacgcccctctcactgtactg +gaggcctgtttacacgcctc---agtaccttatatctcctgacaccttgaggaaactccatggtgaattatt +tccctacacagcctttgaaaacaattgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---cagaaggatgattagcaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +cccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccattaaggacataattggtaaacttaaacccctcaacatcctaaacatcctggcctcatgcgactg +gacctttgctggcatagtagagtcactaatcctctttgctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctgcaaggtcccgaagacatcgctgtgga +gctcgtgcccgttgttatgggtgggataggcttggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgtaaagatcttggagcctacggattggagatcctgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacttggaggccattgagaacaaccacatgaccaccctattgaaagacaagaacagccttgcagccta +catgaagaccctggacatggaagaggaaaaagctaggaagctgtccaccaaatcagcctcccccgacattgt +gggcactataaacgccctgctggctaggatcgctgccgcacgttccttggttcatagggccaaggaagagct +ctccagcagaccaaggccagtcgtcctgatgatctccggcaaaccagggataggaaagacccatttggccag +agaactggcaaagaaaattgcctcaacactcacaggagatcaaagggtgggcctcatcccacggaatggagt +tgaccattgggacgcctacaaaggagagagagtggtgctctgggatgactatgggatgagcaaccccattca +cgatgcactgaggttgcaggaattggcagacacatgtccactaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgacagcgacgcaatcataattaccaccaatttggtcaatcccgcgccgctggattatgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggactttcccggtcaaccggacatgtggaaggacgcctatcgacctgacttctcacatattaaattgc +aacttgcaccacaaggtgggttcgacaagaatggcaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcgctggttgcgcgtgcctctggtctcttgcatgagagattagatgagtacgagttacagggcc +cgcccctttcaaccttcaactttgaccgcaacaaaattgcagcgttcagacaacttgccgctgaaaacaagt +atggtctagtggacacgatgaaggtgggcaaccagctcagaaatgtcacgaccatggatgagctcaagaagg +ctatcaagaacatcacaatcaggaagtgccagatagtctatggtggcaacacttacacgcttgaatctgacg +gcaagggtaaggttgtagttgagagggtgcagaacgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacatcaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtgacttcacgcatcgtaagccgcatga------acatccaaaatttttggt +ccagaccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccctaaacctagg-- +-gaa----gaagagg---agtttatcgtctcttcagatgatatcaagccagagggcaagaaaggcaaaaaca +agagtggccggggcaagaaacacacggcattctcgagcaaaggtctcagtgatgaggaatatgaagagtaca +aaaggatcagagaggagaggaatggcaagtactccatagaggaatacctacaggacagagacaaatat---t +atgaagaggtggccattgccagggcaactgaagaagacttctgcgaagaagaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggccttgttaccggatctgaga +tcaggaaaaggaacccagatgacttcaagccaaaaggaaagctgtgggctgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtatcgc-ccagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacccataaggcaggtgcaaatacacaaatcaggcgaattctgtcgactgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgactatgaggatacaagggcgc +acagtgggcggccagatggggatgctgcttactgggtccaacgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctacatttacaaaaggggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacacagtcatctgcgccacacaaggtaatgagggtgaggccacactcgagggtggtgac +aataaaggaacatactgcggggcaccaatcctaggccccgggaatgccccaaaactgagcactaaaaccaag +ttctggaggtcctccacaacgccactcccacccggcacgtacgagccggcatacctaggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagcgtccttgaagctgctaaaaagacaattatcaatgtgctagaacaaacaatagat +cccccacaaaaatggacgtacgcgcaagcgtgcgcgtctctcgacaaaaccacatctagtgggttcccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaagcatcaaaagca +aacttaatgtttgaagaggggaagcacatgaccccagtttatacagctgcccttaaggatgagctggtcaaa +actgagaaagtgtatggaaaaataaagaagaggttgctttggggctctgatctggccaccatggtgcggtgc +gcacgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aacatgaatgaagatgggccaatagtctttgagaaacactccagatataggtaccactatgatgcagactat +t-ccaggtgggactcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaagggttgccatcgggtgttccttgcacctctcaatggaactccatcgcacattgg +ctccttactttgtgtgccctttctgaagttacagacctctctcctgacattatacaagccaactccctcttc +tccttctatggagatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacgggaaagttg +agagaatatggtctcaaacctactcgtcctgacaaaactgagggccccctggtcattagtgaggacctgaat +ggcctgactttcctgaggagaaccgtcacccgcgatcccgcgggatggtttggcaaactagaccaaagctcc +atacttaggcaattgtattggactaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcacttttgggcgaggcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatccgaattgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgagcccgtggctggtgccgctttggcagccccggtcactggtcagacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctactgaatctggagttgggtccagaactaaatccttatctggcacacttagcaagaatgtataa +cgggtacgccggtgggatggaggtgcaggtcatgctggctgggaacgcgttcacagc---cggtaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagtccacaacaaattaccatgttccctcatgt +gattatagatgtgaggactttggaacctgttttactaccactccctgatgttagaaataatttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgtagggtgttaactagaccctctcctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtctatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagctccaaggaacaacacaacttcaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgcccac--------- +-----------ttacatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaat----------------- +----------------gtcaccatcacaaacttgaatggatccccttttgatccctctgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgttatctcccaaa---gagacaa--------- +-----ac-----acaacagccctggacataatg----aaccagc----aaacaggggacacgatgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cactgtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acatttcaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtgtttccagggg +agcgcctactcttcttcagatcatacatccctc------tcaaaggtggcta------tggaa--------- +--atccagccattgattgcctactaccacaggagtgggtgcaacacttctatcaggaggcagccccctcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcaagtaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgattcttgggtgaaccaattctattctcttgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacaacaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaagcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgcagtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctgggaggtt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgacct--------------------------------------- +------------------------------ccagcacacccaaagccggctt---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaagaccaactttg +gccacaactactgggt-----cctcacatgg------cacagcttcatc----------aaattcg------ +-------------------------------acccgcagtactaacctctcccaatcaacagtttctagagc +cacatc---------------------------------------tagaactggtgagtgggttagagacca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccctccagtag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacactcgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>LC209441.1/1-7517 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Saitama-126 RNA, nearly complete genome +--------------------gcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttataaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgtcccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggcttaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgcccccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtatacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aactcgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctactccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +ataatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagat +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaatacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaagtaatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggacctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagaccaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacgctggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgtttt +taagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtacgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccatag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagatttacgtcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209444.1/1-7520 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Saitama-123 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacctatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgtcgccccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209445.1/1-7531 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Saitama-122 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccgcaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcctaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggagttagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtgcctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctacggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatcccctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagagtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +ggggaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gtaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccaac +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggcataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggctcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtactcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtacatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtactggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggac +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgagttctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttagttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gccagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggtccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagagctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccaatggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggtaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgattttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccatag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctagctgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggactggaacggc +acaaggtactgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---tacctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>LC209446.1/1-7517 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Saitama-121 RNA, nearly complete genome +-----------------------tctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagccc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccctc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccattga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcagccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagttcacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaatcgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggtggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagtctgttcataacatcaactcatgtaatccctgcaggcataacagaagcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgcccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccattatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccttctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctagccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaaaagttaaccaccaaactg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcaac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +caatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaaaataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcagtgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtggttgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgccgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209447.1/1-7517 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Saitama-51 RNA, nearly complete genome +-------------------ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtaaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattatttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaataagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactggtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaagccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttactcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcagtgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcttattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209448.1/1-7512 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Osaka-9 RNA, nearly complete genome +------------------------ctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaatccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtgttgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatctggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209449.1/1-7533 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Osaka-26 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcgttcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggagccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccctaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagctgcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataaccacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattggtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggacgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgacacgtgtccccttaccttaaattgcgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctagtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtaatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttccaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacagaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctagtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttagcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccggaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtcccctttcgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +tcct--------gggcataacgaaccagcaaac--------agg-----------ggacacgatgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgatactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtcgcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgtgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaaccg----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209450.1/1-7616 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Osaka-225 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagtca-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagagaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgagtacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttagtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaagtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggcttgctgcatgagaggatggatgagtttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atggactggtggataccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctatcatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattctatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccact---agaccaaagcga--------gccagaggtcaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtattctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagagataaaaatccgccagc +gaatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctccgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtactcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggagaggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaagcgtgcgcttcacttgataaaaccacctctagtggacacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagactac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaacctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggcgatgatgtgtttacagtttcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttctaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtcctcttttgacccctctgaggacatccccgc +ccctctgggcatacctgactttcaggggagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgatactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctaaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactgttgaatgggtcagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------ggtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa +a +>LC209451.1/1-7548 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Osaka-18 RNA, nearly complete genome +---------------------cgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctatgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggtttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatacgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---cacagtcaaccaaccagcca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcttgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcggaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cactcaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaa--- +------------------------------------------------------------------------ +- +>LC209452.1/1-7521 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Osaka-038 RNA, nearly complete genome +-------------------ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaataattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggctag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcttcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttgccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgatgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaggagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aatgatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209453.1/1-7515 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Osaka-023 RNA, nearly complete genome +---------------------cgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctatacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattgat +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagttgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaagggagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaacccatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaggatggtccaataatgtttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aatgatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209454.1/1-7520 |Norovirus Hu/GII/JP/2010/GII.P16_GII.2/Osaka-019 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgaaaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggtgaagaa------gaaccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgtgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +gactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +gttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcattatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacactgcctttgacaataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatagatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaacatcttaaacattctggcgacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcaggggccagaagacatcgccgttga +gctcgtacctgtagtgatgggagggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +gctggaccttgaggcgatagaaagcaatcacatgacaaccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcagctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaagaattggccgacacatgccccctcaccttgaattgtgatagaattgaaaataa +gggaaaagtttttgatagtgatgttataataatcacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcttggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgcgcgtcaggtttgctgcatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatgggtccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +caaagccaccatt---agaccagagcga--------gtcagaggctaaggaggaggcccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcacgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcgattcagattcccaaaaccaatc +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagagctcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtacatttataaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggtgac +gacaaaggaacatactgtggggcacccattctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaatacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttgaagcccttcaccgagcccaggggt +aaacccccaagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggac +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggcaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaagcatatgacaccagtgtacacagcagcccttaaggatgagttggttaag +accgacaaaatctatgggaagatcaagaaacgtctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggtgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccacaact-ggcccaaacagttgctgaggatctgctggcccccagtgtggtagatgtcggagacttt +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctttgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagttca +atactaaggcagatgtattggactagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagagagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccacctcacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttactaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgcctccaacagtggaatctaaaacaaaaccattcactctcccaatcctcactcttggggaactttccaa +ttccaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaacttcaaggaacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttaaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagcca---------------------------atttcaccccag- +--------ttggactt---------aatgatactgaccac---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatcccc------ctcaagggtggtta------tggga--------- +--ctccagccattgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgactttaatcagagatta +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacaggggatcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgct------------------ac +tcagtcct-----------caagg------------ccgaccctgaccacaacca----------------- +----------ctgggt-----cctcatatgg------tacagcctcatc-----------aa--------at +tcgactcgc----aacacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgattgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---agt---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agtttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tatcta +a-aatgaattga-tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209455.1/1-7536 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Miyagi-8 RNA, nearly complete genome +--------------at---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaagggtacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacattctcaagaggctcaacggggaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagacttaggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcgctgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +ggggaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagggtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaactggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggctcccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagccattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagataaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtactaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgcacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggccataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccatccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctctgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattga-tttt---taccttttaaaaaa-------------aaaaaaaaa---------------- +------------------------------------------------------------------------ +- +>LC209456.1/1-7531 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Miyagi-7 RNA, nearly complete genome +----------------------gtctacc-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctaggtcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtatgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccctat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgccgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccattacctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttttatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattgattttt---accttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>LC209457.1/1-7559 |Norovirus Hu/GII/JP/2015/GII.P2_GII.2/Miyagi-63 RNA, nearly complete genome +----------------------gtctaac-gacgcttctgctgccgctgctgta------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccaaaggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagagctaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtatctggcctacctgagctcacaacagtcggccaacc +gcctgaagccaacacggcctttagtgtgcctcccctcagcctaagggaaaacagagacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggagatttaccattatgggctgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaactaacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggcgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggtcttggaccttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacattgttctgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gaccttcgctggcatagtagagtcactaatcctctttgctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcacacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaaccctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +actagacctggaggccattgagaacaaccacatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagctatccacaaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttccttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccgcgaaatggagt +cgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgattacggaatgagcaaccctatcca +tgatgcgctgaggttgcaggaattggcagacacatgcccattaaccctgaattgtgacaggattgagaacaa +agggaaggtctttgacagcgacgcgatcataatcaccaccaatctggtcaatcccgcgccgctggattatgt +caattttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgtcctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaagggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctgttgcacgaaagattagatgagtacgagttacagggtc +cgcccctctcaaccttcaactttgaccgcaacaagattgcagcgtttagacaacttgcagctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaaatgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgccagcgtgcaaattaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtactatgtcaagtgtgttcaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaggaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaaaccagagggtaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaggagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagatccgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccgccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagttcacacagcagcc +gctcgtggcggtaacactgtcatctgcgccacacaaggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctgggccccgggaatgccccaaggctgagcactaaaaccaaa +ttctggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttactgaaccccgtggt +aagccaccaaaaccaagtgtccttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcgcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +catgtgcgcaaaaatgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacgggaagataaagaagaggttgctttggggctctgatctggccaccatggtgcggtgc +gcgcgctcctttggtggtttgatggatgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtcttcgagaaacactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggacctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacatcgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagacattaaattagacccagaaaaactgacggggaagttg +agagaatatggcctcaaacccactcgcccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctaaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttagacaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgatcccacattcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaattgaaagaaggtggaatggatttttacgtgcccagacaagaacctatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcacctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtaccacctcatttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgacgttagaaataatttcttccatta +taaccagaaagatgat---cctaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtagaatctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---tttccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtaaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----acgatcacc----------------------------------tatataac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccccttgggcgtacctgactttcagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaataggggacatgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtga---------------------------aattcaccccag- +--------ttgggctcaatgatactga------------------acattttaatcaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgtctactaccacaagagtgggtgcaacatttctaccaggaggcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgagcactgttcgaggccaagctccacag +agctggtttcatgacagtctcaagcaacactagtgccccggtggttgtgcctgccaacgggtactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttacag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgctcc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------tcagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttccattactactcagtcttcaaggccaactctg +actacaaccactggat-----cctcacatgg------cacaacctcatc----------aaattcg------ +-------------------------------acccgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---gtggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcaaccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-atc----------ta---------------------------t-ccaaaat--------gaattg +-------a-----tctt---accttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaa--------------------------------------------------------- +- +>LC209458.1/1-7511 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Kanagawa-52 RNA, nearly complete genome +--------------at---ggcgtctaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtctgccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtatactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagacttaggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcgctgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggaggattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcagacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaacggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagggtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcatgaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaactggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtacaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaggaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcatccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctacgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggatcagagcaaattttgtccaggcccccaatggtgagtttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaacgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +ggttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggccataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209459.1/1-7524 |Norovirus Hu/GII/JP/2010/GII.P16_GII.2/Kanagawa-51 RNA, nearly complete genome +-------------gat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgttcacaaaccacctgcagctataagcatggcaaaagtggagctggcgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggtaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaagaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggcatgttgctcactggttcaaatgccaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacaaagggcagtactagcagcagccttggaaattatgg-tcaggttctctg +cagagccacaatt-ggcacaggtagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtgaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatccaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtactatttcccaaa---gagataaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcagtgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209460.1/1-7528 |Norovirus Hu/GII/JP/2010/GII.P16_GII.2/Kanagawa-50 RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctatggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacacgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------accagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatctcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209461.1/1-7520 |Norovirus Hu/GII/JP/2009/GII.P16_GII.2/Kanagawa-49 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgaaaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gaaccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgtgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +gactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcattatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacactgcctttgacaataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatagatgattctaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaacatcttaaacattctggcgacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcaggggccagaagacatcgccgttga +gctcgtacctgtagtgatgggaggggttggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +gctggatcttgaggcgatagaaaacaatcacatgacaaccctgctgaaagataaagacagccttgcagccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcagctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaagaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataatcacaacaaaccttgccaacccagcccctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagatgtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgattgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatgggtccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctagaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------acatacaagagctctggt +caaagccaccatt---agaccagagcga--------gtcagaggctaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcgattcagattcccaaaaccaatc +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagagctcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtacatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggtgac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaatacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttgaagcccttcaccgagcccaggggt +aaacccccaagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggac +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggcaagttggcagaccaagcatcaagagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaag +accgacaagatctatgggaagatcaagaaacgtctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatgaacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +gatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccacaact-ggcccaaacagttgctgaggatctgctggcccccagtgtggtagatgtcggagacttc +aaaatttcaataagtgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctttgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgacataaaattggatcctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggactagaggaccaaaccatgaagaccccaatgagacaatggtaccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacgggccctctttctacagcaagatt +agtaaattggtcataactgaacttaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagagagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccacctcacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttactaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgcctccaacagtggaatctaaaacaaaaccattcactctcccaatcctcactcttggggaactttccaa +ttccaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaacttcaaggaacaacacaactccaggtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttaaatgggtccccttttgacccctccgaggacattcccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttacacagcacagtacaccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------atttcaccccag- +--------ttggactt---------agtgatactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatcccc------ctcaagggtggtta------tggaa--------- +--ctccagccattgattgcctattgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgactttaatcagagatta +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacaggggatcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcacccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgct------------------ac +tcagtcct-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgattgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---agt---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tatcta +a-aatgaattga-tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209462.1/1-7520 |Norovirus Hu/GII/JP/2006/GII.P2_GII.2/Hokkaido-14 RNA, nearly complete genome +---------------------cgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----gacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcacccttaaacgag----cccttggggcccggcccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagagtccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggacaacc +acctgaagctaatacggcctttagtgtgcctcccctcagccagagggagaacagggacgctaaggaaccgct +aactgggacaattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcgctgtactg +gagacctgtgtacacgcctc---aatatcttatatcacctgacaccttgaagaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgattcatggct +aag---caggaggatgattagtaggactactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggacgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +tagacccatcaagaatataattggcaaactcaaacccctcaacatcctaaacattttggcctcatgcgattg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggtcagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagataagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccactaaatcagcctcccctgatattgt +gggcacaataaacgccctgctggctaggatcgccgccgcgcgctccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgtcctgatgatctctggcaaaccagggataggaaagacccacctagccag +agaactggcaaagaaaattgcctcaacactcacaggagaccagagggtgggcctcatcccacggaatggagt +cgatcactgggatgcctacaaaggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcagacacatgtccattaactctgaattgtgacaggattgaaaataa +ggggaaagtcttcgatagcgacgcaatcataatcaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgcatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgccctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcatgagagattagatgagtacgagctacagggcc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgagctcaagaagg +ctatcaagaacatcacaatcagaaagtgccagatagtctacggtggcaacacctacacgcttgagtctgacg +gcaagggtaaagttgtagttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcgg +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcgctccttc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccagaccattaactgaagatgcagatga--------ggccaccatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgatatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgctagggcaactgaagaagacttctgtgaagaggaagagattaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaacctcggcctcgtcactgggtctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaagtcaggcgaattctgccgcctgagattcccaaaacccatc +aggacagatgtgtcaggcatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgaggatacaaggacgc +gtggtgggcggccagatgggaatgctgctcactggatccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaatgattacatagtcattggagtccacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggcagtgagggcgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcttaggccccgggaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcgtatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccattcactgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtgggcacccccac +cacgtgcgcaaaaacgagcactggaacggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcatatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaagataaagaagagattgctttggggctccgatctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaaacccactgtgtgactcttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacactccagatacaggtatcattatgatgcagattat +t-ccaggtgggattcaacacaacagagagccgttctggccgcggccatggaaattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggacctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttcaatcaatgaggggttaccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaaattacagacctctctcctgacattgtgcaggccaactctctcttc +tccttttatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggtctcaaacctactcgtccagacaaaactgaggggcccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcggggtggtttggcaagctggatcaaagttcc +atacttaggcaactgtactggaccaaaggtcccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaggcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgagtctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattactatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactctccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaacgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgattttcagggaagggtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaacagccctggacataatg----aaccagc----aaacaggggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacggtctcgagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgattcttgggtgaaccaattttactctcttgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtctcgcaggggatgtgctcagcaatgggctc +agttcattaattaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttctcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacaatcaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacagtttctagggc +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgtgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcctag--t-----------gaaaaggtaa-------- +---a-a-att----------ta---------------------------t-ttaaaat--------gaattg +-------a-----tcct---acctt----------------------------------------------- +------------------------------------------------------------------------ +- +>LC209463.1/1-7536 |Norovirus Hu/GII/JP/2008/GII.P2_GII.2/Hokkaido-15 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcaccctcaaacgag----cccttggggcccggcccaaacagccg-gccccgggggaaaaaccccca +aga---------------------ccccctagaccaccaacgccagaattagtc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +gcctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactgggactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +attaggcgtgcacaagccaccagctgccattagcatagccaaagtggaattaacgcccctttcactgtattg +gagacctgtgtacacgcctc---aataccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggcttcttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgtttac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattttggcctcatgcgattg +gaccttcgctggcatagtggagtcactaatcctcatggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatctcggagcctacggattagagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggtcagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagataagaacagccttgcagccta +catgaagaccttggacatggaagaagagaaagctaggaagttatccaccaaatcagcctcccctgatattgt +gggcacaataaatgccctgctggccaggatcgccgccgcgcgctccttggtccatagggccaaggaggagct +ctccagcagaccaagaccggtcgttctaatgatctctggtaaaccagggataggaaagacccacctggccag +agaactggcaaagaaaattgcctcgacactcacaggggaccagagggtgggcctcatcccacggaacggagt +cgaccactgggacgcctacaaaggcgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcactgaggttgcaggaactggcagacacatgtccattaactctgaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagtgacgcgatcataatcactaccaacttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactagttgcgcgtgcctctggtctcctgcatgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacactatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacattataatcagaaagtgccagatagtctatagtggtaacacctacacgcttgagtccgacg +gcaagggtaaggttgtggttgagagggtgcagagcacaagcgtgcaaattaacaatgagatcgctggtgcag +tacaccaccttagatgtgccagggtaaggtattatgtcaagtgtgtccaagaggccatttactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattagccgaagatgcagatga--------ggccaccatgaaagaggggtgccccaaacctagg-- +-gaa----gaggagg---agtttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagtaaaggtctcagtgatgaggagtacgaagagtaca +aaagaatcagagaggagagaaacggcaagtactccatagaggaatacctacaagacagagacaaatat---t +atgaagaggtggccattgctagggcaactgaagaagacttctgcgaagaggaagaggttaagattcgtcaga +ggatcttcagaccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcactgggtctgaga +tcaggaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaagccccaccaagtatttggtctagaattgtcaactttggttctggatggg +gattttgggtttcac-ctagcctcttcataacatcaacacatgttatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaagtcaggcgagttttgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggcatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccatgcgaccatgagaatacaaggacgc +gtggtaggcggccagatgggaatgttgctcactggatctaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgcccctacatttacaaaaggggcaacgattacatagtcattggagttcacacggctgcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatactaggccccggaaatgccccaaaactgagcactaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcgtatctgggaggaaaagacccc +cgagtcaagggtggaccatctctgcaacaagttatgcgagaccaactgaaaacattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgccaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctctcgacaaaaccacatctagtggatacccccat +cacgtgcgcaaaaacgaacactggaacggggagtctttcacaggaaaattggctgaccaggcatcaaaagca +aatctaatgtttgaagaggggaaacacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +actgagaaagtgtatgggaatataaagaaaagactgctttggggctccgatctggccaccatggtgcggtgt +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattttcag +cagaaccacagct-agcccaaatagttgcagaggacctattgtcgcctagcgtggttgacgtgggcgacttt +aagatttcaatcaatgaagggttaccgtcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgatattgtgcaagccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaaactgacggggaaattg +agagaatatggcctcaaacccactcgtccagacaagactgagggacccctgatcattagtgaggatctgaat +ggtctgactttcctgaggaggaccgtcactcgcgatcctgcaggatggtttggtaagctggaccaaagctcc +atacttaggcaattgtactggaccaaaggccccaatcatgaagacccttttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaggcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +agatggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaacccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttcccccatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaacaatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggctc +aggtgatgatgtgtttacagtctcctgcagggttttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccctaatgaaatcgtatcagtgcagtgtca +aaatggtaggtgcacattggacggtgagctccaagggacaactcaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tgtataat----------------- +----------------gtcactatcacaaatttgaatgggtccccttttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtatcatctcccaaa---gggacaa--------- +-----ac-----acaatagtcctggacacaatg----aaccagc----aaacaggggacacgatgctgtggt +tcctacttacacagcacagtacactccaaaattgggtcagatccaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacattcccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccatag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaatggatacttcagatt +tgactcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgataaggagatgttgcag +gctcaaattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttctcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaagaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgccactcagtcttcaaggccaactctg +accacaaccactgggt-----cctcacatgg------catagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctctcaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagacca +aaatagaaatttgggaccctatatgc---atggtgccttacagacagcctttgtcaccccaccatctagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ca---------------------------t-ttaggat--------gaactg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209464.1/1-7531 |Norovirus Hu/GII/JP/2004/GII.P2_GII.2/Hokkaido-13 RNA, nearly complete genome +---------tgaagat---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagccaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttttgtgtgcattgtcatcattgttcac +tagacccatcaaggatataattggtaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctagcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagaacttggagcctatggattggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccctagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagggtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaaag +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacgcttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccacctcagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgattgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcataggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +ccccctcaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacgtctagtgggtaccctcac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaagataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagttgcagaggacctattgtcgcctagcgtggttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccggacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacaccacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctctttttcagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggttttatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgagaaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgactt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaactcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacaaacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +gggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209465.1/1-7525 |Norovirus Hu/GII/JP/2010/GII.P2_GII.2/Hokkaido-16 RNA, nearly complete genome +---------------t---ggcgtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacgtaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagctcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgatcctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggacataatg----aaccagc----aaatagaggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------tcaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaactctg +acaacaaccactggat-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ttaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209466.1/1-7520 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Hokkaido-18 RNA, nearly complete genome +--------------at---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggctttttcagaccataccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctagggttcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggtgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggtaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttaagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccagggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggggaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggtggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccgataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ctactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacacttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacccgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaacggttc +aggcgatgatgtgttcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggtgaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgtcgctccagtatttccaggag +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggaaatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209467.1/1-7523 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Hokkaido-17 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---taggaggatggtacaaaggacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +agattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgagaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaagccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggtatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcgctcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggatcctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctatagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgtttacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttaaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagataaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagtcggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatctggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgtt-- +---------tga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209468.1/1-6222 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Yamaguchi-4 RNA, nearly complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---gaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggccta-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaaccaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataaccgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggga--------- +--atccagccattgattgtctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209469.1/1-7522 |Norovirus Hu/GII/JP/2014/GII.P2_GII.2/Yamaguchi-014 RNA, nearly complete genome +---------------g---ggcgtctaac-gacgcttctgctgccgctgctgtt------------aacagc +a------ac----aacgacaacacaaaatcttcaagtgacg---------------gaatgtttaacaacgt +ggccgtcacccttaaacgag----ccctcggggcccggtccaaacagccg-gccccgagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaattcc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggtcaacc +acctgaagctaacacggcctttagtgtgcctcccctcagccaaagggaaaacagggacgctaaggaaccgct +aactggaactattctggaaatgtgggatggggagatctatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcatagccaaagtggaattaacgcccctctcactgtattg +gagacctgtgtacacgcctc---agtaccttatatcccctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggatcttaacgattcatggct +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtacattgtcatcattgttcac +tagacccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgattg +gactttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtgttctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggtaagatgct +ctcctctgcagcgtcaaccctgagggcatgcaaagatcttggagcctatgggttggagatcttgaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgagaacaaccatatgaccactctattgaaagacaagaacagccttgcagccta +catgaagaccttggacatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgccgccgcgcgttccttagttcatagggccaaggaggagct +ctctagcagaccaagaccggtcgttctgatgatctctggcaaaccagggataggaaagacccacttggccag +agaactggcaaagaaaattgcctcgacgctcacaggagatcagagagtgggcctcatcccacggaatggagt +tgaccactgggacgcctacaaaggtgagagagtggtgctctgggatgactacgggatgagcaaccccatcca +cgatgcgttgaggttgcaggaactggcagacacatgtccattaactttaaattgtgacaggattgaaaacaa +ggggaaagtcttcgatagcgacgcgatcataattaccaccaatttggtcaatcccgcgccgctggattacgt +caactttgaggcctg-ctccagacgtatagacttccttgtgtatgctgatgccccagaagtcgagaaggcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgctctgacttctcacacattaaactac +aacttgcaccacagggtgggtttgacaaaaatggaaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcacgtgcctctggtctcttgcacgagagattagatgagtacgagctacagggtc +cgcccctctcaaccttcaactttgaccgcaacaaaattgcagcgttcaggcaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ctatcaagaacatcataatcagaaagtgccagatagtctacggtggtaacacttacacgcttgagtctgacg +gcaagggtaaggttgtggttgagagggtgcagagcgccagcgtgcaaatcaacaatgagatcgctggtgcag +tacaccaccttagatgtgccaggataaggtattatgtcaagtgtgtccaagaggccatctactcactcctcc +aaatcgccggcacggtgtttgtcacttcacgcatcataagccgcatga------acatccaaaatttatggt +ccaggccactaaccgaagatgcagatga--------ggccactatgaaagaggggtgccccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaggccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacagcattctcaagcaaaggtctcagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgttaccgggtctgaga +tcagaaagaggaacccagatgacttcaaaccaaaaggaaagctgtgggccgacgatgataggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagtatatggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaggccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctgagattcccaaaacccatc +aggacagatgtgtcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagagctgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatcttggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaaggggcaacgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacagggtagtgagggtgaggccacgctcgagggtggcgac +aacaaaggaacatactgtggggcgccaatcctaggtcccgggaatgccccaaaactgagcaccaaaaccaaa +ttctggaggtcctccacaacaccacttccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtgggccatctctgcaacaagttatgcgagaccaactgaagccattcaccgaaccccgtggt +aagccaccaaaaccaagtgtcctcgaagccgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgcacaagcgtgcgcgtctcttgacaaaactacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgaattggtcaaa +actgagaaagtgtatgggaatataaagaagaggttgctttggggctctgacctggctaccatggtgcggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccactgtgtgacacttccgataagggttggcatg +aatatgaatgaagatggaccaatagtctttgagaagcactccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgttctggccgcggccatggagattatgg-ttaaattctcag +cagagccacaact-agcccaaatagtcgcagaggatctattgtcgcctagcgtagttgacgtgggcgacttc +aaaatttccatcaacgaaggattgccatcgggtgtcccttgcacctctcaatggaattccatcgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttttatggtgatgatgaaattgtgagcacagatatcaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccactcgtccagacaaaactgaaggccccctgatcattagtgaggatctgaat +ggcctaactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttcc +atacttaggcaattgtattggaccaaaggccccaatcatgaagatccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattctacagcaagatc +agcaagcttgtgatatctgagttgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccggtcaccggtcaaacaaacattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgtaaggactttggaacctgttttattaccactccctgatgttagaaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggagtctaaaacaaaaccatttaccctcccaatcctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgaccgcccat--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcatc----------------------------------tatataat----------------- +----------------gtcaccatcacaaacttgaatgggtccccctttgacccctccgaggacatccctgc +ccctctgggcgtacctgactttcagggaagggtttttggtgtcatctcccaaa---gagataa--------- +-----ac-----acaattcccctggacataatg----aaccagc----aaatagggggcacgacgctgtggt +ccctacttacacatcacagtacactccaaaattgggtcagattcaaattggca---------catggcaaac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactcaatgacactga------------------acattttaaccaatgggtggtccccag +atatgctggtgct-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgctcttttttagatcatacatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcagcatttctatcaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgtgcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcctgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacatcttactctggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtgaggc----------------aggccgattt--------------------------------------- +------------------------------ccagcacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcctcctttgctactcagtcttcaaggccaactctg +actacaaccactgggt-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +cacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctatatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggaa---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acct------------------------------------------------ +------------------------------------------------------------------------ +- +>LC209470.1/1-7515 |Norovirus Hu/GII/JP/2014/GII.P16_GII.2/Hiroshima-30 RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgctcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagaaatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagtt +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggggtccctatcaaacagattcaagttcacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctttcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatgaattgatt---------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209471.1/1-7514 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Hiroshima-26 RNA, nearly complete genome +---------------------cgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaaaactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttggggttcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacacctctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +gtctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgagaataa +gggaaaagtctttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagaagtagaaaaggcta +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggttaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaacgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttctttagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcaggtacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgtaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaagcgctggattggaacggc +acaaggtattgggcgccaggctctatgaggaccacatcttattctggaaagttcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cgcagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---ac-------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209472.1/1-7524 |Norovirus Hu/GII/JP/2010/GII.P2_GII.2/Hiroshima-18 RNA, nearly complete genome +-------------------ggcgtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggagccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggtt +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacggaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggtaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacatacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggacataatg----aaccagc----aaatagaggacacgatgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggactggaatggc +acaaggtattgggcaccaggctccatgagaaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaactctg +acaacaaccactggat-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacttctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209473.1/1-7522 |Norovirus Hu/GII/JP/2010/GII.P2_GII.2/Hiroshima-19 RNA, nearly complete genome +---------------------cgtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggtt +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacggaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggtaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaatgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacatcgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagagccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggacataatg----aaccagc----aaatagaggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgctccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggatgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataagtcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggccataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaattctg +acaacaaccactggat-----cctcacatgg------cacagccttatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tctt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209474.1/1-7521 |Norovirus Hu/GII/JP/2010/GII.P2_GII.2/Hiroshima-17 RNA, nearly complete genome +----------------------gtctaac-gacgcttctgctgccgctgctgca------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gaatgcttaacaacat +ggccgtcactcttaaacgag----ccctcggggcccggcccaaacagccg-gccccaagggaaaaaccccca +aga---------------------ccccctagaccaccaacaccagaactaatc-------aaaagaatccc +ccc-----------------------------cccaccacccaatga------tggggacgaaccaaccgtg +atgtttagca----------ctgt---aggtggtgtgtctggcctacctgagctcacaacagtcggccaacc +acctgaagctaacacggcctttagtgtgcctcccctcagtctaagggaaaacagggacgctaaggaaccgtt +gactggaactattctggaaatgtgggatggggaaatttatcattatggactgtatgtggaaagagggcttgt +gttaggcgtgcacaagccgccagctgccatcagcgtagccaaagtggaactgacgcccctctcactgtactg +gagacctgtgtacacgcctc---agtaccttatacctcctgacaccttgaggaaactccatggtgaattgtt +tccctatacagcctttgaaaacaactgttatgccttctgctgttgggttttggaccttaacgactcatggtt +aag---caggaggatgattagtaggaccactggctttttcaggccctaccaagagtggaacaggaagcccct +tccaactatggatgactcaaaattgaagaaggtcgcaaacatcgttctgtgtgcattgtcatcattgttcac +taggcccatcaaggatataattggcaaacttaaacccctcaacatcctaaacattctggcctcatgcgactg +gaccttcgctggcatagtagagtcactaatcctcttggctgaactcttt---gatgtattctggacaccccc +agatgtgtctgcaatgatcgcacccctcctcggtgactacgagctacaaggccccgaagacatcgctgtgga +gctcgtgcccgttgtgatgggtgggataggtctggtgttgggattcaccaaagagaaaataggcaagatgct +ctcctctgcagcatcaactctgagggcatgcaaagatcttggagcctacggattggagatcctaaaactagt +catgaaatggtttttcccaaagaaggatgaggccaacgaactggctatggttagagccattgaagacgctgt +attagacctggaggccattgaaaacaaccatatgaccactctgttgaaagacaagaacagccttgcagccta +catgaagaccttagatatggaagaggaaaaagctaggaagttatccaccaaatcagcctcccctgacattgt +gggcaccataaacgccctgctggctaggatcgctgccgcgcgttctttagttcatagggccaaggaggagct +ctccagcagaccaagaccggtcgttttgatgatctctggcaaaccagggataggaaagacccacttggccag +ggaactggcaaagaaaattgcctcgacactcacaggagaccaaagggtgggcctcattccacggaatggagt +cgaccactgggatgcctacaagggtgagagagtggtgctctgggatgattacgggatgagcaaccccatcca +cgatgcgctgaggttgcaggaactggcggatacatgtccattaactctgaattgtgacaggattgaaaacaa +agggaaggtttttgatagcgacgcgatcataatcaccaccaatttggtcaatcctgcgccgctggattatgt +caactttgaggcctg-ctccaggcgtatagacttccttgtgtatgctgatgccccagaagtcgagaaagcaa +agcgggacttccctggtcaaccggacatgtggaaggacgcctatcgttctgacttctcacacattaaactac +aacttgcaccacaaggtgggtttgacaaaaatggtaacaccccacatggtaaaggagtgatgaagactctca +ctgccagttcactggttgcgcgtgcctctggtctcttgcacgaaagattggatgagtacgagttacagggtc +cgtccctctcaaccttcaactttgaccgcaacaaaattgcagcgtttagacaactcgccgctgaaaataagt +atggtctggtggacacgatgagggtgggcaaccagctcagaaatgttacgaccatggatgaactcaagaagg +ccatcaagaacatcacaatcagaaagtgccagatagtctatggtggcaacacttacacgcttgagtctgacg +gcaagggtaaggttgtagttgagagggtgcagagcgtcagcgtgcaaatcaacaatgagatcgctggtgcag +tgcaccaccttagatgtgccaggataaggtattatgtcaagtgtgttcaagaggccatctactcacttctcc +aaatcgccggcacggtgtttgtcacttcacgcatcgtaagccgcatga------acatccaaaatttatggt +ccaggccattaactgaagatgcagatga--------ggccactatgaaagaggggtgtcccaaacctagg-- +-gaa----gaagagg---aatttgtcgtctcctcagatgacatcaagccagagggcaagaaaggtaaaaaca +agagtggccggggcaagaaacacacggcattctcaagcaaaggtcttagtgatgaggagtacgaagagtaca +aaaggatcagagaggagagaaatggtaagtactccatagaggaatacctacaggacagggacaaatac---t +atgaagaggtggccattgccagggcaactgaagaagacttctgtgaagaggaagaggttaagattcgtcaga +ggatcttcaggccaacaagaaaacaacgcaaggaagaaagagccaaccttggcctcgtcaccgggtctgaga +tcaggaagaggaatccagatgacttcaaaccaagaggaaagctgtgggccgacgatgacaggagcgtcgact +acaatgaaagaatcagctttgaggccccaccaagcatttggtctagaattgtcaactttggttctggatggg +ggttttgggtgtcac-ctagcctcttcataacatcaacacatgtcatacctcaaggcataactgaagccttt +ggtgtacctataaggcaggtgcaaatacacaaatcaggcgaattctgtcgcctaagattcccaaaacccatc +aggacagatgtatcaggtatgatactggaggagggagcgcctgaaggcactgttgccaccatactcatcaaa +agaaccactggagaactgatgcctctcgcagcaagaatgggcacccacgcgaccatgagaatacaaggacgc +acggtgggcggccagatgggaatgctgctcactgggtccaatgcaaagagcatggatctcggcaccacgccc +ggtgactgtgggtgtccctacatttacaaaagaggcaatgactacatagtcattggagttcacacagcagcc +gctcgtggcggaaacactgtcatctgcgccacacaaggaagtgagggtgaggccacgctcgagggtggtgac +aacaaaggaacatactgtggggcgccaatcctaggccccgggaatgccccaaagctgagcactaaaaccaaa +ttttggaggtcttccacaacaccactcccacccggcacatacgagccggcatatctgggaggaaaagacccc +cgagtcaaaggtggaccatctctgcaacaagttatgcgagaccaactgaagccatttaccgaaccccgtggt +aagccaccaaaaccaagtgttcttgaagctgctaaaaagacaattatcaatgtgctagagcaaacaatagac +cccccacaaaagtggacgtacgctcaagcgtgcgcgtctctcgacaaaaccacatctagtgggtacccccac +cacgtgcgcaaaaacgagcactggaatggggaatctttcacaggaaaattggctgaccaggcatcaaaagca +aacctaatgtttgaagaggggaagcacatgaccccagtttacacagctgcccttaaggatgagttggtcaaa +accgagaaagtatacggaaagataaagaagaggttgctttggggctctgaccttgccaccatggtacggtgc +gcgcgctcctttggcggtttgatggacgaactcaaggcccattgtgtgacacttccgataagggttggcatg +aacatgaatgaagatggaccaatagtctttgagaaacattccagatacaggtatcactatgatgcagattat +t-ccaggtgggattcaacacagcagagagccgtcctggccgcggccatggagattatgg-ttaaattctcag +cagaaccacaact-agcccaaatagttgcagaggatctattgtcgcctagtgtagttgacgtgggcgacttc +aaaatttccatcaatgaaggattaccatcgggtgtcccttgcacctctcaatggaattcaattgcacactgg +ctcctcaccttatgtgccctttctgaagttacagacctctctcctgacattgtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagatattaaattagacccagaaaagctgacggggaagttg +agagaatatggcctcaaacccacccgtccagacaaaactgagggccccctgatcattagcgaggatctgaat +ggcctgactttcctgaggagaaccgtcactcgcgaccctgcaggatggtttggcaaactggaccaaagttct +atacttaggcaattgtattggaccaaaggccccaatcatgaagacccctttgagtcaatgattccacactcc +cagagacccatacaactcatgtcactcttgggcgaagcagcactgcatgaaccatcattttacagcaagatc +agcaagcttgtgatatctgaactgaaagaaggtggaatggatttttacgtgcccaggcaagaacctatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccgattgaaaaccttagcccacagcaaattaccatgtttcctcatgt +gattatagatgtaaggactttggaacccgttttattaccactccctgatgttagaaataatttcttccacta +taatcagaaagatgat---cccaagatgagaatcgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgacgtattcacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaattctcacacttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggtaggtgcacactggatggggagctccaaggaacgacccaactccaggtcagtggcatttgtgcttt +taagg-----------------------------------------gagaagtaactgcccac--------- +-----------ttgcatga-----------------------------------------------ca---- +----atgatcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccccctgggcgtacctgactttcagggaagagtctttggtatcatctcccaaa---gagacaa--------- +-----gc-----acaattcccctggatataatg----aaccagc----aaatagaggacacgacgctgtggt +ccctacctacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgacgatct---cacagtcagccaaccagtaa---------------------------aattcaccccag- +--------ttggactcaatgatactga------------------acattttaaccaatgggtggttcctag +atatgctggtgct-ctaaat------cttaatacaaatcttgccccttctgttgcaccagtatttccagggg +agcgcctactctttttcagatcatatatccccc------tcaagggtggtta------tggaa--------- +--atccagccattgattgcctactaccacaagagtgggtgcaacatttctaccaggaagcagccccttcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaagctccacag +agctggtttcatgacagtttcaagcaacaccagtgccccggtggttgtgcctgccaacggatactttagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagctttcgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaga--- +------------------------------ttacagcaaaattctttcaatcatgacaaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggtcttgaccgctggc +ggcttttcccctgctgacgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggaccacatcttactccggaagatt------------------- +-----------------------cacatcaaccgcccc---------------------------------a +gtaaggc----------------aggccgattt--------------------------------------- +------------------------------ccaacacacccaaagccggcct---------------tcgag +tggctctt-----------ctgtg------------tcttcctttactactcagtcttcaaggccaactctg +acaacaaccactggat-----cctcacatgg------cacagcctcatc----------aaattcg------ +-------------------------------actcgcagcacaaacctctcccaatcaacggtctctagggc +tgcatc---------------------------------------tagaactggtgagtgggttagggatca +aaatagaaatttggaaccctatatgc---atggtgccctacagacagcttttgtcaccccgccttccagcag +ggcgtct---gac---------------------------------ggga---cggtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-att----------ta---------------------------t-ctaaaat--------gaattg +-------a-----tcct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209475.1/1-7516 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Ehime-9 RNA, nearly complete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggttttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacattgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagatttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggcaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgtcctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtgccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcaaatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggccagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattga-tttt---acctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>LC209476.1/1-7532 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Ehime-8 RNA, nearly complete genome +---------------------cgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +aggtgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataacaactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccacttttaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtata +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaaaacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaggaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgctgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaggctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatggaaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctattctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactacttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgttcaggcccccaatggtgaatttacagtctctcctcgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtcccctttcgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattgattttt---accttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>LC209477.1/1-7515 |Norovirus Hu/GII/JP/2013/GII.P16_GII.2/Ehime-6 RNA, nearly complete genome +----------------------gtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccact +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggttttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacattgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaatccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagagatgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcattatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagatttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttataaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaggggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtgccatgcacttcccagtggaactccatctcacactgg +ttactaaccctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcaaatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaagaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +a-aatggattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209478.1/1-7518 |Norovirus Hu/GII/JP/2012/GII.P16_GII.2/Ehime-46 RNA, nearly complete genome +---------------t---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcctccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgcgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaagttaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaggggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcctccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaactgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcaaggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccggatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggctcccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaggtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtagtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactaggggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +caatcaaaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcagccaaccagtca---------------------------agttcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcttgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcagttctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcgtttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctttcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagggatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>LC209479.1/1-7525 |Norovirus Hu/GII/JP/2011/GII.P16_GII.2/Ehime-45 RNA, nearly complete genome +------------agat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgcgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaagttaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +ggggaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcagacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgcccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaggtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagaaccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatat +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggccagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcttgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcagttctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----tctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggtgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209480.1/1-7533 |Norovirus Hu/GII/JP/2010/GII.P16_GII.2/Ehime-44 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gtcccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggagccgct +gacaggggcaatattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagacgtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcatcaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagaggaccacactaggactagtaactggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgaattttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtctccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaaggtaaacacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgaggggcccctgatcatcagtgaagatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcttcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttctttcacta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------cg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacacaatgg +ccct--------gggcaaaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctacttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcgctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggttctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgagacaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------ag--------at +tcaactcgc----aacacaagcctctcccaatcaacgatctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-tttt---acctttc--------------------------------------------- +------------------------------------------------------------------------ +- +>LC209481.1/1-7533 |Norovirus Hu/GII/JP/2010/GII.P16_GII.2/Ehime-43 RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatgt +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gtcccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagtcatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggagccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattagt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggcgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtcccctcaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaggcaccagacgtagaaaaggcaa +aacgagactttcctggacaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcatcaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgacctcgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagaggaccacactaggactagtaactggttcagaaa +tcagaaaaaggaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagtatatggtctaggattgtgaattttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtctccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctgatgtttgaggaaggtaaacacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagttcgagttggcatg +aacatgaatgaagatggtccaataatatttgagaggcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaactgaggggcccctgatcatcagtgaagatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcttcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttctttcacta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ctctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------cg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtatcatctcccaaa---gagacaaacacaatgg +ccct--------gggcaaaatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgccccagtatttccagggg +agcgcctacttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcagatacattaacccggatactggtcgggcgctgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgatcgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggttctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------ag--------at +tcaactcgc----aacacaagcctctcccaatcaacgatctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagacca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------tgcctag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tgttta +g-aataaattga-ttct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY421039.1/1-7519 |Norovirus GII strain Hu/GII.Pe_GII.4/Sydney Variant 2015 nonstructrual polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-gctgtcactattaagcggg----ccctcggggcgcggcctaagcagccg-cccccgaaggagacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaagccaacacggcgttcagtgtccccccactcaaccaaagggagagcagagacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattctaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggccacatgtgactg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactacaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +atcatccgctgcatccactttaagagcttgtaaggaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgactttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacctgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctctagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccctctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccacgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atggactgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaagattgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctttggt +ccaagccacaggtggaagacacagaaga--------gataaccaacaaagatggttgcctaaaacccaag-- +-gat----gacgaag---agtttgtcgtctcatctgatgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaagaaaacaacgcaaagaggagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatttggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcagatccagatacacaaatcaggtgaattctgccggttgagactcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcatccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tcaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaagctggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgataaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgacccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgagacaatgataccacactcc +caaagacccgtacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaagatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggacctgatctaaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacactccactcagagctaacaatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttcccaattcctttggaaaggctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaataccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagctcccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagtgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggcccacactggccaacatgacttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaggttgagttcgaaaacaatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccag +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacggatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctagggctacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctacta-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgttt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +aatctcttttaaaaaaaaaaaacaaag--------------------------------------------- +- +>MG214988.1/1-7513 |Norovirus GII strain Hu/GII.4/Jinan/JN010/2017/CHN, partial genome +----gtgaatgaaaat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtaccttatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatcctcaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacccgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttgacaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggtacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggagaccagcgtgtgggccttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagactatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgacgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccgattgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggctacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggctgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggctacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctatggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcattatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtgggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaggctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +cagagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacttgtctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccatg----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggagcaactacgacccaacagaagaaatcccagc +ccctctagggactccagactttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgcaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG002630.1/1-7539 |Norovirus GII strain Hu/GII.P16_GII.4_Sydney2012/BNE1/2017/AU polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaaacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgtcccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgctctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggtaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccactcgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaatagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatatacggtggctccacgtattaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccgggaccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagagacccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggatatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +aaaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaggaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaaggaaggaagagagggccacattagggctagtgacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgctggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcgtcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggtcatatgcgcaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagatcaagcatcaaaagca +aacctgatgtttgaggaagggaaacatatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcataacactcccagtacgcgttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtaccgtgcacttcccaatggaactccatcgcacactgg +ctgttaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatctgaac +ggactcactttcctccgaaggacggtgactcgcgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctctccacggaccctctttctacagtaaaatc +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagctcctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggaataactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----ct-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaacctcaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccaggtg +agcaacttctcttctttagatccaccatgccc------ggatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgctcccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaaccttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtacgcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttt-tct----------tt-------------ttctt- +-------------tagt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MG002631.1/1-7522 |Norovirus GII strain Hu/GII.P16_GII.4_Sydney2012/BNE2/2017/AU polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccgcctaatggcgaagaaggagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggtctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatagatgactccaaaattaaaaaggtagcaaacatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +cgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtggttgttatgatatctggcaaaccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctctccgcatacaagagttggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattacgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccagggtc +ccacaatcaccaccttcaacttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacagtt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaacgaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgataacagaagtgttgact +acaatgagaaactggactttgaggctcctccaagcatatggtccaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatctactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgatttagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggtggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggtcctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcaacaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatatgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactagcaaattggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacagatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggacctgctagcccccagtgtagtagatgtgggagacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacattgg +ctgctaactctatgtgctttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagctaaccgctaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtaaagatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttgggaaactggatcaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggcgaagcctctcttcacggaccctctttttacagtaaaatt +agcaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagattat +atttgcagcagtcccaccaaattttccaaccgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---tccactattaagttgatagcaatgttatatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgagaccatcccccgactttgatttcatattctt +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacacg----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatccctgc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaggccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcacccacctttccgggtg +aacagcttctcttctttagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtacagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcacaa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaggtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctagactggagcggg +acaaggtattgggctcccgatgctaggactacaacacacaatgcaggccgcttttccaccctt--------- +ca---------------------atcatcggggacatt---------------------------------g +ccaggaa----------------gaattaatcttaggg--------------atgc---------------- +------------------------------cgttcctgctcggggacccccc------------------ag +taaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----c------ctttc----------t-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MG002632.1/1-7550 |Norovirus GII strain Hu/GII.P4_New_Orleans2009_GII.4_Sydney2012/BNE3/2017/AU polyprotein, major capsid protein, and minor structural protein genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaggatatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattttggaaatgtgggacggggaaatctaccattatggcctgtatgtggaacgaggtcttgt +gctaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataataactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaagaatgatccagagaacaactggtttctttaggccctatcaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtaga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgaactggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccagaaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaagaggagct +ttccagcagaccaagacctgtggtgttgatgatatctggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgagcatcagggctgctccatgagagactggatgaatttgagctgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaaaaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaggttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagagaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctctc-ccagtttgttcataacatcaacacatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagatttcctaaaccaatc +aggactgatgtaacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttggaagctgccaagaagaccatcattaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacgggcaagctggcagaccaagcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +ctcctcaccctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctgaat +ggtctgactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcacccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +taaccaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctatcccagttttaacagttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagcgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtaaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgatccaacagaagaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacagt +gtacactgggagcgccgactttgctcctaaactgggtagagttcaatttgaaa---------ctgacacaag +caatgattt---tgaagctagccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccactgtggcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctactccctcaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagctccataa +agcaggctatgtcacagtggctcacactggccaacacgatttggtcatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +accaggtactgggctcccgatgctagaactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcaccaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatcat-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacggggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>MG002633.1/1-7538 |Norovirus GII strain Hu/GII.P16_GII.4_Sydney2012/BNE4/2017/AU polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +------------------------------gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccaatcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggttaacacagcattcagcgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactacggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtagagctgacgccgctgtcattgtactg +gcgtgtagtgtacactccac---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaatcaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaatcaaaccattaaacgtattaaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtgcctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccgaagaaagaggaggccaatgagctagccatggtgagagccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccagatcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggaaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggaccaaagagtcggactcataccaagaaacggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagagttggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggaggattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctac +agcttgcaccacagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcatcaggcctactgcacgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaacttcgaccggaatagaatcacagcatttagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccattaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgaattggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcagggaagaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaagatccgtcaga +gaattttccgtcccaccaggaaacaacgaaaggaagagaggaccacattagggctagtaacgggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaggctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccctccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgtttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtctccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagctagaatgggaactcacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttaggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgaaggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagatcagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagacctttactagtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctagcccccagcgtagtagatgtgggagacttt +aaaataacaataaatgaagggctcccctctggtgtgccatgtacttctcaatggaactccatcgcacattgg +ctgctaactctatgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaactggaccctgaacagctaactgctaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacgatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttttacagtaaaatc +agcaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcgtgccgagttctcacgagaccatcccccgactttgatttcatattctt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggaaggtgcacaactgatggcgtgcttctaggcaccacacaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacacg----------------- +----------------atgaatttggcttcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaacg--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacacc------cataatgtacatctggcccccgctgtagctcccacttttccgggtg +aacaacttctcttctttagatctaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagagttttgtttgaatgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttcccttatcaatgctgg---ggctggggctattaatcaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatcctttcaatttagtagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgagggttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctctagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttaggg--------------atgt---------------- +------------------------------tgttcccgctcggggacccccc------------------ag +taaatctt-----------ctaat------------tcttctactgccacctctg----------------- +-------------tgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtttcgagcctcccgt------------------c +gactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aat-tgat-----ta-----t------ctttcttttt----at-tt-------------ttctt- +-------------tagt---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>MG002634.1/1-7555 |Norovirus GII strain Hu/GII.P4_New_Orleans2009_GII.4_Sydney2012/BNE5/2017/AU polyprotein, major capsid protein, and minor structural protein genes, complete cds +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaggatatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattttggaaatgtgggacggggaaatctaccattatggcctgtatgtggaacgaggtcttgt +gctaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataataactgctatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaagaatgatccagagaacaactggtttctttaggccctatcaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgactg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtaga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgaactggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccagaaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaagaggagct +ttccagcagaccaagacctgtggtgttgatgatatctggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgagcatcagggctgctccatgagaggctggatgaatttgagctgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaaaaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaggttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------atatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagagaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctctc-ccagtttgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagatttcctaaaccaatc +aggactgatgtaacgggcatggtcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggtccagggagcgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacgggcaagctggcagaccaagcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcggaagaccttctttcccccagcgtggtggacgtgggcgatttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +ctcctcaccctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctccgaagacctgaat +ggtctgactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcacccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +taaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctatcccagttttaacagttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagcgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtaaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgatccaacagaagaaatcccagc +ccctctaggaaccccagactttgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaggctacagt +gtacactgggagcgccgactttgctcctaaactgggtagagttcaatttgaaa---------ctgacacaag +caatgattt---tgaagctagccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtggcccccactttcccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctactccctcaggaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtaaatccagacacaggtagggttttgtttgagtgcaagctccataa +agcaggctatgtcacagtggctcacactggccaacacgatttggtcatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +accaggtactgggctcccgatgctagaattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcaccaggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatcat-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacggggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY210920.3/1-7506 |Norovirus GII isolate Hu/GII.P16-GII.13/RUS/Novosibirsk/NS16-A397/2016, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacagc +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---tgaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gaatggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggaaaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgctgtcattgtattg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggcggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattatccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgccgttga +gctcgtgcctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggtttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaagtctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaactggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctaatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgacg +gcaagggcaaagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------attagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctagggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatggaaagtactctatagaggagtaccttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcagc +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggacttcgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgagttttgccggtttagattcccaaaaccaatt +aggtcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactacatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgaacctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccctac +cacgtccgaaagaatgaattctggaatggtgagaccttcactgaaaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaaa +actgacaaaatctatggaaagattaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctactggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggatcctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtggaatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---cgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtagcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtgtcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctatcaaggatgtacaa +tggatatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagtccagctcaaattactatgctcccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtcttcactgtgtcttgtagagtgttaactaggccaacccctgactttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatgggaggtgcaccttggatggagagcttcagggcaccacccagctgctgtcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------accatgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttgacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaaaattcaccccaaaaattgggtcaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcagtcac---------------------------ggttcacccccg- +--------ttggagttgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcacgtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgttccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtatcacacactggtgcctaccctcttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaatcaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaactgaattttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccaaattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagcc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------cccag------------cggactgcagctccaagca----------------- +----gtatccgcagca-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacagcctcc----------------t------------------c +tagttc---------------------------------------gagaacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---aaggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcctcc---agca------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------tcaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------ctttta +a--atgtgattttattt---tccttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>KY210980.3/1-7577 |Norovirus GII, complete genome +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagaggcgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aataggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacggtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgtt +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aataccttatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgttatgccttttgctgttgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacacttagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacagaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaggaattggctgatacgtgtccccttaccttaaattgtgacagaattgagaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattgatggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgcggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggaaatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggttagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactagactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaagcattt +ggagtccccattaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacaaatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcatactgcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccaattgaagccattcactgaacccaggggc +aaacctccaaggccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtacgagtcggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtaactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacctgatgtcaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctttaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagaacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccaa- +--------tcggtgtcatccaagatggtagcaccacccaccggaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcagtctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>MG049692.1/1-7509 |Norovirus GII isolate YJB1, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggcgtgcacaaaccaccggctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +acaggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaaaggggagagggtcgtcctatgggacgactatggtatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgtcatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgtacagaccaacaatgagctggttggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacctgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgcgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggaatccacatggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggaggtcgtccacagtaccgctcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaaggggagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagggccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcgctctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaggacccatctgaatcgatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgcaattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctagtggagagttcacagtatcccctagaaacgctccagg +cgaaatactgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccctagccaggttaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcctaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctgaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaggcagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ccgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccatcgaaatgaaccccaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgatccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcttcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcactccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140633.1/1-7539 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E7800007_p1_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------aac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----atcgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggccgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatgtccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctatcactatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---aatacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcactattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttccccaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +cctggatctcgaagcaattgagaacaaccatatgactaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagctaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacgatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtccccttaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttaatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtatatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgagggttgacagagttcaaagtgcctccgtacagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccttgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaagatatagagga--------gactgccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggactcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacagcgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaagtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +agatccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggtgtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaacaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggaccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttaccaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaagttggacccagaaaagttgacagcaaagctc +agggagtatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagaattca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaagtc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaactgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgacgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccgatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgacgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtaatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------ggtgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgcat---------tataatggctggagctttctttgctgggttggcatctgacgttcttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaagttg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------acccccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>MF140634.1/1-7531 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E1300272_p1_d566 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----accgacaccgtaaaatcttcaagcgacg---------------gagtgctttctagcat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacggccacccactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctatcactatggcctgtatgtagagcgaggttttgt +gttaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatacccccc---aatacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgacaccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcactattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttccccaagaaagaggaagcaaatgaattggctattgtgagatccatcgaggatgcagt +cctggatctcgaggcaattgagaacaaccatatgactaccttgctcaaagacaaagacagtcttgcaaccta +catgagaacccttgaccttgaggaggagaaagctaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacgatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaataggaaagacccaccttgccag +ggaagtggctaagagaatcgcaacctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagggtcgttctatgggacgactatggaatgagcaatcccatcca +cgatgccctcagattgcaagaactcgctgacacttgtccccttaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaaaaatatttcaatcaagaagtgccagatagtatatagtggtagcacctacacacttgagtctgatg +gcaaaggcaatgtgaaggttgacaaagttcaaagtgcctccgtacagaccaacaatgagctgggtggcgccc +tacaccatctaaggtgcgccagaataagatattatgtcaagtgtgtccaggaagccttgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaagatacagagga--------gactgccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaaaaagcacacagccttctcaagcaaaggactcagtgatgaagagtacgatgagtaca +agaggattagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacagcgcaaggaggaaagagcttccctcggtttagtcacaggctctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaaatgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaagtacataagtcaggcgaattttgtcgcttgagattcccaagaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +agatccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgt +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggtctgagggagaggctacacttgaaggtggtgac +aataaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggaacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggaccttcactgcagcaggtcatgagagatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcggaaaaacgactgctggaatggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcacttaaggatgaattggttaaa +actgacaaaatttatggcaagatcaagaagagacttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttaccaacttgtcacctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgtcagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggagtatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggaatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctatcacta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgacgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccgatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------gctacaca----------------- +----------------atgaatttggctactcaaaattggaatagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +atccactgggagcgccgactttgctccaaaattgggtagagttcaattcaaca---------ctgacacaaa +caatgattt---tgacactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggagtcatccaggatggtggca---cccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cacaatgtgcacctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------ggtccagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggtcttatttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggtcaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgttcttggctccggactt +ggttctctgatcaatgccgg---ggctggggtcatcaaccaaaaagttgactttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacagtcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaaactttggactggagtggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------acccccgggggcact---------------------------------g +ccaggga----------------gatcta------gggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacacctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggtggaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140635.1/1-7532 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E7800016_p1_d716 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----accgacaccgcaaaatcttcaagcgacg---------------gagtgctttctagcat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacggccacccactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacagccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctatcactatggcctgtatgtagagcgaggttttgt +gttaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacccgtatatacccccc---aatacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgacaccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcactattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttccccaagaaagaggaagcaaatgaattggctattgtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgagaacaaccatatgactaccttgctcaaagacaaagacagtcttgcaaccta +catgagaacccttgaccttgaggaggagaaagctaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacgatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaataggaaagacccaccttgccag +ggaagtggctaagagaatcgcaacctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaaaggagagagggtcgttctatgggacgactatggaatgagcaatcccatcca +cgatgccctcagattgcaagaactcgctgacacttgtccccttaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgagcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaaaaatatttcaatcaagaagtgccagatagtatatagtggtagcacctacacacttgagtctgatg +gcaaaggcaatgtgaaggttgacaaagttcaaagtgcctccgtacagaccaacaatgagctgggtggcgccc +tacaccatctaaggtgcgccagaataagatattatgtcaagtgtgtccaggaagccttgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaagatacagagga--------gactgccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggactcagtgatgaagagtacgatgagtaca +agaggattagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacagcgcaaggaggaaagagcttccctcggtttagtcacaggctctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaaatgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaagtacataagtcaggcgaattttgccgcctgagattcccaagaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +agatccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgt +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggtctgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggaccttcactgcagcaggttatgagagatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattggttaaa +actgacaaaatttatggcaagatcaagaagagacttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttaccaacttgtcacctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgtcagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggagtatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggaatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacccgtgttgatccccttacccgatgttaggaataacttctatcacta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgacgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccgatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tctcagg------------------------------------------------ta---- +-------ctcaca----------------------------------gatacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +atccactgggagcgccgactttgctccaaaattgggtagagttcaatttgaca---------ctgacacaag +caatgattt---tgacactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggagtcatccaggatggtggca---cccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-agtact------aacaatgtgcacctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------ggtccagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgacgttctcagttccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaacaattgactttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaagactttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------gtccccgggggcact---------------------------------g +ccaggaa----------------gggcta------gggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------aa +cacatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140636.1/1-7334 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E7800008_p10_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------cacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---gtggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140637.1/1-7497 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E1300285_p10_d316 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +---------------------cgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacaatg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagctttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggctgagacctgtcgttgtgatgatatcgggaaagccagggatagggaaaactcactttgccag +ggaggtggccaacaaggtcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcacacatgaaactgt +cattggctccacaaggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaactacaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatagtcaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctctc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaggccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggatgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtgccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaaatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacagacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaagtactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcggtcccaccaaattttccaactgaatgtttgagccccagccaggtcactatgctcccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgctcgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaga----------- +-----------tcacagg------------------------------------------------ta---- +-------gtagta----------------------------------cctacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagttggctcaaca--------cgc-----------ggccacaaagccacagt +gcgcactgggagcgccgactttgctccaaaactgggtagagttcgatttgaaa---------ctgacacaaa +caatgattt---tgaagttaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtgacaccgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtacatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------cataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagtcaaacaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +aaagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---gtggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgt---------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140638.1/1-7496 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.Pe-GII.4/Rotterdam/E1300286_p10_d362 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------ctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacaatg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaagacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagctttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggctgagacctgtcgttgtgatgatatcgggaaagccagggatagggaaaactcactttgccag +ggaggtggccaacaaggtcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcacacatgaaactgt +cattggctccacaaggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaactacaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatagtcaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctctc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaggccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggatgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtgccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaaatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacagacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatcactgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaagtactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcggtcccaccaaattttccaactgaatgtttgagccccagccaggtcactatgctcccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgctcgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaga----------- +-----------tcacagg------------------------------------------------ta---- +-------gtagta----------------------------------cctacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagttggctcaaca--------cgc-----------ggccacaaagccacagt +gcgcactgggagcgccgactttgctccaaaactgggtagagttcgatttgaaa---------ctgacacaaa +caatgattt---tgaagttaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtgacaccgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtacatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------cataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagtcaaacaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +aaagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---gtggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140639.1/1-7468 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.Pe-GII.4/Rotterdam/E1300287_p10_d462 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +------------------------------------------------gttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttctctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------gggggatgaactagtggtc +tcctacaatg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgctgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagctttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatact +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttctttccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagataaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggctgagacctgtcgtagtgatgatatcgggaaagccagggatagggaaaactcactttgccag +ggaggtggccaacaaggtcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggcgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcacacatgaaactgt +cattggctccacaaggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttacttcatgagaggctagatgaatatgaactacaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatagtcaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agaggatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaattttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctctc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaggccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggatgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtgccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaaatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatacagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacaaacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccaccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagtcagcctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctatctgtcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagttctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcggtcccaccaaattttccaactgaatgtttgagccccagccaggtcactatgctcccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtacctttgttgtccaaccaca +aaacggtaggtgctcgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaga----------- +-----------tcacagg------------------------------------------------ta---- +-------gtagta----------------------------------cctacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagttggctcaaca--------cgc-----------ggccacaaagccacagt +gcgcactgggagcgccgactttgctccaaaactgggtagagttcgatttgaaa---------ctgacacaaa +caatgattt---tgaagttaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtgacaccgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtacatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatattacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------cataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagtcaaacaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +aaagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccga------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---gtggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140640.1/1-7487 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.Pe-GII.4/Rotterdam/E7800017_p10_d508 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggctgagacctgtcgtagtgatgatatcgggaaagccagggatagggaaaactcactttgccag +ggaggtggccaacaaggtcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggcgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctctc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctattaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaatccaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggatgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtgccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgaccaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatccgatcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagtcaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgctcgactgatggcgtgctcctaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaga----------- +-----------tcacagg------------------------------------------------ta---- +-------gtagta----------------------------------cctacaca----------------- +----------------atgaatttggcttctcaaaattggagcaactatgacccaacagaagaaattccagc +ccctctgggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagttggctcaaca--------cgc-----------ggccacaaagccacagt +gcgcactgggagcgccgactttactccaaaactgggtagagttcgatttgaaa---------ctgacacaaa +caatgattt---tgaagttaaccaaaatacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtgacaccgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtacacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagtcaaacaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---gtggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140641.1/1-7527 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E7800009_p11_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------ctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgataacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacgactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaaaaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggccttatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcagactgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccgacaaggaaacaacgcaaggaggaaagagtctctctcggcttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattatgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagggtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtatacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtcccctgataccatacaggccaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaaactacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaagagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaatcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140642.1/1-7283 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300306_p11_d83 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------cacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgataacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacgactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaaaaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccgccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggccttatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcagactgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccgacaaggaaacaacgcaaggaggaaagagtctctctcggcttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattatgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtatacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagggtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggattccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcttaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtatacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaatctgtcccctgataccatacaggccaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcaaatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaagagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaac------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140643.1/1-7442 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300307_p11_d195 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------------------------------------------------------ +-----------------------------cttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgataacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacgactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaaaaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggaactgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggaaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcagttgaaagcaatcatttgaccgccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggccttatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcagactgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccgacaaggaaacaacgcaaggaggaaagagtctctctcggcttggtcacaggctctgaaa +ttaggaaaaggaacccagatgacttcagacccaaagggaaattatgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtatacaagtcaggcgagttctgtcgcttgagattccccaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagggtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactatcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggattccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcttaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtatacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaatctgtcccctgataccatacaggccaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaaaacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggtccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttcttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +caaag-----------------------------------------ggggtgtcgtccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttactccaaaactgggcagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaagagctttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctattt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtagtcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140644.1/1-7520 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.P4-GII.4/Rotterdam/E7800018_p11_d413 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctcac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccaccccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctccccagacactctcaagagattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacgactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaaaaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +actcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcgtccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaaaaaggaggaggcaaatgagctggctatggtgaggtccatcgaggatgcagt +tctggatctcgaggcaattgaaaacaatcatttgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcagactgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcctgatgtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgacttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactgcagggtc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttaggcagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccagagcgccgccgtgcagaccaacaatgagctggctggcgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcctcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacggatgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacggcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccgacaaggaaacaacgcaaggaggaaagagtctctctcggcttggtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaaacccaaggggaaattatgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtatacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtctcactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagggtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagactaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagaccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcttaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaatctgtcccctgataccatacaggccaattctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgccctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccctacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatatttct +agtgccacccacagttgagtctagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttattgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +caaag-----------------------------------------ggagtgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcatc----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +tcctctaggagctccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggtcgaatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagtgcagactttactccaaaactgggcagaattcaatttgaaa---------ctgacacaaa +caatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtaacaccacccaccgaaatgaaccccaacagtggaagctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttctttagatccaccatgcccg------gatgtagcgggta------cccca--------- +--atatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccctatgacaagagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagccaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcccttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcacaggcagcctctcttcgctt +acattcgtagtcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140645.1/1-7515 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.7/Rotterdam/E1300273_p12_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------taac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtgacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagattgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgaaccact +tcctggcacaatattagagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggagtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaaaggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaagaaagtggccaatgcaatcctctgtgcactcggctcactgttctc +aagaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtgtagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctatgga +gctcgtccccgtggtcatgggcggcgtagggatggttctcggttttaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaggatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatatcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcgacactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaagacaatgcatcccagactgtaaacgaggtacaatccgcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctatactctcatgc +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccggccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacccgtgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaag +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttctcacaggagcgaacgcgaagaacatggacctcggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagactaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagggaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcgtgtgcctcattggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaaaataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggaacattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttatggggacgatgagatcgtcagtactgacatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttataagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtagctggtgcatcgctggcgacaccagttgtcgggcaacaaaatgtaattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgctcgatttggagttgggaccagaactaaacccctatctctctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttagctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaacttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaactagaaccagttctattacctatgccagatattagaaacaacttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacactgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gaggtcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagatacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggagaccaatacgcccccaaattggcccaagtgaaact---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acccct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacctggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcta------tgaat--------- +--cgggttacatggactgccttgtcccccaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggccagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgca +ggattctctcctacggatgccgcgaggggttctgtcggcgcaccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaacctcctaaag----------------------------------- +----------------------------------------tagatccccctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcgactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------ccatttaaccctgt---------caaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcgtca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgctcttcttttc------ca-ctattcct---ttaat----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140646.1/1-7439 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.7/Rotterdam/E1300274_p12_d26 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +----------------------------c-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtgataacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagattgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgaaccact +tcctggcacaatattagagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggagtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaaaggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaagaaagtggccaatgcaatcctctgtgcactcggctcactgttctc +aagaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtgtagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctatgga +gctcgtccccgtggtcatgggcggcgtagggatggttctcggttttaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaggatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatatcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcgacactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaagacaatgcatcccagactgtaaacgaggtacaatccgcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctatactctcatgc +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccggccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacccgtgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgctggaggaaggcgccccagaaggcactgtctgttctatactcataaag +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttctcacaggagcgaacgcgaagaacatggacctcggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagactaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagggaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcgtgtgcctcattggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaaaataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggaacattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttatggggacgatgagatcgtcagtactgacatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttataagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtagctggtgcatcgctggcgacaccagttgtcgggcaacaaaatgtaattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgctcgatttggagttgggaccagaactaaacccctatctctctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttagctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaacttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaactagaaccagttctattacctatgccagatattagaaacaacttcttccatta +caatcagggcaatgac---ccaaaattgagattggtagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttcacactgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gaggtcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagatacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggagaccaatacgcccccaaattggcccaagtgaaact---ct---------tctcagagtc +ccaggattt---cgatgtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acccct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacctggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcta------tgaat--------- +--cgggttacatggactgccttgtcccccaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggccagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgca +ggattctctcctacggatgccgcgaggggttctgtcggcgcaccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaacctcctaaag----------------------------------- +----------------------------------------tagatccccctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcgactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------ccatttaaccctgt---------caaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcgtca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgagggg------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140647.1/1-7525 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.7/Rotterdam/E1300275_p12_d54 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------taac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtgacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaaggttgggtctaaaacattaacaatccc +ccc-----------------------------tgagcccccgaatgg------tgaagac------accgta +cagtttaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgaaccact +tcctggcacaatattagagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggagtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaaaggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaagaaagtggccaatgcaatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagacctgttaggcaaactcaagccattgaatctactacacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggctatgga +gctcgtccccgtggtcatgggcggcgtagggatggttctcggttttaccgccgagaagataggccgcatgct +atcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaggatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcagcaggatcaggccagtggttgttatgatatcaggcaggcctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttcccaggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcgacactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttgaagacaatgcatcccagactgtaaacgaggtacaatccgcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctatactctcatgc +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccggccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctgtgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttctcacaggagcgaacgcgaagaacatggacctcggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gccagaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagactaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagggaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcgtgtgcctcattggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaaaataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggaacattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttatggggacgatgagatcgtcagtactgacatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttataagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtagctggtgcatcgctggcgacaccagttgccgggcaacataatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgctcgatttggagttgggaccagaactaaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttagctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaacttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctattacctatgccagatattagaaacaacttcttccatta +caatcagggcaatgac---ccaaaattgagattgatagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattttt +ggtcccccctacggttgaatctaaaaccaaacagttctcactgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctactaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gagttcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagatacacctgg +tcccattggttcacctgactttcaaggtgtactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----cccccccacg--------aga-----------gcccatgaagccaacat +taacactggtggagaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acccct---------cccatcctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacctggctccagcagtggcccccctattcccaggtg +agcagatcctattctttagatcacaaataccca------gctcaggcggcta------tgaat--------- +--cgggtaacatggactgccttgtcccccaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggccagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcgcaccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcaggaacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaatctcctaaag----------------------------------- +----------------------------------------tagatccccctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------ttaaaacaca---atcgactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------ccatttaaccctgt---------caaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatga---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcgtca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgctcttcttttc------ca-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>MF140648.1/1-7525 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.7/Rotterdam/E1300276_p12_d76 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +---------------------cgtctaac-gacgctactgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtgacaacgccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgttcccaagggcacc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaaggttgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagttcaatg----------caaagtcagaaactatagttgggttgccggacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacaggccggccaccgaaccact +tcctggcacaatattagagatgtgggatggtgagttttaccattattccgtgtacgtcagcgacggcagagc +tctgggagtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaaaggtctcgctggtgagaagtt +cccctatacggccttcagtaacaactgttataacttctgttgctgggtgcttgagctcaacgacacgtggct +taa---cagaagatgcatttccagaaccaccggcttcttcaagccataccagtcttggaacagaaaacctct +cccaaccgttgatgatggaaagattaagaaagtggccaatgcaatcctctgtgcactcggctcactgttctc +aaaaccaatcaaagacctgttaggcaaactcaagccattgaatctactgcacttgcttgcgtcttgtgattg +gacgtttgcgggtatagtggagacagtcatcttgatggcggagcttttc---aatgtcttctggaccccccc +agatgtctctaattttatagcctccctaataggtgattttgaattgcaagggcctgaggacctggccatgga +gctcgtccccgtggtcatgggcggcatagggatggttctcggttttaccgccgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccgaagaaggaagagaaagctgagatggaaaccttgagggcgattgaggatgccgt +cctggatatggaagccatagggaacaaccacctcacaacccttcttaaggacaaagatagcctcacggcttt +catgaagaccctggatctggaagaggagaaggcaaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactagctaggatagctgctgctagatcccttctacataaggccaaagaggagat +gttcaacaggatcaggccagtggttgttatgatatcaggcaggcctggcattggaaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggcgt +cgatcactgggatgcctacaggggagagaggatagtcttgtgggatgactacggcatggggagccctgttaa +ggacgctctaacactgcaagagctggccgacacatgcccagtcactttaaattgtgacaggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagaggcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagaccattttaaaccagacttctcccacatcaagctga +ctctagccccccagggtgggtttgacaaaaatggcaacaccccacacggtaagggaaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgaattccagctccaaggaa +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcgacactcaagaatgtgaagaccctggaagatcttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatctacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaagttaaagacaatgcatcccagactgtaaacgaggtacaatccgcaa +ttctcaggctcaggcaagcgagggccagatattacatcagctgcttccaagacctcgtctatactctcatgc +aggttgccggagcatcattcgtagtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccggccgagac-------------ccaggaggtgaatgagtccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggatacagaaccagaaggcaagaaaggtaagaaca +agaaaggaagaggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaattagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +ggattttccgcccgacaaagaaacagaggaaggaggagaggggtgtgcttggcttagtcaccggctcagaca +tcaggaagaggagaccagatgacttccaaccaaaaggcaacctgtgggcagatgacaccagaagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagttccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcacaagtctggagagttttgcaggttcagattcccaagacctatc +aggccagatgtcacaggactcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +aggcccacaggtgagatgatccccttagcagtgaggatgggcacacatgcatccatgaaaatacagggcaga +accgttggtggccagatgggaatgcttctcacaggagcgaacgcgaagaacatggacctcggcactggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaacgacattgttgtcgcgggtgttcacaccgcagca +gcccgaggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagactaag +ttctggcgttcatcaccagatgccttgccacctggcacatatgagcctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccttcccttcaacaagtcatgagggaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcgtgtgcctcattggacaaaaccacctccagtggtagtccccat +catgttaagaaaaatgaccactggaatggggagaccttcactggtccacttgcagatcaggcatctaaagcc +aatctcatgtatgagcaggctaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaagaaaataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcctttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtagggatg +aacatgaatgaagatggccctattatatttgacaaacattctaagtacaggtaccactatgatgctgactat +t-ctaggtgggactcaacccaacaaaggaacattctttctgccgctatggaagtgatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttgtagcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttatggggacgatgagatcgtcagtactgacatcaatcttgaccccatgaagttgacacagaaactc +agggagtatggtctggttcccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggttggtttggaaagctggaccaagactca +atccttaggcagctgtactggacaagggggcctaaccatgagaacccgtacgagagcatggttcctcattct +cagcgggccacacaactcatggcccttcttggtgaggcctcactacatggcccccagttttataagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtagctggtgcatcgctggcgacaccagttgccgggcaacacaatataattga +tccctggataagaaataattttgtacaagcccctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgctcgatttggagttgggaccagaactaaacccctatctcgctcatctggcccgtatgtataa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaatgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaacttgtcaccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaactagaaccagttctattacctatgccagatattagaaacaacttcttccatta +caatcagagcaatgac---ccaaaattgagattgttagctatgctctacacccctttaagggctaataattc +tggtgatgatgtgtttacagtttcttgtagggtcctcactaaaccgtcacctgattttgaattcacattctt +ggtcccccctacggttgaatctaaaaccaaacagttcacactgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggcaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggttatagctaa---------- +----------gaatggagatgt-----------------------------------gaggtcctatag--- +--gatggaca-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagatacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----cccagccacg--------aga-----------gcccatgaagccaacat +taacactggtggagaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggtaggcg---actcct---------cccatcctttcagacagtgggtcctgccccg +atacggtggacat-ctcacc------aacaacacccacctggctccagcagtggcccccctattcccaggtg +agcagattctattctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--cgggttacgtggactgccttgtcccccaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcttgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggccagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcactcataaatgctgg---ggctaatgctattaaccaaaaagttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccaccaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctctcctacggatgccgcgaggggttctgtcggcacaccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcagaata--------------gacaacctcctaaag----------------------------------- +----------------------------------------tagatccctctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcgactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------ccatttaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatga---atggagcgttgcaaacaacatatgtaacgccaccatccagtag +ggcgtca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +atctgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgctcttcttttc------ca-ctattcct---ttaattcttt +c----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MF140649.1/1-7538 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E7800012_p13_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +----------------------------c-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcagtcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatccctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggaccttaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcctagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgatacatgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcaggcagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatac +aaattgctggggctgcattcgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccaacgacatcaaaactgagggtaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgctggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacgaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcgaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgctaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccacta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgtttacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagaacaaatggctcgact--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccagcaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140650.1/1-7545 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E1300300_p13_d51 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +---------------------cctctcac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcagtcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatccctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggaccttaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcctagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagggcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgatacatgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcaggcagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatac +aaattgctggggctgcattcgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccaacgacatcaaaactgagggtaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgctggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacgaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcgaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgctaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaaccagtgttgatccccttacccgatgttaggaataatttctaccacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgtttacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccagctgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagaacaaatggctcgact--------cgc-----------ggccacaaagccacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtagtactacccaccgaaatgaaccccagcaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccacttttccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctatctttgctggattggcatctgacgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggtcatcaatcaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatcaacaacaggcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgcctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140651.1/1-7545 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E7800019_p13_d235 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +---------------------cctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcagtcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaagattgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggaccttaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcctagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatccgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgatacatgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcaggcagcttgctgccgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaaattgacagaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatac +aaattgctggggctgcattcgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaagttgtgggctgatgatgacaggaatgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcctgttcataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcgcgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagttggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgctggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacgaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtcagcacagacataaaattggacccagaaaaattgacagcgaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgctaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcaatcccaccaaatttcccaactgaaggtttgagccccagccaggtctctatgttcccccacat +aatagtagatgttaggcaattggaaccagtgttgatccccttacccgatgttaggaataatttctaccacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgtttacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagaacagatggctcgact--------cgc-----------ggccacaaagccacagt +gctcactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtaatactacccaccgaaatgaaccccagcaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgatcccccaggaatgggtgcagcatttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggtcctcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctgtctttgctggattggcatctgacgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggtcatcaatcaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatcaacaacaggcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggtcgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgcctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcatgcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140652.1/1-7520 |Norovirus GII strain Norovirus/GII/Hu/NL/2008/GII.P4-GII.4/Rotterdam/E7800015_p14_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccattgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatccctcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccaacaatgagttggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcactacgcgcattatcaagcgtgtga------acattcaagacttatggt +caaagccacaagtggaaaacacagagga--------ggctaccaaaaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccgaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatggattgaagccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcgggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgctgatccctttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaggaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140653.1/1-7494 |Norovirus GII strain Norovirus/GII/Hu/NL/2008/GII.P4-GII.4/Rotterdam/E1300305_p14_d39 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------aac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccattgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatccctcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccaacaatgagttggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcactacgcgcattatcaagcgtgtga------acattcaagacttatggt +caaagccacaagtggaaaacacagagga--------ggctaccaaaaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccgaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatggattgaagccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcgggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgctgatccctttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaggaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +caatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatatc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140654.1/1-7554 |Norovirus GII strain Norovirus/GII/Hu/NL/2008/GII.P4-GII.4/Rotterdam/E7800023_p14_d109 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +----------------------------c-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagcttaccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gactggaacaattctggagatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacaaggagaaacgtt +tccctacacagcctttgacaacaattgctataccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgaatccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggacctcgtagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggagaaaaatgaactggctatggtgagatccattgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccgccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatccctcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccaacaatgagttggctggcaccc +tgcatcatctgaggtgcgccagaatcaggtactacgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcactacgcgcattatcaagcgtgtga------acattcaagacttatggt +caaagccacaggtggaaaacacagagga--------ggctaccaaaaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggggtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccgaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttactgagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgaaaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaag +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccgatgc +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatggattgaagccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgccggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcgggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgctgatccctttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaggaaattccagc +ccctctgggaactccagatttcgtggggaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +caatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatatc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaacggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctgtctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatcaacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcactaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------ct----tt-------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaattaaa----------------- +------------------------------------------------------------------------ +- +>MF140655.1/1-7546 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E7800013_p15_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------gcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctgtggagccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaagctaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggtaagatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtaagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggagaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggggatccagctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcatcgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggatcccgttgttggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggtgttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaaccgaaggactgagcccctgccaagtcactatgttcccccattt +gataatagatgttagacaactggaacctgtgttgatccccttgcctgatgttaggaacaatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------gttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccgaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgcttattttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +gtattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcacaa +gcaaggctttgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggagcggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgttactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140656.1/1-7492 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E1300263_p15_d41 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctgtggagccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcataaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaagctaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggtaagatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtaagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggagaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacaaagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggggatccagctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcatcgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggatcccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggtgttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaaccgaaggactgagcccctgccaagtcactatgttcccccattt +gataatagatgttagacaactggaacctgtgttgatccccttgcctgatgttaggaacaatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------gttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgcttattttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +gtattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagctttacaa +gcaaggctatgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgactcctgggttaaccaattctacacacttgcccccatgggaaatggagcggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgataataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgttactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140657.1/1-7543 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E1300264_p15_d81 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctatggagccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacccct +ccccactatggatgactccaagttaaagaaggtggctgacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcagtgga +actcgtccctgtagtgatggggggaattggtttggtgttaggattcaccaaagagaagattggtaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaactcaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggataacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaagccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggagaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcctaaccacggggatccagctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggatcccgttgttggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggtgttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaaccgaaggactgagcccctgccaagtcactatgttcccccattt +gataatagatgttagacaactggaacctgtgttgatccccttgcctgatgttaggaacaatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccgaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +gtattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcatttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcacaa +gcaaggctttgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggagcggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140658.1/1-7487 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E1300265_p15_d102 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +----------------------------c-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccatcagcctcgctaggatagagttaacaccactctccttgtactg +gaggcctgtgtatacccctc---aatacctcatctctccagacgctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggctttttcaggccctaccaagaatggaacaggaaacccct +ccccactatggatgactccaagttaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +cagacccataaaagatataatagggaaactaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgattttcagttgcaaggaccggaggaccttgcagtgga +actcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggtaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttttggcgaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagactaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaaaatcgcagcctcccttacaggggaccaacgtgtgggcctcatcccacgcaatggtgt +tgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctcttaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggctaatccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgatttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgattttgaaatgcagggcc +caactatcaccaccttcaactttgatcgcaacaaattgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaattaagaagtgccagatagtgtatggtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacaaagttcaaagcgcctccgtgcagaccaataatgagctgactggcgcac +tgcaccatctaaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaggaaaggaatggcaggtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaagaggaagaggccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaaggaaaactgtgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gattctgggtctccc-ctagtttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcactgtggtcacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggagtgagggagaggctgtacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccaggaaatgctccaaaactcagcaccaaaaccaag +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccattcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacatccagtggccatccgcac +cacatgcggaaaaatgactgttggaacggggaatccttcacaggcaagctggcagatcaggcttctaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcacttaaggatgaattagttaaa +actgacaaaatttataataagatcaagaagaggctcctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcgcactgcgtctcacttcccattagagttggtatg +aatatgaacgaggatggccccatcatcttcgagaggcattccaggtacgcataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaattatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttaacagcaaaactc +agggaatatgggttaaaaccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttaaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagatccagctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcacttcacggcccagcattctacagcaaaatc +agcaagttggtcatcgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgccccatctga---tgggcccacagctaacctcgtcccagcggtcaacaatga +ggttatggctttggagcccgttgccggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggtcctgacttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagttccaccaaattttccaaccgaagggataagcccctgccaagtcactatgttcccccatat +aataacagatgttagacaactggaacctgtgttaatccccttgcctgatgttaggaacaacttctatcatta +taatcaatcaaatgaa---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccgaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +ttattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcacaa +gcaaggctttttaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctgggctt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------cacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcataagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140659.1/1-7492 |Norovirus GII strain Norovirus/GII/Hu/NL/2009/GII.P4-GII.4/Rotterdam/E1300266_p15_d174 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctacggagccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcataaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgctttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaagctaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtggtgatggggggaattggtttggtgttagggttcaccaaagagaagattggtaagatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtaagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggctgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgagacgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaggtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaag +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggagaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgat +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccctatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacaaagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggggatccagctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcatcgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggaccccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggtgttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaaccgaaggactgagcccctgccaagtcactatgttcccccattt +gataatagatgttagacaactggaacctgtgttgatccccttgcctgatgttaggaacaatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagagttcaattctcca---------ctgacacaaa +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +gtattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcattgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagctttacaa +gcaaggctatgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgactcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgataataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgttactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140660.1/1-7495 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E1300267_p15_d215 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagacgctgtggaaccatt +acctggaacaattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatatctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcatggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggtaagatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtaagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcagggctactccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccatcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacagaagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggagaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcattaatgttcttgagcaaacaattgat +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccctatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacaaagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgataaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggggatccaactgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggaccccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggtgttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaaccgaaggactgagcccctgccaagtcactatgttcccccattt +gataatagatgttagacaactggaacctgtgttgatccccttgcctgatgttaggaacaatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +ttattcaggtaga-gatagt------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcacaa +gcaaggctttttaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctgggctt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +ccacggaaaagcgccgggaggcacg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140661.1/1-7493 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E1300268_p15_d419 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggaaaatagagacgctgtggaaccatt +acctggaacgattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcatggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggcaagatgct +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtaagatccatcgaggatgcagt +cctggacctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcaccgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaaaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaacaa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcaggtctgctccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaacatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtactccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccgtcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacaggaatgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaatccaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctgggaaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggggaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcaaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacatcatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcctaaccacggggatccaactgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccagcctcgtcccagcggtcaacaatga +ggttatggctttggaccccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagttccaccaaatttcccaaccgaagggataagcccctgccaagtcactatgttcccccatat +aataacagatgttagacaactggaacctgtgttaatccccttgcctgatgttaggaataacttctatcatta +taatcaatcaaatgaa---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagaattcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccatcgaaatgaaccccaacaatgggtgctcccaga +ttattcaggtaga-gataat------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcacaa +gcaaggctttttaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctgggctt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgaaaattaaacagacagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------cacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcataagcgaggggagtcacg--------ggt------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140662.1/1-7540 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E1300269_p15_d476 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaatgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagacgctgtggaaccatt +acctggaacgattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcatggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggcaagatgct +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtaagatccatcgaggatgcagt +cctggacctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaaaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaacaa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcaggtctgctccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtactccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccgtcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacaggaatgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaatccaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctgggaaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggggaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcaaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacatcatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcctaaccacggggatccaactgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccaacctcgtcccagcggtcaacaatga +ggttatggctttggaccccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagttccaccaaatttcccaaccgaagggataagcccctgccaagtcactatgttcccccatat +aataacagatgttagacaactggaacctgtgttaatccccttgcctgatgttaggaataacttctatcatta +taatcaatcaaatgaa---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcactttactccaaagttgggcagagttcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaaa +ttattcaggtaga-gataat------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagtacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgcaagcttcataa +gcaaggctttgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggaacgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccaccact--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------cacccccgctcgaggctcctcc------------------ag +tacactct-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacctttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcaaaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ccttc------------tt----t--------tcttt- +-------a-------gt---gcct------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140663.1/1-7544 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E7800021_p15_d495 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------tcc-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttacagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagacgctgtggaaccatt +acctggaacgattctggaaatgtgggatggagaaatctaccattatggcatatatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagccgccattagcctcgctaggatcgagctaacaccactctccttgtactg +gagacctgtgtatacccctc---aatacctcatctctccagactctctcaagaaattacatgaagagacgtt +cccctacacagccttcgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcatggct +gag---taggaggatgatccagagaacaactggcttcttcaggccctaccaagaatggaacaggaaacctct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtctttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctcggtgatttccagttgcaaggaccggaggaccttgcggtgga +actcgtccctgtagtgatggggggaattggtttggtgttagggttcaccaaagagaagattggcaagatgct +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtaagatccatcgaggatgcagt +cctggacctcgaggcaattgaaaacaatcacttaaccatcttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgatcttgaggaggagaaagccaggaaactctcaaccaaatctgcttcacctgacattgt +gggcacaatcaacgcccttctggcaaggatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaaaatcgcagcctcccttacaggagaccagcgcgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggtgagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccctctcaccctaaactgtgacaggattgagaacaa +aggaaaggtttttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgagaaggcga +agcgtgacttcccaggccagcccgacatgtggaagaacgccttcagctctgatttctcacacataaaactag +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgctcgggcatcaggtctgctccatgagaggttagatgagtttgaaatgcagggtc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatggtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgataaagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctacggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtactccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccagaccacaagtggagaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaaggattagagaggaaaggaatggcaggtactccatagaagaataccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaagaggccaagatccggcaaa +ggatcttcaggccgtcaaggaaacaacgcaaggaggaaagggcttctctcggtttggtcacaggctctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactatgggctgatgatgacaggaatgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggcacaaaggagttcttt +ggagtccctatcaaacaaatccaggtacacaaatcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactgctcatcaaa +aggcccactggagaactcatgcccctggcagttaggatggggacccatgcaaccatgagaattcaagggcgc +gctgttggaggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctgggaaccacacca +ggtgattgtggctgtccttacatctacaagagaggaaatgactatgtggtcattggggtccacacggctgcc +gctcgtggggggaacactgttatatgtgccacccagggaagtgagggggaggccatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggaccagggaatgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcaccactcccacctggtacctacgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggatcaattgaagccgttcacagagcctaggggc +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccgcctgagaaatggtcattcgcacaagcttgcgcgtcccttgataagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaagaaggaaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatctataaaaagatcaagaagagactcctctggggctcggatttggcaaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtctcacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-cacgatgggattcaacacaacagagagacgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtctcctgacatcatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattagacccagaaaagttgacagcaaaactc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgacgacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcctaaccacggggatccaactgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggctgcacttcacggcccagcattctacagcaaagtc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggcccgcagccaacctcgtcccagcggtcaacaatga +ggttatggctttggaccccgttgctggtgccgctattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagttccaccaaattttccaaccgaagggataagcccctgccaagtcactatgttcccccatat +aataacagatgttagacaattggaacctgtgttaatccccttgcctgatgttaggaataacttctatcatta +taatcaatcaaatgaa---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaaa----------- +-----------ttggaag------------------------------------------------ta---- +-------ctcaaa----------------------------------cttacaca----------------- +----------------atgaacctggcctcccaaaattggaataattatgatccaacagaagaaatcccagc +ccccctgggaaccccagattttgtaggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagagtgatggctcgacc--------cgt-----------ggtcacgtagccacagt +gagcactggaagtgctcattttactccaaagttgggcagaattcaattctcca---------ctgacacaag +caatgacct---tgaagctcgccaaaacacga---------------------------gattcaccccag- +--------tcggcgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaga +gtattcaggtaga-gataat------cacaatgtacacctagcacctgctgtggcccccacttttccgggcg +agcaacttcttttctttaggtccactatacccg------gatgcagcgggta------cccca--------- +--acatggaattggattgcctactcccccaggagtgggtgcagcacttctaccaagaatcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaagtagggttttgtttgagtgtaagcttcacaa +gcaaggctttgtaacagtggctcatactggccaacatgatttgattatccctcccaatggctattttagatt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgaaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +agctctctaatcaatgctgg---ggctgggaccattaatcaaaaagttgattttgacaataatagaaaattg +caacaagcttccttccaatatagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaaattaaacagacaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggctcccgatgctaggattacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gaaccaatctcagggctac------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +tacacttt-----------caaat------------gcttctactgtcactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaacttgtcacccttcatga---ggggggtccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtcagcgaggggagtcacg--------ggtataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaa----------------------------------------- +------------------------------------------------------------------------ +- +>MF140664.1/1-7508 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E7800014_p16_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aga---------------------cccccacgaccacctaccccggaactggtc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggatgaggcagtggtc +tcttatagtg----------ttaa---agatggcatttccggcctgcccgagctctccactgtcaggcagcc +ggacgaaaccaacacggccttctgtgtccccccactcagcctaagggagaacaaggatgctaaggagccact +gaccggaacaattctggagatgtgggatggtgagttctaccactacggcatatatgtggaacgaggtcttgt +acttggcgtgcacaaaccaccggccgccgtcagcctcgccaggatcgagctaacaccactctccttgttttg +gaggcctgtgtatacccccc---aatatctcatctctccagactccctcaagaaactgcacggagaatcatt +cccctacacagcctttgacaacaattgttacgccttttgttgctgggtcttggacctaaacgactcgtggct +gaa---taggagatgtatccagagaacaactggtttcttcagaccttaccaagagtggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgcgactg +gactttcgcaggcatagtggaatccttgatactcttgatggagctcttt---ggaattttctggacaccccc +agacgtgtctgcgatgattgcccccttactcggcgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtggtgatggggggaattggcttggtgctaggatttaccaaggagaaaattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagatgaagcaagtgagttggagatggtcaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgctcgttccatggtgcatcgagcaaaggaggagct +ctccagcaggccaagacctgttgtgatgatgatatcaggcagaccaggaatagggaagacccatcttgctag +ggaagtggccaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaacggcgt +cgaccactgggacgcctacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +tgatgctctcaggttacaagaactcgctgacacctgccctctcactctaaactgtgacaggattgaaaacaa +aggaaaggtcttcgacagtgatgtcataattatcaccaccaatttggccaacccagcaccactagactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagctctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcaacagggctactccatgagaggctagatgagtttgaattacagggcc +cagctctcaccaccttcaattttgatcgtaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggacacaatgagagttggaaagcagctcaaggatgtcaaaaccatgccagatctaaagcaag +cactcaagaacatcacaattaagaagtgccagatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtacagaccaataacgagctggccggtgccc +tacaccatctaaggtgcgccaggatcaggtattatgtcaagtgtgctcaggaggctttatattccatcattc +agattgctggagctgcatttgtcaccacgcgcattgctaagcgcatga------acatacaagacttctggt +caaaaccacaagtggaagacacagggga--------gaccatcaacaaagaagggtgcccaaaacccaga-- +-gat----gaagagg---agttcgtcatttcatctgacgacatcaaagctgaaggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgacgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaggaggaggaggccaagattcggcaaa +ggattttcaggccaacaagaaaacaacgcaaggaagaaagggcctctctcggtttggtcacaggctctgaaa +tcaggaagagaaaccccgatgacttcaagcccaaggggaagctgtgggccgatgatgacagaagtgtggact +acaatgagagactcagctttgaggccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagcctgtttataacatcaactcacgttataccccagggtgcaacggagttcttt +ggagtccccattaagcagattcaaatacacaaaacaggcgaattctgtcgcttgagattcccaaaaccaatc +aggaatgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtctcactactcgtcaaa +aggcctactggagaacttatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttttgacagggtccaacgccaaaaacatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaaaaggggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgat +agtaagggaacatactgtggtgctccaattctaggcccagggggtgctccaaaacttagcactaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaacagttgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgat +ccacctgagaaatggtcatttgcgcaagcttgtgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacgggactactttcacaggcaagctggcagaccaagcttccaaggcc +aacctgatgttcgaagaggggaaaagcatgaccccggtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggctcctctggggctcggacttggcaaccatgatccggtgc +gctcgagcattcggaggcttgatggatgaacttaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcatgccaggtacaaatatcattatgatgctgactac +t-ctcggtgggattcaacacaacaaagggccgtattggcaacagccctagaaatcatgg-ttaaattttcct +cagaaccacattt-ggctcaggtggttgcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +aaaataacaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatctgtcccctgatattatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattgacagcaaaactc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttgaat +ggcctaaccttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactagaggccctaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggagaggccgcactacacggcccggcattctacagcaaaatt +agcaaattagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtctacagccagcctcgtcccagcggtcaacaatga +ggtcatggctttggaacccgttgttggtgccgctattgcggctcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccggg +tgagatactctggagcgcgccccttggccctgatctaaacccatacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccgaattttccaactgaaggtttgagccccagtcaggtcactatgttccccaatgt +aataatagatgttaggcaattggaacctgtgctaatccccttacctgatgttaggaatattttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactattgaggaaatgactaa +ttctaga---ttccctatccctctggaaaagttgtacacgggccccagcagtgctttccaagtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgccgtcagcgtctgctcctt +cagag-----------------------------------------gaagtgtcacccaag----------- +-----------ttggagg------------------------------------------------aa---- +-------cccatg----------------------------------attacaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaggaagtcccagc +ccctctgggaactccagattttaaaggaaaaatccaaggtgtgctcacccaaa------------------- +-----ca-----acaagggggaatggctcgacc--------cgc-----------gcacacaaagctacagt +gagcactggggctgccaacttcactccaaaattgggtaaagttcaattccaca---------ctgacacaaa +cactgattt---gaacgctaacgagaacacca---------------------------aattcaccccag- +--------tcggcgtcatccaagaaagtgacaa---ccaccgagatgaaccccaacaatgggtgctcccaga +ctacgcaggcaga-ggtacc------cacaatgtgcacttagcccctgccgttgctcccacttttccaggtg +aacaacttctattctttaggtccactctgcccg------ggtgtggcgggta------cccca--------- +--acatggatctggattgcgtgctcccccaggaatgggtgcagcacttctaccaagaagcagccccggcaca +atctgatgtggctttactgagatttgtgaatccagacacaggtagggttctgtttgagtgtaaactccataa +atcaggctatgtcacagtggcttacactggtccacatgatttggttatcccccccaatggttattttagatt +tgattcttgggttaatcagttttacacacttgcccccatgggaaatggagcggggcgtaaa---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgacgtccttagttctggactt +ggttctctgatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataacagaaaatta +caacaagactccttccaatttagtagtaacctgcaacaggcttcctttcaacatgacaaagagatgctccga +gctcaaattgaggccactcaaaaattgcaacagggtatgatggaaattaaacaggcaatgctcctaaagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttctggactggaatgga +acaaggcactgggctcctaatgctagaaccacaacatacaatgcaggcggtttttccaccccc--------- +ca---------------------accatcgggggcatc---------------------------------a +ccaggaa----------------gaaccaaccttagggccac------------------------------ +------------------------------tgtccccgctcggggctcttcttc---------------ttc +taaacttt-----------ctagt------------acttctactgctactt-------------------- +----------ctgtat-----actcaaatca------aacagcttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctctcaacacatcattcgtctccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactagtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140665.1/1-7508 |Norovirus GII strain Norovirus/GII/Hu/NL/2010/GII.P4-GII.4/Rotterdam/E1300288_p16_d101 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctcac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aga---------------------cccccacgaccacctaccccggaactggtc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggatgaggcagtggtc +tcttatagtg----------ttaa---agatggcatttccggcctgcccgagctttccactgtcaggcagcc +ggacgaaaccaacacggccttctgtgtccccccgctcagcctaagggagaacaaggatgctaaggagccact +gactgggacaattctggagatgtgggatggtgagttctaccactacggcttatatgtggaacgaggtcttgt +acttggcgtgcacaaaccaccggccgccgtcagcctcgccaggatcgagctaacaccactctccttgttttg +gaggcctgtgtatactcccc---aatatctcatctctccagactccctcaagaaactgcacggagaatcatt +cccctacacagcctttgacaacaattgttacgccttttgttgctgggtcttggacctaaacgactcgtggct +gaa---taggagatgtatccagagaacaactggtttcttcagaccttaccaagagtggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaatgtattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgcgactg +gactttcgcaggcatagtggaatccttgatactcttggtggagctcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtggtgatggggggaattggcttggtgctaggatttaccaaggagaaaattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagatgaagcaagtgagttggagatggtcaggtccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgctcgttccatggtgcatcgagcaaaggaagagct +ctccagcagaccaagacctgttgtgatgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaacggcgt +cgaccactgggacgcctacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +tgacgctctcaggttacaagaacttgctgacacctgccctctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcataattatcaccaccaatttggccaacccagcaccactagactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctggagtcgaaaaggcga +aacgtgacttcccaggtcaacctgacatgtggaagaacgctttcagctctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcaacagggctactccatgagaggctagatgagtttgaattacagggcc +cagctctcaccaccttcaattttgatcgtaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggacacaatgagagttggaaagcagctcaaggatgtcaaaaccatgccagatctaaagcaag +cactcaagaacatcacaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtacagaccaataacgagctggccggtgccc +tacaccatctaaggtgcgccaggatcaggtattatgtcaagtgtgctcaggaggctttatattccatcattc +agattgctggagctgcatttgtcaccacgcgcattgctaagcgcatga------acatacaagacttctggt +caaaaccacaagtggaagacacagggga--------ggccatcaacaaagaagggtgcccaaaacccaga-- +-gat----gaagagg---agttcgtcatttcatctgacgacatcaaagctgaaggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaggaggccaagattcggcaaa +ggattttcaggccaacaagaaaacaacgcaaggaagaaagggcctctctcggtttggtcacaggctctgaaa +tcaggaaaagaaaccccgatgacttcaagcccaaggggaagctgtgggccgatgatgacagaagtgtggact +acaatgagagactcagctttgaggccccaccaagcgtttggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagcctgtttataacatcaactcacgttataccccagggtgcaacggagttcttt +ggagtccccattaagcagattcaaatacacaaaacaggcgaattctgtcgcttgagattcccaaaaccaatc +aggaatgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtctcactactcgtcaaa +aggcctactggagaacttatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttttgacagggtccaacgccaaaaacatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaaaaggggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgctccaaaactcagcactaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggaacagttgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgat +ccacctgagaaatggtcatttgcgcaagcttgtgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaatgactgctggaacgggactactttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaaaagcatgaccccggtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggctcctctggggctcggacttggcaaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcatgccaggtacaaatatcattatgatgctgattac +t-ctcggtgggattcaacacaacaaagggccgtattggcaacagccctagaaatcatgg-ttaaattttcct +cagaaccacattt-ggctcaggtggttgcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +aaaataacaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatctgtcccctgatattatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattgacagcaaaactc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttgaat +ggcctaaccttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactagaggccctaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggagaggccgcactacacggcccggcattctacagcaaaatt +agcaaattagttattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtctacagccagcctcgtcccagcggtcaacaatga +ggtcatggctttggaacccgttgttggtgccgctattgcggctcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccggg +tgagatactctggagcgcgccccttggccctgatctaaacccatacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagtcaggtcactatgttccccaatgt +aataatagatgttaggcaattggaacctgtgctaatccccttacctgatgttaggaatattttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactattgaggaaatgactaa +ttctaga---ttccctatccctctggaaaagttgtacacgggccccagcagtgctttccaagtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgccgtcagcgtctgctcctt +cagag-----------------------------------------gaagtgtcacccaag----------- +-----------ttggagg------------------------------------------------aa---- +-------cccatg----------------------------------atttcaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaggaaatcccagc +ccctctgggaactccagattttaaaggaaaaatccaaggtgtgctcacccaaa------------------- +-----ca-----acaaggggggatggctcgacc--------cgc-----------gcacacaaagccacagt +gagcactggggctgccaacttcactccaaaattgggtaaagttcaattccaca---------ctgacacaac +cactgattt---gaacgctaacgagaacacca---------------------------aattcaccccag- +--------tcggcgtcatccaagaaggtgacaa---ccaccgaaatgaaccccaacaatgggtgctcccaga +ctacgcaggcaga-ggtacc------cacaatgtgcacttagcccctgccgttgctcccacttttccaggtg +aacaacttctattctttaggtccactctgcccg------ggtgtggcgggta------cccca--------- +--acatggatctggattgcgtgctcccccaggaatgggtgcagcacttctaccaagaagcagccccggcaca +atctgatgtggctttactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcttacactggtccacatgatttggttatcccccccaatggttattttagatt +tgattcttgggttaatcagttttacacacttgcccccatgggaaatggagcggggcgcaaa---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgacgtccttagttctggactt +ggttctctgatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaacaacagaaaatta +caacaagactccttccaatttagtagtaacctgcaacaggcttcctttcaacatgacaaagagatgctccga +gctcaaattgaggccactcaaaaattgcaacagggtatgatggaaattaaacaggcaatgctcctaaagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttctggactggaatgga +acaaggcactgggctcctaatgctagaaccacaacatacaatgcaggcggtttttccaccccc--------- +ca---------------------gccatcgggggcatc---------------------------------a +ccaggaa----------------gaaccaaccttagggccac------------------------------ +------------------------------tgtccccactcggggctcttcttc---------------ttc +taaacttt-----------ctagt------------acttctactgctactt-------------------- +----------ctgtat-----actcaaatca------aacagtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctctcaacacatcattcgtctccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactagtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140666.1/1-7518 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E1300289_p16_d202 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------------------------cgctgttgcc------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aga---------------------cccccacgaccacctaccccggaactggtc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggatgaggcagtggtc +tcttatagtg----------ttaa---agatggcatttccggcctgcccgagctttccactgtcaggcagcc +ggacgaaaacaacacggccttctgtgtccccccgctcagcctaagggagaacaaggatgctaaggagccact +gaccgggacaattctggagatgtgggatggtgagttctaccactacggcttatatgtggaacgaggtcttgt +acttggcgtgcataaaccaccggccgccgtcagcctcgccaggatcgagctaacaccactctccttgttttg +gaggcctgtgtatactcccc---aatatctcatctctccagactccctcaagaaactgcacggagaatcatt +cccctacacagcctttgacaacaattgttacgccttttgttgctgggtcttggacctaaacgactcgtggct +gaa---taggagatgtatccagagaacaactggtttcttcagaccttaccaagagtggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaatgtattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgcgactg +gactttcgcaggcatagtggaatccttgatactcttggtggagctcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtggtgatggggggaattggcttggtgctaggatttaccaaggagaaaattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggttggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagatgaagcaagtgagttggagatggtcaggtccatcgaggatgcagt +gctggacctcgaggcgattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgctcgttccatggtgcatcgagcaaaggaagagct +ctccagcagaccaagacctgttgtgatgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagaagatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaacggcgt +cgaccactgggacgcctacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +tgacgctctcaggttacaagaacttgctgacacctgccctctcactctaaactgtgacaggattgaaaacaa +aggaaaagtctttgacagtgatgtcataattatcaccaccaatttggccaacccagcaccactagactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctggagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgctttcagctctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcaacagggctactccatgagaggctagatgagtttgaattacagggcc +cagctctcaccaccttcaattttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggacacaatgagagttggaaaacagctcaaggatgtcaaaaccatgccagatctaaagcaag +cactcaagaacatcacaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtacagaccaataatgagctggccggcgccc +tacaccatctaaggtgcgccaggatcaggtattatgtcaagtgtgctcaggaggctctatattccatcattc +agattgctggagctgcatttgtcaccacgcgcattgctaagcgcatga------atatacaagacttctggt +caaaaccacaagtggaagacacagggga--------ggccatcaacaaagaagggtgcccaaaacccaga-- +-gat----gaagagg---agttcgtcatttcatctgacgacatcaaagctgaaggcaagaaggggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgacgagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcaaccgaggaggacttctgtgaggaggaggaggccaagattcggcaaa +ggattttcaggccaacaagaaaacaacgcaaggaagaaagggcctctctcggtttggtcacaggctctgaaa +tcaggaagagaaaccccgatgacttcaagcccaaggggaagctgtgggccgatgatgacagaagtgtggact +acaatgagagactcagctttgaggccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagcctgtttataacatcaactcacgttataccccagggtgcaacggagttcttt +ggagtccccattaagcagattcaaatacacaaaacaggcgaattctgtcgcttgagattcccaaaaccaatc +aggaatgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtctcactactcgtcaaa +aggcctactggagaacttatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttttgacagggtccaatgccaaaaacatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaaaaggggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgctccaaaactcagcactaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaacagttgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgat +ccacctgagaaatggtcatttgcgcaagcttgtgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaatgactgctggaacgggactactttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaaaagcatgaccccggtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggctcctctggggctcggacttggcaaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcatgccaggtacaaataccattatgatgctgattac +t-ctcggtgggattcaacacaacaaagggccgtattggcaacagccctagaaatcatgg-ttaaattttcct +cagaaccacattt-ggctcaggtggttgcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +aaaataacaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatctgtcccctgacattatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattgacagcaaaactc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttgaat +ggcctaaccttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactagaggccctaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggagaggccgcactacacggcccggcattctacagcaaaatt +agcaaattagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggaaggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtctacagccagcctcgtcccagcggtcaacaatga +ggtcatggctttggaacccgttgttggtgccgctattgcggctcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccggg +tgagatactctggagcgcgccccttggccctgatctaaacccatacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagtcaggtcactatgttccccaatgt +aataatagatgttaggcaattggaacctgtgctaatccccttacctgatgttaggaatattttctatcatta +taatcaatcaaatgat---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactattgaggaaatgaccaa +ttctaga---ttccctatccctctggaaaagttgtacacgggccccagcagtgctttccaagtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgccgtcagcgtctgctcctt +cagag-----------------------------------------gaagtgtcacccaag----------- +-----------ttggagg------------------------------------------------aa---- +-------cccatg----------------------------------attacaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaggaaatcccagc +ccctctgggaactccagactttaaaggaaaaatccaaggtgtgctcacccaaa------------------- +-----ca-----acgagggggagtggctcgacc--------cgc-----------gcacacaaagctacagt +gagcactggggctgccgacttcactccaaaattgggtaaagttcaattccaca---------ctgacacaaa +caatgattt---ggacgctaacgaaaacacca---------------------------aattcaccccag- +--------tcggcatcatccaagaaggtgacaa---ccaccgaaatgaaccccaacaatgggtgctcccaga +ctacgcaggcaga-ggtacc------cacaatgtgcacttagcccctgccgttgctcccacttttccaggtg +aacaacttctattctttaggtccactctgcccg------ggtgtggcgggta------cccca--------- +--acatggatctggattgcgtgctcccccaggaatgggtgcagcacttctaccaagaagcagccccggcaca +atctgatgtggctttactgaggtttgtgaatccagacacaggtagggttctgtttgagtgtaaactccataa +atcaggctatgtcacagtggcttacactggtccacatgatttggttatcccccccaatggttattttagatt +tgattcttgggttaatcagttttacacacttgcccccatgggaaatggaacggggcgcaaa---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgacgtccttagttctggactt +ggttctctgatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaacaacagaaaatta +caacaagactccttccaatttagtagtaacctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gctcaaattgaggccactcaaaaattgcaacagggtatgatggaaattaaacaggcaatgctcctaaagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttctggactggaatgga +acaaggtactgggctcctaatgctaggaccacaacatacaatgcaggcggtttttccaccccc--------- +ca---------------------gccatcgggggcatc---------------------------------a +ccaggaa----------------gaaccaaccttagggccac------------------------------ +------------------------------tgtccccactcggggctcttcttc---------------ttc +taaacttt-----------ctagt------------acttctactgctactt-------------------- +----------ctgtat-----actcaaatca------aacagtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctctcaacacatcattcgtctccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactagtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaagcaaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-taat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a-------ct---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>MF140667.1/1-7508 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E1300290_p16_d403 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aga---------------------cccccacgaccacctaccccggaactggtc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggatgaggcagtggtc +tcttatagtg----------ttaa---agatggcatttccggcctgcccgagctttccactgtcaggcagcc +ggacgaaaacaacacggccttcagtgtccccccgctcagcctaagggagaacaaggatgctaaggagccact +gactgggacaattctggagatgtgggatggtgagttctaccactacggcttatatgtggaacgaggtcttgt +acttggcgtgcacaaaccaccggccgccgtcagcctcgccaggatcgagctaacaccactctccttgttttg +gaggcctgtgtatactcccc---aatatctcatctctccagactccctcaagaaactgcacggagaatcatt +cccctacacagcctttgacaacaattgttacgccttttgttgctgggtcttggacctaaacgactcgtggct +gaa---taggagatgtatccagagaacaactggtttcttcagaccttaccaagagtggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaatgtattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgcgactg +gactttcgcaggcatagtggaatccttgatactcttggtggagctcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtggtgatggggggaattggcttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggttggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagatgaagcaagtgagttggagatggtcaggtccatcgaggatgcagt +gctggacctcgaggctattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgctcgttccttggtgcatcgagcaaaggaagaact +ctccagcagaccaagacctgttgtgatgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtggccaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaacggcgt +cgaccactgggacgcctacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +tgacgctctcaggttacaagaacttgctgacacctgccctctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcataattatcaccaccaatttggccaacccagcaccactagactatgt +caattttgaagcatg-ctcgaggcgcatcgactttctcgtgtatgcagaagcccctggagtcgaaaaggcaa +aacgtgacttcccaggtcaacctgacatgtggaagaacgctttcagctctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcaacagggctactccatgagaggctagatgagtttgaattacagggtc +cagctctcaccaccttcaattttgatcgtaacaaagtgcttgccttcagacagcttgctgctgagaacaaat +acgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaaaaccatgccagatctaaagcaag +cactcaagaacatcacaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacaaagttcagagcgcctccgtgcaaaccaataacgagctggccggtgccc +tacaccatctaaggtgcgccaggatcaggtattatgtcaagtgtgttcaggaggctctatattccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgctaggcgcatga------acatacaagacttctggt +caaaaccacaagtggaagacacagggga--------ggccatcaacaaagaagggtgcccaaaacccaga-- +-gat----gaagagg---agttcgtcatttcatctgacgacatcaaagctgaaggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgacgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaagtggccattgccagggcgaccgaggaggacttctgtgaggaggaggaggccaagattcggcaaa +ggattttcaggccaacaagaaaacaacgcaaggaggaaagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccggatgacttcaagcccaaggggaagctgtgggccgatgatgacaggagtgtggact +acaatgagagactcagctttgaggccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctccc-ccagcctgtttataacatcaactcacgttataccccagggtgcaacggagttcttt +ggagtccccatcaagcagattcaaatacacaaaacgggcgaattctgtcgcttgagattcccaaaaccaatc +aggaatgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtctcactactcgtcaaa +aggcctactggagaacttatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttttgacagggtccaacgccaagaacatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaaaaggggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgctccaaaactcagcactaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggagcagttgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcatttgcgcaagcttgcgcgtcccttgacaagaccacttccagtggccacccatac +cacatgcggaaaaatgactgctggaacgggactactttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaaaagcatgaccccggtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggctcctctggggctcggacttggcaaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcatgccaggtacaaataccattatgatgctgattac +t-ctcggtgggattcaacacaacaaagggccgtattggcaacagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggttgcagaagaccttctttcccctagcgtgatggatgtgggtgacttc +aaaataacaatcaatgagggcctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatctgtcccctgacattatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttgaat +ggcctaaccttcctgcggaggactgtgactcgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactagaggccctaaccatgaagacccatctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactacacggcccggcattctacagcaaaatt +agcaaattagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggaaggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtctacagccagcctcgtcccagcggtcaacaatga +ggtcatggctttggaacccgttgttggtgccgccattgcggctcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccggg +tgagatactctggagcgcgccccttggccctgatttaaacccatatctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagtcaggtcactatgttccccaatgt +aataatagatgttaggcaattggaacctgtgctaatccccttacctgatgttaggaatatcttctatcatta +taatcaatcaaatgac---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactattgaggaaatgactaa +ttctaga---ttccctatccctctggaaaagttgtacacgggccccagcagtgctttccaagtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgccgtcagcgtctgctcctt +cagag-----------------------------------------gaagtgtcacccaag----------- +-----------ttggagt------------------------------------------------aa---- +-------cccatg----------------------------------attacaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaggaaatcccagc +ccctctgggaactccagacttcaaaggaaaaatccaaggtgtgctcacccaaa------------------- +-----ca-----acgaggctgggtggctcgacc--------cgc-----------gcacacaaagctacagt +gagcactggggctgctgacttcactccaaaattgggtagagttcaattccaca---------ctgacacaac +cactgattt---gaacgctaacgagaacacca---------------------------aattcaccccag- +--------tcggcgtcatccaagaaagtgacaa---ccaccgagatgaaccccaacaatgggtgctcccaga +ctacgcaggcaga-ggtacc------cacaatgtgcacttagcccctgccgttgctcccacttttccaggtg +aacaacttctattctttaggtccactctgcccg------ggtgtggcgggta------cccca--------- +--acatggatctggattgcgtgctcccccaggaatgggtgcagcacttctaccaagaagcagccccggcaca +atctgatgtggctttactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaactccataa +atcaggctatgtcacagtggcttacactggtccacatgatttggttattccccccaatggttattttagatt +tgattcttgggttaatcagttttacacacttgcccccatgggaaatggagcggggcgcaaa---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgatgtccttagttctggactt +ggttctctgatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaacaacagaaaatta +caacaagactccttccaatttagtagtaacctgcaacaggcttcctttcaacatgacaaagagatgctccga +gctcaaattgaggccactcaaaaattgcaacagggcatgatggaaattaaacaggcaatgctcctaaagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggcactgggctcctaatgctagaaccacaacatacaatgcaggcggtttttccaccccc--------- +ca---------------------gccatcgggggcatc---------------------------------a +ccaggaa----------------gaaccaaccttagggccac------------------------------ +------------------------------tgtccccgctcggggctcttcttc---------------ttc +taaacttt-----------ctagt------------acttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aacagtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctctcaacacgtcattcgtctccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactagtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140668.1/1-7533 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E7800022_p16_d451 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aga---------------------cccccacgaccacctaccccggaactggtc-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaggatgaggcagtggtc +tcttatagtg----------ttaa---agatggcatttccggcctgcccgagctttccactgtcaggcagcc +ggacgaaaacaacacggccttcagtgtccccccgctcagcctaagggagaacaaggatgctaaggagccact +gactgggacaattctggagatgtgggatggtgagttctaccactacggcatatatgtggaacgaggtcttgt +acttggcgtgcacaaaccaccggccgccgtcagcctcgccaggatcgagctaacaccactctccttgttttg +gaggcctgtgtatactcccc---aatatctcatctctccagactccctcaagaaactgcacggagaatcatt +cccctacacagcctttgacaacaattgttacgccttttgttgctgggtcttggacctaaacgactcgtggct +gaa---taggagatgtatccagagaacaactggtttcttcagaccttaccaagagtggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagataaagcctcttaacatcctcaacatcttggcctcatgcgactg +gactttcgcaggcatagtggaatccttgatactcttggtggagctcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtggtgatggggggaattggcttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggttggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagatgaagcaagtgagttggagatggtcaggtccatcgaggatgcagt +gctggacctcgaggctattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgctcgttccacggtgcatcgagcaaaggaagaact +ctccagcagaccaagacctgttgtgatgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtggccaagaagatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaacggcgt +cgaccactgggacgcctacaagggggagagggtcgtcctatgggacgattatggaatgagcaatcccatcca +tgacgctctcaggttacaagaacttgctgacacctgccctctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagtgatgtcataattatcaccaccaatttggccaacccagcaccactagactatgt +caattttgaagcatg-ctcgaggcgcatcgactttctcgtgtatgcagaagcccctggagtcgaaaaggcga +aacgtgacttcccaggtcaacctgacatgtggaagaacgctttcagctctgatttctcacacataaaactaa +cactggccccacagggtggtttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccattggctcccttcttgcccgggcaacagggctactccatgagaggctagatgagtttgaattacagggtc +cagctctcaccaccttcaattttgatcgcaacaaagtgcttgccttcagacagcttgctgctgagaacaaat +acgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaaaaccatgccagatctaaagcaag +cactcaagaacatcacaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacaaagttcagagcgcctccgtgcaaaccaacaacgagctggccggtgccc +tacaccatctaaggtgcgccaggatcaggtattatgtcaagtgtgttcaggaggctctatattccatcatcc +agattgctggagctgcatttgtcaccacgcgcatcgctaggcgcatga------acatacaagacttctggt +caaaaccacaagtggaagacacagggga--------ggccatcaacaaagaagggtgcccaaaacccaga-- +-gat----gaagagg---agttcgtcatttcatctgacgacatcaaagctgaaggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgacgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaagtggccattgccagggcgaccgaggaggacttctgtgaggaggaagaggccaagattcggcaaa +ggattttcaggccaacaagaaaacaacgcaaggaggaaagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccggatgacttcaagcccaaggggaagctgtgggccgatgatgacaggagtgtggact +acaatgagagactcagctttgaggccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctccc-ccagcctgtttataacatcaactcacgttataccccagggtgcaacggagttcttt +ggagtccccatcaagcagattcaaatacacaaaacgggcgaattctgtcgcttgagattcccaaaaccaatc +aggaatgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtctcactactcgtcaaa +aggcctactggagaacttatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttttgacagggtccaacgccaagaacatggacctaggcaccacacca +ggtgactgcggctgtccctacatctacaaaaggggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgctccaaaactcagcactaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggagcagttgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcatttgcgcaagcttgcgcgtcccttgacaagaccacttccagtggccacccatac +cacatgcggaaaaatgactgctggaacgggactactttcacaggcaagctggcagaccaagcttccaaggcc +aacctgatgttcgaagaggggaaaagcatgaccccggtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggctcctctggggctcggacttggcaaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcatgccaggtacaaataccattatgatgctgattac +t-ctcggtgggattcaacacaacaaagggccgtattggcaacagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggttgcagaagaccttctttcccctagcgtgatggatgtgggtgacttc +aaaataacaatcaatgagggcctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatctgtcccctgacattatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttgaat +ggcctaaccttcctgcggaggactgtgactcgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactagaggccctaaccatgaagacccatctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactacacggcccggcattctacagcaaaatt +agcaaattagttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggaaggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtctacagccagcctcgtcccagcggtcaacaatga +ggtcatggctttggaacccgttgttggtgccgccattgcggctcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccggg +tgagatactctggagcgcgccccttggccctgatttaaacccatatctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagtcaggtcactatgttccccaatgt +aataatagatgttaggcaattggaacctgtgctaatccccttacctgatgttaggaatatcttctatcatta +taatcaatcaaatgac---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactattgaggaaatgactaa +ttctaga---ttccctatccctctggaaaagttgtacacgggccccagcagtgctttccaagtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgccgtcagcgtctgctcctt +cagag-----------------------------------------gaagtgtcacccaag----------- +-----------ttggagt------------------------------------------------aa---- +-------cccatg----------------------------------attacaca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgacccaacagaggaaatcccagc +ccctctgggaactccagacttcaaaggaaaaatccaaggtgtgctcacccaaa------------------- +-----ca-----acgaggctgggtggctcgacc--------cgc-----------gcacacaaagctacagt +gagcactggggctgctgacttcactccaaaattgggtagagttcaattccaca---------ctgacacaac +caatgattt---gaacgctaacgagaacacca---------------------------aattcaccccag- +--------tcggcgtcatccaagaaagtgacaa---ccaccgagatgaaccccaacaatgggtgctcccaga +ctacgcaggcaga-ggtacc------cacaatgtgcacttagcccctgccgttgctcccacttttccaggtg +aacaacttctattctttaggtccactctgcccg------ggtgtggcgggta------cccca--------- +--acatggatctggattgcgtgctcccccaggaatgggtgcagcacttctaccaagaagcagccccggcaca +atctgatgtggctttactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaactccataa +atcaggctatgtcacagtggcttacactggtccacatgatttggttattccccccaatggttattttagatt +tgattcttgggttaatcagttttacacacttgcccccatgggaaatggagcggggcgcaaa---------cg +tgcat---------tataatggctggagctgtcattgctggattggcatctgatgtccttagttctggactt +ggttctctgatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaacaacagaaaatta +caacaagactccttccaatttagtagtaacctgcaacaggcttcctttcaacatgacaaagagatgctccga +gctcaaattgaggccactcaaaaattgcaacagggcatgatggaaattaaacaggcaatgctcctaaagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggcactgggctcctaatgctagaaccacaacatacaatgcaggcggtttttccaccccc--------- +ca---------------------gccatcgggggcatc---------------------------------a +ccaggaa----------------gaaccaaccttagggccac------------------------------ +------------------------------tgtccccgctcggggctcttcttc---------------ttc +taaacttt-----------ctagt------------acttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aacagtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctctcaacacgtcattcgtctccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactagtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-taat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>MF140669.1/1-7523 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P4-GII.4/Rotterdam/E1300296_p2_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggaacgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccaccatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagacataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaaatggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaacttgctgacacttgccccctcactctgaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggctaacccagcaccactggattatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaataccccacacggaaaaggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaaaatgtctcaatcaagaaatgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaagaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtaacaggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +accgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtaccacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggggtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggttatccgcac +cacgtgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatctatcccccgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattaatgtccctactgggggaggccgctctccacggccctgcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacccgatgttaggaataatttctaccatta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgtgttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctctggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtagtactaccccccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacatt------cataacgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcaggtctactatgcccg------gttgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcaatacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccagcatgatttggttatccctcccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaagctg +caacaggcttccttccaatttagtagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggagcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatatagtgcaggccgcttttccacccct--------- +ca---------------------accctcgggggtatt---------------------------------a +ccaggaa----------------gagctaatcttagggctat------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttcttttgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctt----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140670.1/1-7453 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300297_p2_d402 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +----------------------gtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gtaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatgc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaatgacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactacgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggatccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctagtcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcgac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcag------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140671.1/1-7535 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E1300301_p3_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattgatc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttgccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgattcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaggaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaggatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagtggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtacttctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttccccaatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttaatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgactttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140672.1/1-7426 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E1300302_p3_d72 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattgatc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttgccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgattcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaggaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaggatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagtggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacaatatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtacttctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttccccaatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttaatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ctggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgct------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140673.1/1-7496 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E1300303_p3_d122 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +--------------------------aac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattgatc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgttgccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgattcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccagtagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaggaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaggatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +aaaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagtggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacaatatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtacttctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttccccaatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttaatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaga----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaattccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ctggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtctaaag------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140674.1/1-7485 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.Pe-GII.4/Rotterdam/E1300308_p4_d0 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +--------------------------------cgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgagacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgactttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caattttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaaatgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaagcccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggtcacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacgggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttc +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttttaccaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttaacagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggc------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140675.1/1-7483 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.Pe-GII.4/Rotterdam/E1300309_p4_d355 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +-----------------------------------ttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcaggcaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcaccttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcgtccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaggacaaagacagcttggcaaccta +catgagaacccttgactttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaggaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacaggatctctggt +ccaagccacagatggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtctctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagaccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagtggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtacttctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttccccaatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttaatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaga----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaattccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ctggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcgaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcg----------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140676.1/1-7475 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.6/Rotterdam/E1300311_p5_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------------------------ccttcggcagccaa---aaatctgccaat +g------ac----agtactaacaccaccccttctaataaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaga----tgctgggtgccgttcccaaggggacc-------------aaaacaccc +agtagtgc----------------tcagcactgccccacagtcaagatcggggacaaaacattaacagttcc +acc-----------------------------cgagcccccaaatgg------tgaggac------gttgtg +cagtatgatg----------cgaagtcagaaactgtgcatggactaccagacttgacgacggt---gcagaa +tgagcacgaaaacacaccgtactctgtccccccattgagtgaaagagaacacagaccagccactgaaccact +tcctggcacaatactggagatgtgggatggtgaattttatcactactctgtgtatgtcagtggcggcaaagc +cctaggagttcacaaaccccctgcagcaataagcctcgcaactatagagctcacgcccatatctctctactg +gaggcccgtttacaccccca---gctacttagtctgcccagacacgctgaaaggcctcgctggtgagaagtt +tccctacacagctttcagtaacaactgttacaacttttgttgctgggtgcttgagctcaacgacacgtggct +tag---caggagaagcatctccaggaccaccggtttcttcaaaccataccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaatcctctgtgcgcttggatcactgttttc +aaaaccaatcaaagacctattgggcaagctcaaaccactaaacttgctgcacctgctcgcatcatgtgattg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---aacgtcttttggacaccgcc +agatgtttccaacttcatatcctccctggtgggcgactttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggcggcgtagggatggttctcggcttcactgctgagaagataggccgtatgct +gtcttccgccgcatcaacgctgcgagcatgcaaagacctggggaattacgcccttgacatactaaagctggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactttaagggcaattgaggacgccgt +cctggacatggaagctatagggaacaatcatcttacaaccctcctcaaggacaaggatagcctctcggccta +catgaagactctggacctggaagaagaaaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccagatccctcctacacaaggctaaagaagaaat +gtttagtagggccaggcccgtggttgttatgatttcgggtaaacctggcattggcaaaacttacatggcaag +acacctagctaagggcgtcgccaacaccatgagtggcgaccaaagagttgggctcgttccgcgtaacggggt +cgaccattgggacgcctacaggggggagagggtggtcttgtgggatgactatggcatggggaaccctatcaa +ggatgctctaacactacaagaactggccgacacttgtccagtcactctaaactgtgataggattgaaaacaa +agggaagatgttcgacagtgatgtcattgtaatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggaggattgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagacttccctggccaacctgacatgtggaaagaccatttcaaatcagacttctcccacataaagctga +ctctggctccccagggcggattcgacaagaatggcaacaccccacatggtaggggcaccatgcgatccctga +cccaggggtccctgatcgcaagggtcgcgggtcttgttcatgagaggaaagatgagttccagctccaaggga +acgacctccaaacatacaactttgacaccaacagggtctccgcatttaggagactagccgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctaaaggttg +ccctgagggatgtgaagttcaacgagtgtcagataatttacaagagctccaaatatcgaatctcttccaatg +gcaaaggttctgtctctattgataaggttggggatcaggtgtcccagactgcaagtgaagtgggttcagcaa +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactttgatac +aggttgccggagcatcattcgttgtta---------------gcagaa------tctccaagaggttctgtt +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----gaagg +aagtagtccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacggctttctccagcaaaggtctgagtgatgaggagtatgacgagtaca +agaggatcagggaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttttgtgaggaagaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcaccggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaaactgtgggcagacgactccagaagtgtggact +acaacgagagacttgacttcgaggctcccccgagcgtctggtcgagaatagttccattgggcactggatggg +gcttctgggtttcat-ccaatctcctgatcacaacaacacacgtcctgcctaaggggatcaaggaacttttt +ggagttgaactcaaacagatccaaattcataagtctggagaattttgcaggttcaggttcccaagaccaatt +aggccagatgtcacagggctcgtgctggaggagggcgctccagaaggcaccgtctgttccatactcgtgaag +agacctacaggtgaaatgatccccctggcagtgaggatgggcacacatgcgtccatgaagatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccataccgcagca +gcccgggggggcaacactgtcatatgtgccacccagggacaagatggggaggcagtccttgagggaaatgag +gaccttggcacttactgcggtgccccaattctgggcccaggcaaagcacccaaactcagcgcgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacctatgagcctgcctatctggggggtaaggacccc +agagtggaaaaaggaccatctctacaacaagtcatgagggatcagctaaaaccttttacagaacccaggggt +aaacctcctagacctgcaatcttggaagaagccaaaaagacagttatgaatgttctagaacaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcttcactggacaagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccactggaatggagaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtatacacggccgcgctcaaagacgagcttgttaag +actgataagatctacaaaaagataaagaagaggctcttgtgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagagtggggatg +aacgtgaatgaggatggtcctatcatatttgacaagcactctaagtacaggtaccactatgatgctgactat +t-ctagatgggattccacccagcaaaggtgcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgagccagagct-ggcgcaagtggttgcagaggatctactagcacccagccaactagacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccgtgcacatcacaatggaactcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tcattttacggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagaatatggtctggtccccacccgacctgacaaaactgaaggtccccttgtaatcactgaagacctcacc +ggcctgacgttcttgcgtaggtcaattgtgagagatccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagttatactggacaaggggccccaatcatgagaatccatacgagagcatggtccctcataac +cagcgggcaacacagctcatggcccttctaggtgaggctgcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaaaagtggtggtctggaattttatgtgcccagacatgaggccatgttt +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggtcaacaatga +ggttatggcacttgaaccggtggcgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcatcaaggaacacaaccgg +tgaggtacttctgaatcttgaattaggccctgagctcaacccttatctgagacatttgtcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtgatcctagctgggaatgcgttcgcagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgtagaaaatattagtgcagcccaaatcacaatgttcccccatgt +agttattgatgtaagacagcttgagccagtgcttttacccctccctgacataaggaataggttctttcatta +caatcaggaaaacact---tccagaatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatatgtttacggtgtcttgcagagtcctgacccgtccagcccctgactttgagttcacgtttct +ggtgccgccaactgtagaatcaaagactaagcccttcacactcccaattctaactcttggagaactatctaa +ttctaga---ttccctgccccaatagacatgctgtacataaatcccagtgagacaattgtggtgaggtcaca +aaatggccggtgtcttctggacggaacacttcaagggaccacccagctggcgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctggttcgccag--------- +----------gagtcgaggtct------gc----------------------------agattcagtag--- +--actcagctaga--------cgagcaatga----------------accatcct----------------- +----------ctctacgttcagctgaggaacctcgatgggacatcatatgatccaacagatgaggtgccagc +ggttctgggtgccatagattttaaaggaactgtgtttgggatcgctagtcaaa---gggacaccaaagg--- +-----ct---ctgtagga---------gcgacc--------cgc-----------gcccatgaagtgacaat +aaacaccagagatgctaaatactctccaaaacttggctctgtgttgat---gt---------attctgaatc +tactgattt---tacaagtgaccagcccatcc---------------------------gcttcactccta- +--------ttggtatgggggaggaa------------------aatgattgggaccaatgggatttgcctga +ttattctggcagc-ctcacc------ctcaacatgcacctagcccccgcagttgcccctgctttccctggtg +agcgcattctcttctttagatcaatagtgccag------ctgctggtggtta------tggga--------- +--aaggtgaaatagattgcctcatcccacaggaatggattcagcatttctaccaggaggccgccccaataca +atccgcggtggcccttattagatatgttaatcctgacactgggagaaacctctttgaggcaaagctacatag +agaagggttcatcactgtggcaagttctggagacaaccccatagttgtgccctcaaatggctacttcagatt +tgaggcttgggttaatcaattctacacactcacccccatgggagctggacaggggcgcaaa---------ag +agccc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccaaaaagtagagtatgacttcaataaacaa--- +------------------------------ctccaattggcatcctttcaacatgacaaagagatgttgcag +tcacaagttctggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtgaacgcgccgatgacaaaaattctggattggaatgga +acgaggtattttgccccaaacagtatgaagacaaccagttattcagg-ccagctccccagtagccctgtgca +ta-----------agcaatccacactaccc---cgtcccagccc---------------------------t +tcaa-------------------aaactaatgttagt----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttctgctctctcac----------------- +---------------------aatcaactca---ttcaacggttttgactg-------cggg--------gt +ccgggtc----g---tctag-------------------gacaccttcctctt---------cctcaacagc +ttccac-------------------ctt--------------gtctagaactagtgattgggtaagaggaca +aaatgagaggctcagcccgtttatga---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcactc +acattcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140677.1/1-7480 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P7-GII.6/Rotterdam/E1300312_p5_d204 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------------------------ccttcggcagccaa---aaatctgccaat +g------ac----agtactaacaccaccccttctaataaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaga----tgctgggtgccgttcccaaggggacc-------------aaaacaccc +agtagtgc----------------tcagcactgccccacagtcaagatcggggacaaaacattaacagttcc +acc-----------------------------cgagcccccaaatgg------tgaggac------gttgtg +cagtatgatg----------cgaagtcagaaactgtgcatgggctaccagacttgacgacggt---gcagaa +tgagcacgaaaacacaccgtactctgtccccccattgagtgaaagagaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattttatcactactccgtgtatgtcagtggcggcaaagc +cctaggagttcacaaaccccctgcagcaataagcctcgcaactatagagctcacgcccatatctctttactg +gaggcccgtttacaccccca---gctacttagtctgcccagacacgctgaaaggcctcgctggtgagaagtt +tccctacacagctttcagtaacaactgttacaacttttgttgctgggtgcttgagctcaacgatacgtggct +tag---caggagaagcatctccagaaccaccggtttcttcaaaccataccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagattaagaaggtggccaacgcaatcctctgtgcgcttggatcactgtttac +aaaaccaatcaaagacctattgggaaagctcaaaccactaaatttgctgcacctgctcgcatcatgtgattg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatatcctccttggtgggcgactttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcgtagggatggttctcggcttcactgctgagaagataggccgtatgct +gtcttccgccgcatcaacgctgcgagcatgcaaagacctggggaattacgcccttgacatactaaagctggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactttaagggcaattgaggacgccgt +cctggacatggaagctatagggaacaatcatcttacaaccctcctcaaggacaaggatagcctctcggccta +catgaagactctggacctggaagaagaaaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccagatccctcctacacaaggctaaagaagaaat +gtttagtagggccaggcccgtggttgttatgatttcgggcaaacctggcattggcaaaacttacatggcaag +acacctagctaagggcgtcgccaacaccatgagtggcgaccaaagagttgggctcgttccgcgcaacggggt +cgaccattgggacgcctacaggggggagagggtggtcttgtgggatgactatggcatggggaaccctatcaa +ggatgctctaacactacaagaattggccgacacttgtccagtcactctaaactgtgataggattgaaaacaa +agggaagatgttcgacagtgatgtcattgtaatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggaggattgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagacttccctggccaacctgacatgtggaaagaccatttcaaatcagacttctcccacataaagctga +ctctggctccccagggcggattcgacaagaatggcaacaccccacatggtaggggcaccatgcgatccctga +cccaggggtccctgatcgcaagggtcgcgggtcttgttcatgagaggaaagatgagttccagctccaaggga +acgacctccaaacatacaactttgacaccaacagggtctccgcatttaggagactagccgcagacaacaaat +atgggatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctaaaggttg +ccctgagggatgtgaagttcaacgagtgtcagataatttacaggagctccaaatatcgaatctcttccaatg +gcaaaggctctgtctctattgataaagttggggatcaagtgtcccagactgcaagtgaagtgggttcagcaa +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactttgatac +aggttgccggagcatcattcgttgtta---------------gcagaa------tctccaagaggttctgtt +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----gaagg +aagtagtccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacggctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttttgtgaggaagaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcaccggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaaactgtgggcagacgacaccagaaatgtggact +ataacgagagacttgactttgaggctcccccgagcgtctggtcgagaatagttccattgggcactggatggg +gcttctgggtttcgt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggatcaaggaacttttt +ggagttgaactcaaacagatccaaattcataagtctggagaattttgcaggttcaggttcccaagaccaatt +aggccagatgtcacagggctcgtgctggaggaaggcgctccagaaggcaccgtctgttccatactcgtgaag +agacctacaggtgaaatgatccccctagcagtgaggatgggcacacatgcgtccatgaagatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccacccagggacaagatggggaggcagtccttgagggaaatgag +gaccttggcacttactgcggtgccccaattctgggcccaggcaaagcacccaaactcagtgcgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacctatgagcctgcctatctggggggtaaggacccc +agagtggagaaaggaccatctctgcaacaagtcatgagggatcagctaaaacctttcacagaacccaggggt +aaacctcctagacctgcaatcttagaagaagccaaaaagacagttatgaatgtactagaacaaaccattgat +cctgctaaaccatggacctattcccaagcatgtgcttcactggacaagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccattggaatggagaatctttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtatacacggccgcgctcaaagacgagcttgttaag +actgataagatctacaaaaagataaagaagagactcttgtgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagagtggggatg +aacgtgaatgaggatggtcctatcatatttgacaagcactctaagtacaagtaccactatgatgctgactat +t-ctagatgggattccacccagcaaaggtgcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgagccagagct-ggcgcaagtggttgcagaggatctactagcacccagccaactagacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccgtgcacatcacagtggaactcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttacggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagaatatggtctggtccccacccgacctgacaaaactgaaggtccccttgtaatcactgaagacctcacc +ggcctgacgttcttgcgtaggtcaattgtgagagatccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagttatactggacaaggggccccaatcatgagaatccatacgagagcatggtccctcataac +cagcgggcaacacagctcatggcccttctaggtgaggctgcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaaaagtggtggtctggaattttatgtgcccagacatgaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggtcaacaatga +ggttatggcacttgaaccggtggcgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcatcaaggaacacaaccgg +tgaggtacttctgaatcttgaattaggccctgagctcaacccttatctgagacatttgtcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtgatcctagctgggaatgcgttcgcagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgtagaaaatattagtgcagcccaaatcacaatgttcccccatgt +agttattgatgtaagacagcttgagccagtgcttttacccctccctgacataaggaataggttctttcatta +caatcaggaaaacact---tccagaatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatatgtttacggtgtcttgcagagtcctgacccgtccagcccctgactttgagttcacgtttct +ggtgccgccaactgtagaatcaaagactaagcccttcacactcccaattctaactcttggagaactatctaa +ttctaga---ttccctgccccaatagacatgctgtacataaatcccagtgagacaattgtggtgaggtcaca +aaatggccggtgtcttctggacggaacacttcaagggaccacccagctggcgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctggttcgccag--------- +----------gagtcgaggtct------gc----------------------------agattcagtag--- +--actcagctaga--------cgagcaatga----------------accatcct----------------- +----------ctctacgttcagctgaggaacctcgatgggacatcatatgatccaacagatgaggtgccagc +ggttctgggtgccatagattttaaaggaactgtgtttgggatcgctagtcaaa---gggacaccaaagg--- +-----ct---ctgtagga---------gcgacc--------cgc-----------gcccatgaagtgacaat +aaacaccagagatgctaaatactctccaaaacttggctctgtgttgat---gc---------attctgaatc +tactgattt---tacaagtgaccagcccatcc---------------------------gctttactccta- +--------ttggtatgggggaggaa------------------aatgattggagccaatgggatttgcctga +ttattctggtgcc-ctcacc------ctcaacatgcacctagcccccgcagttgcccctgctttccctggtg +agcgcattctcttctttagatcagtggtgccag------ctgctggtggtta------tggaa--------- +--aaggtgaaatagattgtctcatcccacaggaatggattcagcatttctaccaggaggccgccccaataca +atccgcggtggcccttattagatatgttaatcctgacactgggagaagcctctttgaggcaaagctacatag +agaagggttcatcactgtggcaagttctggagacaaccccatagttgtgccctcaaatggctacttcagatt +tgaggcttgggttaatcaattctacacactcacccccatgggagctggacaggggcgcaaa---------ag +agccc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccaaaaggtagagtatgacttcaataaacaa--- +------------------------------ctccaattggcatcctttcaacatgacaaagagatgttgcag +tcacaagttctggccactaaacagctccaacaggagatgatgaacataaagcaaggggtcttgaccgctggc +ggcttttcccctacagatgctgcaagaggcgctgtgaacgcgccgatgacaaaaattctggattggaatgga +acgaggtattttgccccaaacagtatgaagacaaccagttattcagg-ccagctctccagtaaccctgtaca +ta-----------agcaatccacactaccc---cgtcccagccc---------------------------t +tcaa-------------------aaactaatgttagt----------------------------------- +----------------------------------------------------------------------ag +tggttctt-----------ctagtgtgtatagttctttatcttctgcttcctcac----------------- +---------------------aatcaactca---ttcaacggttttgactg-------cggg--------at +ccgggtc----g---tctag-------------------gacagctccctcct---------cctcaacagc +ttccac-------------------ctt--------------gtctagaactagtgattgggtaagaggaca +aaatgagaggctcagcccgtttatga---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggactcctatgt------------tcaataccaataggcagcctctcttcactc +acattcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140678.1/1-7480 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.P7-GII.6/Rotterdam/E1300313_p5_d308 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------------------------ccttcggcagccaa---aaatctgccaat +g------ac----agtactaacaccaccccttctaataaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaga----tgctgggtgccgttcctaaggggacc-------------aaaacaccc +agtagtgc----------------tcagcactgccccacagtcaagatcggggacaaaacattaacagttcc +acc-----------------------------cgagcccccaaatgg------tgaggac------gttgtg +cagtatgatg----------cgaagtcagaaactgtgcatggactaccagacttgacgacggt---gcagaa +tgagcacgaaaacacaccgtactctgtccccccattgagtgaaagagaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattttatcactactccgtgtatgtcagtggcggcaaagc +cctaggagttcacaaaccccctgcagcaataagcctcgcaactatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---gctacttagtctgcccagacacgctgaaaggcctcgctggtgagaagtt +tccctacacagctttcagtaacaactgttacaacttttgttgctgggtgcttgagctcaacgatacgtggct +tag---caggagaagcatctccagaaccaccggtttcttcaaaccataccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagattaagaaggtggccaacgcaatcctctgtgcgcttggatcactgtttac +aaaaccaatcaaagacctattgggaaagctcaaaccactaaatttgctgcacctgctcgcatcatgtgattg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatatcctccttggtgggcgactttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcgtagggatggttctcggcttcactgctgagaagataggccgtatgct +gtcttccgccgcatcaacgctgcgagcatgcaaagacctggggaattacgcccttgacatactaaagctggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactttaagggcaattgaggacgccgt +cctggacatggaagctatagggaacaatcatcttacaaccctcctcaaggacaaggatagcctctcggccta +catgaagactctggacctggaagaagaaaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccagatccctcctacacaaggctaaagaagaaat +gtttagtagggccagacccgtggttgttatgatttcgggcaaacctggcattggcaaaacttacatggcaag +acacctagctaagggcgtcgccaacaccatgagtggcgaccaaagagttgggctcgttccgcgcaacggggt +cgaccattgggacgcctacaggggggagagggtggtcttgtgggatgactacggcatggggaaccctatcaa +ggatgctctaacattacaagaattggccgacacttgtccagtcactctaaactgtgataggattgaaaacaa +agggaagatgttcgacagtgatgtcattgtaatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggaggattgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagacttccctggccaacctgacatgtggaaagaccatttcaaatcagacttctcccacataaagctga +ctctggctccccagggcggatttgacaagaatggcaacaccccacatggtaggggcaccatgcgatccctga +cccaggggtccctgatcgcaagggtcgcgggtcttgttcatgagaggaaagatgagttccagctccaaggga +acgacctccaaacatacaactttgacaccaacagggtctccgcatttaggagactagccgcagacaacaaat +atgggatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctaaaggttg +ccctgagggatgtgaagttcaacgagtgtcagataatttacaggagctccaaatatcgaatctcttccaatg +gcaaaggctctgtctctattgataaagttggggatcaggtgtcccagactgcaagtgaagtgggttcagcaa +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagacctcatctacactttgatac +aggttgccggagcatcattcgttgtta---------------gcagaa------tctccaagaggttttgtt +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----gaagg +aagtagtccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacggctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttttgtgaggaagaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcaccggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaaactgtgggcagacgacaccagaaatgtggact +ataacgagagacttgactttgaggctcccccgagcgtctggtcgagaatagttccattgggcactggatggg +gcttctgggtttcgt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggatcaaggaacttttt +ggagttgaactcaaacagatccaaattcataagtctggagaattttgcaggttcaggttcccaagaccaatt +aggccagatgtcacagggctcgtgctggaggaaggcgctccagaaggcaccgtctgttccatactcgtgaag +agacctacaggtgaaatgatccccctagcagtgaggatgggcacacatgcgtccatgaagatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccacccagggacaagatggggaggcagtccttgagggaaatgag +gaccttggcacttactgcggtgccccaattctgggcccaggcaaagcacccaaactcagtgcgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacctatgagcctgcctatctggggggtaaggacccc +agagtggagaaaggaccatctctgcaacaagtcatgagggatcagctaaaacctttcacagaacccaggggt +aaacctcctagacctgcaatcttagaagaagccaaaaagacagttatgaatgtactagaacaaaccattgat +cctgctaaaccatggacctattcccaagcatgtgcttcactggacaagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccattggaatggagaatctttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagacgagcttgttaag +actgataagatctataaaaagataaagaagagactcttgtgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagagtggggatg +aacgtgaatgaggatggtcctatcatatttgacaagcactctaagtacaagtaccactatgatgctgactat +t-ctagatgggattccacccagcaaaggtgcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgagccagagct-ggcgcaagtggttgcagaggatctactagcacccagccaactagacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccgtgcacatcacagtggaactcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttacggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagaatatggtctggtccccacccgacctgacaaaactgaaggtccccttgtaatcactgaagacctcacc +ggcctgacgttcttgcgtaggtcaattgtgagagatccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagctatattggacaaggggccccaatcatgagaatccatacgagagcatggtccctcataac +cagcgggcaacacagctcatggcccttctaggtgaggctgcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaaaagtggtggtctggaattttatgtgcccagacatgaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggtcaacaatga +ggttatggcacttgaaccggtggcgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcatcaaggaacacaaccgg +tgaggtacttctgaatcttgaattaggccctgagctcaacccttatctgagacatttgtcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtgatcctagctgggaatgcgttcgcagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgtagaaaatattagtgcagcccaaatcacaatgttcccccatgt +agttattgatgtaagacagcttgagccagtgcttttacccctccctgacataaggaataggttctttcatta +caatcaggaaaacact---tctagaatgagacttgtggctatgttgtacacaccccttagggc---aaattc +tggtgaggatatgtttacggtgtcttgcagagtcctgacccgtccagcccctgactttgagttcacgtttct +ggtgccgccaactgtagaatcaaagactaagccctttacactcccaattctaactcttggagaactatctaa +ttctaga---ttccctgccccaatagacatgctgtacataaatcccagtgagacaattgtggtgaggtcaca +aaatggccggtgtcttctggacggaacacttcaagggaccacccagctggcgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctggttcgccag--------- +----------gagtcgaggtct------gc----------------------------agattcagtag--- +--actcagctaga--------cgagcaatga----------------accatcct----------------- +----------ctctacgttcagctgaggaacctcgatgggacatcatatgatccaacagatgaggtgccagc +ggttctgggtgccatagattttaaaggaactgtgtatggggtcgctagtcaaa---gggacaccaaagg--- +-----ct---ctgtagga---------gcgacc--------cgc-----------gcccatgaagtgacaat +aaacaccagagatgctaaatactctccaaaacttggctctgtgttgat---gc---------attctgaatc +cactgattt---cttcagtgaccagcccatcc---------------------------gctttactccta- +--------ttggtatgggggaggaa------------------aatgattggagccaatgggatttgcctga +ttattctggtgcc-ctcacc------ctcaacatgcacctagcccccgcagttgcccctgctttccctggtg +agcgcattctcttctttagatcagtggtgccag------ctgctggtggtta------tggaa--------- +--aaggtgaaatagactgtctcatcccacaggaatggattcagcatttctaccaggaggccgccccaacaca +atccgcggtggcccttattagatatgttaatcctgacactgggagaagcctctttgaggcaaagctacatag +agaagggttcatcactgtggcaagttctggagacaaccccatagttgtgccatcaaatggctacttcagatt +tgaggcttgggttaatcaattctatacactcacccccatgggagctggacaggggcgcaaa---------ag +agccc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccaaaaggtagagtatgacttcaataaacaa--- +------------------------------ctccaattggcatcctttcaacatgacaaagagatgttgcag +tcacaagttctggccactaaacagctccaacaggagatgatgaacataaagcaaggggtcttgaccgctggc +ggcttttcccctacagatgctgcaagaggcgctgtgaacgcgccgatgacaaaaattctggattggaatgga +acgaggtattttgccccaaacagtatgaagacaaccagttattcagg-ccagctctccagtaaccctgtaca +ta-----------agcaatccacactaccc---cgtcccagccc---------------------------t +tcaa-------------------aaactaatgttagt----------------------------------- +----------------------------------------------------------------------ag +tggttctt-----------ctagtgtgtatagttctttatcttctgcttcctcac----------------- +---------------------aatcaactca---ttcaacggttttgactg-------cggg--------at +ccgggtc----g---tctag-------------------gacagctccctcct---------cctcaacagc +ttccac-------------------ctt--------------gtctagaactagtgattgggtaagaggaca +aaatgagagactcagcccgtttatga---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggactcctatgt------------tcaataccaataggcagcctctcttcgctc +acattcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140679.1/1-7480 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.P7-GII.6/Rotterdam/E1300314_p5_d328 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------------------------ccttcggcagccaa---aaatctgccaat +g------ac----agtactaacaccaccccttctaataaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaga----tgctgggtgccgttcctaaggggacc-------------aaaacaccc +agtagtgc----------------tcagcactgccccacagtcaagatcggggacaaaacattaacagttcc +acc-----------------------------cgagcccccaaatgg------tgaggac------gttgtg +cagtatgatg----------cgaagtcagaaactgtgcatggactaccagacttgacgacggt---gcagaa +tgagcacgaaaacacaccgtactctgtccccccattgagtgaaagagaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattttatcactactccgtgtatgtcagtggcggcaaagc +cctaggagttcacaaaccccctgcagcaataagcctcgcaactatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---gctacttagtctgcccagacacgctgaaaggcctcgctggtgagaagtt +tccctacacagctttcagtaacaactgttacaacttttgttgctgggtgcttgagctcaacgatacgtggct +tag---caggagaagcatctccagaaccaccggtttcttcaaaccataccagtcttggaacaggaaacccct +tccaaccgttgatgatggaaagattaagaaggtggccaacgcaatcctctgtgcgcttggatcactgtttac +aaaaccaatcaaagacctattgggaaagctcaaaccactaaatttgctgcacctgctcgcatcatgtgattg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatatcctccttggtgggcgactttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcgtagggatggttctcggcttcactgctgagaagataggccgtatgct +gtcttccgccgcatcaacgctgcgagcatgcaaagacctggggaattacgcccttgacatactaaagctggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactttaagggcaattgaggacgccgt +cctggacatggaagctatagggaacaatcatcttacaaccctcctcaaggacaaggatagcctctcggccta +catgaagactctggacctggaagaagaaaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccagatccctcctacacaaggctaaagaagaaat +gtttagtagggccagacccgtggttgttatgatttcgggcaaacctggcattggcaaaacttacatggcaag +acacctagctaagggcgtcgccaacaccatgagtggcgaccaaagagttgggctcgttccgcgcaacggggt +cgaccattgggacgcctacaggggggagagggtggtcttgtgggatgactacggcatggggaaccctatcaa +ggatgctctaacattacaagaattggccgacacttgtccagtcactctaaactgtgataggattgaaaacaa +agggaagatgttcgacagtgatgtcattgtaatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggaggattgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagacttccctggccaacctgacatgtggaaagaccatttcaaatcagacttctcccacataaagctga +ctctggctccccagggcggatttgacaagaatggcaacaccccacatggtaggggcaccatgcgatccctga +cccaggggtccctgatcgcaagggtcgcgggtcttgttcatgagaggaaagatgagttccagctccaaggga +acgacctccaaacatacaactttgacaccaacagggtctccgcatttaggagactagccgcagacaacaaat +atgggatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctaaaggttg +ccctgagggatgtgaagttcaacgagtgtcagataatttacaggagctccaaatatcgaatctcttccaatg +gcaaaggctctgtctctattgataaagttggggatcaggtgtcccagactgcaagtgaagtgggttcagcaa +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagacctcatctacactttgatac +aggttgccggagcatcattcgttgtta---------------gcagaa------tctccaagaggttttgtt +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----gaagg +aagtagtccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacggctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagagaggaacggaaagtactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcaacagaggaggacttttgtgaggaagaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcaccggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaaactgtgggcagacgacaccagaaatgtggact +ataacgagagacttgactttgaggctcccccgagcgtctggtcgagaatagttccattgggcactggatggg +gcttctgggtttcgt-ccaatctcctgatcacaacaacacacgtcctgcctaaggggatcaaggaacttttt +ggagttgaactcaaacagatccaaattcataagtctggagaattttgcaggttcaggttcccaagaccaatt +aggccagatgtcacagggctcgtgctggaggaaggcgctccagaaggcaccgtctgttccatactcgtgaag +agacctacaggtgaaatgatccccctagcagtgaggatgggcacacatgcgtccatgaagatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccacccagggacaagatggggaggcagtccttgagggaaatgag +gaccttggcacttactgcggtgccccaattctgggcccaggcaaagcacccaaactcagtgcgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacctatgagcctgcctatctggggggtaaggacccc +agagtggagaaaggaccatctctgcaacaagtcatgagggatcagctaaaacctttcacagaacccaggggt +aaacctcctagacctgcaatcttagaagaagccaaaaagacagttatgaatgtactagaacaaaccattgat +cctgctaaaccatggacctattcccaagcatgtgcttcactggacaagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccattggaatggagaatctttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtgtacacggccgcgctcaaagacgagcttgttaag +actgataagatctataaaaagataaagaagagactcttgtgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagagtggggatg +aacgtgaatgaggatggtcctatcatatttgacaagcactctaagtacaagtaccactatgatgctgactat +t-ctagatgggattccacccagcaaaggtgcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgagccagagct-ggcgcaagtggttgcagaggatctactagcacccagccaactagacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccgtgcacatcacagtggaactcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttacggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagaatatggtctggtccccacccgacctgacaaaactgaaggtccccttgtaatcactgaagacctcacc +ggcctgacgttcttgcgtaggtcaattgtgagagatccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagctatattggacaaggggccccaatcatgagaatccatacgagagcatggtccctcataac +cagcgggcaacacagctcatggcccttctaggtgaggctgcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaaaagtggtggtctggaattttatgtgcccagacatgaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggtcaacaatga +ggttatggcacttgaaccggtggcgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcatcaaggaacacaaccgg +tgaggtacttctgaatcttgaattaggccctgagctcaacccttatctgagacatttgtcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtgatcctagctgggaatgcgttcgcagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgtagaaaatattagtgcagcccaaatcacaatgttcccccatgt +agttattgatgtaagacagcttgagccagtgcttttacccctccctgacataaggaataggttctttcatta +caatcaggaaaacact---tctagaatgagacttgtggctatgttgtacacaccccttagggc---aaattc +tggtgaggatatgtttacggtgtcttgcagagtcctgacccgtccagcccctgactttgagttcacgtttct +ggtgccgccaactgtagaatcaaagactaagccctttacactcccaattctaactcttggagaactatctaa +ttctaga---ttccctgccccaatagacatgctgtacataaatcccagtgagacaattgtggtgaggtcaca +aaatggccggtgtcttctggacggaacacttcaagggaccacccagctggcgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctggttcgccag--------- +----------gagtcgaggtct------gc----------------------------agattcagtag--- +--actcagctaga--------cgagcaatga----------------accatcct----------------- +----------ctctacgttcagctgaggaacctcgatgggacatcatatgatccaacagatgaggtgccagc +ggttctgggtgccatagattttaaaggaactgtgtatggggtcgctagtcaaa---gggacaccaaagg--- +-----ct---ctgtagga---------gcgacc--------cgc-----------gcccatgaagtgacaat +aaacaccagagatgctaaatactctccaaaacttggctctgtgttgat---gc---------attctgaatc +cactgattt---cttcagtgaccagcccatcc---------------------------gctttactccta- +--------ttggtatgggggaggaa------------------aatgattggagccaatgggatttgcctga +ttattctggtgcc-ctcacc------ctcaacatgcacctagcccccgcagttgcccctgctttccctggtg +agcgcattctcttctttagatcagtggtgccag------ctgctggtggtta------tggaa--------- +--aaggtgaaatagactgtctcatcccacaggaatggattcagcatttctaccaggaggccgccccaacaca +atccgcggtggcccttattagatatgttaatcctgacactgggagaagcctctttgaggcaaagctacatag +agaagggttcatcactgtggcaagttctggagacaaccccatagttgtgccatcaaatggctacttcagatt +tgaggcttgggttaatcaattctatacactcacccccatgggagctggacaggggcgcaaa---------ag +agccc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccaaaaggtagagtatgacttcaataaacaa--- +------------------------------ctccaattggcatcctttcaacatgacaaagagatgttgcag +tcacaagttctggccactaaacagctccaacaggagatgatgaacataaagcaaggggtcttgaccgctggc +ggcttttcccctacagatgctgcaagaggcgctgtgaacgcgccgatgacaaaaattctggattggaatgga +acgaggtattttgccccaaacagtatgaagacaaccagttattcagg-ccagctctccagtaaccctgtaca +ta-----------agcaatccacactaccc---cgtcccagccc---------------------------t +tcaa-------------------aaactaatgttagt----------------------------------- +----------------------------------------------------------------------ag +tggttctt-----------ctagtgtgtatagttctttatcttctgcttcctcac----------------- +---------------------aatcaactca---ttcaacggttttgactg-------cggg--------at +ccgggtc----g---tctag-------------------gacagctccctcct---------cctcaacagc +ttccac-------------------ctt--------------gtctagaactagtgattgggtaagaggaca +aaatgagagactcagcccgtttatga---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggactcctatgt------------tcaataccaataggcagcctctcttcgctc +acattcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140680.1/1-7489 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.P7-GII.6/Rotterdam/E1300315_p5_d441 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-------------------------------------------ccttcggcagtcaa---aaatctgccaat +g------ac----agtactaacaccaccccttctaataaagaagaggc------tggtgcattctccaacat +taaagttggttttaagaaga----tgctgggtgccgttcccaaggggacc-------------aaaacaccc +agtagtgc----------------tcagcactgccccacagtcaagatcggggacaaaacattaacagttcc +acc-----------------------------cgagcccccaaatgg------tgaggac------gttgtg +cagtatgatg----------cgaagtcagaaactgtgcatggactaccagacttgacgacggt---gcaaaa +tgagcacgaaaacacaccgtactctgtccccccattgagtgaaagagaacacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattttatcactactccgtgtatgtcagtggcggcaaagc +cctaggagttcacaaaccccctgcagcaataagcctcgcaactatagagctcacgcccatatctctttactg +gaggcccgtttacaccccca---gctacttagtctgcccagacacgctgaaaggcctcgctggtgagaagtt +tccctacacagctttcagtaacaactgttacaacttttgttgctgggtgcttgagctcaacgacacgtggct +tag---caggagaagcatctccagaaccaccggtttcttcaaaccataccaatcttggaacaggaaacccct +tccaaccgttgatgatggaaagattaagaaggtggccaacgcaatcctctgtgcgcttggatcactgttttc +aaaaccaatcaaagacctattgggaaagctcaaaccactaaacttgctgcacctgctcgcatcatgtgattg +gacgtttgcgggtgtagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccaacttcatatcctccctggtgggcgactttgaactgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggcggcgtagggatggttctcggcttcactgctgagaagataggccgtatgct +gtcttccgccgcatcaacgctgcgagcatgcaaagacctggggaattacgcccttgacatactaaagctggt +tatgaagtggttcttcccaaagaaagaagagaaggccgagatggaaactttaagggcaattgaagacgccgt +cctggacatggaagctatagggaacaatcatcttacaaccctcctcaaggacaaggatagcctctcggccta +catgaagactctggacctggaagaagaaaaggcaaggaagctgtccaccaagtcatcctcgccagacattgt +cggcactatcaatgccatactggccagaatagctgctgccagatccctcctacacaaggctaaagaagaaat +gtttagtagggccaggcccgtggttgttatgatctcgggtaaacctggcattggcaagacttacatggcaag +acacctagctaagggcgtcgccaacaccatgagtggcgaccaaagagttgggctcgttccgcgcaacggggt +cgaccattgggacgcctacaggggggagagggtggtcttgtgggatgactatggcatggggaaccccatcaa +ggatgctctaacactacaagaattggccgacacttgtccagtcactctaaactgtgataggattgaaaacaa +agggaagatgttcgacagtgatgtcattgtaatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccaggaggattgactttctggtctatgcagagtcaccagagattgagaaagtta +agagagacttccctggccaacctgacatgtggaaagaccatttcaaatcagacttctcccacataaagctga +ctctggctccccagggcggattcgacaagaatggcaacaccccacatggtaggggcaccatgcgatccctga +cccaggggtccctgatcgcaagggtcgcgggtcttgttcatgagaggaaagatgagttccagctccaagggg +gcgacctccaaacatacaactttgacaccaacagggtctccgcatttaggagactagccgcagacaacaaat +atgggatcatggaaacaatgagagtgggtgcggcgcttaagaatgtcaagaccttggaagatctaaaggttg +ccctgagggatgtgaagttcaacgagtgtcagataatttacaagagctccaaataccgaatctcttccaatg +gcaaaggttgtgtcactattgataaagttggggatcaagtgtcccagactgcaagtgaagtgggttcagcaa +tccttagactcaggcaggcaagggccagatactatgtcagctgcttccaagatctcatctacactttgatgc +aggttgctggagcatcattcgttgtta---------------gcagaa------tctccaagaggttctgtt +gggagaggtgggtcaaaccaaccgagac-------------ccaggaaacgaatgaatccga-----gaagg +aagtagtccaaggtg---gatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacggctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttttgtgaggaagaggaggccaagataagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcaccggctcagaca +tcaggaagaggagaccagacgatttccaaccaaagggcaaactgtgggcagacgactccagaagtgtggact +acaacgagagacttgacttcgaggctcccccgagcgtctggtcgagaatagttccattgggcactggatggg +gcttctgggtttcat-ccaatctcctgatcacaacaacacacgtcctgcctaaggggatcaaggaacttttt +ggagttgaactcaaacagatccaaattcataagtctggagaattttgcaggttcaggttcccaagaccaatt +aggccagatgtcacagggctcgtgctggaggagggcgctccagaaggcaccgtctgttccatactcgtgaag +agacctacaggtgaaatgatccccctagcagtgaggatgggcacacatgcgtccatgaagatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaacgacatagttgtcgcgggtgtccataccgcagca +gcccgggggggcaacactgtcatatgtgccacccagggacaagatggggaggcagtccttgagggaaatgag +gaccttggcacttactgcggtgccccaattctgggcccaggcaaagcacccaaactcagcgcgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacctatgagcctgcctatctggggggtaaggacccc +agagtggaaaaaggaccatctctacaacaagtcatgagggatcagctaaaaccttttacagaacccaggggt +aaacctcctagacctgcaatcttagaagaagccaaaaagacagttatgaatgttctagaacaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcttcactggacaagaccacttccagtggtagcccccac +catgtcaggaaaaatgaccactggaatggagaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtatgaacaggccaaacatgtgcagcccgtatacacggccgcgctcaaagacgagcttgttaag +actgataagatctacaaaaagataaagaagaggctcttgtgggggtcggaccttggcacgatgatcaggtgc +gccagggcttttggtggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagagtggggatg +aacgtgaatgaggatggtcctatcatatttgacaagcactctaagtacaggtaccactatgatgctgactat +t-ctagatgggattccacccagcaaaggtgcattctctcggccgctatggaagtgatgg-tgcggttttctg +ccgagccagagct-ggcgcaagtggttgcagaggatctactagcacccagccaactagacgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggggtcccgtgcacatcacagtggaactcaatagcacattgg +atcctaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcttgtttt +tccttttacggcgatgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agagaatatggtctggtccccacccgacctgacaaaactgaaggtccccttgtaatcactgaagacctcacc +ggcctgacgttcttgcgtaggtcaattgtgagagatccagctgggtggtttggaaaattggaccaagactca +atcctcaggcagttatactggacaaggggccccaatcatgagaatccatacgagagcatggtccctcataac +cagcgggcaacacagctcatggcccttctaggtgaggctgcactgcatggccctcagttttacaagaaagtt +agcaaaatggtcatcaatgaaattaaaagtggtggtctggaattttatgtgcccagacatgaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggtcaacaatga +ggttatggcacttgaaccggtggcgggagcctcaattgcagctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcatcaaggaacacaaccgg +tgaggtacttctgaatcttgaattaggccctgagctcaacccttatctgagacatttgtcccgcatgtacaa +cggttatgctggtggtatgcaggttcaggtgatcctagctgggaatgcgttcgcagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgtagaaaatattagtgcagcccaaatcacaatgttcccccatgt +agttattgatgtaagacagcttgagccagtgcttttacccctccctgacataaggaataggttctttcatta +caatcaggaaaacact---tctagaatgagacttgtggctatgttgtacacaccccttagggc---aaattc +tggtgaggatatgtttacggtgtcttgcagagtcctgacccgtccagcccctgactttgagttcacgtttct +ggtgccgccaactgtagaatcaaagactaagccctttacactcccaattctaactcttggagaactatctaa +ttctaga---ttccctgccccaatagacatgctgtacataaatcccagtgagacaattgtggtgaggtcaca +aaatggccggtgtcttctggacggaacacttcaagggaccacccagctggcgcccacccaaatttgctcctt +caggg-----------------------------------------gcacgctggttcgccag--------- +----------gagtcgaggtct------gcagat-------------------tcagtagattcagtag--- +--actcagctaga--------cgaacaatga----------------accatcct----------------- +----------ctctacgttcagctgaggaacctcgatgggacatcatatgatccaacagatgaggtgccagc +ggttctgggtgccatagattttaaaggaactgtgtatggggtcgctagtcaaa---gggacaccaaagg--- +-----ct---ctgtagga---------gcgacc--------cgc-----------gcccatgaagtgacaat +aaacaccagagatgctaaatactctccaaaacttggctctgtgttgat---gc---------attctgaatc +cactgattt---cttcagtgaccagcccatcc---------------------------gctttactccta- +--------ttggtatgggggaggaa------------------aatgattggagccaatgggatttgcctga +ttattctggtgcc-ctcacc------ctcaacatgcacctagcccccgcagttgcccctgctttccctggtg +agcgcattctcttctttagatcagtggtgccag------ctgctggtggtta------tggaa--------- +--aaggtgaaatagactgtctcatcccacaggaatggattcagcatttctaccaggaggccgccccaacaca +atccgcggtggcccttattagatatgttaatcctgacactgggagaagcctctttgaggcaaagctacatag +agaagggttcatcactgtggcaagttctggagacaaccccatagttgtgccatcaaatggctacttcagatt +tgaggcttgggttaatcaattctatacacttacccccatgggagctggacaggggcgcaaa---------ag +agccc---------agtaatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccaaaaggtagagtatgacttcaataaacaa--- +------------------------------ctccaattggcatcctttcaacatgacaaagagatgttgcag +tcacaagttctggccactaaacagctccaacaggagatgatgaacataaagcaaggggtcttgaccgctggc +ggcttttcccctacagatgctgcaagaggcgctgtgaacgcgccgatgacaaaaattctggattggaatgga +acgaggtattttgccccaaacagtatgaagacaaccagttattcagg-ccagctctccagtaaccctgtaca +ta-----------agcaatccacactaccc---cgtcccagccc---------------------------t +tcaa-------------------aaactaatgttagt----------------------------------- +----------------------------------------------------------------------ag +tggttctt-----------ctagtgtgtatagttctttatcttctgcttcctcac----------------- +---------------------aatcaactca---ttcaacggttttgactg-------cggg--------at +ccgggtc----g---tctag-------------------gacagctccctcct---------cctcaacagc +ttccac-------------------ctt--------------gtctagaactagtgattgggtaagaggaca +aaatgagagactcagcccgtttatga---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgtccccaa +agctgttttgga-ctcctggactcctatgt------------tcaataccaataggcagcctctcttcgctc +acattcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-agg---------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140681.1/1-7543 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E1300319_p6_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------------gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaagcagccc-cccccgagggaaatatcacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaataaggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaggctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgttgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccgagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcacactaaactgcgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggttgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactacgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gtccaccaacaaggacgggtgcccgaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agacaggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccggacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcgtctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggtgttcttt +ggagtccccgtcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaggccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccaccttgcacctatgaaccagcctaccttggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcaactgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagttcagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>MF140682.1/1-7538 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E1300320_p6_d18 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------------gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaagcagccc-cccccgagggaaatatcacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaataaggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaggctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgttgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccgagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcacactaaactgcgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggttgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactacgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gtccaccaacaaggacgggtgcccgaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agacaggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccggacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcgtctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccgtcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaggccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccaccttgcacctatgaaccagcctaccttggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcaactgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggaaatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +agatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagttcagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgttcggggctccccc------------------aa +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140683.1/1-7514 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P4-GII.4/Rotterdam/E1300321_p6_d204 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +------------------------------gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaagcagccc-cccccgagggaaatatcacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttttagtg----------ccaa---agatggtgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaataaggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcctcgctattcac +caggcccataaaagacataatagggaggctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgttgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatggtctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagagccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatttgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccgagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcacactaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggttgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactacgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gtccaccaacaaggacgggtgcccgaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agacaggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccggaggacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcgtctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccgtcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaggccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggggttgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcaactgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtacctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------atttcaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaactccagatttcgtgggaaagattcgaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcgaaa---------ctgatacaaa +agatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatggatgctcccaag +ttattcaggtaaa-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagttcagcagtaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagctaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +tacatctt-----------ctaat------------gcttctgctgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t-------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140684.1/1-7489 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P21-GII.3/Rotterdam/E1300322_p7_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +----------------------------c-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttataacg----------tcaa---agagggtgtttctggtttgcctgaactctcaactgtcacccaact +agaggagaactctacagcgttcagtgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaccgagggttagt +gctcggtgtacacaaaccaccagcagccatcagtcttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccatcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +taactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctctcacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcaggtctcctccacgagagattagacgaatatgaactgcagggcc +caacacccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcattaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgtccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +agaacggatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttaggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaatggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtgccaattgattctctgcacactagccctactgaaaatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcagcccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggacaatctaaatggaactccttatgatcctgcagaagacataccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgagtc +tgctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcaag-atcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctgattaggtacatcaaccctgatactggtagagtattatttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccacacccagcagtgggtcttcagcgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +gaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-t------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140685.1/1-7478 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P21-GII.3/Rotterdam/E1300323_p7_d287 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +----------------------------c-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttataacg----------tcaa---agaaggtgtttctggtttgcctgaactctcaactgtcacccaact +agaggagaactctacagcgttcagtgttccccctcttagtcagagggagaacagggatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgagggttagt +gctcggtgtacacaaaccaccggcagccgtcagtcttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccatcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +taactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctctcacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +cagccagttctctcgttgcccgagcatcaggtctcctccacgagagattagacgaatatgaactgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgttaaaactatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcattaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgtccatcaaacaaatacaaatccacaagtcaggtgagttctgccggctaaggttcccaaaaccaatc +agaacggatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccttgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaatggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtgccaattgattctctgcacactagccctactgggaatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatgcagtagcccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------ataaaattggataatctaaatggaactccctatgatcctgcagaagacacaccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgagtc +tgctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcaag-atcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctagttaggtacatcaaccctgatactggtagagtattatttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtgattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aacca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccacacccagcagtgggtcttcagtaaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgttactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------agtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140686.1/1-7479 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P21-GII.3/Rotterdam/E1300324_p7_d365 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttataacg----------tcaa---agaaggtgtttctggtttgcctgaactctcaactgtcacccaact +agaggagaactctacagcgttcagtgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaccgagggttagt +gctcggtgtacacaaaccaccagcagccgtcagtcttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccatcca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +taactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccaaccagacatgtggaaagacaccttcaaacctgacttctctcacataaaactga +cattggccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +cagccagttctctcgttgcccgagcatcaggtctcctccacgagagattggacgaatatgaactgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgttaaaactatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcattaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgtccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +agaacggatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccttgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaatggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacaacaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagccctactgacaatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttgcctagccaaatttgtgcttt +caggg-----------------------------------------gcgtactcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagtagcccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------ataaaattggacaatctaaatggaactccctatgatcctgcagaagacataccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgagtc +tgctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcaag-atcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctgattaggtacatcaaccctgatactggtagagtattatttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtaattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccacacccagcagtgggtcttcagcaaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +gaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------agtgtag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140687.1/1-7495 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P21-GII.3/Rotterdam/E1300325_p7_d434 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttataacg----------tcaa---agaaggtgtttctggtttgcctgaactctcaactgtcacccaact +agaggagaactctacagcgttcagtgttccccctcttagtcagagggagaacagggatgctaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgagggttagt +gctcggtgtacacaaaccaccggcagccgtcagtcttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaagaattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccagtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccattca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +taactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctctcacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +cagccagttctctcgttgcccgagcatcaggtctccttcacgagagattggacgaatatgaactgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgttaaaaccatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcatcaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaagaagacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +agaacggatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttgggcacgactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccatggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccttgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaatggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacagcaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagtaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagccctactgacaatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttgcctagccaaatttgtgcttt +caggg-----------------------------------------gcgtactcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagtagcccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------ataaaattggacaatctaaatggaactccctatgatcctgcagaagacataccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgagtc +tgctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcaag-atcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctgattaggtacatcaaccctgataatggtagagtattatttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtaattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaacat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccgcacccagcagtgggtcttcagcaaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +cactaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +gaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------agtttag--t-----------gggtggggga-------- +-------tct-ct----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140688.1/1-7530 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P21-GII.3/Rotterdam/E1300326_p7_d553 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacataccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttataacg----------tcaa---agaaggtgtttctggtttgcctgaactctcaactgtcacccaacc +agaggagagctctacagcgttcagtgttccccctcttagtcagagggagaacagggatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgagggttagt +gctcggtgtacacaaaccaccggcagccgtcagtcttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccatcca +cgacgcccttagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +caactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccagccagacatgtggaaagacacctttaaacctgacttctctcacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactccccatgggaagggtgtcatgaagaccctca +cagccagttctctcgttgcccgagcatcaggtctcctccacgagagattagacgaatatgaactgcagggcc +caacccccacaacattcaacttcgaccgcaacaaagtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgttaaaactatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcattaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcaaaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggctaaggttcccaaaaccaatc +agaacggatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaatccagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctatatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggagggaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagagggtggtgac +aacaagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccttgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggt +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaacggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagaaaaattgacaacaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgacccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagcaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaaccatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaactgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttcttccatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgttttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagataaaacccttttccctccctattctgaccatctctgaaatgtccaa +ctctagg---ttccctgtaccaattgattctctgcacactagccctactgaaaatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttacctagccaaatttgtgcttt +caggg-----------------------------------------gcgtactcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagtagcccctaggttgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggacaatctaaatggaactccctatgatcctgcagaagacataccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgagtc +tcctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcaag-atcacc------cacaacatgaacttggccccagctgttgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctgattaggtacatcaaccctgatactggtagagtattatttgaggccaaactgcacaa +attaggtttcataactatagctaagaatggcaattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaatagtaaacat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaaattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +ga-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccacacccagcagtgggtcttcagcaaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +cactaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggactgcttttgtcactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------agtttag--t-----------gaaaagatta-------- +-------ttt-tta--------------------aatttg--------at-ttaaaattagatttaa-ttt- +--------------gga---atct------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140689.1/1-7531 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P21-GII.3/Rotterdam/E1300327_p7_d637 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacataccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaaccatt +tcttataacg----------tcaa---agaaggtgtttctggtttgcctgaactctcaactgtcacccaact +agaggagaactctacagcgttcagtgttccccctcttagtcagagggagaacagggatgctaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatacgtggaacgagggttagt +gctcggtgtacacaaaccaccggcagccgtcagtcttgctaagattgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgattccaaagtgaaaaaggtggccaatgttgtcctttgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttgaaacccctaaacatccttaacatcctagccacatgtgattg +gacttttgcaggcatagtggaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggaaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccatatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaagcgaggaaactttccaccaagtctgcctcgccggatatcgt +gggcacgataaacgccctactgtcaagaattgctgctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccagtcgttgtgatgatttcagggagaccaggtattgggaaaacccacctagctag +agagttggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgttctctgggacgactacgggatgagcaaccccattca +cgacgccctcagactccaggagctcgctgacacctgtcctctcacactcaactgtgacaggattgagaataa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +taactttgaagcttg-ctcaagacgcatagatttcctcgtctatgctgatgcccctgaagttgagaaggcca +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctctcacataaaactga +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +cagccagttctctcgttgcccgagcatcaggtctccttcacgagagattggacgaatatgaactgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acggtcttgttgacacaatgagggtcggatcacagctcaagaatgttaaaaccatgacagaactcaagcagg +ctctcaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacacttgaatctgatg +gcaaaggcaatgtgcacgtcgagaaggtgaacaacactagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaagtgtgccagaattaggtactatgttaagtgtgtccaggaagctctctactccatcctgc +aaattgccggggctgcattcatcaccacgcgcatcacaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagcagaagatctggagga--------gaccaacaacgaggagggctgtccaaaacctaaa-- +-aat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagggaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaagaggacttctgtgaagaagaggaggctaaaatccggcaga +ggatattcagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggccgatgatgacaggaatgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaatccacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +agaacggatgtcacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggcacccacgcaaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgctactcacagggtccaacgctaagagcatggatttgggcacaactcct +ggcgattgtggttgtccctacatctacaagagagggaacgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggggaggccatgctagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccatggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccttgccacctggaacctatgagccagcctatctgggtggcaaggacccc +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcgcaggcgtgtgcatcactagacaagaccacctccagcggccaccctcac +cacatgcggaagaacgattgttggaatggggagactttcacaggaaaattggcagaccaagcatcaaaggct +aacctaatgtttgaggaagggaagaacatgaccccagtatacacaggagctctgaaagacgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaactatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccactgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacattccagatataaatatcattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaacgagggattaccctctggcgtcccttgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctatcccctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaattgacagcaaaattg +aaggaatacgggctgaaaccaacccgtcctgataaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaactggaccaaagctca +atactcaggcagatgtactggaccaggggaccaaaccatgaggacccctttgaaacgatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcattgcatggtccatcattctacagcaaaatc +agcaaactagtcatctcagaattgaaagagggtggaatggacttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctccctgttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtgtcccctagaaattcccctgg +tgaagttcttcttaatttggagttggggcctgaaataaatccttatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaattttccaattgacaatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggacgtcagacagttggaaccagtcaacctcccgatgcctgatgttcgcaacaacttctttcatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagagcaaataattc +tggggatgatgtcttcactgtgtcctgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacactagccctactgataatattgttgtccagtgcca +gaatgggcgcgtcacccttgacggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gcgtactcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcagcccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------ataaaattggataatctaaatggaactccctatgatcctgcagaagacatgccagg +ccccctgggaacaccagatttcctgggcaaagtctttggcgtggccagccaga---gaga------------ +-----tc------------ctgataccacgact--------agg-----------gcacatgaagcaaagat +agacacatcatctggccgtttcgccccaaaactaggctcactagagatatcc------------actgaatc +tgctgattt---caatccaaacaaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccag-----g----ctgagggagactttcaacaatggactctacccga +ctatgctggcgcg-atcacc------cacaacatgaacttggccccagctgtcgctcccaacttccctggtg +agcagctcctcttcttccgctcacatttgccat------cttctggtgggcga-----tccg---------- +--acgggattctagactgcctggtcccccaagagtgggtacagcacttctaccaagaatcagccccctctca +atctcaagtggctctgattaggtacatcaaccctgataatggtagagtattatttgaggccaagctgcacaa +attaggtttcataactatagctaagaatggtaattctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaacat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaaaagattacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccagacccgcacccagcagtgggtcttcagtaaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcca--------------------------------cagttgtcagctcaata--------------- +------------------------------------------------------------------------ +----------------------------------------------------t------------------c +cactaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagttc +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +gaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-tta--------------------aatttg--------at-ttaaaattacatttaa-ttt- +--------------ggc---atctt----------------------------------------------- +------------------------------------------------------------------------ +- +>MF140690.1/1-7497 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P4-GII.4/Rotterdam/E7800011_p8_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcgagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgaactttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccacttaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcctaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggagaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgatgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacctatctcctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtactcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttttaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtaaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtagtaccaccccccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcgca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgaggcagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140691.1/1-7505 |Norovirus GII strain Norovirus/GII/Hu/NL/2012/GII.P4-GII.4/Rotterdam/E1300329_p8_d173 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +----------------------------c-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcgagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgaactttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccacttaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcatggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacgtattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacttgctccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactga +cactggccccacagggtggtttcgataagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggttgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcctaaaacctagg-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggagaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacgcttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacctatctcctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtactcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccagatcactatgttcccccatat +gatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttttaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtaaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------ctccaaa------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctagggactccagacttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggggcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgataccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcgca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggc +ggattctctgaggtagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcatct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140692.1/1-7486 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300330_p8_d269 ORF1 gene, partial cds; ORF2 gene, complete cds; and ORF3 gene, partial cds +----------------------------c-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcgagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgaactttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccacttaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcaaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcatggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacgtattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctattgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccgccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacttgctccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactga +cactggccccacagggtggtttcgataagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggttgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactgccagcaaggacgggtgcctaaaacctagg-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatttttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggatt +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacgcttcctattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacctatctcctgatatcatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtactcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccagatcactatgttcccccatat +gatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttttaccatta +taatcaatcaaatgac---tccactatcaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtaaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ctccaaa------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctagggactccagacttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggggcgccgacttctctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccaa- +--------tcggtgtcatccaggaaggtgataccccccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcgca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggc +ggattctctgaggtagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcatct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------g-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140693.1/1-7543 |Norovirus GII strain Norovirus/GII/Hu/NL/2011/GII.P4-GII.4/Rotterdam/E7800020_p8_d340 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcgagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgaactttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccacttaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcaaggccttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcatggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacgtattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctattgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccgccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacttgctccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactga +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggttgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactgccagcaaggacgggtgcccaaaacctagg-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatttttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggaatgtggatt +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacgcttcctattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacctatctcctgacatcatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtactcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccagatcactatgttcccccatat +gatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttttaccatta +taatcaatcaaatgac---tccactatcaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtaaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------cttcagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctagggactccagacttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggggccgccgacttctctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgatactaaccaaaacacaa---------------------------agttcaccccaa- +--------tcggtgtcatccaggaaggtgataccccccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcgca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggc +ggattctctgaggtagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcatct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140694.1/1-7545 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300280_p9_d0 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaagtattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ttaa---ggatggtgtttccggcttgcctgacctttccaccgttaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcatggct +gaa---caggagaatgatccagagaacaactggtttctttaggccctatcaagactggaataggaaacccct +tcctactatagatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttctttccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +tctagatctcgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccggggatagggaagacccacctcgctag +ggaagtggctaagaagatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagagtcgtcctatgggacgattatggaatgagcaaccccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactagactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcatggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgagcgtcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgagaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgcctgaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtatatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaaacaccaccgtgcagatcaacaatgagctggctggtgctc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccagcaatgacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtcttttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaaatcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacagggtccaacgccaagagcatggacatgggtactacacca +ggtgattgcggctgtccctatatttacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtggagggaacactgtcatatgtgccactcaggggagtgaaggagaggctacacttgaaggtggtgac +aacaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcatctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaagtcatgagggagcagttgaaaccattcacagagccaaggggc +aaaccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggttatccgcac +catgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattctaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctctc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacacaatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccgacccgccctgacaaaactgaaggaccccttgtcatcactgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaagtcactatgtttccccatat +aatagtggatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttctaactgttgaagagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgacatcgtagttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaattgtcctctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaag----------- +-----------ttggaaa------------------------------------------------aa---- +-------ctaaca----------------------------------gatacaca----------------- +----------------atgaatttggcctccccaaattggaacagttacgatccaacagaagataccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaattccaggtggctcgacc--------cgc-----------gcccacaaggccacagt +gcgcactgggagcgccgacttttctccgaaactgggtaaaattcaatttgaca---------ctgacacaag +taatgatct---tgacaccaaccagaacacaa---------------------------agttcaccccag- +--------tcggcgttgtccaggaaggtgatgatacccaccagaaagaacccatacaatgggagctcccaag +ctattcaggcaga-ggcact------cataatgtacacctggcccccgctgtagcccctactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgtggcgggta------cccca--------- +--acatgaatttggactgtctactccctcaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtagctctgttaagatttgtgaatccagacacaggtagggttttatttgaatgtaagcttcataa +atcaggctatgttacagtggcttacactggcaaacatgatttggttatcccccctaatggttattttagatt +tgattcctgggtcaaccagttctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataatagaaaatta +caacaagattccttccaatttagtagcaatctccaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gggctaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggctcctct------------------ag +catgtctt-----------ctaaa------------tcttctattgcttctt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>MF140695.1/1-7540 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300281_p9_d58 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaagtattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ttaa---ggatggtgtttccggcttgcctgacctttccaccgttaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcatggct +gaa---caggagaatgatccagagaacaactggtttctttaggccctatcaagactggaataggaaacccct +tcctactatagatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttctttccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +tctagatctcgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccggggatagggaagacccacctcgctag +ggaagtggctaagaagatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagagtcgtcctatgggacgattatggaatgagcaaccccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactagactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcatggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgagcgtcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgagaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgcctgaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtatatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaaacaccaccgtgcagatcaacaatgagctggctggtgctc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccagcaatgacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtcttttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaaatcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacagggtccaacgccaagagcatggacatgggtactacacca +ggtgattgcggctgtccctatatttacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtggagggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcatctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaagtcatgagggagcagttgaaaccattcacagagccaaggggc +aaaccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggttatccgcac +catgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattctaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacacaatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccgacccgccctgacaaaactgaaggaccccttgtcatcactgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttctaactgttgaagagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgacatcgtagttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaattgtcctctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaag----------- +-----------ttggaaa------------------------------------------------aa---- +-------ctaaca----------------------------------gatacaca----------------- +----------------atgaatttggcctccccaaattggaacagttacgatccaacagaagataccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaattccaggtggctcgacc--------cgc-----------gcccacaaggccacagt +gcgcactgggagcgccgatttttctccaaaactgggtaaaattcaatttgaca---------ctgacacaag +taatgatct---tgacaccaaccagaacacaa---------------------------agttcaccccag- +--------tcggcgttgtccaggaaggtgatgattcccaccagaaagaacccatacaatgggagctcccaag +ctattcaggcaga-ggcact------cataatgtacacctggcccccgctgtagcccctactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcggcgggta------cccca--------- +--acatgaatttggactgtctactccctcaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtagctctgttaagatttgtgaatccagacacaggtagggttttatttgaatgtaagcttcataa +atcaggctatgttacagtggcttacactggcaaacatgatttggttatcccccctaatggttattttagatt +tgattcctgggtcaaccagttctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataatagaaaatta +caacaagattccttccaatttagtagcaatctccaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggtactgggctcccgatgccaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gggctaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggctcctct------------------ag +catgtctt-----------ctaaa------------tcttctattgcttctt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtct------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140696.1/1-7499 |Norovirus GII strain Norovirus/GII/Hu/NL/2013/GII.P4-GII.4/Rotterdam/E1300282_p9_d121 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacccactccagaactggtc-------aaaagtattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ttaa---ggatggtgtttccggcttgcctgacctttccaccgttaggcaacc +ggaagaatctaacacagccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactgggacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcatggct +gaa---caggagaatgatccagagaacaactggtttctttaggccctatcaagactggaataggaaacccct +tcctactatagatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggtgactatgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttctttccgaagaaggaggaggcaaatgagctggctatggtgagatctatcgaggatgcagt +tctagatctcgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccggggatagggaagacccacctcgctag +ggaagtggctaagaagatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggagagagagtcgtcctatgggacgattatggaatgagcaaccccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggccaacccagcaccactagactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcatggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgagcgtcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgagaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgcctgaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtatatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaaacaccaccgtgcagatcaacaatgagctggctggtgctc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccaacaatgacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatctcatctgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtcttttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaaatcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcacctgagggtactgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacagggtccaacgccaagagcatggacatgggtactacacca +ggtgattgcggctgtccctatatttacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtggagggaacactgtcatatgtgccactcaggggagtgaaggagaggctacacttgaaggtggtgac +aacaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcatctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaagtcatgagggagcagttgaaaccattcacagagccaaggggc +aaaccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggttatccgcac +catgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattctaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctctc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacacaatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccgacccgccctgacaaaactgaaggaccccttgtcatcactgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaagtcactatgtttccccatat +aatagtggatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttctaactgttgaagagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgacatcgtagttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaattgtcctctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaag----------- +-----------ttggaaa------------------------------------------------at---- +-------ctaaca----------------------------------gatacaca----------------- +----------------atgaatttggcctccccaaattggaacagttacgatccaacagaagataccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaatcccaggtggctcgacc--------cgc-----------gcccacaaggccacagt +gcgcactgggatcgccgacttttctccgaaactgggtaaaattcaatttgaca---------ctgacacaag +tcatgatct---tgacaccaaccagaacacaa---------------------------agttcaccccag- +--------tcggcgttgtccaggaaggtgatgattcccaccagaaagaacccacacaatgggagctcccaag +ctattcaggcaga-ggcact------cataatgtacacctggcccccgctgtagcccctactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgtggcgggta------cccca--------- +--acatgaatttggactgtctactccctcaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtagctctgttgagatttgtgaatccagatacaggtagggttttatttgaatgtaagcttcataa +atcaggctatgttacagtggcttacactggcaaacatgatttggttatcccccctaatggttattttagatt +tgattcctgggtcaaccagttctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataatagaaaatta +caacaagattccttccaatttagtagcaatctccaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggtactgggctcccgatgccaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gggctaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggctcctct------------------ag +tatgtctt-----------ctaaa------------tcttctattgcttctt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatg------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF140697.1/1-7545 |Norovirus GII strain Norovirus/GII/Hu/NL/2014/GII.P4-GII.4/Rotterdam/E1300283_p9_d176 ORF1 gene, partial cds; and ORF2 and ORF3 genes, complete cds +---------------------cgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------cc----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaagtattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttacagtg----------ttaa---ggatggtgtttccggcttgcctgacctttccaccgttaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagagcagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctctttgtactg +gagacctgtgtatactcctc---agtacctcatctctccggatactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcatggct +gaa---caggagaatgatccagagaacaactggtttctttaggccctatcaagactggaataggaaacccct +tcctactatagatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttactcggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatacgggctagagatcctgaagttggt +catgaagtggttctttccgaagaaggaggaggcaaatgaactggctatggtgaggtctatcgaggatgcagt +tctagatctcgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccggggatagggaagacctacctcgctag +ggaagtggctaaaaagatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggagagagagtcgtcctatgggacgattatggaatgagcaaccccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactagactatgt +caactttgaggcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagctctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgagcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgagaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgcctgaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtatatagtggttgtacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaaacaccaccgtgcagatcaacaatgagctggcaggtgctc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccagcaatgacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctagtcacaggttctgaaa +tcaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtcttttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaaatcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcgaccatgaggatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacatgggtactacacca +ggtgattgcggctgtccctatatttacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtggagggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcatctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaagtcatgagggagcagttgaaaccattcacagagccaaggggc +aaaccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggttatccgcac +catgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacagctgcactcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggacctggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaggcattctaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatcactgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---tccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtctttacagtttcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttctaactgttgaagagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacaggccccagtagtgacatcgtagttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaattgtcctctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaag----------- +-----------ttggaaa------------------------------------------------at---- +-------ctgaca----------------------------------gatacaca----------------- +----------------atgaatttggcctccctaaattggaacagttacgacccaacagaagataccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaactccaggtggctcgacc--------cgt-----------gcccacaaggccacagt +gcgcactgggatcgccgatttttctccaaaactgggtaaagttcaatttgaca---------ctgacacaca +taatgatct---tgacaccaaccagcacacaa---------------------------agttcaccccag- +--------tcggcgttgtccaggaaggtgatgactcccaccagaaagaacccatacaatggcagctcccaag +ctactcaggcaga-ggcatt------cataatgtgcacctggcccccgctgtagcccctacttttccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcggcgggta------cccca--------- +--acatgaatttggactgtctactccctcaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtagctctgttaagatttgtgaatccagacacaggtagggttttatttgagtgcaagcttcataa +atcaggctatgttacagtggcttacactggcaaacatgatttggttatcccccctaatggttattttagatt +tgattcctgggtcaaccagttctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------aataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataacagaaaatta +caacaagattccttccaatttagtagcaatcttcaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggaatgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gggctaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggctcctct------------------ag +catgtctt-----------ctaaa------------tcttctattgcttctt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaggcgaggggagtcacg--------ggtgtaaagt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY496328.1/1-7263 |Norovirus GII strain Hu/GII.P23_GII.23/2010/PE/PE1848, complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------cc--------------------ccccacccccaaatgg------tgaggacatagtcatcaag +tataccaaac----------aagg---ggatacactcagtggagtgcccaccgtctccactgcagacatatc +cccattgcatgacaccgcatatagtgtccctcccttggaccagagggaaaaggtggacgcaaaagaacccct +aactgggtcaatacttgagatgtgggatggtgagatctaccattacgggctctatgtggagagagggcaagt +tctcggtgtgcacaaaccaccagctgctgtgagcattgcacgcatcgaactaacccccctctctctatactg +gagaacagtttacacacctc---cctacctggtagctcctgacacccttaagaagctccacggtgagacatt +cccctacacagcatttgataacaactgctactcattttgttgttgggttctggacctgaacgactcgtggct +caa---tagaaaattcgtgtcaaggaccacaggcttctacagaccctaccaggagtggaacaggaaaccatt +gccaaccatggacgaaggaaagcttaagaaggtggccaacgtcttcctgtgtggcctgtctgggcttttcac +caggcccatcaaagatctcataggcaaactgaaaccactgaacattcttaacattgtcaccaattgtgattg +gacgttcccgggagtcgtagaggcgatcatcctcctcgcagagctcttt---gggatcttctggacaccacc +agacatatctgccttcgtcgcctctctgttaggtgactatgagatgcaaggccccgaggacattgcgaccga +gatagtcccagtcattctaggtggtattggcatggtacttggtttcactaaagagaagatcggccggttgct +gggttccgcggcatcatcactcagggcctgcagggaaatcggcaactatgggatagaggtggtaaaattggt +gatgaaatggttctttccaaccaaaagtgaggtcaatgagatggaaatggtcagaacaatagaggacgcagt +gctcgactttgaggcaattgaaaacaatcacatgacagctctactcaaagacaaaaatagcctggccacctt +cctcagggcattggatatggaagaagagaaagcgcggaaactatcaaccaaatccgcgtcccccgacatagt +cggcactataaatgcactcctggcgagaattgccgctgctaggtcactagtgcacagggctaaggaagagat +gtcatcaaggatgcgtcctgttgtcatcatgatatccgggcgacctgggatagggaaaacccatctggcccg +cgacctagctaagaagatggcagccactctgtcaggtgatcagagagtgggcctggtcccaaggaatggtgt +tgaccattgggatgcatacaagggagaaaggatcgtcctgtgggatgattacggtatgagcaaccccgtggc +agacgccctccgactccaggaactcgccgatacatgccccctgacactcaactgtgataggatagagaacaa +aggaaaggtctttgacagtgacaccttgatcatcactactaatctggccaacccggcccccctggactatgt +gaactttgaagcttg-ctcacgccgcatagatttcctcgtttatgcggactctccttcagttgataaggcaa +agagagacttcccaggccaaccagacatgtggaaagacgccttcaaaccagacttctcacacataaagctac +aactggcaccacagggaggatttgacaagaatgggaacaccccacatgggaagggcgtcatgaaaacactaa +ccacacactccctcatagcccgtgccactggtttactccatgagagattagatgaatttgacttacagggtc +aagaattgccagtctacaacttcgaccagaacaaggtggccgctttccggaaactagcggccgacaacaagt +atggtctcatggacactttgagggcaggcaacaaattgaaggaggttaagaatctagaccaattcaaggaag +cggtgaaggacatccgcataaagccttgcaggataatctacaactcaatggcttatgatctggattcaaatg +ggtcaggcagagtcaatgttaagaaagtgggagaccaaagagtccaggccaacaatgaactcaactccgcac +tcaacaaactgcgcggggctagaatcagatactatgtgaagtgcttccaggaaatggtctactcccttctcc +agattgctggtgcggccttcgttacatcaagaatggcacaaagaatga------atgtcaacaagctgtgga +caaaaccaga------------aaaaca--------acaggaggcctctgcagggccccccaccccccca-- +--------actgaag---agtggaccataacaccaatggacacgatccaggaaggtaagaagggcaagaaca +aaagtggtaggggtaagaaacacactgcattctctagtaagggccttagtgatgaggagtatgatgagtaca +agagaatcagggaggagcgccaagggaagtactccatagaagaatacctccaggacagggaccggtac---t +atgaagaattggccatagccaaagcaacagaggaggacttctgtgaagaggaggagatcaagataaggcaaa +gaattttccgcccaaccaggaaacagcgtagggaggagagagccactctaggccttgtcacaggcagtgaaa +ttagaaagaggaaccccgatgatttcaaaccaaaaggtaaactgtgggctgatgatgaccgtagtgtcaact +acaatgaaaggatagactttgaagcccctcccagcctctggtccagaatagtcaacttcggttcgggttggg +gcttctgggtctcat-caaatttgttcatcacctccacacacgtcatcccacaaaacatgtctgaggctttc +ggggtaccaacaagccaaatccaaatacataggagtggggagttctgcaaaatgaggttcccaaaggccatc +aggcccgatgtctctggcatgattcttgaggaaggcgcgcctgaaggcacggtggtgaccatattgatcaaa +agaccaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaaatacaggggagg +atgattggaggtcaaatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtgcct +ggtgattgtggctgcccttatgtctacaaaagaggcaatgattgggtagttatcggggtgcacaccgccgcc +gccaggggtggcaacacggtgatctgtgccactcaggggccagatggtgaagccacacttgagggtggcgac +aaccatgggacctattgtggcgcgccaatattaggaccaggaaacgccccgaaactcagcaccaagaccaaa +ttctggagatcctccaacactccgctcccccctggcacatacgaaccagcctacctcggtggtaaggaccca +agggtcaagggcggcccatcactacaacaagtcatgagggagcaactcaagcccttcactgccccacgtgga +aaaccaccaaggccagcggttttggaggccgctaaggaaaccatctgcaatgtgctggagcaaaccattgaa +ccgccccagaagtggtcctatgcacaggcttgtgcctccctagacaaaacaacctcaagtggccacccccac +cacaagaagaaaaatgacaattggaacggggaatccttcactggtgttctggctgatcaggcttcaaaagca +aacctcatgtatgagcaagggaaacacatgcagcctgtgtacacaggcgcgctcaaagatgagcttgtcaaa +accagcaagatctatgaaaccattaagaagagactcttgtggggttcagacctcggcacaatgatacgctgt +gccaggtcatttggtggtctcatggatgaaatgaaggcaaactgtgtgaacctaccagtcagagttggcatg +aatatgaatgaagatggtcccataatctttgaaaagcattcaaagtacagatatcactatgatgctgactat +t-ccaggtgggactcaacacaacagagatgtgtcctgggtactgcacttgatataatgg-ttagatactcag +ccgaaccagaatt-agcacaaatcgtggctgaggacttgctgtcgcctagcgtcatggacgttggcgacttc +aaaatcaccataaatgagggcttaccatcaggagttccgtgcacatcccagtggaactcaatagctcattgg +ctgttaacactctgtgccatgtcagaagtctcaggactgtcaccagatgtggtacagtcaaattcatgcttc +tccttctatggggatgatgaaatagtcagcactgacatcaaattggacccccaaaaactgactgacaagttg +agagagtatggcttaattccaactaggcccgacaaaacagaaggaccacttataatcagagagagtctagaa +ggcctaacattcttaaggagggatgtgtgcagagacccagcagggtggtatggcaaacttgaccaatcatca +atcatgagacagttatactggacaaaaggacccaatcatgaggaccccaatgaaacaatgatcccacattcc +cagaggccagtgcaattgatgtccctacttggtgaggcggccctacacggaccgacattctataagagagtt +agcaagttggtcatcactgaattaaaggaaggtggaatggatttctatgtgcccagacaagaacctatgttt +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtggcaggaggagcaattgcagccccactaactggacaaacaaatttcattga +tccctggattagaggtaattatgtgcaagcaccaaatggtgaatttacagtgtcccccagaaattcgcccgg +tgaaattttgcttaatttagaattaggccctgaactcaacccattcttgtcccatctatctagaatgtacaa +tgggtatgctggcggtatcgatgtccaagtcatcatggcaggcaatgccttcaccgc---tggtaagatcat +ctttgcagcaatacctccccacttccccgtggaaaatcttagtccccctcagatcactatgttccctcatat +tatagtggatgtcaggacccttgaacccataaatatccctgtaccagatgttaggaacaacttcttccatta +taaccaaaacaatgag---tctcgcatgagactggtggccatgttgtacacccctcttaggtctaatgggtc +tgctgaagatgttttcacagtgtcatgtagggtcttaacaaaaccatctgcagactttgaatttaattatct +agtccccccaactgtagagtcaaggactaaacccttcacaataccaatactcacaattggggaaatgacaaa +ttcaaga---ttcccagtgcctattgacatgcttcataccagtccaacagaaaacattgttgttcaaccaca +aaatggtaggtgtaccatagatggtgagttgcttggcaccactcaactgatcacttccaatatctgttcatt +cagag-----------------------------------------gatccatctcag-------------- +------------ggcatgaagg--------------------------------------------ca---- +----atgatgacc----------------------------------aacacctg----------------- +----------tggcacttcaacatcacaaaccccaatggcactccatttgaccccactgaagatgtgcctgc +ccccctcggaaccccagatttcaggggtcaattgtacggtgtcatctcccagc---gagatagagagggaac +accctcg-----gaaaataatcagaaggcaaac--------agg-----------tcccaccagggagtgat +ttcaacaatctcaccaaaatttgtccccaagttaggttcagtcatgattggca---------catggactac +tgatgatat---caa---gaaccagccatcca---------------------------agttcaccccaa- +--------ttggc------ctcaatgatgatg------------ataattttaaacaatgggaactgccaaa +ttattctggggcg-ctcacc------ctcaacatggggttggcacctagtgttttccccacctatcctggtg +aacaaatccttttcttccgctcctatctgccat------tgaagggagggta------cggta--------- +--gtccatttattgactgcctagtacctcaagaatgggtcgctcacttctaccaggagtcagcacccgcaca +aacagatgtggccctaatcaggtatgtaaaccccgaaacaggacgtgtccttttcgaggccaaattgcacag +acaggggttcatcaccgttgccaagagcggcgacagccccatcaatgtgcctgccaatggttattttaggtt +tgattcttgggtcaatcagttttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctctagttaatgcagg---agctaatgctattaatcagaaaattgattttgagaataataaatat--- +------------------------------ttccaaaatgcatcatttgcccatgataaggatatgctgaat +gcacaggttgaggcaaccaagaaacttcaggctgacatgattgccatcaagcaaggggtattagtcgcgggc +ggcttttcccctactgatgcagcccggggagcaatcaacgcccccataacaaaagctctagattggaatgga +acaaggtactgggcgccaaatgccacctccaccacttcgatgtcaggtggcttcacagga------------ +ca-----------ggtttcgcacaggaccacaccaaat---------------------------------t +ttaaaac----------------caaccaggcccccaagccccca--------------------------- +-------------------------------------------------cct---------------agtag +tgggtctt-----------cagta------------aggtccaactcaacccaactcactagt--------- +----------ctgagc-------tcccactc------ctctgggtcatctcgatccagcggatcaacagtgg +ttagctctt------tgc--------------------------------ctt------------------c +ttctag---------------------------------------caggactagggattgggtcaatcaaca +aaatctcaatttggaaccacatttgc---ctgggtctctcagaacagcttttgtcactccaccatctagttc +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctttttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF918359.2/1-7565 |Norovirus GII.17 strain GII.17/GX213/CHN/2015, complete genome +-----tctttgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcggatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcggctgcgaccacacttagggcctgcagggatctaggatcttatggattggagatactcaaactggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctagccacata +cattaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcaagccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaaaggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggtgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggagtacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagattaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaagggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccagaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctgttctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagagacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggtgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaactttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtataa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cgggaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaaccaagcctttttccttgcctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtctccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaactcagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctctccttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +ccaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacaagtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>MF668937.1/1-7447 |Norovirus GII isolate Hu/IDN/ITD11-3/2015/GII.Pg/GII.1 nonstructural polyprotein gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +--------------------------aac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacatcgcaaagtcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacggccgcccaccccggagttaatt-------aaaaagattcc +acc-----------------------------ccccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---aggtggtgtctccggtctgcctgaactatccaccgtcaggcagcc +gggtgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggacgctaaagaaccgct +gcctggcaccatcctggagatgtgggacggagagatttaccactacggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctattagtcttgcaaaggttgaactagcaacactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccgggaactctaagaaaactacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttctgttgttgggtcttggatctaaatgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacccct +ccccactatggacgattccaaattgaagaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttgaacatactcaacatactagcttcctgcgactg +gactttcgcaggaatagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttgctaggcgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatggattggaaattctgaagttgat +cgtgaagtggttcttcccgaagaaagacgagacaaatgagcttgcaattgtgagatccattgaggacgcagt +gctagacctcgaagcaatcgaaaataatcacatgaccaccctgctcaaagacaaagacagcttagcaaccta +catgaagaccctggatcttgaggaggagaaagctaggaaactctccaccaaatccgcttctcctgacattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccttggtgcatcgggcaaaagaagagct +ttccagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaagacccaccttgccag +agatttggcaaagaaagttgcggccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaactgtgatagaattgagaataa +agggaaggtctttgacagcgatgccataattatcacaactaacctggctaacccggcaccattggactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctagtgtatgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccaggacaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttga +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttacaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatagacaccatgagagtgggaagccagctcaaaaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaatatttcaattagaaggtgccagatagtctatggtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtgagggttgataaggtgcaaaattcagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgagatgcgctaggattaggtattatgttaagtgtgtccaagaagccttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacacgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtccgaagacatcaagtctgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttctcgagtaagggtcttagtgacgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgctatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcggcaga +ggattttcagaccaacaaggaaacaacgcaaggaagagagggtttcactcggactggttacaggctcagaaa +tcaggaaaagaaacccggatgacttcaaacccaaaggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgaaaagctcagctttgaagcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttttgggtctcac-caagtctctttataacatccacccatgtcatacctcaaggggcacaagagtttttc +ggtgtttccatcaaacagatccaaattcataaatcaggtgagttctgccgactaagattcccgaagccaatt +aggactgatgtgacaggtatgatcctggaggagggggcccctgaaggcactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaagatccaaggtcgt +actgtcggaggacagatggggatgctcctgacagggtccaacgccaagagcatggacttgggtactacacca +ggtgactgtggatgcccatatatctacaaaagaggaaacgactacgtggtcatcggagtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaactcaaggaagtgagggcgaggccgtacttgaaggtggtgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaacgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacaacaccactcccacctggtacatatgaaccagcttacctcgggggcaaagacccc +agggtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaacccttcacagaacccagaggt +aagccaccaaagcccagtgtgttggaagcagccaaaaagacgatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggttacccgcac +cacgtgcggaagaatgaacactggaatggggagtctttcacagggaaattggctgatcaggcttcaaaagcc +aacttgatgtttgaggaaggaaaacacatgacaccagtctacacaggagctctcaaagatgagttagtcaaa +actgacaaaatatatggtaagatcaagaaaaggttattatggggttcagatctggcaactatgatccgttgc +gcgcgagcgttcggagggttgatggatgaattcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgaaaaacactctaggtacacctaccattatgatgcagattac +t-ctcggtgggactcaacacaacagagagctgtcttagctgcagccctggaaatcatgg-taaaattttccc +cagaaccacacct-agctcagattgtcgcagaagatctcctatctcccagcgtgatggacgtgggcgatttt +aagatatcaatcactgaaggactcccctctggggtgccttgcacttcacaatggaattccattgctcattgg +ctcctcacgctctgtgcactctctgaggtaacagatttatctcctgacaccatccaagcaaactcactcttc +tctttttatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggttaacagtcaaacta +aaagagtatggtctcaagccaacccgccctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttgcggagaactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggtcccaatcatgaggatccctctgaaacaatgataccacactcc +caacgacccatacagttgatgtccctactaggtgaagctgcgctgcatggcccatcgttctacagcaaaatc +agcaaattggtcatatcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagaaccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgtcgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcagcaacga +gacgatggcacttgagccggtggctggggcctccatagctgcccctttaaccggccaaaataatgtgataga +cccctggattagaatgaattttgtccaagctccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttaaatttggaattaggccctgaattaaatccattcttggcacaccttgcaagaatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaatgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattactatgtttcctcatgt +aattattgatgttagaactttagaacctgttcttttgcctttaccagatgttagaaataacttctttcatta +taatcagcaacctgag---ccccgtatgagacttgtggctatgttgtacacccctcttagatctaatggttc +tggtgatgatgtgttcacagtctcttgtagggtcctcactcgcccctctccagattttgattttaattattt +ggtccccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccatcggagaattgtcaaa +ttctagg---ttcccagtaccaatagatgaattgtacaccagccccaatgaaggagtggttgtgcaacctca +aaatggcaggtcaacacttgatggtgaactgcttggcaccacacaacttgtaccatcaaacatctgtgcctt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccaagtgccagac--- +---gatcaccatc----------------------------------aatggaac----------------- +----------------ctgcaggttacaaatgcaaatgggacttcatttgaccccactgaagatgtccctgc +accattgggcacgccggatttcctggcaaacatctacggagtcactagtcaga---ggaa------------ +-----cc------------ctgacaacacttgc--------cgt-----------gctcatgatggggtttt +ggcaacctggagccctaaatttacacccaagttaggatctgtggttttgggta---------cttgggaaga +aagtgatct---tgatcttaatcagcccacca---------------------------gatttacacctg- +--------ttggttt------------------gtatgacacaaaccactttgatcagtggattctacccaa +ttactctggaaga-ttgacc------ttaaacatgaatttggcaccctctgttgcccccctattcccaggtg +aacaaatacttttctttaggtcccacatacca-------cttaaaggaggcac-----ttcca--------- +--atggtgccattgactgtctgctccctcaggagtggattcagcatttctatcaggaatcagccccgtcacc +cacagatgttgctctgattaggtacaccaaccctgacacgggccgtgtcctatttgaggccaaactacatag +acaggggttcatcacagtagcaaattctggttctagacctattgttgttcctcctaatggttattttaggtt +tgattcttgggttaatcagttttactctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcagggcttgccggtgatatagtcaccaatggcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtagattttgaaaacaacaaacaa--- +------------------------------ctacagcaggcttctttcaaccatgacaaggaaatgttgcaa +gctcaaattcaggccacaaaacaattacaggctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgatgcagcaagaggggcagttaatgcgcccatgacgcaagtcttggactggaatggg +actaggtactgggcccccggagccacgaaaacaactgctttctccggcgggttcacaagctct--------- +cc-------------caataccaggactattgatttgc---------------------------------c +taggaaa----------------acatcaaccacaccagccccc---------------------------- +------acgcctgtgtc--tagacctagttctt--ctgcttctactgtttctacccgctcaacaattgttag +cgggactt--------------------------------ctggcctttcttcttcga-------------- +----------ctagga-----gctcttttag------------ttc---------------------ccaac +ccacttc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggcgctggagccctacatga---ggggagcgttacaaactgcttacgtgacgcctccctctagtag +agcttcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaatacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------gg------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>MF405169.1/1-7536 |Norovirus GII.2 strain Hu/US/1971/GII.Pf__GII.2/HenrytonSP17, complete genome +----gtgaatgaagat---ggcgtctacc-gacgcttctgctgccgctgctgct------------aacagc +a------ac----aacgacaacgtaaaatcttcaaatgacg---------------gagtgtttaacaacat +ggccgtcactcttaaacgag----ccctcggggctcggcctaaacaacca-accccgagggaaaaaccccca +aaa---------------------ccccccagaccaccaacaccagaattgata-------aagagaatccc +ctc-----------------------------ccccccacccaatgg------cgaggatgagccaattgtg +tcatttagtg----------ccac---gggtggcgtgtctgggttgcccgagctcacaactgtcgggcagcc +gcctgaggccaacacggccttcagtgtgcccccgcttagcctaagggagaatagggatgccaaagaacccct +aaccgggaccattttggaaatgtgggatggggagatttatcattatggtctgtatgtggagcgaggccttgt +gttgggtgtacataaaccaccagcagccatcagtgtagccaaagtggagctgactcccctttcactgtactg +gaggcctgtatacacgcccc---attatctcatctccccagacaacctgaagaaacttcatggggagttatt +tccctacacggcgttcgagaacaactgctacgccttctgctgctgggttttggacttgaacgattcgtggtt +gag---caggaggatgattagcaggaccacaggcttcttcagaccttaccaagaatggaacaggaagcccct +cccaaccatggacgattcaaaactgaaaaaggttgcaaacatcgtcctgtgtgccttgtcatcgctatttac +taggcccatcaaagatataatcggaaagcttagacccctgaatatcctaaatatcttagcttcatgtgattg +gacttttgctggcatagtggaatctctaattcttttagcagaactcttt---ggtgtattctggacgccccc +agacgtgtctgcgatgatcgcacccctactcggcgattacgagttgcagggcccagaggaccttgctgtgga +gctcgtgccggtcgtaatgggcgggataggcttggtgctggggttcaccaaggagaaaataggcaaaatgct +ctcctctgctgcttcaaccttaagagcctgcaaagatcttggagcctatggactagagatactgaaactggt +catgaaatggttctttccaaagaaagacgaggccaatgagttagctatggtaagagccattgaagacgcagt +actggacctagaagccattgagaataaccatatgaccactctgctcaaagataagaacagtcttgcagccta +catgaagaccttagatatggaagaagagaaggcaaggaaactgtccacaaagtcagcttcccctgacatcgt +gggcacaatcaatgctttgcttgcacgaatcgctgccgcacgctcattagtccatagagctaaggaagagct +ctccagcagaccgagaccagtcgtggttatgatttctggcaaacctggaataggaaaaacacacttggctag +ggatttggcaaagaagatagcctcgaccctcacaggagatcaaagagtggggcttatcccgcgcaatggggt +cgatcattgggacgcttataaaggtgaaagggtcgtgctatgggacgactatggtatgagcaaccccatcca +tgatgctctcagactacaagagctggcagacacatgccccttaactttgaactgtgacagaattgagaacaa +gggaaaagtctttgacagtgatgcaatcatcatcaccaccaatttggtcaacccggcaccactagactatgt +taactttgaggcctg-ctccaggcgcattgacttcctcgtgtatgctgatgctcctgaggttgagaaggcga +aacgggacttccccggccaaccagacatgtggaaagatgcctatcgcaatgacttctcacatatcaaactgc +aactggcaccacagggtggatttgacaagaacggtaacaccccccacggcaaaggtgtgatgaaaaccctga +ccactggatcgcttgttgcgcgcgcctcaggccttttgcacgagagaatggatgagtacgaactgcaaggac +catccctctcaaccttcaacttcgaccgcaacaaaatcgcggcattcaggcagctcgccgctgaaaacaagt +atggtttgatggacacaatgagggtgggcaaccagttgaggaatgttacaactatggctgagctgaagcagg +ccttgaggaacatcacgatcaaaaagtgtcagttagtctatggtgggagcacttacactctcgagtctgatg +gcaaaggtaaagttatggttgaaaaagtgcaaaacactagcatacaaatcaacaatgaaattgctggggcag +ttcaccatctcagatgtgccagaataagatactatgtgaagtgtgtccaggaggccatttactcagtactcc +aaattgccggcacagtgtttgttacatcacgcattgtgagccgcatga------acatccaaaacctatggt +ctaggccacagatagaggacacagatgt--------gaccaccgcagatgaagggtgtcctaaacctagg-- +-gat----gaggaag---agtttgttatctcttcagatgatatcaagtcagaagggaaaaagggcaaaaaca +agagtggccggggcaagaaacacacagcattctcaagcaaaggcctcagtgacgaggagtatgaggagtata +agaggatcagagaggagaggaatggcaagtactccatagaagagtatcttcaagacagagataaatac---t +atgaggaggtggccattgcaagagcaactgaagaagacttttgtgaagaagaggagatcaaaatccgccaaa +ggatcttcaggcctactcggaaacaacgtaaagaagagagagccaacctcggcctcgtcactggatctgaga +tcaggaaaagaaacccagatgacttcaaaccaaaagggaaactgtgggctgatgacgaccgaagtgtcgact +acaatgaaaggattagttttgaggccccacctagcatctggtccaggatcgtgaactttggttctggatggg +gattctgggtctcac-ccagtctcttcataacatcaacacatgttatacctcaaggcataaccgaagctttt +ggagtgcccataagacagatccaaatacataaatcaggtgagttctgtcgcctgagattcccaaaacccatc +agaacagatgtttcaggaatgattctggaggagggagcaccggagggcaccgttgctaccatcttgattaaa +agaaccactggagagttgatgcccctcgcagcacggatgggcacacatgcgactatgaaaatccaaggtcgc +acggtgggtggacagatggggatgctgcttactgggtccaacgccaagagcatggatcttggcaccacacct +ggtgactgtgggtgcccctacatctacaagaggggaaacgactatgtggttattggtgtccatacagctgct +gcccgtggggggaacactgtcatctgtgccacacaagggagtgaaggtgaggcaacacttgaaggtggcgac +aacaagggaacatattgtggagcgccaattctcggccctggaagcgctccaaagctaagcaccaaaaccaag +ttctggaggtcttccacgacaccgctcccacctgggacgtatgagccagcatacttgggaggaaaggacccc +cgagttaaaggtgggccatctctacaacaagtcatgagggatcaactgaaaccattcactgagcctcgtggc +aagcctccaagacccagtgtccttgatgcagccaagaaaactatcatcaatgtgctagagcaaacaatagat +cccccgcaaaagtggacgtacgctcaagcgtgtgcgtcacttgacaaaaccacctccagcgggttcccccac +catgtacgtaaaaacgaacattggaacggggagactttcaccggaaaattggctgaccaggcctcaaaagca +aaccttatgtttgaggaggggaaacacatgactccagtttacacagctgcccttaaagatgaattagtgaag +accgacaaagtgtatgggaagatcaaaaagagactactttggggttcggatctggccacaatggtgcggtgt +gcgcggtcctttgggggcctgatggatgagttaaaatcacactgcgtaaccctccccatcagggttggcatg +aacatgaatgaggacgggcccatagtctttgagaaacactccaggtacaggtatcattatgatgcagactac +t-ccaggtgggattcaacacaacagagggctgtactggctgcagccatggaaattatgg-taaagttttcag +cagaaccacagtt-agcccaggtagttgcagaagatttgctgtctcctagtgtggttgacgtgggcgacttt +aaaatttcaatcaatgaaggcctaccgtcaggtgtgccgtgcacatcccagtggaattccatcgcacattgg +ttactcaccctttgtgccctctctgaagtcacagacttgtctcctgacatagtgcaggccaactccctcttc +tccttctatggtgatgatgaaattgtgagcacagacataaaattggacccaggcaaactaacagagaagctg +aaagaatatggtcttaagcccacccgccctgacaagactgaggggcctttaattataagtgaagacctgaat +ggcctaacgttcctgcggaggacagtcacccgtgatcctgcaggatggtttggaagattggaccagagctct +atactaaggcaattgtactggaccaaaggtcccaaccatgaagacccttttgagtcaatgatcccacactcc +caaaggcccatacagctcatgtcactcctaggtgaagcagcattgcatgaaccctcattctacagcaagatc +agcaagttggtgatatctgaattgaaggaaggtggaatggatttttacgtgcccagacaggaaccaatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatcttgctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacctgtagctggtgccgccttggcagctccagttactggccaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaattcaccgtttccccgcgcaatgcccctgg +tgaagtgctattaaatctagaattgggtccagaattaaatccttatctggcacacttggcaaggatgtacaa +cggctatgctggtggcatggaggtgcaggtcatgctagctggaaatgcgtttacagc---tggtaaattggt +cttcgccgctgtgccacctcatttcccagttgagaatctgagcccgcagcaaatcaccatgttccctcatgt +gattatagatgttagaactttggaacctgttttattgccactccctgatgttagaaataactttttccatta +taaccagaaagatgac---cccaaaatgaggattgtggccatgctttatactcccctcaggtcgaatggctc +tggtgatgatgtgtttacagtttcttgcagggtgttaaccaggccctcccctgactttgactttacatacct +ggtaccaccaacagtagagtctaaaacaaaaccatttactctcccaatcctcacacttggtgagttatccaa +ttccaga---tttcctgtgtccatagatcaaatgttcactagccccaacgaggtcatatcagtgcagtgtca +gaatgggagatgtacgctggatggggagctccaaggaacaacacagctccaggttagcggtatctgtgcatt +caagg-----------------------------------------gagaggtgactgctcac--------- +-----------ttgcacga-----------------------------------------------ta---- +----atgaacacc----------------------------------tttataac----------------- +----------------atcaccatcacaaatttaaatggatccccttttgacccttctgaggacattcctgc +cccactgggtgtaccagactttcaagggagagtttttggtgtcatcagccaaa---gagacaa--------- +-----cc-----acaatgccagtggacataacc----agcctgc----aaacaggggccatgatgccgtggt +tcccacatacacagcccaatacaccccaaagttaggccagatccaaattggca---------cgtggcagac +tgatgacct---aacagtcaatcagcctgtca---------------------------aattcaccccag- +--------ttggccttaatgatgtgga------------------gcatttcaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctaaacacaaatcttgccccttctgttgcaccggtgtttccagggg +aacgactgctcttcttcagatcatacctccccc------tcaagggtggtta------tggca--------- +--acccagccattgactgcctgttaccacaagaatgggtgcagcacttctaccaagaggccgccccttcaat +gagtgaggtggcccttgttagatacattaacccagacaccggtcgggcgctgtttgaggccaagcttcacag +agctggtttcatgacagtctcgagcaacaccagtgccccagtagttgtacctgccaatgggtatttcagatt +tgactcttgggtgaaccaattttattctttagcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagctggtcttgcaggagacgtgctcagtaatgggctc +ggctcattgattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaa--- +------------------------------ttgcaacaaaattcttttaatcatgataaggaaatgttacag +gctcaagttcaagcaactaagcagctgcaagcagacatgatggctataaagcaaggggtcttgaccgctggc +ggcttctcccctgctgatgcagccagaggcgcagttaacgcgcccatgacacaagcgctggactggaatggt +acaaggtattgggcaccaggttccatgaggacaacatcttactctggaaggtt------------------- +-----------------------cacatcgactgctcc---------------------------------a +acaaggc----------------aggccgactt--------------------------------------- +------------------------------gcagcatgctcaaaaccgaccg---------------tcgag +tggttctt-----------ctgtg------------tcctcctattccactcaatcttcaagaccaaccctg +actacaacagtggggt-----cttcacacag------tgcagtcccatc----------caattcg------ +-------------------------------actcggagcacaaatctctctatgtccactgtttctagagc +cacttc---------------------------------------tagaaccagtgaatgggtcagggatca +aaataaaaatttggaaccctatatgc---atggtgccttacagacagcttttgtcacaccaccatccagcag +ggcatcc---gac---------------------------------ggga---cggtctcaaccgttcccaa +gggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcatag--t-----------gaaaaggtaa-------- +---a-a-tct----------ag---------------------------c-ttaaaat--------gaattg +-------a-----tctt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561248.1/1-7559 |Norovirus GII.17 isolate GII/Hu/HKG/2015/GII.17/CUHK-NS-613, complete genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agacgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttttcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +cctcctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggcggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KU561249.1/1-7558 |Norovirus GII.17 isolate GII/Hu/HKG/2015/GII.17/CUHK-NS-616, complete genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccattatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaatgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccaccgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggtttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaatccacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggcacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacactgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccgcaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaagacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------tagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaa-----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KY348697.1/1-7492 |Norovirus Hu/Guangzhou/GZ2013-L20/CHN/2013, partial genome +-------aatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtctggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggaggctgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagaatggaacaggaagcccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccgtcaaagacataataggaaaagtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggacaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------aatcgct---aaggatgggtgcccaaaaccccag-- +-gat----gatgaag---aatttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggcagatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggtacctatgaaccagcttacctcggcggcaaggacccc +agagttaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgacttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagacagaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttctacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaacaactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaaaacaaaacccttcactctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aatca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------ga---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY348698.1/1-7498 |Norovirus Hu/Guangzhou/GZ2014-L304/CHN/2014, partial genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaacaccacaa +agg---------------------cctccacggccacccaccccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgagctagtggtt +tcctacagcg----------ccaa---agatggcgtttctggtttgcctgaacttaccactgtccggcaacc +ggatgagaccaacacggcattcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagagaacaactggcttcttcagaccttaccaagagtggaacaggaaacccct +ccccaccatggatgactctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaagggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggtaggccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccactgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctagccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagctctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacaccatgagagttggaaaacagctcaaggatgttaagaccatgtcagagctcaaacagg +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaagagttgacagagttcagaacgccactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaagatacagagga--------aatcgctagcaaggatgggtgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtttcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaggaatacgatgagtata +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaaggaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtacccatcaaacaaattcagatacacaaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggcccaggaagtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccactcccacctggcacctatgaaccagcttacctcggcggcaaggacccc +agagtcaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaactcaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaggttacaaacctgtcccctgacattattcaggccaactctctcttt +tctttttacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgaagggccccttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgactcgcgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcgcccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtgtctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctgactagacctagccctgaattttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaaccctttaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgagaatattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------actagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctggggacaccagatttccggggcaaagtctttggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attaggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatactcacaaatactgta +gggtctctagttaatgcagg---ggctaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccaagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaat----------------gaaccaggccccaaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctag---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------ga---------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY887597.1/1-7549 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.3/NOR-2604, partial genome +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaaggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcatttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaagtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccaggtcaacaagcagagccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccctatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgactttgaaaataataaatacttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagatcc---------acaccaaactttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatatc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>KY887598.1/1-7533 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.3/NOR-2610, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaaggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcatttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaagtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccaggtcaacaagcagagccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccctatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgactttgaaaataataaatacttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagatcc---------acaccaaactttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatatc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>KY887599.1/1-7538 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.4_Sydney2012/NOR-2559, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagtaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgatt +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactactctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgctttgtctgaagtcaccaaactgtcccctgacattgtacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgagacagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatgt +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatacc------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagaggga +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaagagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>KY887600.1/1-7562 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.4_Sydney2012/NOR-2558, partial genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gcctcgagagacgaatcacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaacgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caattaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaatcgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaggatttctgtgaagaggaggagatcaaaatccgccaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatttgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtggactcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaagatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaatttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggaaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aagtaggaatctgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>KY887601.1/1-7570 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.4_Sydney2012/NOR-2565, partial genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaat +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtccctcaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacgttattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggaatctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggggaatacgagttgcaagggccagaggacctcgctgtgga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactgaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtacgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcaatctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gac-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactacatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgctacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaggccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggatgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagctttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaagtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtccaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgtcacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>KY887602.1/1-7547 |Norovirus GII isolate Hu/UK/2015/GII.P16_GII.4_Sydney2012/NOR-2516, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatactggcaacgtgtgattg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaattaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctaaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgtaagacaattagaacctgtgctgattcccttacccgatgtcaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaagg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>KY887603.1/1-7547 |Norovirus GII isolate Hu/UK/2015/GII.P16_GII.4_Sydney2012/NOR-2515, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------tcaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatactggcaacgtgtgattg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtggaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagttac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaattaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcagatactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacagaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcgggcagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcgccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaactctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaagcattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagcgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctaaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccacat +aatagtagatgtaagacaattagaacctgtgctgattcccttacccgatgtcaggaataacttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatctggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggcagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaagg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>KY887604.1/1-7547 |Norovirus GII isolate Hu/UK/2015/GII.P16_GII.4_Sydney2012/NOR-2518, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccaagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacccgcagccataagcatggcaagggtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggttatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacagccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagaact +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctgc +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtgcagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggtttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaatttttcgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcgttt +ggagtccccatcaaacaaatccagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaagggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaactacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccctaatgagacaatgataccccatgct +caaagacccgtacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtctcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttactccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtggcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +tcaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>KY887605.1/1-7546 |Norovirus GII isolate Hu/UK/2015/GII.P16_GII.4_Sydney2012/NOR-2520, partial genome +----------------------------c-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggccaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatactggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggtgttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caacttcgaggcctg-ttccaggagaattgatttcttggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagtcttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgcgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---aggtcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaagccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaggctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggattttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatttataaaaggggcaatgactatatagtcattggggtgcacaccgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +aacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcaacaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggcgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggacagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattctacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaagttg +aaggagtacggcctgaaaccaacccgcccagacaagaccgaaggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgaatcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaggcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtagatgttagacaattagaacctgtgctgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatctcccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgcttacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +caatgattt---agaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccctaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaaattttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +taaatctt-----------ctaac------------tcttctattgccacctctg----------------- +-------------tgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggagtttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ttttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------------------------------- +------------------------------------------------------------------------ +- +>KY887606.1/1-7549 |Norovirus GII isolate Hu/UK/2016/GII.P16_GII.3/NOR-2598, partial genome +----------gaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccctaagaccaccaactcccgagttggtc-------aagaagatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtacgagg----------ttaa---gagtgggatctctggcctgcccgagcttacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctggcgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaaggaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcatttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattttccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaagtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggttgtccttacatctataaaaggggcaatgattatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattattaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgaaaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcggcagccttggaaatcatgg-ttagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccgtgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacatcatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccagtgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagtccttcttaatttggaactgggcccagaaataaatccctatttggcccatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccatcccccccaattttccaattgacaatttaagtgcagcacagattacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccagtcaacctcccgatgcctgacgttcgcaacaacttctttcatta +taaccaagggtctgac---tcgaggttacgcctaattgcaatgctatacacacctcttagggcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgttaactagacctagtcctgatttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttttccctccctatcctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctacataccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgaactgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggggcgttctcaccaggtcaacaagcagagccagtgaccaggccgatacagcaacccct----------- +-----------agattgt------------------------------------------------t----- +-----------ta----------------------------------attat-------------------- +-------tattggcacatacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaatcctg------- +----------------------atgccacgact--------agg-----------gcgcatgaggcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagagatatcca---------ct---gaatc +tagtgattt---tgaccaaaaccaaccgacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gaccatgaggcagac---------tttcaacaatggaccctacccga +ctatgctggtcag-ttcaca------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgcca------tcttctggtgggcg------atcca--------- +--acgggattctagactgcctggttccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaatcctgacactggtagagtgttatttgaggccaagctacacaa +attaggtttcatgactatagccaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccctatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgactttgaaaataataaatacttg +caaaatg---------------------------------cttcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaagttacaggctgacatgattgctatcaaacaaggggctttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttacacatcaa--------- +ac---------------------tgtgcacagatcc---------acaccaaactttaaaacgaaccag--- +gccccca----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtctacagtgaggtcaaactca------------------ac +ccaaatca-----------ctagc------------ctgagctcacactcgtccg----------------- +-------------ggt-----cgtctcgatc------cagcgggtctac-----------ag---------- +------------------------tcatcagctcaatatc-----------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtctctccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctatttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-a-t-ttta-----aa------------tttggtt----------t--------------aaatta +g-gtttaatttg-g--a---atcttttaaaaaaa-------------a------------------------ +------------------------------------------------------------------------ +- +>KY421121.1/1-7536 |Norovirus GII.2 isolate JS1208, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagtttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattggagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacagagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtggttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtagaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcattggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacctctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaacgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggtatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------agtaatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcagacggacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagcaagaggtgctgtgaacgcgcccatgacacaggcgatggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaataaaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY421122.1/1-7536 |Norovirus GII.2 isolate BJSMQ, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagccc-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcagtattagagatgtgggatggagagatataccactatggcctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatatttctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataaggccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccctattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaacctcgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgatgcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgtccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgtcgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggtagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcctaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgataggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaacgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagcctttcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaagacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtatggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggctc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggtagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcactaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----accacaagcctcccccaatcaacggtctc------aacag------------------c +tacatc---------------------------------------taggactggtgagtggataaaagatca +aaataaaaatttggaaccctacatgg---atggcgccttaaagacagcctttgtcaccccaccttccaggag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccggaagcagccgctttttgcac +acctccgtaagagggaggagtcaca--------agcttaa--t-----------gaagaggtga-------- +---a-t-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KX586330.1/1-7509 |Norovirus GII isolate Hu/NOV/GII/CHN/ZJ01, complete genome +--------atgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccactcacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgataataattgctacgccttttgttgttgggtgttagacctgaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgactaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaagctctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagttggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctgtgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctgaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgtaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtagact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggtgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggagggaacactgtcatatgtgccacccaggggagtgagggggaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccgcctggcacttacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttgggggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctcttt +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccagaggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtacccagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaaccgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaaccgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgcccggggttcctcc------------------ag +taagcctt-----------ccaat------------tcttccactgttactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY865306.1/1-7499 |Norovirus GII strain Hu/USA/2016/GII.P16-GII.2/Santa Rosa 1764 polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaacggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggagccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgttgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaaccctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaatagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattgaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagctatggtgagggccatagaggatgctgt +actagaccttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagtaggataaggccagtagttgttatgatatctggcaagccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctatgggacgactatggcatgagtaaccctattca +tgatgcccttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggcc +ccacaatcaccaccttcaatttcgaccgaaacagaatcacggcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgaaagttggcaaccaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaataacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaact---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggctctggctggg +gcttctgggtgtcac-caagcctttttataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggcgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacactgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtgatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcttgtgcctcacttgacaaaaccacctccagcgggcacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggcttatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagttctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttc +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagtaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattcc +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccaccccacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taaccagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtattgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaaattatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaggtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgtcaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctttgggtgtgcctgatttccagggaagggtttttggtatcatctcccaaa---gagataaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +tcctacttacacagcacagtacactccaaaacttggacaaattcaaattggca---------catggcaaac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacac---------tttaaccaatgggtggtccctag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacgggtacttcagatt +tgattcttgggtgaaccaattttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaattcgattttaatcaaaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtaaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---aac---------------------------------ggga---cagtctcaaccgtccctaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY865307.1/1-7497 |Norovirus GII strain Hu/USA/2016/GII.P16-GII.2/Nashville 2122 polyprotein, VP1, and VP2 genes, complete cds +------gaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccagcc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgattcatggct +tag---caggaggatggtacaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaaggaccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaacccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgagctccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattctatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgaacgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattaggactagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacgtactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaag +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggtatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacagacaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctcg +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgttcacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctctcaaa---gagacaaacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtggctgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcggg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactttgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtccc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY947546.1/1-7546 |Norovirus GII strain Hu/USA/2015/GII.P4 New Orleans-GII.4 Sydney/Titusville 7426 polyprotein, VP1, and VP2 genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttccagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggagataccacaa +aga---------------------cccccacgaccacctaccccagaattggtt-------aaaaagatccc +ccc-----------------------------ccctccgcccaacgg------agaggatgaaatggtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaagcaacc +ggaagaatctaacacggccttcagtgtccccccactcagtcagagggagaatagggacgccaaggagccact +tactggatcaattttggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtctcgt +gctaggtgtacacaaaccaccagctgccatcagcctcgctaggattgagctagcaccactctccttgtactg +gagagctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagagacgtt +cccctacacagcctttgacaacaattgttatgccttctgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccaaagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcctcgctattcac +caggcccataaaggatataatagggaagttaaagcctctcaatatcctcaacatcttagcctcatgtgattg +gacctttgcaggtatcgtggagtccctgatactcttggcagagctcttt---ggggttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatgggtggaattggtttggtactaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagaaatcctaaagttggt +catgaagtggttcttcccgaaaaaggaggaagcaaatgaactggccatagtgagatctatcgaggatgcagt +cttggatctcgaggcaattgaaaacaaccacttgaccaccctgctcaaagacaaagacagtctggcaaccta +catgaaaactcttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcgcctgacattgt +gggcacaatcaacgcccttctggcgagaatcgccgccgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgatgatgatatcaggcaggccaggaatagggaagactcaccttgctag +ggaagtggctaagagaatcgcaacctcccttacaggagatcagcgtgtaggcctcatcccacgcaacggcgt +cgaccattgggatgcatacaagggggagagggtcgtcctttgggatgattatggaatgagcaaccccgttca +tgatgccctcagattgcaggaactcgctgacacctgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcattattatcaccactaacctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagtcctgatttctcacatataaaactga +cactggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaagggtgtcatgaagaccctca +ccactggctccctcattgcccgggcatctgggttactccatgagaggttagatgagtttgaactacaaggcc +caaccctcaccaccttcaatttcgaccgcaataaagtacttgcctttagacaacttgctgctgagaataaat +atgggttgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatacttgaatctgatg +gcaagggtaatgtgaaagttgacaaaacccagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcatcatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggagccgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaagacgggtgcccaaaacccaaa-- +-gac----gatgagg---agttcgtcatctcatccgacgacatcaaggctgagggtaagaaagggaagaaca +agactggccgcggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagggaagaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgaaaggaggaaagagcttctctcggcctagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggatt +ataacgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gattttgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggtgcaaaagagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtagttacattactcatcaag +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcaactatgaagatccaagggcgc +actgttgggggccaaatgggcatgcttctgacagggtccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gctcgcggaggaaacactgtcatatgtgctacccaggggagtgaaggagaggctacacttgaaggtggtgac +gacaaggggacatactgtggtgcacccatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcatccacagcaccactcccacccggcacctatgaacctgcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagttatgagggaacagttaaagccattcacagagcccaggggc +aaaccaccaaaaccaagtgtgttggaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgtgcgtcccttgacaagaccacttccagcggccatccccac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggctgaccaggcttccaaggcc +aacctgatgtatgaagaagggaagaatatgaccccagtctacacagctgcactcaaggatgaattggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccgctgc +gctcgagcgttcggaggcttaatggatgaactcaaagcacactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcttag-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgtacctctcaatggaattctgtcgcccactgg +cttctcacactctgcgcgctctctgaagtcacaaacttgtcccctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaagttggacccagagaaattgacagcaaagctc +agggaatatgggttgaaaccaacccgccctgataaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacctatacaactgatgtccctattgggggaggccgctctccacggcccagcattctacagcaaaatc +agtaaattggtcattgcagagctaaaagaaggcggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggctagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattagaacctgtgttgattcccttacctgatgttaggaataatttttaccatta +taatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacggtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggtaccacccagttatctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggtcggatggctcgaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaaactaaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaagatggtaccactgcccaccgaaatgaacctcaacagtgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactgctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttattccccccaatggttactttagatt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaagaagctacaacaggaaatgatgaaagtcaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaattttagggatgt------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +taaatctt-----------ctaat------------tcttctactgtcgctt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggttccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggtgctt------------tcaacacgcacaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcttaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttta----------c-at----cac------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY947547.1/1-7554 |Norovirus GII strain Hu/USA/2014/GII.P4 New Orleans-GII.4 Sydney/Ellsworth 7118 polyprotein, VP1, and VP2 genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagcgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacctaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtctccggcttgcctgacctatccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaatcctggaaatgtgggacggtgaaatctaccactatggcctgtatgtggagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctccccagacactcttaagaaactatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +aag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggccaacattttcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgttcccgtggtgatggggggaattggtttggtgctaggattcaccaaggagaagattgggaagatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttctttccgaaaaaggaggaggcaaatgagctggccatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaatcacatgaccaccttactcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcaaaggaggagct +ttccagcagaccaagacctgtggttctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggccaacccagcaccactggactatgt +caactttgaagcgtg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccgcagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgagtttgaactacagggcc +cagctctcaccgtcttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacaccatgagagttgggaaacagctcaaggatgtcaggaccatgccagaacttagacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtacagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgagggttgacagggtccaaaacgccgccgtgcagaccaataatgagctggctggtgctc +tgcaccatttgaggtgcgccaggattagatactatgtcaagtgtgtccaagaggccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaaa-- +-gat----gatgagg---agtttatcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcgttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggatcagggaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtagccattgccagggcgactgaggaagacttctgtgaagaggaagaggccaagatccggcaaa +ggatttttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +atagtgagaaactcaattttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +ggttctgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccctatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcgcctgagggcaccgtggtcacactactcatcaag +aggtccactggggaactcatgcccctagcagctaggatggggacccacgcgaccatgaagattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaagctacacttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagactaaa +ttctggagatcgtccacaacatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcgctgcagcaagttatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagcgtattagaagctgccaagaagaccatcatcaatgttcttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcattatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacacct-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaatttgtccccagacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagtacagatataaaattggacccagagaaattaacagcaaagctc +agggaatatgggttgaaaccaacccgccctgataaaaccgaaggaccccttgttatctctgaagatttaaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccttctgagacaatgattccacactcc +caaagacctatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctaaaagagggcggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtcattga +cccctggattagaaacaactttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctaaatccctacctatcccacttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattcttgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccctagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgatccctttacccgatgttaggaataatttctatcacta +caatcaattaaatgat---tccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcctgtcgagtcctcacgagaccgtcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccgattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gccata----------------------------------actacaca----------------- +----------------atgaacttggcttcccaaaactggaacagttacgatccaacagaagaaatcccagc +tcctctagggactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgaca--------cgc-----------ggccacaaggctacagt +gtacactgggagcgccgactttgctccaaaactgggtagggttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcgggcaga-aatact------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagttcttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtaaatccagacacaggcagggttttatttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgactcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctgcaacaggcttcttttcaacatgacaaagagatgctccaa +gcacaaattgaggccacaaaaagattacaacaggagatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggcacccgatgccaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gggctaatcttagggatgt------------------------------ +------------------------------tgttcccgctcggggttcctct------------------ag +caaagctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggacca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>KY947548.1/1-7457 |Norovirus GII strain Hu/USA/2015/GII.P16-GII.13/Carlsbad 4246 polyprotein, VP1, and VP2 genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaacat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccgagaccaccaactcccgagttggtt-------aagaggatgcc +ccc-----------------------------tcccccacctaacgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgttgggtattagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgctcattgtccacgttgttcac +cagacctataaaagacctcatgggaaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctcttatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaggggccagaagaccttgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaactggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactttgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaggccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +gtctagcaggataagaccagtggttgttatgatatctggtaagccagggataggcaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaacctcgccaatccagctccacttgattatgt +taactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagattttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagctgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatggaaaaggagtgatgaagaccctca +ccaccggctccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgaccatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgacg +gtaagggcagagttctggtggaaaaggtcaagaacacctccgtacagaccaacaacgaattggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaaacagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agatcaaattga--------atcagagaccaaggaagaggcccccaagttagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgactttaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcacgtaatccctgcaggcataacagaggcattt +ggagtccccatcaagcaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgcttatcaaa +cgccctaccggagagctcatgccccttgcggccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaacccttgagggtggagat +gacaaaggaacatattgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcacccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacatatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccccgacattgtacaggcaaactccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggagaacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaacgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacaaactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagttcacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagatttgaatccttatttggcccatctgtcaaggatgtacaa +tggatatgccggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttaccagatgtcaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgactttgaatttatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtatacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgctatcaagtgcagtttgctctta +caggg-----------------------------------------gtaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatctgctccagctgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaggatttcagtgggatattgtatggggtgttaacccaag---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctacgcaggtgct-ctcgct------ctaaacaccaatttggcacctgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgtcccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgctctcatcaggtatgtcaaccctgacactggtcgcacgctgtttgaggccaaattgcacag +gtcaggtttcattactgtgtcacacactggtacctacccccttgtggtccccccaaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgcaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagccggtgacatgctgacttctgctgtt +ggttcgctgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaataaacaactc +caaaacg---------------------------------catcctttcaacatgacaaggaaatgttgcag +gcccaaattgatgctacgaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctattacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----caggggggtcctctacaatctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggata-------- +---a-t-c-------------------------------------------aa-------------c----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY947549.1/1-7530 |Norovirus GII strain Hu/USA/2016/GII.P16-GII.4 Sydney/CS4243 polyprotein, VP1, and VP2 genes, complete cds +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaagaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgccttcgacaacaactgctatgccttttgctgctgggtgttggacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaagattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgaattgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaagaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataatcacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgattttctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacactccacatgggaagggagtgatgaagaccctca +ctaccggttctctgattgcccgcgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcaggcaattggctgcggaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagctggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcgcgccgcatga------acatacaggaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtacgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagattcacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttagaagaaggtgcgcctgaaggcaccgtagcaactgtgcttatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagccattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacctattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttaaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcatcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcgcactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcactgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +taaccagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgctcctaggcaccacccaattgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccatcgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatgct------cacaatgtacatctggcccctgctgtagcccccaccttcccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggtgctttctttgctggattggcatccgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaac------------tcttctactgccacctctg----------------- +-------------tgt-----actcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tg----------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY947550.1/1-7555 |Norovirus GII strain Hu/USA/2015/GII.P16-GII.4 Sydney/Pasadena 3477 polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctagc------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaagagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gt-------------------------------------------------- +------------------------------------------------------------------------ +- +>KY496327.1/1-7580 |Norovirus GII strain Hu/USA/2012/GII.Pe_GII.4_Sydney/WI2138, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aagaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggactggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgagctggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaagcaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaggacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacagagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacagatggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gag----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaattagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgagaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaagggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaaa +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagtcatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagactacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggctttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattctatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcagtcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcactgg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaggctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttttactgctactt-------------------- +----------ctgtgc-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>KY905330.1/1-7491 |Norovirus GII strain Hu/GII.P17_GII.17/NSW9428/2016/AU, partial genome +-------------------------------------ccgctgccgttgctggcaa---------agacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggctgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagttagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggtttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaaaaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagaaaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtgagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttttatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaagcagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctctgca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaatttacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--g--------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY905331.1/1-7546 |Norovirus GII strain Hu/GII.P4 New Orleans 2009_GII.4 Sydney 2012/NSW789Z/2016/AU, partial genome +---ctagaaagcacwy---ggcctctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccacaccagaactggtt-------aaaaatattcc +ccc-----------------------------ctccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggttttgt +actaggcgtgcacaaaccgccagctgccatcagcctcgctaaggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtggctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatcagctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaagcaattgaaaataatcatatgaccaccttgcttaaagataaagacagtctggcgaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccaacgtgttggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctttgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagccccactggactatgt +caactttgaagcatg-ctcgaggcgcattgatttcctcgtatatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcaggactactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaagggtgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +aaactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggatcagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagagcgactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatctttaggccaacaaggaagcaacgcaaggaggaaagagtctctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatttggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagcttgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaata +aggactgatgtgtcgggcatgatcttagaagaaggcgcacctgagggcaccgtggttacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggatctgggtaccacacca +ggtgattgtggctgcccctacatctacaaaaggggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacggagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagagaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatctatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-taaaattctccc +cagaaccacattt-ggctcaggtagttgctgaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctgtctcctgataccatacaggctaactctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatggattaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagatccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactaggggaggctgctctccacggcccagcattttacagtaagatt +agtaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +caatcagtcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtctagaactaaaccattctctgttccagttttaactattgaggagatgaccaa +ttcaaga---tttcccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacggt +gtacactgggagcgccgactttactccaaaactgggcagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcattcaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgttcatctggcccccgctgtagcccctacttttccgggtg +agcagcttctcttctttaggtccaccatgcccg------ggtgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggagtggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaattcagcagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagccttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +caaatctt-----------ttaac------------tcttctactgctaatt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtctcctttcatga---ggggggcccacaacata------gtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcttaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a---------------------------------------------------------------- +------------------------------------------------------------------------ +- +>KY905332.1/1-7533 |Norovirus GII strain Hu/GII.P17_GII.17/NSW543Q/2015/AU, partial genome +--------------at---ggcctctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagaaaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgaatggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaaccggattcttcagaccgtatcaggattggaacagaaagccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agacgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggagtaggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctagggtcttatggattggagatactcaaattggt +tatgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacgta +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaagcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaactcc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaagggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggatacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttataggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaagggatcactgaggccttt +ggagtacccacaaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggtacaacgcca +ggtgattgcggatgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggcacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctagaacaaaccattgac +ccccctcaaaaatggtcatatgcccaagcttgtgcatccctcgacaaaacaacctccagcggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccaatttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacagataccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaattgctatcaatgaaggcctaccatctggcgtgccttgtacctctcaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagtacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaacacattcttccatta +taacaaccagcctaac---aaccgcatgagattagtggctatgctctacactccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttctttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagttcccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgatttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgacgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctacagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ttactcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacggggcgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggctcccaattccacaaagacaactggttattcaggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcaagccaccctcaagtag +ggcttct---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttg-------------------------------------------------------- +------------------------------------------------------------------------ +- +>KY905333.1/1-7497 |Norovirus GII strain Hu/GII.Pe_GII.4 Sydney 2012/QLDB101/2016/AU, partial genome +---------------------------------------------------------------------agc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccagcacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctatacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgctagggtcgagctagcaccgctctctttgttctg +gagacctgtatatacccccc---agtacctcatctccccagacacccttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgctgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaactaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcctccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaagtctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaggccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggccttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataatcatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaaggtacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaataacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactatctggtgccc +tacaccacctaaggtgcgctagaatcagatactatgtcaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaaaagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccaaatacacaagtcaggtgaattctgccggttgagattcccaaaaccaatc +agaactgatgtgactggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactatgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacccggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgctggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaactggctgatcaagcctccaaggcc +aacctaatgtttgaggagggaaagaacatgactccggtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaaaaagaggcttctgtggggttcagatctagcgaccatgatacggtgc +gcccgagcttttgggggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattac +t-cccggtgggactcaacacaacaaagggacgtactagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaggtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagatataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcctaaccatggagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccctgggccctgatctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcctgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaacggcaggtgcacgaccgacggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaacttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtagggaagattcagggcgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttcaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccagcagtgggtgcttccaag +ttactcaggcaga-agtact------cccaatgtgcatctggccccagctgtagcccccactttcccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagcacttctaccaagaggcggccccagcaca +aactgatgtggctctgctaagatttgtgaacccagacacaggtagggtattgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagtcaagcaggcaatgctcctggagggt +ggattctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccctgcccggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------tttac----------t-t-----t--------tc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY905334.1/1-7498 |Norovirus GII strain Hu/GII.P12_GII.3/QLDB207/2016/AU, partial genome +--------------------------------------------cgctgctgct------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagccc-cccccgagggaaacatcacaa +agg---------------------cctccacgaccacccaccccagaactggtg-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggacgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgaactcaccactgtccggcaacc +ggatgaggccaacacggcgttcagtgttccccctctcaaccagagggagaacagggacgccaaggagccgct +gaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactggcaccactctctctattttg +gaggccagtgtacacaccac---agtacctcatctctccagacactcttaggagactgcatggagagtcgtt +cccctatacagcttttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgattcagagaacaactggcttcttcagaccttaccaagagtggaacaggaaacccct +ccccaccatggatgattctaaattgaaaaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgctcaacatccttaatatcctggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgcccccttactaggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggagggattggtttggtgttaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcttccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaatgagctagctatggtgaggtccatcgaggatgcggt +actggacctcgaagcaattgagaacaaccatatgactgccctccttaaagacaaagacagcctggcaaccta +catgaggacccttgacctcgaggaggagaaagccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaagacctgttgttgttatgatatcaggtaggccagggatagggaagactcaccttgccag +ggagctagccaaaaagatcgcagcttcgctcacaggggaccagcgcgtgggcctcatccctcgcaatggcgt +tgaccattgggatgcatacaagggagaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgacaggattgagaataa +aggaaaggtctttgacagtgatgccataatcatcaccactaatttagctaacccagcaccattggactatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagcccctgaggtcgagaaagcaa +agcgtgacttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaagactctca +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactcccaccacctttaattttgaccgcaacaaggtgcttgcgttcagacaacttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgttaagaccatgccagagctcaaacagg +cactcaagaatgttgcaatcaagagttgtcagatagtgtatggtggctgcacctacaggcttgagtctgatg +gcaagggtgatgtaaaagttgacagagttcagaacgctactgtacagaccaacaatgagcttgccggcgcac +tacaccatcttaggtgcgccagaatcagatattatgtcaagtgtgttcaggaggccctgtattccatcatcc +aaattgctggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ctaagccacaggtggaggatacagagga--------aatcgctagcaaggatggatgcccaaaaccccag-- +-gat----gatgaag---agtttgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaaaaaca +agtctggccgtggcaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagagacaggtat---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaagatccgacaga +ggatcttcaggccaacaagaaaacaacgcaaagaggagagagcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggtgtatccatcaaacaaattcagatacataaatcaggtgaattctgccgcttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaaggaaccgtggtcacattactcatcaaa +agaccaactggagagctcatgcccctggcagccagaatgggaacccacgcaaccatgaagatacaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagcatggacctgggcaccacacca +ggtgactgtggctgcccctacatttacaagagggggaatgactacgtggtcattggggtccacacagccgcc +gcccgcggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaggtgccccaaaactcagcaccaagaccaag +ttctggaggtcatccacggcaccacttccacctggtacctatgaaccagcttacctcggcggcaaggatccc +agagtcaagggtggcccttcactgcaacaagttatgagggatcaactgaaaccattcactgagcctaggggt +aggccaccaaaaccaagtgtgctagaagctgccaagaaaaccatcgtcaatgtccttgaacagacaattgac +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgataagaccacttctagcggtcatccgcac +catatgcggaagaacgactgctggaacggggagtccttcacaggaaaattggcagaccaggcttctaaggcc +aacctgatgtttgaggagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggtaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcgggggtctgatggaggaacttaaagcacattgtgtcacactacctgttagggtgggtatg +aatatgaatgaagatggccctatcatctttgagagacactccagatataaatatcattatgatgctgactac +t-cccggtgggattcaacacaacaaagagccgtgttggcagcagccttagaaattatgg-tcaagttttccc +cagagccgcacct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggagtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcactctccgaagttacaaatctgtcccctgacattattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattagacccagaaaaactgacagcaaaactt +aaggaatatgggttgaaaccgacccgccctgacaaaactgaagggcctcttgtcatttccgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgtgacccagcaggctggtttggaaagttggaacagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggcagcactccacggcccagcattctatagtaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggccaacaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatctcctaggaattcccctgg +tgaagtgctcctcaatttggaattgggcccagagataaacccctatctggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaacttcccaattgacaatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcaggcagttggaaccggtcaacctcccgatgcctgacgttcgcaacaacttcttccacta +caaccaagggtctgat---tcgagattgcgcttggttgcaatgctgtacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgttgactagacctagccctgacttttcatttaacttcct +tgtgccacccactgtggagtcaaagacaaaacccttcaccctcccaattctgactatctctgaaatgtctaa +ttctagg---tttccagtgccgattgattccctgcacaccagcccaactgagagtattgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccactcagctcttacctagtcaaatctgtgcttt +caggg-----------------------------------------gcgtgctcactagat----------- +-----------caacaagcagg------gctagtgaccaggccgacacagcaacccctagattgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacacaccagg +ccccctggggacaccagatttccggggcaaagtcttcggcgtggccagccaaa---gaaa------------ +-----cc------------ccgacagtacaact--------aga-----------gcacatgaagcaaaggt +ggacacaacagctggtcgcttcaccccaaaactaggctcattagagatatcc------------actgaatc +tgatgactt---tgaccaaaatcaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgaccg------------cgaggcagacttccaacaatggtccttacccga +ctactctggccag-ttcact------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--atgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcagcccccgccca +aacccaggtggctctggttagatatgtcaaccctgacactggtagagtgttgtttgaggcaaagctgcacaa +attaggcttcatgactatagctaagaatggtgattctccaataactgtccctccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtagg---------ag +agttc---------aataatggctggagcttttatagcaggattagctggtgatatattcacaaatactgta +gggtctctagttaatgcagg---ggcaaatgttattaaccaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttccttcaatcatgataaggaaatgttaaat +gcacagattgaggcaacaaagaggttacaggctgacatgattgctatcaaacagggggttttgaccgctggc +ggcttttcccccactgatgcagctcgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acaaggtactgggcaccgagtgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgcgcacagaaccacaccaaat---------------------------------t +ttaaaat----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +ctctcaacccaagtcac--tagtctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgagtcta--------------------------------cagttgctagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaatcagca +aaatttcaatttggaaccacacatgc---ctgggtcacttaggacggcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------at-ttaa-attggatttga----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY905335.1/1-7529 |Norovirus GII strain Hu/GII.P16_GII.4 Sydney 2012/QLDB309/2016/AU, partial genome +------------------------------------accgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacggaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgaga----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gctgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgaccccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgctgaactcttc---ggaattttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaacaaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaggccagaaggttgtccacaaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtagcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcttg-ttccaggagaattgatttcctggtgtatgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcatggcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctatggcggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagagcacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaagcga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgatttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaagctggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gtttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccacaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattctgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagac +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaga +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagctaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacgtacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatcctcat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatagaaagattaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgcagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaagccaacccgtccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaggcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagttctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacaagaccatcctccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +acctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccataaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatatgaaa---------ctgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacacctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcttttcaacatgataaagagatgcttcaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgagagttaagcaggcgatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaat------------tcttctgctgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agggattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttctttct-------tt-------------ttctt- +-------------tagt------------------------------------------------------- +------------------------------------------------------------------------ +- +>KY905336.1/1-7527 |Norovirus GII strain Hu/GII.P16_GII.2/Brisbane/QLDB411/2016/AU, partial genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaagccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctatgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgctattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttggcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccagggaacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtatactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgtctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgatcaatgcagg---tgctaatgcaataaatcagaaggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---acc------------------------------------------------- +------------------------------------------------------------------------ +- +>KY905337.1/1-7522 |Norovirus GII strain Hu/GII.P16_GII.2/Brisbane/QLDB512/2016/AU, partial genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacaaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaagaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctatgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gattctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagggcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>KY905338.1/1-7522 |Norovirus GII strain Hu/GII.P16_GII.2/Brisbane/QLDB614/2016/AU, partial genome +---------tgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaactacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcataaaccacctgcagccgtaagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggagactcaacggagaggcatt +cccttacaccgcctttgacaataactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgtgtgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaggggccagaagacctcgccgttga +actcgtacctgtggtaatgggggggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagttagccatggtgagggccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +atctagcaggatgagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaggtcataataattacaacgaaccttgccaatccagccccacttgattatgt +taactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgagagttggcaatcaactaaaaggagtgaaaaccatggaggaacttaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctatgtacagaccaacaacgagttggctggggctc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagga-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactccatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacagggatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttatatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgaacctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacttccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatggtccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtactagcagcagccttggaaattatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgttggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccctctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ttgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccaccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggactcactttcctccgaaggacagtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcactggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgctggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccagttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttgttaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgcagagtgttgactagaccttcccctgactttgacttcacatacct +ggtgccaccaacagtggagtctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttctaa +ttccagg---ttcccagtgtccatagaccagatgtataccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaggggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggatatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctcccaaa---gagacagacacaatag +tcct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccccacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaaccaatgggtggtccccag +gtatgctggcgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtatttccaggag +agcgcctgctcttcttcagatcatatattccc------ctcaagggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattgatcaacgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaaacaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaagcgctggattggaatggt +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtc-----cctcacatgg------cacagtctcatc-----------aa--------at +tcaactcgc----agtacaagcctctcccaatcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tt--------------------------------------------------------- +------------------------------------------------------------------------ +- +>LC258403.2/1-7420 |Norovirus Hu/GII/JP/2017/GII.P17_GII.17/Tokyo330021 POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, small basic protein VP2, partial and complete cds +---------------------------------gcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgactctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgtaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctctgccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggctactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcgccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcctagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacaca------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC133344.1/1-7509 |Norovirus Hu/GII.4/OsakaSB2-1/2014/JPA genes for non-strustural polyprotein, major capsid protein, minor capsid protein, partial and complete CDS +------------------------------------------------gttgcc------------aatagc +a------ac----aacgacatcgtaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcctcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagttggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccattgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacaacttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaactacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agggattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-t-----t--------tcttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY771081.1/1-7546 |Norovirus GII/Hu/HK/2016/GII.P16_GII.2/CUHK-NS-1082, complete genome +----gtgaatgaagat---ggcgtcgaat-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaagaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacaaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaagaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcatttagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagctgacgccgctgtcattgtactg +gcgtgtggtgtacacccccc---aatacctcatctcccctgaatctctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagaccttaatgactcatggct +tag---caggaggatggtacaaagaacaacgggcttctttagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacattattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaatatcctggcaacgattgactg +gacttttgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtgatgggggggattggcttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagagccatagaggatgctgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccaggaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcgttagtccacagggccaaggaagagct +atctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccacgaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttttcacacatcaagctac +agcttgcaccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcatcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaaccaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaattaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccagatcatctacggtggttccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggctggggccc +tgcaccatctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaagacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggctacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacaggagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtgtcac-caagccttttcataacatcaactcatgtaatccccgcaggcataacagaggcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggacttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggtgcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccttccctgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaactggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcgtatcactcccagtccgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaatatcactatgatgcagactac +t-ctcgttgggattcgacacaacagagggcagtactagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagttgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaattacaataaatgaagggctcccttctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacaattaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaaaaccgagggacccctgattatcagtgaagatttgaac +ggtctcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctttttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgaaatgcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgcctcctcacttcccggttgaaaaccttagcccacagcaaatcaccatgttccctcatgt +gatcatagatgtgagaaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaagatgaggattgtggctatgctttatacccccctcaggtctaatggttc +aggtgatgatgtgtttacagtctcctgtagagtgttgactagaccttcccctgactttgacttcacgtacct +ggtgccaccaacagtggagtctaaaacaaagccattcaccctcccaatcctcacacttggggaactatccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacactggacggggagctccaagggacaacacaactccaagtcagtggcatttgtgcttt +caaag-----------------------------------------gtgaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatataatgttaccatcacaaacttgaatgggtccccttttgatccctccgaggacatccctgc +ccctctgggtgtgcctgacttccagggaagggtttttggtatcatctctcaaa---gagacaaacacaatag +tcct--------ggtcataatgaaccagcaaac--------agg-----------ggacacgacgccgtggt +ccctacttacacagcacagtacactccaaaactgggacaaattcaaattggca---------catggcagac +tgacgacct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccctag +gtatgctggtgcc-ctaaac------ctcaatacaaaccttgccccttctgttgctccagtgtttccaggag +agcgcctgctcttcttcagatcatacattccc------ctcaaaggcggtta------tggaa--------- +--acccagccattgattgcctactaccacaagagtgggtgcaacacttctatcaggaagcagccccttcaat +gagtgaggtggccctcgtcagatacatcaacccggacactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaatcaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaattg +cagcaaa---------------------------------attcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcaaggggtcttgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaaactccatgaggaccacatcttattctggaaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgact----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------gagtgg---------------- +------------------------------ctcctctgtgtcttccttcgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctggtt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccagtcaacggtctc------cagag------------------c +tacatc---------------------------------------taggactggtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtcccgaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttcttgcac +acgtccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-a-------------------------------------------tt-------------tattta +g-gatgaattga-tttt---accttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KY442319.1/1-7527 |Norovirus GII.3 strain Hu/US/1972/GII.Pg_GII.3/ShippensburgB24, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaactagtat +ggctgtcacttttaaacggg----ccctcggggcccggcctaaacagccg-tccccgagggaaacaacacaa +aaacaaaa---------------gcccccacgaccgcccactccggagttggtc-------aaaaagatccc +gcc-----------------------------tcccccaccaaacgg------ggaggacgaactagtggtc +tcctatagtg----------ttaa---agacggcgtctccggtttgcccgaactttctaccgtcagtcagcc +gaacgaggccaacacagcattcagtgtccccccactcaatcagagggagaacagggacgctaaagagccact +aactggcaccattctggaaatgtgggacggggagatctaccattatggcctgtacgtggaacggggcctggt +gctcggagtacacaaaccaccagcggctatcagtcttgccaaggttgagttgacaccactgtctctatactg +gagaccagtgtacacccccc---agtaccttatagctccagacactctcagaaagctacatggagagtcatt +tccttacacggcctttgacaacaactgttatgccttctgttgctgggtcctagacctgaacgactcttggct +tag---caggagaatgatacagagaacaactggctttttcaggccctaccaggactggaacagaaagcccct +ccctaccatggatgactccaaattgaaaaagatggccaatataatcctgtgtgctttgtcatcactgttcac +caggcccatcaaggatataattggaaaattaagacctttaaacatccttaacatattggcttcctgcgattg +gacttttgcaggcgtagtggaatccttaatcctcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaagtgactatgagctacagggacctgaagacattgctgtaga +actcgtaccagtagtgatgggggggataggcttggttctaggtttcaccaaagaaaagattggcaaaatgct +atcatctgctgcgtccacgcttagagcgtgtaaagaccttggagcatacggattggaaattctaaaactggt +catgaaatggttcttcccgaagaaagatgaggcaaacgaacttgcaatggtgagatccattgaggacgcagt +gttggacctagaagcaattgaaaacaaccacatgacttctttgctcaaagacaaggacagcctggcaaccta +catgagaaccctagatcttgaagaggagaaggccaggagactctccacaaaatctgcctcacctgacatcgt +aggcacaatcaacgccctgctagcaaggatcgcggccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaagccaggaataggaaagacccaccttgctag +agaattggcaaagaagatcgcagccaccctcacaggagatcagagggtgggcctcgtcccacgtaacggcgt +cgaccactgggatgcatacaaaggtgaaagagttgtcctttgggatgactatgggatgagcaaccccattca +cgacgcccttaggctgcaagaacttgctgacacttgccccctaacactaaactgtgatagaattgagaacaa +gggaaaagtctttgacagtgatgctataattattacaactaatctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcaaggcgtattgacttcctcgtgtatgctgatgcccctgatgttgagaaggcaa +agcgcgacttcccagggcagcctgacatgtggaaggatgcctttagatctgacttctcacatataaagctga +tgttggctcctcagggtggttttgataagaacggcaacactccacatgggaagggtatcatgaaaaccctta +catctggctctctcattgctcgtgcgtcagggctcctccatgaaagactggacgaatacgagttgcaaggcc +caacacccacaacattcaacttcgaccagaataaggtttttgctttcaggcaactcgctgctgaaaataaat +acgggctgatggacactatgagagtgggaagtcagctcaagggtgtcaaaaccgtgtcagagctcaagcagg +cgctcaagaacatcgcaatcaaaagatgccagatagtctacggtggtctcacatactcacttgaatctgatg +gcaaaggcaatgtgaaggttgagagagtgcagagtacaactgtacaaaccaacaatgagctatctggcgctc +tacaccatctcaagtgcgccaggatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctttggt +ctaggccacaggtagaggatgcagaaga--------ggtcatcaatagagacgggtgtccaaaaccaaaa-- +-gat----gatgagg---agtttgtcatctcatctgaagacatcaaagctgagggcaagaaaggaaagaaca +agtccggtcgtggcaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaataca +aaagaattagggaagaaaggaatggtaagtactctatagaagaatacctccaggacagagacaagtat---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaagaagaggaagccaagatccgacaga +ggatttttagaccaacgaggaaacaacgtaaagaggagagggcttctcttggcctggtcacaggctcagaaa +tcagaaggaggaacccagatgacttcaaacccaagggaaaattgtgggctgatgacgacagaagtgtcgatt +acaacgaaagacttagttttgaagctcccccaagcatttggtcgagaatagtcaactttggttcaggttggg +gtttctgggtttcac-ctagtctgttcataacatccactcatgtcatacctcaaggatcacaggagttcttc +ggggtttccattaagcaaatccaaatccacaaatcgggtgagttctgccgcctaagattcccaaaaccaatc +agaactgatgtgacaggcatgatcttggaagaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggaactcatgccactggcagctaggatgggcacccatgcaaccatgaagatccagggtcgc +actgttgggggccagatgggaatgctcttgacaggatctaatgctaagagcatggatctgggcaccacacca +ggtgactgtgggtgtccctacatctacaaaagaggaaatgactacatagtcattggagtccacacggccgct +gctcgcggagggaatactgtcatctgtgcaacccagggaaacgagggtgaggccatacttgaaggtggtgat +aacaaaggcacctactgcggtgccccaatcctaggcccaggaagtgcccccaagctcagcaccaagaccaaa +ttctggaggtcctcaacagcaccactcccacctggaacatatgagccagcctaccttggaggtaaggacccc +agagttaaaggtggcccctcactacaacaagtaatgagagaccaattaaaaccattcacagagcccaggggc +aaaccaccaaacccgagtgtgctagaggctgccaaaaagaccatcatcaatgtcctcgaacagacaatagac +ccaccccaaaaatggtcgtttgcgcaagcttgcgcatctcttgataagaccacctctagtggccatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacagggaaattggcagaccaagcctcaaaagcc +aacctaatgtttgaggaagggaaaaacatgaccccagtctacacaggtgccctcaaggatgagctagttaaa +actgataaaatatatggtaaaattaagaagaggctcctctggggatcggatctggcaaccatgatccgttgt +gctcgagcattcggagggctaatggatgaactcaaggctcactgtgtcacactccctattagagttggaatg +aacatgaatgaggatggccctattatctttgagaaacactctagatacaaataccattatgatgcagactac +t-ctcggtgggattcaacacagcagagagctgtactggctgcagccctagaaatcatgg-tcaaattttctt +cagaaccacacct-agcccagatagtcgcagaagaccttctgtctcccagtgtgatggacgtgggcgacttc +aaaatatcaatcactgaaggactcccttctggggtgccttgcacctcacaatggaattctattgcccattgg +ctcctcacactctgtgcactctccgaggtgacaaacttatcccctgatattatccaagccaattctcttttc +tctttctatggtgatgatgaaattgtgagtacagatattaaattggatccagaaaaactgacagctaaactg +aaagagtatgggctaaaaccaacacgccctgataagactgaagggcctctggtcatctctgaggacctgaat +ggtctgaccttcctgcggaggactgtgacccgcgatccagctggttggtttggaaaattggaacagagttca +atacttagacaaatgtattggaccaggggtccaaatcatgaggacccctctgaaacaatgataccacattcc +cagagacctatacagctaatgtccctgctaggtgaagctgcactgcatggcccatcattctacagcaagatc +agcaagctagtcattgcagagttgaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttt +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcaggtgcagcaatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaattttccaattgacaatctgagcgcagcacagattacaatgtgcccgcatgt +gatcgtggatgtcaggcaattggaaccaatcaaccttccgatgcctgatgtccgtaataatttctttcatta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgttatacacacctcttagggcaaataattc +aggagatgatgttttcactgtgtcttgtagagtattaactaggcctagccctgatttctcattcaattttct +tgttccacccactgtggaatcaaagacaaagcctttcaccctccccattttgactatctctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctgcacaccagcccgactgagaatattgttgtccagtgcca +aaatgggcgcgtcacccttgacggtgagttaatgggcaccacccaactcttgccgagtcaaatatgtgctct +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaagccgacacggcaacccctaggctgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaaccccctacgaccctgcagaagacataccagc +ccctttgggaacaccagacttccggggcaaggtctttggcgtagctagccaga---gaaa------------ +-----cc------------ctgacagcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcgccccgaaattgggttccctagaaatatcc------------actgaatc +cagtgactt---tgactcaaatcaaccaacaa---------------------------ggttcaccccag- +--------ttggcattggggttgacaa------------tgaggcagattttcagcaatggtccttacctga +ctactccggtcag-ttcact------cataacatgaacttagccccagctgtcgcccccaatttccctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcgg-----tcta---------- +--acgggattctagactgcctggttccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtggccctggttaggtatgttaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggcttcatgactatagctaagaatggtgactctccaataactgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaattcagg---ggctagtgccatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcttttgctcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttctcccccactgatgcagcccgtggggcaattaatgcccccatgacaaaagttttggattggagtgga +acgaggtactgggcaccaaacgccacctccacaacctcaatgtcaggtggcttcaca-agcca--------- +aa-------------ctgtgcacagaaccgcaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaagtccacacccagcagtgggtcttcagtgaggtca +aattcaacccaactcac--tagcttgagctcacactcctccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cggttgtcagctcattgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacaaccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-a--------at-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY442320.1/1-7527 |Norovirus GII.3 strain Hu/US/1972/GII.Pg_GII.3/ShippensburgC2, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------accagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaactagtat +ggctgtcacttttaaacggg----ccctcggggcccggcctaaacagccg-tccccgagggaaacaacacaa +aaacaaaa---------------gcccccacgaccgcccactccggagttggtc-------aaaaagatccc +gcc-----------------------------tcccccaccaaacgg------ggaggacgaactagtggtc +tcctatagtg----------ttaa---agacggcgtctccggtttgcccgaactttctaccgtcagtcagcc +gaacgaggccaacacagcattcagtgtccccccactcaatcagagggagaacagggacgctaaagagccact +aactggcaccattctggaaatgtgggacggggagatctaccattatggcctgtacgtggaacggggcctggt +gctcggagtacacaaaccaccagcggctatcagtcttgccaaggttgagttgacaccactgtctctatactg +gagaccagtgtacacccccc---agtaccttatagctccagacactctcagaaagctacatggagagtcatt +tccttacacggcctttgacaacaactgttatgccttctgttgctgggtcctagacctgaacgactcttggct +tag---caggagaatgatacagagaacaactggctttttcaggccctaccaggactggaacagaaagcccct +ccctaccatggatgactccaaattgaaaaagatggccaatataatcctgtgtgctttgtcatcactgttcac +caggcccatcaaggatataattggaaaattaagacctttaaacatccttaacatattggcttcctgcgattg +gacttttgcaggcgtagtggaatccttaatcctcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaagtgactatgagctacagggacctgaagacattgctgtaga +actcgtaccagtagtgatgggggggataggcttggttctaggtttcaccaaagaaaagattggcaaaatgct +atcatctgctgcgtccacgcttagagcgtgtaaagaccttggagcatacggattggaaattctaaaactggt +catgaaatggttcttcccgaagaaagatgaggcaaacgaacttgcaatggtgagatccattgaggacgcagt +gttggacctagaagcaattgaaaacaaccacatgacttctttgctcaaagacaaggacagcctggcaaccta +catgagaaccctagatcttgaagaggagaaggccaggagactctccacaaaatctgcctcacctgacatcgt +aggcacaatcaacgccctgctagcaaggatcgcggccgctcgttccctggtgcatcgggcaaaagaggagct +ttctagcagaccaaggcccgttgttgtgatgatatcaggtaagccaggaataggaaagacccaccttgctag +agaattggcaaagaagatcgcagccaccctcacaggagatcagagggtgggcctcgtcccacgtaacggcgt +cgaccactgggatgcatacaaaggtgaaagagttgtcctttgggatgactatgggatgagcaaccccattca +cgacgcccttaggctgcaagaacttgctgacacttgccccctaacactaaactgtgatagaattgagaacaa +gggaaaagtctttgacagtgatgctataattattacaactaatctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcaaggcgtattgacttcctcgtgtatgctgatgcccctgatgttgagaaggcaa +agcgcgacttcccagggcagcctgacatgtggaaggatgcctttagatctgacttctcacatataaagctga +tgttggctcctcagggtggttttgataagaacggcaacactccacatgggaagggtatcatgaaaaccctta +catctggctctctcattgctcgtgcgtcagggctcctccatgaaagactggacgaatacgagttgcaaggcc +caacacccacaacattcaacttcgaccagaataaggtttttgctttcaggcaactcgctgctgaaaataaat +acgggctgatggacactatgagagtgggaagtcagctcaagggtgtcaaaaccgtgtcagagctcaagcagg +cgctcaagaacatcgcaatcaaaagatgccagatagtctacggtggtctcacatactcacttgaatctgatg +gcaaaggcaatgtgaaggttgagagagtgcagagtacaactgtacaaaccaacaatgagctatctggcgctc +tacaccatctcaagtgcgccaggatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctttggt +ctaggccacaggtagaggatgcagaaga--------ggtcatcaatagagacgggtgtccaaaaccaaaa-- +-gat----gatgagg---agtttgtcatctcatctgaagacatcaaagctgagggcaagaaaggaaagaaca +agtccggtcgtggcaagaaacacacagccttctcaagcaagggtctcagtgatgaggagtacgatgaataca +aaagaattagggaagaaaggaatggtaagtactctatagaagaatacctccaggacagagacaagtat---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaagaagaggaagccaagatccgacaga +ggatttttagaccaacgaggaaacaacgtaaagaggagagggcttctcttggcctggtcacaggctcagaaa +tcagaaggaggaacccagatgacttcaaacccaagggaaaattgtgggctgatgacgacagaagtgtcgatt +acaacgaaagacttagttttgaagctcccccaagcatttggtcgagaatagtcaactttggttcaggttggg +gtttctgggtttcac-ctagtctgttcataacatccactcatgtcatacctcaaggatcacaggagttcttc +ggggtttccattaagcaaatccaaatccacaaatcgggtgagttctgccgcctaagattcccaaaaccaatc +agaactgatgtgacaggcatgatcttggaagaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggaactcatgccactggcagctaggatgggcacccatgcaaccatgaagatccagggtcgc +actgttgggggccagatgggaatgctcttgacaggatctaatgctaagagcatggatctgggcaccacacca +ggtgactgtgggtgtccctacatctacaaaagaggaaatgactacatagtcattggagtccacacggccgct +gctcgcggagggaatactgtcatctgtgcaacccagggaaacgagggtgaggccatacttgaaggtggtgat +aacaaaggcacctactgcggtgccccaatcctaggcccaggaagtgcccccaagctcagcaccaagaccaaa +ttctggaggtcctcaacagcaccactcccacctggaacatatgagccagcctaccttggaggtaaggacccc +agagttaaaggtggcccctcactacaacaagtaatgagagaccaattaaaaccattcacagagcccaggggc +aaaccaccaaacccgagtgtgctagaggctgccaaaaagaccatcatcaatgtcctcgaacagacaatagac +ccaccccaaaaatggtcgtttgcgcaagcttgcgcatctcttgataagaccacctctagtggccatccgcac +cacatgcggaagaatgaatgctggaacggagagtccttcacagggaaattggcagaccaagcctcaaaagcc +aacctaatgtttgaggaagggaaaaacatgaccccagtctacacaggtgccctcaaggatgagctagttaaa +actgataaaatatatggtaaaattaagaagaggctcctctggggatcggatctggcaaccatgatccgttgt +gctcgagcattcggagggctaatggatgaactcaaggctcactgtgtcacactccctattagagttggaatg +aacatgaatgaggatggccctattatctttgagaaacactctagatacaaataccattatgatgcagactac +t-ctcggtgggattcaacacagcagagagctgtactggctgcagccctagaaatcatgg-tcaaattttctt +cagaaccacacct-agcccagatagtcgcagaagaccttctgtctcccagtgtgatggacgtgggcgacttc +aaaatatcaatcactgaaggactcccttctggggtgccttgcacctcacaatggaattctattgcccattgg +ctcctcacactctgtgcactctccgaggtgacaaacttatcccctgatattatccaagccaattctcttttc +tctttctatggtgatgatgaaattgtgagtacagatattaaattggatccagaaaaactgacagctaaactg +aaagagtatgggctaaaaccaacacgccctgataagactgaagggcctctggtcatctctgaggacctgaat +ggtctgaccttcctgcggaggactgtgacccgcgatccagctggttggtttggaaaattggaacagagttca +atacttagacaaatgtattggaccaggggtccaaatcatgaggacccctctgaaacaatgataccacattcc +cagagacctatacagctaatgtccctgctaggtgaagctgcactgcatggcccatcattctacagcaagatc +agcaagctagtcattgcagagttgaaggaaggtggcatggatttttacgtgcctagacaagagccaatgttt +cggtggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcaggtgcagcaatagcagcacccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcagctaggaactcccctgg +tgaagtacttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaatgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaattttccaattgacaatctgagcgcagcacagattacaatgtgcccgcatgt +gatcgtggatgtcaggcaattggaaccaatcaaccttccgatgcctgatgtccgtaataatttctttcatta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgttatacacacctcttagggcaaataattc +aggagatgatgttttcactgtgtcttgtagagtattaactaggcctagccctgatttctcattcaattttct +tgttccacccactgtggaatcaaagacaaagcctttcaccctccccattttgactatctctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctgcacaccagcccgactgagaatattgttgtccagtgcca +aaatgggcgcgtcacccttgacggtgagttaatgggcaccacccaactcttgccgagtcaaatatgtgctct +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaagccgacacggcaacccctaggctgttca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatggaaccccctacgaccctgcagaagacataccagc +ccctttgggaacaccagacttccggggcaaggtctttggcgtagctagccaga---gaaa------------ +-----cc------------ctgacagcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcgccccgaaattgggttccctagaaatatcc------------actgaatc +cagtgactt---tgactcaaatcaaccaacaa---------------------------ggttcaccccag- +--------ttggcattggggttgacaa------------tgaggcagattttcagcaatggtccttacctga +ctactccggtcag-ttcact------cataacatgaacttagccccagctgtcgcccccaatttccctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcgg-----tcta---------- +--acgggattctagactgcctggttccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtggccctggttaggtatgttaaccctgacactggtagagtgctatttgaggccaagctacacaa +attgggcttcatgactatagctaagaatggtgactctccaataactgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaattcagg---ggctagtgccatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcttttgctcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttctcccccactgatgcagcccgtggggcaattaatgcccccatgacaaaagttttggattggagtgga +acgaggtactgggcaccaaacgccacctccacaacctcaatgtcaggtggcttcaca-agcca--------- +aa-------------ctgtgcacagaaccgcaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaagtccacacccagcagtgggtcttcagtgaggtca +aattcaacccaactcac--tagcttgagctcacactcctccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cggttgtcagctcattgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatctcaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacaaccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-a--------at-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KX752057.1/1-6952 |Norovirus GII/Hu/China/2009/GII.P7-GII.6/Beijing non-structure protein and VP1 genes, complete cds; and VP2 gene, partial cds +--------atgaagat---ggcgtctaat-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtgcattctccaacat +caaagttggaattaagaaaa----tgctgggtgccgtacctaagggtact-------------aaagcaccc +aacagtga----------------ccagcactgtccaacagtcaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaggac------accgta +cagtttgatg----------cgaggtctgaaaccgtaactgggctaccggacttgacaacagt---acaaaa +tgaacacgaaaacaccccatacaccgtccctccactgagtgagagggaacacagaccagccactgagccgct +tcctggcacaatattggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaggc +tctgggggtccacaaacccccggcagctataagcctcgcgacgatagaactcacccccatatctctatactg +gagacccgtttacaccccca---actacctggtctgcccagacacgctgaaaggtctcgctggtgaaaagtt +cccctacacggctttcagcaacaactgctacaatttctgttgctgggtgcttgagctcaatgacacgtggct +cag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggctcgctgttttc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttgctacacctgctcgcgtcgtgtgattg +gacgtttgcgggtatagtggagacagtcatcttaatggcggaacttttc---aacgtcttttggaccccgcc +agatgtctctaatttcatagcctccctggtaagtgattttgaattgcagggacctgaggacttggcagtgga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgaaaggataggtcgtatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacttagggaactatgcccttgacatactaaaattggt +catgaagtggttcttcccaaagaaagaggagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +cctagatatggaggctataggtaacaaccatctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaaaaccctggatctagaagaagagaaggcaaggaagctatccaccaagtcatcctcgccggacatcgt +cggcaccatcaatgccatactggctagaatagctgccgctagatctctcctgcacaaggccaaagaagagat +gttcggcaggatcagaccagtggttgtcatgatctcaggcagacctggcgttggcaaaacccatatggcaag +gcatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtagtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagaattggctgacacatgtccagtcactctaaattgtgataggatcgagaacaa +ggggaaaatgttcgacagtgatgtcatcataatcacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggtcaacctgacatgtggaaggactatttcaaacaagacttttcccacataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggtaccatgcgatccctca +cccaggggtccctgaccgcgagggttgcaggccttgttcatgagaggaaggatgagttccagctacaaggga +acgacctccagacatataactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaagaatgtcaagactttggaagatctgaaaatcg +ccttgagagatgtaaagttcaatgagtgtgaaataatctacaggaactctaggtatcgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcatacatctcagactgcaaatgaagtgggatcagcac +tcctcagacttagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgtcgtta---------------acagga------tctccaaaaggttctgct +gggagaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtgtctcaaggca---ggtgggagattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggtaagaaacacacagctttctccagcaaaggcctgagtgatgaagagtatgatgagttca +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccggggccgttac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaggaagaagccaagataagacaga +gaatcttccgcccaacaaggaagcaaagaaaggaggaaaggggggtgcttggcttagtcactggctcagata +tcaggaagaggagaccagacgattttcaaccaaaaggtaacctatgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccactgggtactggttggg +gcttctgggtttcat-ctaatctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggttgaagtcaaacaaatccaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgttacagggctcgtgttggaggaaggtgctccagaaggcactgtctgttctatactcgtgaag +agacccacaggtgagatgatccccctagcagtgaggatgggcacgcacgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcgaacgcaaagaacatgggtcttggcaccggtcct +ggtgactgcggttgcccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatctgtgcaactcaagggcaagatggggaggcagtccttgaaggaaatgaa +aaccttggcacttactgtggtgccccaattttgggccctggtaaagcgcccaaactcagcacaaaaaccaaa +ttttggcgctcatcaccagatgccctacctcctggtacatacgaacctgcttacctggggggtagggatccc +agagtggaaaaagggccctccctacagcaagtcatgagagaccagctgaaacccttcacagagcccaggggc +aaaccacctagaccagcagttttagaagaagctaaaaagacagtgatgaatgttctagaacagaccattgac +cctgctaagccatggacctactcacaagcatgtgcttcactggacaagaccacctctagtggcagcccccac +catgtcaagaaaaatgaccactggaatggggagtcttttactggtccccttgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaagataaagaagaggcttctatgggggtcagaccttggtacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgcatagctcttccatgtagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtatcactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgctatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacgtcacaatggaattcgatagcgcactgg +attctaactctgagcgcaatggcagaagtttcaggtctttcaccagacgttgtccaagcccactcctgtttt +tcattttatggcgacgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggccccctcgtcataactgaagacctcacc +ggcctgacattcctgcgtagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +attctcagacaattatactggacaagggggcccaatcatgagaatccgtacgagagcatggttccccactct +cagcgagctacccagctcatggcccttcttggcgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtagtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgaaatgcttctaaatcttgaattgggcccagaacttaacccttacttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgccgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcccctccctgatataaggaataggttcttccatta +caaccaggaaaacacc---cctcggatgagactcgtggccatgctctacacgcctctaagggc---taattc +tggtgaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagttcacattttt +agttccaccaactgttgaatcaaaaacaaagccctttactctacctatcctaactcttggtgagttgtctaa +ctcccgt---tttccggctgctatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtaggtgcactcttgatggcacattgcaaggcacaacacaattggtcccaacacagatttgtgcctt +taggg-----------------------------------------gcaccctgatcagccag--------- +----------actgcgagagcg------gt----------------------------cgattcaacag--- +--actccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttacacgtccaggtgaagaacctagatggcacacagtatgacccaacagatgatattcctgc +ggtcctgggggctattgacttcaaaggtacagtgtttggagtggctagtcaga---gggatgtctctggaac +-----ac---aagaacagggccattatgccacc--------cga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattaggcacaattcttat---ca---------aatctgaatc +tcctgattt---caacacaaatcaacccatta---------------------------ggttcactccag- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtaga-ttgact------ttaaatatgaaccttgcccccgctgtttccccatcttttcctggtg +aacgaatcctcttcttcaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggagtgggtgcaacacttctaccaggaagcagcaccttcaca +atctgctgttgcactggtcaggtatgttaaccccgacactgggcgtaacatttttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtagttccccctaatggttattttagatt +tgaggcttgggttaaccaattttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggcgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgacaaagagatgttacaa +tcacaggttttggcaaccaaacaactgcagcaggaaatgatgaacataaggcaaggggtgttga-------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY392867.1/1-7397 |Norovirus GII.17 isolate Hu/GII.17/LVCA_24606/2015/BRA RdRp gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +---------------cgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaacatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattgggctggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaactttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacacaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggaaaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctctacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacctactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttaactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagtccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgcgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgttgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctgatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggcgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgcctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctct------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY392868.1/1-7319 |Norovirus GII.17 isolate Hu/GII.17/LVCA_24785/2015/BRA RdRp gene, partial cds; VP1 gene, complete cds; and VP2 gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-----------ttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggttgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggacgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaacatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagttagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagcgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtatggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacacaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagctttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggaaaggaatggtaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgctcctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gcccgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaacgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacctactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctctctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaacggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgcgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------gatggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggagag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgcctagcccaaat---------------------------------g +ctt-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------atctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcagtctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcg------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KY486271.1/1-7551 |Norovirus GII strain Hu/GII.Pe-GII.4-Sydney/2013/USA, complete genome +--------------at---ggcgtctaac-gacgcttccgttgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggtt +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagacctcggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagtaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgtcactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaacctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccgacaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaacaggagagctcatgcctttggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggttgcccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaggcttgcgcatctcttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgt +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttacagcaaaatt +agcaaattagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcacaacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagcccccgcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtgggaatttgtcacctttcatga---ggggggcccacaacatatcttttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>KY424328.1/1-7529 |Norovirus GII.4 isolate Hu/GII.4/RockvilleD1/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcactttcaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctagaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggttacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaagggggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaaattatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaatcgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactggaaatcatgg-ttaagttctctc +cggaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactctcttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttactgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaactt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +cgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcatggttcctcc------------------ag +caaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-ttttctt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424329.1/1-7529 |Norovirus GII.4 isolate Hu/GII.4/RockvilleD7/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcactttcaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctagaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggttacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaagggggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaaattatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaatcgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactggaaatcatgg-ttaagttctctc +cggaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactctcttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttactgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaactt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +cgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcatggttcctcc------------------ag +caaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-ttttctt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424330.1/1-7529 |Norovirus GII.4 isolate Hu/GII.4/RockvilleD14/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcactttcaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctagaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggttacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaagggggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaaattatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaatcgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactggaaatcatgg-ttaagttctctc +cggaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactctcttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttactgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaactt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-artact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +cgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcatggttcctcc------------------ag +caaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-ttttctt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424331.1/1-7529 |Norovirus GII.4 isolate Hu/GII.4/RockvilleD21/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcactttcaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaggccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctagaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactat +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgtaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccaaatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaaggactcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggttacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgatt +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattttgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaagggggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaaattatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaatcgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagctggtaaag +accgataaagtttatggtaagatcaagaagagacttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactggaaatcatgg-ttaagttctctc +cggaaccacacct-ggcccagatagttgcagaagacctyctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactctcttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttactgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagycaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaargttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaactt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ycacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-artact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgacgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +cgattcctgggtcaaccaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tatratggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagtcaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggacwacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcatggttcctcc------------------ag +caaatctt-----------ctaac------------ttttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc----------t-ttttctt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424332.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD104-2/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccgtcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatagctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgctacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgccacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagttgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424333.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD104-5/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccgtcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatagctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgccacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagttgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424334.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD104-7/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccgtcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatagctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgccacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagttgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424335.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD104-8/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccgtcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggaraatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatagctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgccacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagttgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424336.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD104-9/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcttatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccgtcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatagctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgccacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagttgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaacttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424337.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD143-4/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcaagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgcttttagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcctccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaatgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caaccaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcgggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcggctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424338.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD143-7/1987/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcaagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgcttttagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccctcattgcaacaagttatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcctccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaatgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caaccaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcgggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcggctccagcaca +atccgatgtggctctactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgaccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424339.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD04-1A/1988/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctatcccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaagcccct +ccctactgtggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaagctaagacctcttaacatcctcaacatcttagcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttgctaggtgattatgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctagaaatcctaaaattagt +catgaagtggttctttccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +actggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcgtgatgatttcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaagcaag +cactcaagaatatcttaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtaagagttgacagagttcagagcgccaccgtgcagaccaataacgagctggctggcgccc +tacaccacctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactacgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgccccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttgcacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggactcaacacaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aagatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccttactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtctcctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caaccaatcacatgat---tctacccttaagttgatagcaatgttgtacacaccactcagggctaataatgc +cggggatgatgtcttcacagtctcttgtcgagttctcactaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaacctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +tcccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaatacga---------------------------aattcaccccag- +--------ttggcgtcatccaagacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgaggtttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttatttcagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatttgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctagggttac------------------------------ +------------------------------cttccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgc-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcatttgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-g-t-tgat-----tw-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424340.1/1-7521 |Norovirus GII.4 isolate Hu/GII.4/MD04-7A/1988/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctatcccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctctccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaagcccct +ccctactgtggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaagctaagacctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcaatgattgcccccttgctaggtgattatgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctagaaatcctaaaattagt +catgaagtggttctttccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +actggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcgtgatgatttcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaagcaag +cactcaagaatatcttaatcaagaggtgccagatagtgtacagtggttgcacctatacgcttgagtctgatg +gcaagggcaatgtaagagttgacagagttcagagcgccaccgtgcagaccaataacgagctggctggcgccc +tacaccacctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaattttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactacgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgccccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttgcacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggactcaacacaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aagatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccttactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtctcctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caaccaatcacatgat---tctacccttaagttgatagcaatgttgtacacaccactcagggctaataatgc +cggggatgatgtcttcacagtctcttgtcgagttctcactaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaacctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +tcccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaatacga---------------------------aattcaccccag- +--------ttggcgtcatccaagacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgaggtttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttatttcagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatttgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctagggttac------------------------------ +------------------------------cttccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgc-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcatttgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-g-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KY424341.1/1-7509 |Norovirus GII.6 isolate Hu/GII.6/BethesdaD1/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcatcaacaccgccccttc---taaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagtcaagatcggggccaagacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaaccgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaggc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcctgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctctctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcacttgacatattgaaactggt +tatgaagtggttctttccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaagatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaaactgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtctctcttgcacaaggctaaagaagagat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccggcgcccctcgattatgt +aaacttcgaggcttg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttctcccacataaaattga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttctaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttaggctcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgggtgaatccga-----aaagg +aagtgacccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgttac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggaaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcgcagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaggggaatgag +aaccttggcacctactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgccaagccgtggacctattcccaagcgtgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcacagacatcaaccttgatcccatgaagttgacacagaaactt +agagagtatggcttggtccccactcgacctgacaaaactgagggtcccctcgcaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagggttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaagtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccctatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaaccaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaatcttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ct------------------------------------------------ +------------------------------------------------------------------------ +- +>KY424342.1/1-7509 |Norovirus GII.6 isolate Hu/GII.6/BethesdaD7/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcatcaacaccgccccttc---taaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagtcaagatcggggccaagacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaaccgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaggc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcctgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctctctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcacttgacatattgaaactggt +tatgaagtggttctttccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaagatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaaactgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtctctcttgcacaaggctaaagaagagat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccggcgcccctcgattatgt +aaacttcgaggcttg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttctcccacataaaattga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttctaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttaggctcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgggtgaatccga-----aaagg +aagtgacccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgttac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggaaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcgcagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaggggaatgag +aaccttggcacctactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgccaagccgtggacctattcccaagcgtgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcacagacatcaaccttgatcccatgaagttgacacagaaactt +agagagtatggcttggtccccactcgacctgacaaaactgagggtcccctcgcaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagggttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaagtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccctatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaaccaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaatcttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ct------------------------------------------------ +------------------------------------------------------------------------ +- +>KY424343.1/1-7509 |Norovirus GII.6 isolate Hu/GII.6/BethesdaD14/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcatcaacaccgccccttc---taaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagtcaagatcggggccaagacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaaccgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaggc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcctgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctctctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcacttgacatattgaaactggt +tatgaagtggttctttccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaagatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaaactgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtctctcttgcacaaggctaaagaagagat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccggcgcccctcgattatgt +aaacttcgaggcttg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttctcccacataaaattga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttctaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttaggctcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgggtgaatccga-----aaagg +aagtgacccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgttac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggaaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcgcagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaggggaatgag +aaccttggcacctactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgccaagccgtggacctattcccaagcgtgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcacagacatcaaccttgatcccatgaagttgacacagaaactt +agagagtatggcttggtccccactcgacctgacaaaactgagggtcccctcgcaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagggttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaagtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccctatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaaccaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaatcttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ct------------------------------------------------ +------------------------------------------------------------------------ +- +>KY424344.1/1-7509 |Norovirus GII.6 isolate Hu/GII.6/BethesdaD21/2012/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agcatcaacaccgccccttc---taaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagtcaagatcggggccaagacattaatagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaaccgtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaggc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcctgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctctctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcacttgacatattgaaactggt +tatgaagtggttctttccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaagatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaaactgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtctctcttgcacaaggctaaagaagagat +gtttagcaggaccagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaaaatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccggcgcccctcgattatgt +aaacttcgaggcttg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttctcccacataaaattga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttctaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttaggctcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgggtgaatccga-----aaagg +aagtgacccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgttac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggaaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaattcataagtctggagagttctgcaggttcagattcccgagaccaatt +agaccagatgtcgcagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaacgcgaagaacatggaccttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgaggggaatgag +aaccttggcacctactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccaccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgccaagccgtggacctattcccaagcgtgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagttaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgagccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcacagacatcaaccttgatcccatgaagttgacacagaaactt +agagagtatggcttggtccccactcgacctgacaaaactgagggtcccctcgcaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaaattagaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaatcgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagttcactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaatattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtaagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaacacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagggttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccaatagacatgttgtacactgaccccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaagtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccctatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaaccaattctatacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaatcttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------tct--------------atctaggactagtgattgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ct------------------------------------------------ +------------------------------------------------------------------------ +- +>KY424345.1/1-7521 |Norovirus GII.6 isolate Hu/GII.6/HenrytonH1/1971/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcccaaaagcacc-------------aaggcaccc +agcggtga----------------ccagcactgccccactgttaagattgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggac------gttgtg +cagtttgatg----------caaaatcggaaactgtacgtgggctacccgacctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacagtccctccactgagtgaaagggagcatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgaattctatcactactccatttatgtcagcggaggcaaagc +cctgggagtacacaaacccccagcagctataagcctcgcgacaatagaactcacccccatatccctttactg +gcggcctgtctacactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccttatacggccttcagtaacaactgctacaacttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggagaagtatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgctcgcgtcgtgtgactg +gacatttgcaggtatagtagagacggtcatcttaatggcggaactcttc---aacgtcttttggaccccgcc +agatgtctccaactttatagcctccctgataggtgattttgagctacaagggcctgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgctgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaaactagt +catgaagtggttcttcccaaagaaggaagagaaggccgagatggagaccttaagggcgatcgaggacgccgt +tttagacatggaggcaatagggaacaaccatctcacgacactcctcaaggataaggatagcctcactgcatt +catgaagactttagacctagaagaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggcaccattaatgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggcaggcctggcattggtaaaacccatatggcgag +gcatctggctaagaatatagccaacaccatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggagagagggtagtcctatgggacgactacggtatggggaaccctgtcaa +agatgccttaacattacaagagctggccgacacctgcccagttaccctgaattgtgataggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattatgt +aaacttcgaggcttg-ctccagaagaatcgatttcctcgtttatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaaactga +ctttagccccccagggcgggtttgataagaatggtaacaccccacatggtaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggacttgttcatgagaggagagatgagttccagctgcaagggg +acaacctacaaacatacaactttgacaccaacagggtctctgcgtttaggaaactggccgcagataataagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaactccaagtaccgagtctcatccaatg +gcaaaggcacagtctctgttcacaaagtcgaggacctcacttctcaaaccgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcgagggccagatactacgtcagctgtttccaggaccttgtctacactctcatac +aggttgctggggcttcattcgtcgtca---------------acagga------tctctaagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------ccaggaggcgagtgagcccga-----aaagg +agactgcccagggtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaaggggcaagaagcacacagccttctccagtaaaggtctgagtgacgaagagtatgatgaattca +aaaggattagagaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatcttccgcccaacaaagaagcagagaaaagaggaaaggggggtgcttggcctggtcactggttcggaca +tcagaaagaggaggccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaatgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgtcctgcctaagggtattaaggaactcttt +ggagtcgatgtcaagcaaattcaaatccacaaatctggagaattttgcaggttcagattcccaaggccaatc +aggccagacgtctcagggctcgtgttagaagaaggtgcaccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatctatgaaaattcagggtagg +actgttggcggccaaatgggaatgcttctcacaggagcgaacgcaaagaacatggaccttggcaccggccca +ggcgattgcggttgtccatacatctacaaacgcggtaatgatataattgtggcaggtgttcacaccgcagca +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggatggagaagcagtccttgagggaaatgag +aatcttggtacgtactgcggtgccccaattttaggtcctggcaaggcgcccaagctaagcactaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctaggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagagaccaactgaaacccttcgcggaacccaggggt +aaaccaccaagacccgcagtcctagaagaggctaaaaagacagtgatgaacgtcctggaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgcgcctccttggataagaccacttccagtggtagtccccac +cacattaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagaccaagcttctaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcacttaaagatgagctcgtcaag +actgacaaaatctataaaaagataaagaagaggctcctttgggggtcagaccttggcacaatggttagatgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagggtgggaatg +aacatgaatgaggacggacccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactat +t-ctaggtgggattcaactcaacaaagaagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcacctagccaactagatgttggcgacttt +gtcatctctgttcaggaaggcttaccgtcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagacgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaattgacacagaaactc +agggagtatggtttggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggaccctgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgaaagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcacgggccccagttttacaagaaggtc +agcaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaactcgcctgg +tgagatgctcttaaaccttgagttgggcccagagcttaacccctatctaagtcatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccccgtagaaaatatcagtgcagcccagataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgacataaggaacagattcttccatta +caatcaggagaacacc---ccccggatgagacttgtagctatgctttacacacctctgagagc---caactc +tggtgaggatgtgtttactgtatcttgcagggttttgactcgtcctgctccagattttgagttcactttctt +ggtgccaccaactgttgaatcaaagactaagccttttacactgcctatattaactcttggtgaattgtccaa +ttctagg---ttcccagccccaatagatatgttatacactgacccaaatgaggggattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcagggtaccacacaattagtccccacccagatatgtgcttt +caggg-----------------------------------------gcacgctaattggccaa--------- +----------acctcaagatct------tc----------------------------agactcaactg--- +--attcagctccc--------cgaagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaatcttgatggcacgcagtatgacccaactgatgaggtgccagc +ggtccttggtgccattgatttcaagggggccgtctttggagtagccagccaga---gggatgtttcagggac +-----tc---aagtgggg---------gcaact--------cgt-----------gctcatgaagtgcacat +caacacaacagatcccaggtatacaccaaaactgggatccattctcat---gc---------actcggagtc +ggacgactt---tgtgactgggcagccaatcc---------------------------aattcacacccg- +--------tgggaatgggtgata---------------------acgactggcaccagtgggagttgcccga +ttactctggacac-ctaacc------ctgaatatgaatcttgccccagcagtcgcgcctgccttcccaggtg +agaggatccttttctttagatcaatagtcccat------ctgccggcggcta------tgggt--------- +--ctggacaaatagattgtctcataccacaggagtgggtccagcatttctatcaggaagctgcaccatccca +gtctgctgtggctctcatcaggtatgtcaaccctgacacgggcagaaacatctttgaggcaaaattgcacag +ggaaggcttcatcactgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +aaacc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctcttattaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataagcag--- +------------------------------cttcaaatggcatcatttaagcatgataaggagatgttgcaa +tcacaagtgttggcaaccaaacaattgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgtcaacgctccattgacaaagattctggactggaatggc +actagatattgggcaccaaatagtatgaaaaccacaagctactcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttctcagcacactgctct---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagctctccttctactatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctc-------cagg--------aa +ctgggtc----t---tccag-------------------gtccacctccacgt---------ccacagcaac +ctccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaaccacctttgtcacaccaccatcgagcag +ggcctca---tcaa------------------------------atggca---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-ttttctct---t---tccttt +t------------ctct-----cttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KY424346.1/1-7521 |Norovirus GII.6 isolate Hu/GII.6/HenrytonH2/1971/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcccaaaagcacc-------------aaggcaccc +agcggtga----------------ccagcactgccccactgttaagattgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggac------gttgtg +cagtttgatg----------caaaatcggaaactgtacgtgggctacccgacctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacagtccctccactgagtgaaagggagcatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgaattctatcactactccatttatgtcagcggaggcaaagc +cctgggagtacacaaacccccagcagctataagcctcgcgacaatagaactcacccccatatccctttactg +gcggcctgtctacactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccttatacggccttcagtaacaactgctacaacttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggagaagtatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgctcgcgtcgtgtgactg +gacatttgcaggtatagtagagacggtcatcttaatggcggaactcttc---aacatcttttggaccccgcc +agatgtctccaactttatagcctccctgataggtgattttgagctacaagggcctgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgctgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaaactagt +catgaagtggttcttcccaaagaaggaagagaaggccgagatggagaccttaagggcgatcgaggacgccgt +tttagacatggaggcaatagggaacaaccatctcacgacactcctcaaggataaggatagcctcactgcatt +catgaagactttagacctagaagaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggcaccattaatgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggcaggcctggcattggtaaaacccatatggcgag +gcatctggctaagaatatagccaacaccatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggagagagggtagtcctatgggacgactacggtatggggaaccctgtcaa +agatgccttaacattacaagagctggccgacacctgcccagttaccctgaattgtgataggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattatgt +aaacttcgaggcttg-ctccagaagaatcgatttcctcgtttatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaaactga +ctttagccccccagggcgggtttgataagaatggtaacaccccacatggtaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggacttgttcatgagaggagagatgagttccagctgcaagggg +acaacctacaaacatacaactttgacaccaacagggtctctgcgtttaggaaactggccgcagataataagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaactccaagtaccgagtctcatccaatg +gcaaaggcacagtctctgttcacaaagtcgaggacctcacttctcaaaccgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcgagggccagatactacgtcagctgtttccaggaccttgtctacactctcatac +aggttgctggggcttcattcgtcgtca---------------acagga------tctctaagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------ccaggaggcgagtgagcccga-----aaagg +agactgcccagggtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaaggggcaagaagcacacagccttctccagtaaaggtctgagtgacgaagagtatgatgaattca +aaaggattagagaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatcttccgcccaacaaagaagcagagaaaagaggaaaggggggtgcttggcctggtcactggttcggaca +tcagaaagaggaggccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaatgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgtcctgcctaagggtattaaggaactcttt +ggagtcgatgtcaagcaaattcaaatccacaaatctggagaattttgcaggttcagattcccaaggccaatc +aggccagacgtctcagggctcgtgttagaagaaggtgcaccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatctatgaaaattcagggtagg +actgttggcggccaaatgggaatgcttctcacaggagcgaacgcaaagaacatggaccttggcaccggccca +ggcgattgcggttgtccatacatctacaaacgcggtaatgatataattgtggcaggtgttcacaccgcagca +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggatggagaagcagtccttgagggaaatgag +aatcttggtacgtactgcggtgccccaattttaggtcctggcaaggcgcccaagctaagcactaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctaggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagagaccaactgaaacccttcgcggaacccaggggt +aaaccaccaagacccgcagtcctagaagaggctaaaaagacagtgatgaacgtcctggaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgcgcctccttggataagaccacttccagtggtagtccccac +cacattaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagaccaagcttctaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcacttaaagatgagctcgtcaag +actgacaaaatctataaaaagataaagaagaggctcctttgggggtcagaccttggcacaatggttagatgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagggtgggaatg +aacatgaatgaggacggacccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactat +t-ctaggtgggattcaactcaacaaagaagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcacctagccaactagatgttggcgacttt +gtcatctctgttcaggaaggcttaccgtcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagacgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaattgacacagaaactc +agggagtatggtttggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggaccctgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgaaagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcacgggccccagttttacaagaaggtc +agcaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtctaacgacgcttcyccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaactcgcctgg +tgagatgctcttaaaccttgagttgggcccagagcttaacccctatctaagtcatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccccgtagaaaatatcagtgcagcccagataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgacataaggaacagattcttccatta +caatcaggagaacacc---ccccggatgagacttgtagctatgctttacacacctctgagagc---caactc +tggtgaggatgtgtttactgtatcttgcagggttttgactcgtcctgctccagattttgagttcactttctt +ggtgccaccaactgttgaatcaaagactaagccttttacactgcctatattaactcttggtgaattgtccaa +ttctagg---ttcccagccccaatagatatgttatacactgacccaaatgaggggattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcagggtaccacacaattagtccccacccagatatgtgcttt +caggg-----------------------------------------gcacgctaattggccaa--------- +----------acctcaagatct------tc----------------------------agactcaactg--- +--attcagctccc--------cgaagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaatcttgatggcacgcagtatgacccaactgatgaggtgccagc +ggtccttggtgccattgatttcaagggggccgtctttggagtagccagccaga---gggatgtttcagggac +-----tc---aagtgggg---------gcaact--------cgt-----------gctcatgaagtgcacat +caacacaacagatcccaggtacacaccaaaactgggatccattctcat---gc---------actcggagtc +ggacgactt---tgtgactgggcagccaatcc---------------------------aattcacacccg- +--------tgggaatgggtgata---------------------acgactggcaccagtgggagttgcccga +ttactctggacac-ctaacc------ctgaatatgaatcttgccccagcagtcgcgcctgccttcccaggtg +agaggatccttttctttagatcaatagtcccat------ctgccggcggcta------tgggt--------- +--ctggacaaatagattgtctcataccacaggagtgggtccagcatttctatcaggaagctgcaccatccca +gtctgctgtggctctcatcaggtatgtcaaccctgacacgggcagaaacatctttgaggcaaaattgcacag +ggaaggcttcatcactgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +aaacc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctcttattaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataagcag--- +------------------------------cttcaaatggcatcatttaagcatgataaggagatgttgcaa +tcacaagtgttggcaaccaaacaattgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgtcaacgctccattgacaaagattctggactggaatggc +actagatattgggcaccaaatagtatgaaaaccacaagctactcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttctcagcacactgctct---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagctctccttctactatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctc-------cagg--------aa +ctgggtc----t---tccag-------------------gtccacctccacgt---------ccacagcaac +ctccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaaccacctttgtcacaccaccatcgagcag +ggcctca---tcaa------------------------------atggca---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-ctttctct---t---tccttt +t------------ctct-----cttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KY424347.1/1-7521 |Norovirus GII.6 isolate Hu/GII.6/HenrytonH3/1971/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcccaaaagcacc-------------aaggcaccc +agcggtga----------------ccagcactgccccactgttaagattgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggac------gttgtg +cagtttgatg----------caaaatcggaaactgtacgtgggctacccgacctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacagtccctccactgagtgaaagggagcatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgaattctatcactactccatttatgtcagcggaggcaaagc +cctgggagtacacaaacccccagcagctataagcctcgcgacaatagaactcacccccatatccctttactg +gcggcctgtctacactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccttatacggccttcagtaacaactgctacaacttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggagaagtatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgctcgcgtcgtgtgactg +gacatttgcaggtatagtagagacggtcatcttaatggcggaactcttc---aacatcttttggaccccgcc +agatgtctccaactttatagcctccctgataggtgattttgagctacaagggcctgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgctgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaaactagt +catgaagtggttcttcccaaagaaggaagagaaggccgagatggagaccttaagggcgatcgaggacgccgt +tttagacatggaggcaatagggaacaaccatctcacgacactcctcaaggataaggatagcctcactgcatt +catgaagactttagacctagaagaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggcaccattaatgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggcaggcctggcattggtaaaacccatatggcgag +gcatctggctaagaatatagccaacaccatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggagagagggtagtcctatgggacgactacggtatggggaaccctgtcaa +agatgccttaacattacaagagctggccgacacctgcccagttaccctgaattgtgataggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattatgt +aaacttcgaggcttg-ctccagaagaatcgatttcctcgtttatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaaactga +ctttagccccccagggcgggtttgataagaatggtaacaccccacatggtaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggacttgttcatgagaggagagatgagttccagctgcaagggg +acaacctacaaacatacaactttgacaccaacagggtctctgcgtttaggaaactggccgcagataataagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaactccaagtaccgagtctcatccaatg +gcaaaggcacagtctctgttcacaaagtcgaggacctcacttctcaaaccgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcgagggccagatactacgtcagctgtttccaggaccttgtctacactctcatac +aggttgctggggcttcattcgtcgtca---------------acagga------tctctaagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------ccaggaggcgagtgagcccga-----aaagg +agactgcccagggtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaaggggcaagaagcacacagccttctccagtaaaggtctgagtgacgaagagtatgatgaattca +aaaggattagagaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatcttccgcccaacaaagaagcagagaaaagaggaaaggggggtgcttggcctggtcactggttcggaca +tcagaaagaggaggccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaatgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgtcctgcctaagggtattaaggaactcttt +ggagtcgatgtcaagcaaattcaaatccacaaatctggagaattttgcaggttcagattcccaaggccaatc +aggccagacgtctcagggctcgtgttagaagaaggtgcaccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatctatgaaaattcagggtagg +actgttggcggccaaatgggaatgcttctcacaggagcgaacgcaaagaacatggaccttggcaccggccca +ggcgattgcggttgtccatacatctacaaacgcggtaatgatataattgtggcaggtgttcacaccgcagca +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggatggagaagcagtccttgagggaaatgag +aatcttggtacgtactgcggtgccccaattttaggtcctggcaaggcgcccaagctaagcactaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctaggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagagaccaactgaaacccttcgcggaacccaggggt +aaaccaccaagacccgcagtcctagaagaggctaaaaagacagtgatgaacgtcctggaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgcgcctccttggataagaccacttccagtggtagtccccac +cacattaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagaccaagcttctaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcacttaaagatgagctcgtcaag +actgacaaaatctataaaaagataaagaagaggctcctttgggggtcagaccttggcacaatggttagatgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagggtgggaatg +aacatgaatgaggacggacccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactat +t-ctaggtgggattcaactcaacaaagaagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcacctagccaactagatgttggcgacttt +gtcatctctgttcaggaaggcttaccgtcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagacgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaattgacacagaaactc +agggagtatggtttggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggaccctgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgaaagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcacgggccccagttttacaagaaggtc +agcaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtckaaygacgctkctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaactcgcctgg +tgagatgctcttaaaccttgagttgggcccagagcttaacccctatctaagtcatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccccgtagaaaatatcagtgcagcccagataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgacataaggaacagattcttccatta +caatcaggagaacacc---ccccggatgagacttgtagctatgctttacacacctctgagagc---caactc +tggtgaggatgtgtttactgtatcttgcagggttttgactcgtcctgctccagattttgagttcactttctt +ggtgccaccaactgttgaatcaaagactaagccttttacactgcctatattaactcttggtgaattgtccaa +ttctagg---ttcccagccccaatagatatgttatacactgacccaaatgaggggattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcagggtaccacacaattagtccccacccagatatgtgcttt +caggg-----------------------------------------gcacgctaattggccaa--------- +----------acctcaagatct------tc----------------------------agactcaactg--- +--attcagctccc--------cgaagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaatcttgatggcacgcagtatgacccaactgatgaggtgccagc +ggtccttggtgccattgatttcaagggggccgtctttggagtagccagccaga---gggatgtttcagggac +-----tc---aagtgggg---------gcaact--------cgt-----------gctcatgaagtgcacat +caacacaacagatcccaggtacacaccaaaactgggatccattctcat---gc---------actcggagtc +ggacgactt---tgtgactgggcagccaatcc---------------------------aattcacacccg- +--------tgggaatgggtgata---------------------acgactggcaccagtgggagttgcccga +ttactctggacac-ctaacc------ctgaatatgaatcttgccccagcagtcgcgcctgccttcccaggtg +agaggatccttttctttagatcaatagtcccat------ctgccggcggcta------tgggt--------- +--ctggacaaatagattgtctcataccacaggagtgggtccagcatttctatcaggaagctgcaccatccca +gtctgctgtggctctcatcaggtatgtcaaccctgacacgggcagaaacatctttgaggcaaaattgcacag +ggaaggcttcatcactgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +aaacc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctcttattaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataagcag--- +------------------------------cttcaaatggcatcatttaagcatgataaggagatgttgcaa +tcacaagtgttggcaaccaaacaattgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgtcaacgctccattgacaaagattctggactggaatggc +actagatattgggcaccaaatagtatgaaaaccacaagctactcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttctcagcacactgctct---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagctctccttctactatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctc-------cagg--------aa +ctgggtc----t---tccag-------------------gtccacctccacgt---------ccacagcaac +ctccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaaccacctttgtcacaccaccatcgagcag +ggcctca---tcaa------------------------------atggca---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-ctttctct---t---tccttt +t------------ctct-----cttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KY424348.1/1-7521 |Norovirus GII.6 isolate Hu/GII.6/HenrytonH4/1971/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------cctttggcagccaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcgttctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcccaaaagcacc-------------aaggcaccc +agcggtga----------------ccagcactgccccactgttaagattgggtctaaaacactagcgatccc +acc-----------------------------agagcccccaaacgg------tgaggac------gttgtg +cagtttgatg----------caaaatcggaaactgtacgtgggctacccgacctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacagtccctccactgagtgaaagggagcatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgaattctatcactactccatttatgtcagcggaggcaaagc +cctgggagtacacaaacccccagcagctataagcctcgcgacaatagaactcacccccatatccctttactg +gcggcctgtctacactccaa---actacctggtctgcccagacacattgaagggtcttgctggtgagaagtt +tccttatacggccttcagtaacaactgctacaacttctgttgttgggtgcttgagcttaatgacacgtggct +ttg---caggagaagtatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaatgcaattctctgtgcacttggctcactgttttc +aaaaccaatcaaagatctattgggcaaactcaagccactgaatctactacatctgctcgcgtcgtgtgactg +gacatttgcaggtatagtagagacggtcatcttaatggcggaactcttc---aacgtcttttggaccccgcc +agatgtctccaactttatagcctccctgataggtgattttgagctacaagggcctgaggacttagctgtgga +gcttgtccccgtggttatgggaggcataggaatggtcctcggtttcactgctgagaagattggccgcatgtt +gtcatctgccgcatcaactctacgggcatgcaaagatctggggaactacgccctcgacatactaaaactagt +catgaagtggttcttcccaaagaaggaagagaaggccgagatggagaccttaagggcgatcgaggacgccgt +tttagacatggaggcaatagggaacaaccatctcacgacactcctcaaggataaggatagcctcactgcatt +catgaagactttagacctagaagaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggcaccattaatgccatactggctagaatagcagctgctagatcccttctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggcaggcctggcattggtaaaacccatatggcgag +gcatctggctaagaatatagccaacaccatgagtggagaccagagagttgggcttgtcccgcgcaacggggt +tgaccattgggatgcctacaggggagagagggtagtcctatgggacgactacggtatggggaaccctgtcaa +agatgccttaacattacaagagctggccgacacctgcccagttaccctgaattgtgataggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattatgt +aaacttcgaggcttg-ctccagaagaatcgatttcctcgtttatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagcctgacatgtggaaagaccacttcaaaccggacttctcccacataaaactga +ctttagccccccagggcgggtttgataagaatggtaacaccccacatggtaagggcaccatgcggtccctga +cccaggggtccctgactgcaagagttgcaggacttgttcatgagaggagagatgagttccagctgcaagggg +acaacctacaaacatacaactttgacaccaacagggtctctgcgtttaggaaactggccgcagataataagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagactttggaagacctcaaagttg +ccttgagagatgtgaaattcaatgaatgtgagatcatctacaggaactccaagtaccgagtctcatccaatg +gcaaaggcacagtctctgttcacaaagtcgaggacctcacttctcaaaccgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcgagggccagatactacgtcagctgtttccaggaccttgtctacactctcatac +aggttgctggggcttcattcgtcgtca---------------acagga------tctctaagaggttctgct +gggaaaggtgggttaaaccaaccgagac-------------ccaggaggcgagtgagcccga-----aaagg +agactgcccagggtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaaaaaca +agaaaggaaggggcaagaagcacacagccttctccagtaaaggtctgagtgacgaagagtatgatgaattca +aaaggattagagaagaaagaaacggaaagtactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataaggcaaa +gaatcttccgcccaacaaagaagcagagaaaagaggaaaggggggtgcttggcctggtcactggttcggaca +tcagaaagaggaggccagatgacttccaaccaaagggcaatttatgggcagatgacactagaagtgtggact +acaatgagagacttgacttcgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gcttctgggtctcat-ccaacctcctgattacaacaacacatgtcctgcctaagggtattaaggaactcttt +ggagtcgatgtcaagcaaattcaaatccacaaatctggagaattttgcaggttcagattcccaaggccaatc +aggccagacgtctcagggctcgtgttagaagaaggtgcaccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatctatgaaaattcagggtagg +actgttggcggccaaatgggaatgcttctcacaggagcgaacgcaaagaacatggaccttggcaccggccca +ggcgattgcggttgtccatacatctacaaacgcggtaatgatataattgtggcaggtgttcacaccgcagca +gcccgaggaggcaacactgtcatctgtgccacccaagggcaggatggagaagcagtccttgagggaaatgag +aatcttggtacgtactgcggtgccccaattttaggtcctggcaaggcgcccaagctaagcactaagaccaaa +ttttggcgttcatcgccagatgccctgccacccggcacatatgaacctgcttacctaggaggcaaggacccc +agagtggagaaaggaccttccctgcagcaagtcatgagagaccaactgaaacccttcgcggaacccaggggt +aaaccaccaagacccgcagtcctagaagaggctaaaaagacagtgatgaacgtcctggaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgcgcctccttggataagaccacttccagtggtagtccccac +cacattaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagaccaagcttctaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcacttaaagatgagctcgtcaag +actgacaaaatctataaaaagataaagaagaggctcctttgggggtcagaccttggcacaatggttagatgt +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagggtgggaatg +aacatgaatgaggacggacccatcatctttgacaagcactccaaatacaggtaccattatgatgctgactat +t-ctaggtgggattcaactcaacaaagaagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaatt-ggcacaagtggttgcagaggaccttctggcacctagccaactagatgttggcgacttt +gtcatctctgttcaggaaggcttaccgtcaggggtcccatgcacgtcacaatggaattcaatagcacactgg +attttaactttgagtgcaatggcagaagtgtcaggcctctcgccagacgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaattgacacagaaactc +agggagtatggtttggtccccacccggcctgacaaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggaccctgctgggtggtttggaaagctggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgaaagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcacgggccccagttttacaagaaggtc +agcaagatggttatcagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtctaacgacgcttcyccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaactcgcctgg +tgagatgctcttaaaccttgagttgggcccagagcttaacccctatctaagtcatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccccgtagaaaatatcagtgcagcccagataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgacataaggaacagattcttccatta +caatcaggagaacacc---ccccggatgagacttgtagctatgctttacacacctctgagagc---caactc +tggtgaggatgtgtttactgtatcttgcagggttttgactcgtcctgctccagattttgagttcactttctt +ggtgccaccaactgttgaatcaaagactaagccttttacactgcctatattaactcttggtgaattgtccaa +ttctagg---ttcccagccccaatagatatgttatacactgacccaaatgaggggattgtagtccaaccaca +aaatggtaggtgcactcttgatggcactctgcagggtaccacacaattagtccccacccagatatgtgcttt +caggg-----------------------------------------gcacgctaattggccaa--------- +----------acctcaagatct------tc----------------------------agactcaactg--- +--attcagctccc--------cgaagaaggg----------------atcaccca----------------- +----------ctccacgtgcaattaaagaatcttgatggcacgcagtatgacccaactgatgaggtgccagc +ggtccttggtgccattgatttcaagggggccgtctttggagtagccagccaga---gggatgtttcagggac +-----tc---aagtgggg---------gcaact--------cgt-----------gctcatgaagtgcacat +caacacaacagatcccaggtatacaccaaaactgggatccattctcat---gc---------actcggagtc +ggacgactt---tgtgactgggcagccaatcc---------------------------aattcacacccg- +--------tgggaatgggtgata---------------------acgactggcaccagtgggagttgcccga +ttactctggacac-ctaacc------ctgaatatgaatcttgccccagcagtcgcgcctgccttcccaggtg +agaggatccttttctttagatcaatagtcccat------ctgccggcggcta------tgggt--------- +--ctggacaaatagattgtctcataccacaggagtgggtccagcatttctatcaggaagctgcaccatccca +gtctgctgtggctctcatcaggtatgtcaaccctgacacgggcagaaacatctttgaggcaaaattgcacag +ggaaggcttcatcactgtggcaaattctggtaacaaccccattgttgtcccccctaatgggtactttaggtt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +aaacc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctcttattaatgctgg---agctaatgcagttaatcagaaagttgaatatgattttaataagcag--- +------------------------------cttcaaatggcatcatttaagcatgataaggagatgttgcaa +tcacaagtgttggcaaccaaacaattgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgcggacgctgctagaggggccgtcaacgctccattgacaaagattctggactggaatggc +actagatattgggcaccaaatagtatgaaaaccacaagctactcagg-acagttctctagcagccctgttca +ta-----------agtcccctgctccttctcagcacactgctct---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtatatagctctccttctactatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctc-------cagg--------aa +ctgggtc----t---tccag-------------------gtccacctccacgt---------ccacagcaac +ctccac-------------------ctt--------------gtctaggaccagtgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaaccacctttgtcacaccaccatcgagcag +ggcctca---tcaa------------------------------atggca---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acctgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttcttt------tc-ttttctct---t---tccttt +t------------ctct-----cttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KY424349.1/1-7527 |Norovirus GII.17 isolate Hu/GII.17/GaithersburgD7/2014/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacagaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccactgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagcagcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattagagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagtgcctataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcagtgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacgatcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggtccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtggttagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccgctcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttctttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaatttccctggtg +aacaattgttattctttagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KY424350.1/1-7527 |Norovirus GII.17 isolate Hu/GII.17/GaithersburgD14/2014/US nonstructural polyprotein gene, partial cds; and major capsid protein VP1 and minor capsid protein VP2 genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacagaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccactgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagcagcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattagagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagtgcctataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagycagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcagtgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacgatcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggtccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtggttagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---aaccgcatgagattagtggctatgctctataccccgctcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttctttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaatttccctggtg +aacaattgttattctttagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KX158279.1/1-7542 |Norovirus GII strain 13-38, complete genome +--------------at---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +gactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgcccccttacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactatattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatt +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acgaggacagatggctcaaca--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggactggcatctgatgtccttggctccggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgacacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------ttttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ctcttt +a-g--------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>KX158280.1/1-7512 |Norovirus GII strain 13-39, complete genome +-------------------ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +gactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggagcgaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataataggaaagttgaaacctcttaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttagcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgcccccttacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcagagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactatattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagttgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatt +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtttacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acgaggacagatggctcaaca--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggactggcatctgatgtccttggctccggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgacacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------ttttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggtgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KX158281.1/1-7539 |Norovirus GII strain 14-55, complete genome +-------------------ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtggtga----------------tcagcactgcccctcagttaagattgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaacagtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggagcacagaccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaaaccatatcagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcatccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcatggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggattagacccgcggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtaggactcatcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatctagtcaacccggcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ccctagccccacagggtggatttgataagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccagggttccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgataccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaggatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagagccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacgaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcgcctccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaagggggttaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcaggttcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgctttgccgccaggcacttatgagcctgcctacttggggggtaaggacccc +agagtggaaaaaggaccatctctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaatcattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtatacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggcacaatgatcaggtgt +gccagggcttttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggtcccattatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atccttaccttgagtgcaatggcagaagtgtcgggtctctcgccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatagtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcagttgcacgggacccagctgggtggtttgggaaattggaccaggactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattttctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtgagacagcttgagccagtgcttttgcccctccctgatataaggaatagattctttcatta +taatcaggaaaacacc---cctcggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttacagtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagaactgtccaa +ctccaga---ttccccgctccgatagatatgttgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgcttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agataccacaaaccctagatataccccaaagcttggctctgtgttgat---gc---------attctgaatc +cactgattt---tgatgatggacagcctaccc---------------------------gctttaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattgcctga +gtattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgtctcatcccacaggagtgggttcagcatttctaccaggaggccgctccatcaca +gtctgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaattggacaggggcgcaga---------ag +ggttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaatcaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccccacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccactttaccc---cgttctgaccc---------------------------c +ccaa-------------------aagtcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttttgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgca---gc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gactaag-------------------------------- +------------------------------------cccttt------ac-actcccta---t---tctgac +t------------ctttgagaactttccaa------------------------------------------ +c---------tccagattccccgc------------------------------------------------ +- +>KP784691.1/1-7570 |Norovirus GII/Hu/ZAF/2009/GII.P4_GII.4/Johannesburg/4175, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcag---agatggtgtttccggtttgcctgatctttccaccgtcagacaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgcaaaggagccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---caggaggatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccactatggatgactccaaattaaagaaggtagctaatatattcttgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctattgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagtaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatagagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgttagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggcaatgtgaaagttgacagaatccaaagcgcctccgtgcaaaccaacaatgagctggctggcgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccgcgcgcatcgtcaagcgcatga------acatacaggacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgtcggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggccacacttgaaggtggtgac +aacaaggggacatactgcggtgcaccaatcctaggaccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattaactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatttctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctgctgggggaggctgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggtgagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaacccctacctttcccatttagccaggatgtacaa +tggctacgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggcttgagccccagccaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgctgatccccttacctgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggcaaacaatgc +tggagatgatgtctttacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------cccaca----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +tcctctgggaactccagatttcgtgggaaagatccaaggcgtactcacccaaa------------------- +-----cc-----acaaggggggatggctcgacc--------cgc-----------ggtcacaaggctacagt +gagcactggggacgcccacttcaccccaaagctgggcagtgttatgttctcca---------ctgatacaaa +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggacggtagcaccacccaccaaaatgaaccccaacaatgggttctcccaag +ctacttaggtaga-gacagt------cacaatgtgcatttagcccctgccgtggccccctctttcccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaacatggattgcctactcccccaagagtgggtgcagcacttctatcaagaggcagccccagcgca +atctgatgtggctctactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +atcaggttatgtcacagtggcccacactggccaacatgatttagttattccccccaatggttattttagatt +tgattcttgggtcaaccaattctacactcttgcccccatgggaaatggaacggggcgcaga---------cg +agcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgactttgaaaataatagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcttttcagcatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggagatgatgaaagttaaacaggcaatgctcctagagggc +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcaggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------agtccccgctcgtggctcctcc------------------ag +tatacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggaactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaaccggaatttgtcacctttcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatacgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttgaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KP784692.1/1-7569 |Norovirus GII/Hu/ZAF/2011/GII.P4_GII.4/Johannesburg/7028, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacggc +a------ac----aacgacaccgcaaaatcttcaagtgacc---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaatatcacaa +aag---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccgggttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactccatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggtctgtatgtggatcgaggccttgt +actgggtgtacacaaaccgccagctgccatcagcctcgctaggattgagctatcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacaccctcaagaagttacacggagaaacgtt +cccctgcacagcctttgacaacaattgttatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---taggaggatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgttattcac +caggcccataaaggatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcgtagtggaatccctgatactcttggcagagctcttt---ggagtgttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagggcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaggaaggaggaagcaaacgaactggctatagtgagatctatcgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcaggccaagaccagtggtaatgatgatatcgggcagaccaggaatagggaagacccacctcgctag +ggaagtggccaaaagaatcgcgtcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagtaaccctgttca +tgatgccctcaggttgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgagagcaa +aggaaaagtctttgatagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaagtcaa +agcgtgaattcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacatgaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggcaaaggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcaggactactccatgagaggttagatgaatttgaactacagggcc +caactctcaccaccttcaatttcgatcgcaataaagtacttgcctttagacaacttgctgctgagaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgacagaactcaaacaag +cactcaagaacatcgcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcgatgtgaaagttgacaaaattcagaacacctccgtgcagaccaacaatgagctgactggtgctc +tgcaccatctgaggagcgccagaatcagatactatgtcaagtgtgttcaggaggccctgtattccatcattc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ccaaaccacaagtggaagacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggattagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagggataaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagaggaggaagccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttcgctcggtctggtcacaggttctgaaa +ttaggagaagaaacccagatgatttcaaacccaaggggaagctgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcactacacca +ggtgattggggctgtccctacatctataagagaggcaatgactatgtagtcattggagtccacacagccgcc +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggctgtgcttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggaatgccccaacacttagcaccaagaccaaa +ttttggagatcgtccacggcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggacatttgcacaagcttgcgcgtcccttgagaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaaggaaaaaacatgaccccagtctatacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatagcaagatcaagaagaggcttctttggggttcggacttggcgactatggtccggtgt +gctcgagcattcggaggcttaatggatgaactcaaagcacattgtgtcacacttcccattagagttggtatg +aacatgaacgaggatggccccatcatcttcgagaaacattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctctc +cagaaccacactt-ggctcaggtagttgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacttgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgacgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctt +agggaatatggattgaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaggatttggac +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggacaaggggccccaaccatggagacccatctgaaacaatgattccacactct +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcccttgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaatgcgttcaccgc---cggaaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctaccacta +caatcaatcaaatgaa---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgttcacgggtcccagcagtgcctttgtcgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttactccaaaactgggtagagttcaatttgcca---------ctgatacaga +ccatgattt---tgatactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggttctactacccaccggaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aatact------cataatgtgcacctggcccccgctgtggcccccacttttccgggtg +aacagcttctcttctttagatccaccatgcccg------gatgtagtgggta------cccca--------- +--acatggatttggactgcctgctcccccaagaatgggtggcgcatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggcagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggagccatcaaccaaaaagttgaatttgataataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagatatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagaattaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggaa----------------gagctaatctcagggctgc------------------------------ +------------------------------tgtccccgctcggggtccctcc------------------ag +cacatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccatgaactgggttagggatca +aaataggagtttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagacaa-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>KP784693.1/1-7570 |Norovirus GII/Hu/ZAF/2011/GII.P4_GII.4/Empangeni/8501, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacggcaccgcgaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttgcctgacctctccaccgtcaggcaacc +ggaagaatccaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggcttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccctgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgagtttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgtaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaacgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtactccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaagacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaagcaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacgctactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggagacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggtatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgaaaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggtgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcggcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggccaattccctcttc +tctttctatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactctggagcgcgcccttgggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgacgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgagggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaga------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtgactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactattaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggggcggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaattttggactggagcgga +acaaggtactgggctcccgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +actttcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------t-------gt---gtctttcaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KP784694.1/1-7570 |Norovirus GII/Hu/ZAF/2012/GII.P4_GII.4/Empangeni/8604, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctaccgctgttgct------------aacagc +a------ac----aacgataccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtt-------aaaagcattcc +ccc-----------------------------ccctccgcccaacgg------agaggatgaaatagtggtt +tcctatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +tactggaacaattctcgaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtctcgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +caggcccataaaagacataatagggaagctaaagcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagagctcttt---ggaattttctggacgccccc +agatgtgtctgcgatgattgcacccttactcggtgactatgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatgggtggaattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatccgctgcatccaccttgagagcatgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaaaaaggaggaggcgaatgaactggctttagtgagatctatcgaggatgcagt +cttggatctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtaatgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccgcgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctttgggacgattatggaatgagcaaccccattca +cgatgccctcaggttgcaagagctcgctgacacttgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccacttgactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagatgcccctgacgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgacttctcacacatgaaactgg +cattggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaaaggcgtcatgaagactctca +ccacaggctcccttattgcccgggcatctgggttgctccatgagagattagatgaatttgaactacaaggcc +caacactcaccaccttcaattttgatcgcaacaaagtacttgcctttagacaacttgctgctgagaacaaat +atggattagtggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccagatagtgtatagtggttccacctacacacttgagtctgatg +gcaaaggtagtgtgaaagttgacagaatccagagcgcctccgtgcagaccaacaatgagctgaccggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagggaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +acgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +gaatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcgggttggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcctgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtctcactactcatcaaa +aggtccactggggagctcatgcccctagcagctagaatggggacccatgcaactatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctataagaggggtaatgactatgtagtcattggagtccacacagctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccgcctgagaaatggtcattcgcgcaagcttgcgcgtcccttgacaagaccacttccagcggtcacccgcac +cacatgcggaaaaatgatggctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgcttaaagatgaattggtcaaa +actgacaaaatatatggtaagatcaaaaagaggcttctctggggctcggacttgggaaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacgcatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaggacctcctatctcctagcgtggtggacgtgggcgacttc +acaatatcgatcaacgagggtcttccctctggggtgccttgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatttgtcccctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgataaaactgaaggaccccttgtcatctccgaagacttgaat +ggcctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcagatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagacccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgatccccttacccgatgttaggaacaatttctaccatta +taatcaatcaaatgac---cccactatcaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtctttacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgacggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcata----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcaca----------------------------------actacaca----------------- +----------------atgaatttggccactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaagacagatggctcgaca--------cgc-----------agccacaaagctacagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccagaatggtgaaactgcccacaggaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatttggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcgca +atctgatgtggctctactaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggttcacatgatttggttatcccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcaa---------cataatggctggagctttctttgctggattggcatctgacgtccttggctctgggctt +ggttctctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaagcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcagcaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgaggcagatgcagcccgtggggcgatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggacact---------------------------------g +ccgggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccccgctcggggttcctct------------------ag +cacatctt-----------ctaaa------------tcttctattgctactt-------------------- +----------ctttgt-----attcaaatca------aactgccacaac----------gag--------ac +ttggttc--------tacagctggctctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tct---------tt- +-------a-------ga---gtcttgaaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KP784695.1/1-7570 |Norovirus GII/Hu/ZAF/2012/GII.P4_GII.4/Empangeni/9693, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaaaacacccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctctccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcttagtggagtccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagaaaagattgggaaaatgtt +gtcatccgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagcggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccctgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaatgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtattgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgagtttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgtaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagtgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaaatgtgtccaggaagccctgtactccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agactggtcgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgaaaaactcagctttgaggccccgccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacgctactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +accgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcttatcttggtggaaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagctgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgaaaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggccaattccctcttc +tctttctatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctattgggggaggccgctctccacggcccagcattttacagcaaaatc +agtaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtggttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccggc +ccccctaggaactccagatttcgtggggaagatccaaggtgtgctcacccaga------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcta---------ctgacacaga +caatgattt---tgtaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtaatactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactattaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggtttcctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaagcaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +actttcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----c------ttttc------------tc----t--------tcttt- +-------t-------gt---gtcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KP784696.1/1-7570 |Norovirus GII/Hu/ZAF/2012/GII.P4_GII.4/CapeTown/9772, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatcct +tcc-----------------------------tcctccacccaacgg------ggaggatgaactagtggta +tcctacagcg----------ccag---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgttcctccactcaaacaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatttaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttagaagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcctcactattcac +cagacccattaaggacatagtagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggcgattatgaactgcaaggacctgaggaccttgcagtgga +attggtcccaatagtgatgggggggataggtttggtgccaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcgattgaaaacaaccacatgaccaccctactcaaagacaaagatagcttggcaactta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgtgcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +aaactttgaagcgtg-ctcgagacgcattgacttcctcgtttacgcagaagcccctgaggtggagaaggcag +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatattgcgatcaagaagtgccagatagtatacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaattagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagaaggtctcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtat---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgagaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaaggaacatactgcggcgcaccaatcttgggcccagggagcgctccaaagctcagtgccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctatgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggatcagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaaaaagaggctcctgtggggttcagatctggcaaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagaccttgat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggatcaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccgcggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacctgatgttaggaataacttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgactaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcactgg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtgggggagattcaaggcgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagaattcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccatcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggtctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +aggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +caaatctt-----------ctaat------------tcttttactgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggtcttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ttttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttgaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KP784697.1/1-7570 |Norovirus GII/Hu/ZAF/2012/GII.P4_GII.4/CapeTown/10105, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttctttaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattagggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaagaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaagattggaaaaatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaggacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgttaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaattggccggtgccc +tacaccatctaaggtgcgctagaatcaggtactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaaaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgatgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtaytccatagaagagtaccttcaggacagagataggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaaa +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggtttggtcacaggctctgaaa +tcagaaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcgaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcctagaagaaggtgcgcccgaagggaccgtggctacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggccataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgat +agtaagggaacatactgtggtgcaccaatcctgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctaygaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaagccgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggacattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgctggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtactagcagcagcactggaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttaaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagacccaccaaattttccaactgaaggcttaagccccagccaggttactatgttcccccatat +gatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccacccttaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagtcctcacaagaccatcccccgattttgatttcatattctt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcactccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgccgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattggggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t----tt--------tcttt- +-------a-------gt---gtctttcaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KP784698.1/1-7570 |Norovirus GII/Hu/ZAF/2012/GII.P4_GII.4/Johannesburg/BW, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatggaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +agaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattttggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagaaaagattgggaaaatgtt +gtcatctgctgcgtccactctgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccctgctcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggcaaagagaatcgcagcctcccttacaggagaccagcgtgtgggactcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattattaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgagtttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgtcgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacggatgcccaaaacctaag-- +-gat----gatgagg---aatttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaggaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggagttggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaagaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggaattcttt +ggagtccccatcaaacaaatacaggtgcataagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacgctactcatcaaa +aggtccaccggggaacttatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatctaacgccaagagcatggacttgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacaattgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgaaaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaag +actgacaaaatttatggtaggatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggccaattccctcttc +tctttctatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttaacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taaccagtcaaatgac---tccaccatcaaactgatagcaatgttgtacacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagtcgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtactcacccaga------------------- +-----cc-----acaaggacagatggctcaacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttactccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactattaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgccagggctacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------ccttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataagaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc------------tt----t--------tcttt- +-------t-------gt---gtcttttaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KX907727.1/1-7514 |Norovirus Hu/USA/2015/GII.P16_GII.4_Sydney/CA3477, partial genome +---ggtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaagagtggagttgacgccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattacttgccgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacactggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctcttcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagtcggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagaaactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctccagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtaccttcaagatagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgtcccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtgatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgttatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaaccctggat +cctccacaaaaatggacatacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgagaaaatctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatacaaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctgctggcccctagtgtagtagatgtaggagacttt +aaaatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactccatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctggcccctgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctagc------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaagagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU935739.1/1-7581 |Norovirus GII isolate 0907-26, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccgttgagtgaaagggagcacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggaccaccggcttctttaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaattaaggacctattgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacttttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcttccctgataggtgattttgaattgcaagggcctgaggacctggctgtgga +gcttgtacccgtggttatgggtggcataggaatggttctcggcttcactgctgagaagataggccgcatgct +atcgtccgctgcatcaacactacgggcgtgcaaagacttggggaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactttagatctagaagaagagaaggcaaggaaactgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactagctagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtggggctcgtcccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgacttcctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccctggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +atgaccttcaaacatataactttgacaccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaagtaccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagaccgcaaacgaagtgggtgcagcac +tccttagactcagacaggcaagagccagatactatgtcagctgcttccaagacctcgtttacactctaatgc +aggtcgccggagcatcattcgtcgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaagggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaggtggcagtcgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaagcagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccattgggcactggctggg +gtttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgaactcttt +ggagttgagatcaaacagattcagattcataagtctggagagttctgcaggtttagattcccaagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacacatgcatccatgaaaatacagggtagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttacgagcctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctattcccaagcatgcgcctcactggacaagaccacttccagtggcagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttgtgggggtcggatcttggcacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagctgcatagccctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgatatcaaccttgatcccatgaagttgacacaaaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactacatggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaacccttatctgagtcatttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +gattgttgatgtaagacagcttgagccagtgcttttgccccttcctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtacacaccccttagagc---aaattc +tggtgaggatgtgtttactgtgtcttgcagagttctgacccgccctgcccctgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccccaatgaagcaattgtggtgcaaccaca +aaatggcaggtgcacactagatggaacacttcaggggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttaggcgccatagatttcaaaggaactgtttttggagtcgctagccaaa---ggaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcacat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gt---------attctgaatc +taatgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------tcggcatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtgccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttctaccaggaggccgccccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggttaatcaattctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaaatggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtggaatatgacttcaataagcag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgaggggtgctgtgaacgcgccgatgacaaaaattttggattggaatggg +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgctctgaatc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttctac-------------------cct--------------atctaggactagtgattgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgccctccacacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----cttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaa- +------------------------------------------------------------------------ +- +>KU870455.1/1-7563 |Norovirus GII.6 isolate NHBGR59, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcact-------------aaagcaccc +agcagtga----------------ccagcactgtccaacagttaagatcgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggataccggatttgacaacagt---gcaaaa +tgaacatgaaaataccccatacactgtccctccactgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagtctcgcgacgatagagctcacccccatatctctatactg +gaggcccgtttacaccccca---actatctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---cagaagaagcatttctagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctttgtgcactcggttcgctgttctc +aaaaccaatcaaggacctgctaggcaagctcaaaccattgaacttactacacctgctagcgtcgtgtgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaactcttc---aacgtcttttggaccccgcc +agacgtctcaaattttatagcctccctgataggtgattttgaattgcaggggcctgaggacttggcggtaga +gcttgttcctgtggttatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcatcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaggccataggtaacaaccacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctggaagaagagaaagcaaggaagctatccaccaaatcatcctcaccggacatcgt +cggcactatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagaaat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaactcatatggcgag +acatctggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagggtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctaaactgtgacaggatcgagaacaa +gggaaaaatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaaggattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggatttgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgaccgcaagggttgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +acgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atggaatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaagatctgaaggtcg +ccttgagagatgtaaagtttaatgagtgtgaaataatttacaggaactctaagtaccgggtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggaccacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgctggggcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggaaaggtgggtaaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttca +agagaatcagggaagagaggaacggaaaatattccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaaaataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaagaggaaaggggggtacttggcttagtcactggttcagata +tcaggaagaggagaccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggact +acaatgagagacttgactttgaggctccaccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgtcctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacaaattcaaatccacaagtctggggagttctgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatacttgttaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcgtccatgaaaatacagggtagg +accgtcggtggccagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggcgactgcggttgtccttacatctataagcgtggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatttgtgccactcaaggacaagacggagaggcagtcctcgagggaaatgaa +gacctcggtacctactgtggtgctccaattctgggccctggtaaagcgcctaaactcagcacaaaaactaaa +ttttggcgctcatcaccagatgccctacctcctggtacgtatgagcctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcagttttagaagaggctaaaaagacagtgatgaacgttctagaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgtcaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaagcatgtgcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagaaaataaagaagagacttctatgggggtcagaccttggcacgatgatcaggtgt +gccagggcttttggcggccttatggacagtatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcagaggagcattctttccgccgccatggaggtgatgg-tgaggttctctg +ctgaaccagaatt-ggcacaagtggtcgcagaggaccttttagcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacgtcgcaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccactcctgtttc +tcattttatggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgcagatcgattgcacgggatccagctggatggtttggaaaattggatcaagactca +atcctcaggcaattatactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctactcagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaataatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcagaatataattga +cccctggattagagaaaattttgttcaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctacccctccccgatataaggaacaggttcttccatta +caaccaggaagacacc---ccccggatgaggcttgtggccatgctctacacgcctctaagggc---taattc +cggagaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattctt +agttccaccaactgttgaatcaaaaacaaaaccctttactctacctattctaacccttggtgagctgtctaa +ttcccgt---tttcctgctgccatagatatgctttacactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgtacccttgacggcacgctgcaaggcacaacacaattggtcccaacacagatttgtgcctt +tagag-----------------------------------------gtactctgatcagtcag--------- +----------aatgcgagagcg------gc----------------------------cgatttaacag--- +--attccccccag--------agagcccgtg----------------atcacccg----------------- +----------ttgcacgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgacttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gctcatgaagcacacat +tgacacaactgatccaaagtatgcacctaaattaggcacaattctcat---ta---------aatctgaatc +tactgattt---caccacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggcgaca---------------------acaattggagacagtgggaattgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccctgctgtttccccatctttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacatttctaccaggaggcagcaccttcgca +atccgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaagttgcacag +agaagggttcctcaccgtggccaattctggaaacaatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattctatacacttgcccccatgggatctggacaggggcgtaga---------ag +agctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcattcaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaagcaggggatgttgaccgctggc +ggcttttctcctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggagtggc +acaagatattgggcacctaacagcatgaaaaccacaagctactcagg-acaattctctagtagccctgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aattaactca---ttcaacagtgttgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +gaatgaaaggcttggcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcag------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcctatgt------------tcaacacgcataggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagagtg-------- +-------att-aggc--------------------tttcttt------cc-tttcttcc---t--tcccttt +t------------ctct-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU757046.1/1-7550 |Norovirus Hu/GII/CN/2013/GII.17/13010141, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatgcc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacgctgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtggaatgatcttggaagagggtgcccctgagggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggtacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757047.1/1-7550 |Norovirus Hu/GII/CN/2014/GII.17/1401084, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagaaaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagagccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgaatggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactggactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaagcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggatacactgagggtcggcaaccaactgaaaagtgtcaaaaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtacccataagccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggtacaacgcca +ggtgattgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggcacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctagaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaaaacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccaatttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgaggtgggcgatttc +aaaattgctatcaatgaaggcctaccatctggcgtgccttgcacctctcaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtggagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgacgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagaaatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757048.1/1-7550 |Norovirus Hu/GII/CN/2014/GII.17/1402047, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacacttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgagggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggacccatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaacacaacttccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaagcttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgaggtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaactctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaactggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattctactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacatttttccatta +taacaaccaacctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757049.1/1-7556 |Norovirus Hu/GII/CN/2014/GII.17/1401169, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacagcaaaacctccagtggttacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttatgggtggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757050.1/1-7556 |Norovirus Hu/GII/CN/2014/GII.17/1401184, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacagcaaaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757051.1/1-7556 |Norovirus Hu/GII/CN/2014/GII.17/FX141210-5, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagcgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctctattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacaggggggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaatctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacagcaaaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcgtgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU757052.1/1-7556 |Norovirus Hu/GII/CN/2014/GII.17/FX141226-31, complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacaggggggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgcggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggtccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttttggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacagcaaaacctccagtggatacccgcac +catgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttatgggtggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtcttcactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtaccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC175468.1/1-7570 |Norovirus Hu/GII/JP/2016/GII.P16_GII.4_Sydney2012/Kawasaki194 genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggctaggcccaaacagcct-gccccgagagacgaaccacaa +aag---------------------cccccaagaccaccaactcccgagttggtc-------aagaggatacc +ccc-----------------------------tcctccacctaatggcgaaggagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacagcattcagtgttccaccactgagcttgagagaaaacagggaggccaaggaaccgct +aacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggtttagt +gttgggggtgcacaaaccacctgcagccataagcatggcaagagtggagttgacaccgctgtcattgtactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcgtt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtgttagacctcaatgactcatggct +tag---caggaggatggtgcaaagaacaacgggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctaccatggatgactccaaaattaagaaggtagcaaatatattcctatgttcattgtccacactattcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatattgaacatcctggcaacgtgtgactg +gacgtttgccggaatagtggagtctctgatattatttgctgaactcttc---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttactcggggactacgagttgcaagggccagaagacctcgccgttga +actcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacactcagggcttgcaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaggaggccaatgagctagccatggtgagggccatagaggatgccgt +actagatcttgaggcaatagaaaataaccacatgacaaccctgttgaaagacaaagacagcttagcaacata +catgaaaacattggacatggaggaggagaaagccagaaggttgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgctggctcgaatagcagcggccaggtcattagtccacagggccaaggaagagct +gtctagcaggataagaccagtagttgttatgatatctggcaaaccaggaataggcaaaactcatctggccag +ggaggtggcaaggaaggtggcatccactctcacaggggatcaaagagtcggactcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgcccttcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgctgaggcaccagaagtagaaaaggcaa +aacgggactttcctggtcagccagatatgtggaaggacgccttcaagccggacttctcacacatcaagctac +agcttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ctaccggttctctgattgctcgtgcgtcaggcctactgcatgagaggatggatgaatttgaactccaaggtc +ccacaatcaccaccttcaatttcgaccggaacagaatcacagcattcagacaattggctgcagaaaacaagt +atggattggtggataccatgaaagttggcaatcaactaaaaggagtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgaccatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaagatcaagaacacctctgtacagaccaacaacgagttggccggggccc +tgcaccatctcaaacacgcccgaatcaggtactatgttaaatgtgtgcaagaagcagtctattccatcatac +aaattgccggcgctgcgtttgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggt +cgaagccacaatt---agatcaaaatga--------atcagagactaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccattgccaaggccacggaagaagacttctgtgaagaggaggagatcaaaatccgtcaga +gaattttccgccccaccaggaaacaaagaaaggaagagagggccacattagggctagtaacaggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacccaaagggaagctgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gtttctgggtatcac-caagcctgttcataacatcaactcatgtaatccccgcaggcataacagaagcattt +ggagtccccatcaaacaaattcagatccacaaatcaggtgaattttgccgattcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgaaggcaccgtggcaactgtgctcatcaaa +cgccccaccggagagctcatgcctcttgcagccagaatgggaacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggatcaaatgctaaaggaatggatttgggaacaactcct +ggtgactgtggctgtccttacatctataaaaggggcaatgactatatagtcattggggtgcacactgcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggtgcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgccccttccaccagggacatatgagcctgcctacctcggtggccgtgatccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgaacccaggggc +aaacctccaagaccaagtgtattggaagcagccaaacaaaccattatcaacgtcctcgaacaaacactggat +cctccacaaaaatggacgtacgcacaggcgtgtgcctcacttgacaaaaccacctccagcgggcatcctcat +cacgcccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagcactcaaggacgagctagtcaag +actgaaaaagtctatgggaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gctaggtcatttggtgggctcatggacgagatgaaggcacactgcatatcactcccagtacgagttggcatg +aatatgaatgaagatggcccaataatatttgagaaacattccagatataaataccactatgatgcagactac +t-ctcgttgggattcaacacaacagagggcagtgctagcagcagccttggaaatcatgg-tcagattctctg +cagaaccacaatt-ggcacaaatagtcgctgaggatctactggcccctagtgtagtagatgtaggagacttt +aagatcacaataaatgaagggctcccatctggtgtgccatgcacttctcaatggaactctatcgcacactgg +ctgctaactctctgtgccttgtctgaagtcaccaaactgtcccctgacattatacaagcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgacataaaattggaccctgaacagttaaccgccaaattg +aaggagtacggcctgaaaccaacccgcccagacaagaccgagggacccctgatcatcagtgaagatttgaac +ggactcactttcctccgaaggacggtgactcgtgacccagctggctggtttggaaaactggaccaaagctca +attttgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccattct +caaagacccatacagctcatggcactgcttggtgaagcctctcttcacggaccctctttctacagtaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggggagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaactttccaactgaaggcttaagtcctagccaggtcactatgttcccccatat +aatagtggatgttagacaattagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcagtcaaatgat---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgttttcacagtttcgtgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacaactgatggcgtgcttctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaactatgacccaacagaagaaatcccagc +acctctaggaactccagattttgtggggaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ccgacacaga +ccatgattt---tgaagctaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtacatctagcccccgctgtagcccccacctttccgggtg +agcaactgctcttcttcagatccaccatgccc------ggatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcacaa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctcatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactataacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggg--------------atgc---------------- +------------------------------tgtccctgctcggggaccctcc------------------aa +caaatctt-----------ctaat------------tcttctactgccacctctg----------------- +-------------tgt-----attcaaatca------aactatctcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa--t-----------gtgaaaagac-------- +---a-a-aac-tgat-----ta-----t------ctttct-----------tt-------------ttctt- +-------------tagt---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KX268709.1/1-7537 |Norovirus Hu/GII.P7_GII.6/Maryland/2014/USA non-structrual polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +------------agat---ggcgtctaac-gacgctactactgcctttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccaccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgcccctcagttaagatcgggaccaagacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaactgtgcgcgggttaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatatactgtccctccattgagtgaaagggaacacagaccagctactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggtgttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtctacactccca---actatctggtctgcccagacacgttgaagggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaggagcatctctaggaccaccggcttcttcaaaccataccagtcttggaataggaaacccct +tccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaagccaatcaaggacctattgggcaaactcaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---ggcatcttttggacaccgcc +agatgtttccagtttcatagcatccctgataggtgattttgaattgcaagggcctgaggatctggctgtgga +gcttgtacccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgtatgct +atcgtccgctgcatcaacactacgggcgtgcaaagatttgggaaattatgctcttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaagagaaggcgaggaagctgtccaccaaatcatcctcgccagacattgt +cggcaccattaatgccatactggctagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagcgagtggggctcgttccacgcaacggggt +tgatcattgggacgcctacaggggagagagggtggttttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagctggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgtttgacagtgatgtcatcataattacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagaatcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcactatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatataactttgataccaacagagtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggctcagcgcttaagagtgtcaaaaccttggaagatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttccaatg +gcaaaggttctgtctctgttgacaaagttgaggaccaaacatcccaggccgcaaacgaagtgggtgcagcac +ttcttagactcagacaggcaagggccaggtactatgtcagctgcttccaagacctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgtt +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggtctgagtgatgaggagtatgacgagtaca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaaggggggtgcttggtttggttactggctcagaca +tcaggaagagaagaccagacgattttcagccgaagggcaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccaagtgtctggtcaagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacgcacgtcctacctaaggggattaatgagctcttt +ggagttgagatcaaacagattcagattcataagtctggggagttctgcaggttcagattcccaagaccaatt +agaccagacgtcacagggctcgtgttggaggagggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgctccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgttcatcaccagacgctttgccgccaggcacttatgaacctgcctacttgggaggtaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaaaccgtggacctactcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgccaggaaaaatgaccattggaatggggaatccttcactggccccctcgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgaactagtcaaa +actgataagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggcctcatggatagcatgaaggcaagctgcatagctctcccatgtagggtaggaatg +aacatgaatgaagatggccccatcatatttgacaagcattctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcgttctctcggccgctatggaagtgatgg-tgcggttctctg +ctgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaagctc +agagagtatggcctggtccccacccgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgcaggtcaattgcacgggacccagctgggtggtttggaaagttggaccaagactca +atcctcagacagttgtactggacaaggggccccaaccatgagaacccatatgagagcatggtccctcattcc +cagcgggccacacaacttatggcccttctcggtgaggcttcactgcacggtccccagttttacaagaaagtt +agcaagatggttattaatgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccaatga +ggttatggcgcttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaactttgttcaggcaccacagggcgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaactaggccctgagctcaacccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacatttccctgttgagaacattagtgcagcccaaatcacaatgtgcccccatgt +aatcgttgatgtgagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taaccaggaaaatacc---ccccgaatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttttt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattctgactcttggagagctgtccaa +ctccaga---ttccccgctccgatagacatgttgtacactgatcccaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggcgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagatttcaaaggaactgtgtttggggtcgctagccaaa---gaaacaccacagggaa +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcatat +agacaccacaaaccctagatacaccccaaagcttggctctgtgttgat---gc---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gctttaccccca- +--------ttggtatgggagccg---------------------atgattggcaccaatgggaattgcccga +atattctggtcac-ctcact------cttaatatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcattctcttcttcagatcagtggtaccgt------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggaatgggttcagcatttctaccaggaggccgctccatcaca +gtccgcggtggctcttatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcagttctacacactcacccccatgggaactggacaggggcgcaga---------ag +agttc---------aataatggcaggagctttcttagctggattggcaggtgacgccataacaagtggtgtc +gggtccctaatcaatgccgg---ggccaatgcaattaaccagaaggtagaatatgactttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaagagatgttgcaa +tcacaagtactggccactaaacagctccagcaggagatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtactttgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtgca +ta-----------ggcaacccactttaccc---cgttctgaacc---------------------------c +ccaa-------------------aaattaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatctactgctccttcac----------------- +---------------------aatcaactca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagtagc +ttccac-------------------cct--------------atctaggactagtgactgggtgagaggaca +aaatgaaaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +agcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------gatggtg------ct-ctccaaac---a---actttt +g------------tcac------------------------------------------------------- +------------------------------------------------------------------------ +- +>KU557783.1/1-7555 |Norovirus Hu/GII.17/35-0584/GD-JM/2015-03-14 ORF1, VP1, and VP2 genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgatctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctaggcgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcaccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaaggaccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgctcctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagcggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaactagcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccattgg +ttacttaccttgtgtgccctttctgaagtgacaggattgggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagatataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaacggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccggcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacggcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU557784.1/1-7555 |Norovirus Hu/GII.17/35-0585/GD-JM/2015-03-17 ORF1, VP1, and VP2 genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacta +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctaggcgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtatattggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaaggaccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgctcctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagcggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaactagcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccattgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccggcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacggcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KU557785.1/1-7496 |Norovirus Hu/GII.17/1085/GD-MM/2014-11-04 ORF1, VP1, and VP2 genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgatctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtatattggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgacattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacacgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggtagatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactaccctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU557786.1/1-7417 |Norovirus Hu/GII.17/1711/GD-JM/2014-12-26 ORF1 and VP1 genes, complete cds; and VP2 gene, partial cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttacagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcttgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccatccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgtcgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagttgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccggtgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataactga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctgactcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattctttagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctgg---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU557787.1/1-7417 |Norovirus Hu/GII.17/18-1712/GD-JM/2014-12-26 ORF1 and VP1 genes, complete cds; and VP2 gene, partial cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcttgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctaggcgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctgg---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU557788.1/1-7497 |Norovirus Hu/GII.17/2238/GD-JM/2013-08-30 ORF1, VP1, and VP2 genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagcgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattcttgaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgtgatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggagggataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggacctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagagaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccgcagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaagggtaagatactatgttaaatgtttccaagaagccatttactctctacttc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattttgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccgatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccagggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagatccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcaggggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaggttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgctgctggtcttgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgttcccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagactgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtacgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagcttttattgcaggattggcaggcgacatgctcacatcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtccctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggtgcactcaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cagtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU557790.1/1-7504 |Norovirus Hu/GII.17/1548/GD-MM/2014 ORF1, VP1, and VP2 genes, complete cds +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacta +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgtggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtgcaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagatagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgatatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcaccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgttgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggcaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caacgacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccggcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacggcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-t------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT779557.1/1-7549 |Norovirus GII isolate Hu/GII.P16-GII.3/Omsk/O1370/2012/RUS, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagctt-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccagcc +ggatgtggccaacacggcattcagtgtcccaccgctaagcctgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctgtaagcatggcaaaagtggagctgacgcctttgtcgttgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgattcatggct +taa---caggagaatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacctct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtgcctgtggtaatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaacaatcacatgacaactttgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgtcatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtttacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagccggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatggaaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggttaagaacacctctgtacaggtcaacaacgagttggccggagccc +tgcatcacctcaaacatgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcatttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaaaggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaggagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaattcctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggtaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgt +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgcgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacatgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaactgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaagttggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +agagtttcaataaatgaagggctcccctctggtgtgccatgcacttctcagtggaattccatcgcacactgg +ttgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaagccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttgggaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaggaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +agatggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggcgcagcgatagcagcaccccttactggtcagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaacccctacctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagattacaatgtgtcctcatgt +aattgtagatgtcaggcagttggaaccaatcaacctcccgatgcctgacgtccgcaacaatttcttccatta +taatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtatactccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtgttgactaggcccagtcctgacttctcattcaatttcct +cgtcccgcccactgtggaatcaaagataaaacctttcaccctccctattttgaccatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggcgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgatcaagctgacgcagcaacccct----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------cattggcacatacaactagacaacctaaatgggaccccgtatgaccctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggatacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccagaatcaaccaataa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ttattccggtcag-ttcacc------cacaacacgaatctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacattagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcatttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaactaagaggctacaggttgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcatagagtt---------acaccaaattttaaaaccaaccaa--- +gccccaa----------------aatccacgcccagca--------------gtgg---------------- +------------------------------gtcttcagtgagttcaagctca------------------ac +ccaactca-----------ccaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcgggtccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctctcaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tatttag--t-----------gaaaaga----------- +---t-t-att-ctta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KX356908.1/1-7556 |Norovirus GII.17 strain GII.17/KM1509/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +acacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaacacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +tcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttggtagatcctggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcggatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggagactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcatcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgatacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgatagtgatgccataattgtaacaaccaaccttgcaaacccagcgccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccattacagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgagttcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccttggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtgcaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcgaaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaacccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggact +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaaacatggatctgggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcgtaccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcattaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggccccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcggtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaacagtggcagaggacctgctgtcaccaagtgtggtcgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggtgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaaattggaccaaagctcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttatagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgacttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacatttttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggttc +aggtgatgatgtctttactgtttcttgcagggttttgactaggcctactcctgattttgagtttacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctctcatctgacatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtgagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacggggcgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagaccatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaagtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagttc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------gttttag--t-----------gaaacaagac-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AB985437.1/1-7533 |Norovirus Hu/GII/2-37/Tokyo/1987/JPN genes for polyprotein, capsid protein VP1, capsid protein VP2, partial cds +-------------------------------acgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttatagcg----------tcaa---agacggcgtttctggtctgcctgagctttctactgtcaggcaacc +ggatgaaaccaacacggccttcagtgttcccccactcaaccaaagggagaacagggatgccaaggaaccact +gactggaacaattctggaaatgtgggacggagagatctaccattatggcctgtatgtggaacgaggttttgt +acttggtgtgcacaaaccaccagctgccatcagtcttgccaaggtcgaattaacaccactctctttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagactgcatggagaatcgtt +cccctacacagcctttgacaacaattgctatgcattctgttgttgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactatggatgactccaaattaaagaaggtggctaacatatttctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaagctgagacctcttgacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgttgattgcccccttgctaggtgattacgaactacaggggcctgaggacctcgcagtgga +actcgttccaatagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcgtctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaagcgaactggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaattgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgttgtgatgatattaggcaaaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcttccctcacaggggaccagcgcgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggttgttctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggctacaagagctcgctgacacttgccccctcacgctaaactgtgacaggatcgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgtagatgcccctgaagtcgaaaaggcga +aacgtgatttcccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactgg +cgctggccccacagggtggtttcgacaagaatggaaataccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgagcatcaggactactccatgagaggttagatgagtacgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgctcgcttttaggcagcttgctgctgagaacaaat +acgggctaatggacacaatgaaagttggacgacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctacacacttgagtctgatg +gcaaaggaaatgtaaaagttgacagagttcagagtgccaccgtgcagaccaacaacgagctggccggtgccc +tacaccatctgaggtgtgccagaattaggtattatgtcaagtgtacccaggaggccctgtattccatcatcc +aaattgccggagctgcatttgtcaccacgcgcatcgtcaagcgtatga------acatacaagacctctggt +ccaagccacaggtgggagacacagagga--------gactaccaacaaggatgggtgccctaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatccgacgacatcaaaactgagggcaagagagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtcttagtgatgaagaatacgatgagtaca +aaaggatcagggaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaagaggccaagattcggcaaa +ggatttttaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaaaaggaacccagatgatttcaagcccaagggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaagagttcttc +ggagtccccatcaaacaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggccacactactcatcaag +aggccaactggagaacttatgcccttagcagccagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggccaaatgggcatgcttctgacagggtccaacgccaaaagtatggatctaggcaccacacca +ggtgactgtggctgtccctacatctacaagagggaaaatgactacgtggttattggggtccacacggctgcc +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggcggtgac +gataagggaacctactgtggcgcaccaatcctaggcccaggaagtgccccgaaactcagcaccaagactaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agaatcaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcacagaacccaggggc +aaaccaccaaagccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaaatggtcattcacgcaagcctgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcactggcaagttggcagatcaggcttccaaggcc +aacttgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgctcaaggatgagctggtcaaa +accgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctgatggatgagctcaaggcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagagacactccagatataaatatcactatgatgctgcctac +t-cccggtgggactcaacacaacaaagggccgtgttagcggcagccctagaaatcatgg-ttaaattctccc +cagaaccgcacct-ggcccaaatagttgcagaagaccttctctctcccagtgtgatggacgtgggtgacttc +aaaatattaattaatgagggtctcccctccggggtaccctgcacctctcagtggaactccatcgcccactgg +ctccttactctctgtgcactctctgaagtcacaaacctgtcccctgacattattcaggccaattccctcttt +tccttctatggtgatgatgaaatcgtgagtacagatataaagttggacccagaaaaattgacagcaaaactc +aaggaatacgggttaaaaccaacccgtcctgacaaaactgagggaccccttgtcatctctgaagacctggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaattggaacagagctca +atactaaggcaaatgtactggactaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccagcgttttacagcaagatt +agcaaactagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggcggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccctgggccctgatttaaatccctatctttctcatttgtctagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcactgc---cgggaaagtcat +atttgcagcagttccaccaaactttccaactgaaggtctaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacccgtgctgatccccctgcctgatgttaggaataatttttaccatta +caatcaagcacatgat---tctaccctcaagttgatagcaatgttgtacacaccacttagagctaataatgc +cggggatgatgtctttacagtctcttgtcgagttctcacgaggccatcccccgattttgactttatattcct +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaatcttaactgttgaggaaatgtctaa +ttcaaga---ttccccattcctttggaaaagctatacacgggtcctagcagtgcctttgttgtccaaccaca +aaatggcagatgtacgactgatggggtactcttaggcaccacccagctgtcagctgtcaatatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ta---- +-------gccatg----------------------------------actataca----------------- +----------------atgaatttggtatcccaaaattggaataattatgacccaacagaagaaatcccagc +tcccctgggaacgccagactttgtgggaaagatccaaggcttgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgatacaaa +taatgattt---ccaaactggccaaaacacaa---------------------------aattcaccccag- +--------ttggcgtcattcaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ctactcaggcaca-tctggt------cataatgtacatctggcccctgccgttgcccccactttcccgggtg +agcagcttcttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctggattgcctgctcccccaggagtgggtgctgcacttttaccaggaagcagccccagcaca +atccgatgtggccctgctgagatttgtgaatccagatacaggtagggtcctgtttgagtgcaaactccataa +atcaagttacatcacagtggctcacactggcccgtatgatttggttattccccccaatggttattttaggtt +tgattcttgggtcaatcacttctacacactcgcccccatgggaaatggaacggggggcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaataatagaaaatta +caacaagcttccttccaatttagtagtaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaaggtctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacagcagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcggt +acaaggtactgggcccctgaagccagggtcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gccctcgggggcact---------------------------------g +ccaggaa----------------ggactaatcctagggttcc------------------------------ +------------------------------cgttcctgctcggagctctccc------------------ag +tgtacttt-----------ctaat------------gcttctactgctacct-------------------- +----------ctgtgc-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccgttgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggatca +aaacaggaatgtgtcacctttcatga---ggggggctctcaacacatcgttcgtcacccctccatctagtag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcatacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-g-a-t-tgat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AB985442.1/1-7533 |Norovirus Hu/GII/2-46/Tokyo/1987/JPN genes for polyprotein, capsid protein VP1, capsid protein VP2, partial cds +-------------------------------acgctttcgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +agt---------------------cccccacgaccgcctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacctaacgg------ggacgatgaattagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccactgtcaggcaacc +ggaagaagccaatacggccttcagtgttcccccactcaatcagagggagaacagggatgccaaggagccact +gactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacacccccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctacacagcctttgacaacaaatgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagattggaataggaaacccct +ccctactgtggatgactccaaattgaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaagctaagacctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctagaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggacgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgtcgtgatgatatcaggcagaccagggatagggaagacccacctcgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggtgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaagcaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggagaccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactacgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcatcaatcctaggcccaggaagtgcttcaatactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaagcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgcctac +t-ctcggtgggactcaacacaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaagggccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaggacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaggagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtacacaccactcagggctaataatgc +cggagatgatgtcttcacagtctcttgtcgagttctcactaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactacccagctgtcagctgtcaacatctgtaactt +caggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +tcccctgggaacaccagattttgtggggaagatccaaggcctgcgcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaagacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ctactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcagcgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gcctttgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctagggttgc------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgc-----actcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgc------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctga +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-g-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC145786.1/1-7482 |Norovirus Hu/GII.2/Akita8_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggattcttcagaccctaccaagaatggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgagctcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcaaggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaataatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggtggttttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagccattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaagatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaattacaataaatgagggactcccttctggtgtaccttgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcactggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccattacctgatgttaggaataacttcttccacta +tagccagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttttatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +cgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccgatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagagaggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145787.1/1-7485 |Norovirus Hu/GII.2/Miyagi1_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaacgttgccgttgcttac------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtcc-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtacaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +gttggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaagaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcattagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggtaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggccgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctatacagaccaacaacgagttggctggagccc +tgcatcacctcaaacatgcccgaatcaggtattatgtcagatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaggaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggctacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatattggaagaaggtgcgcctgagggcaccgtggcaaccgtactcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaagattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggagcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggcttatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaggggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtatggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaat +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagcaccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctattaagtctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttggt +cttcgccgctgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +taatcagaaagatgat---cccaaaatgagaattgtggctatgctttataccccccttagatctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgaccagaccctcccctgatttcgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggaacttcaagggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------atttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgatttccagggaagggtctttggtattatctcccaaa---gagacaaacataatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcagattcaaattggca---------catggcagac +cgatgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccggtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaagctgccccatcaat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcttttatggctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagattcaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgaccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaattcacatcaatc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ctcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaggcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcctag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145788.1/1-7482 |Norovirus Hu/GII.2/Niigata5_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggcgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacgccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaaccacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggggtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggcaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaatgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtctctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +catgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatacct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145789.1/1-7482 |Norovirus Hu/GII.2/Fukui1_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaatagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggatttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacacctcacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaattcgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtctccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatactggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcctcaaacacgtcccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactctagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagtggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatattc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaatacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------cg +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145790.1/1-7482 |Norovirus Hu/GII.2/Fukui2_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatcccccctaacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagacaaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaaccaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgccccttgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggtggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcggcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcagagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtttc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145791.1/1-7482 |Norovirus Hu/GII.2/Saitama4_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacctatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgtcgccccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145792.1/1-7482 |Norovirus Hu/GII.2/Saitama5_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgctagaccttaatgactcatggct +caa---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +gcccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtccacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgactg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagacaaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaacctcgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggcttcgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaaccaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaaggaaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagttttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagccattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggtggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcggcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggggacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcagagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgctgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtgctccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcagatt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggttctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatctggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145793.1/1-7482 |Norovirus Hu/GII.2/Osakacity5_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-tccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggagtttctggcctgcccgatctcacaacagttccccaacc +agatgcgactaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctaggtcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtagcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttctaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacgggccctctttctacagcaagatt +agtaaattggtcataactgagctcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +cgagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaatcaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145794.1/1-7482 |Norovirus Hu/GII.2/Hiroshimacity2_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagagttgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggtggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgtaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagatagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaagcacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgccctcctttgcc------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145795.1/1-7482 |Norovirus Hu/GII.2/Hiroshimacity1_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgtcataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaactccagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccctccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgcgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatattgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaagtaatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaaggcccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacaatcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ccccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcatcaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145796.1/1-7482 |Norovirus Hu/GII.2/Ehime1_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaactggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtttctccccgtaattcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcgtttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145797.1/1-7482 |Norovirus Hu/GII.2/Ehime2_2012_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgatcaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggacggagagatataccactatggtttgtatgtggagaaaggtctagt +cttgggtgtacacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatcccccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagagaacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctactggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagcaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaagcctg-ttccaggagaatcgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccgcaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtagaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggtgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccccatcaaacagattcaagtccacaaatcaggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggaaatactgtcatctgtgccacacagggaagtgagggcgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaggcatcaaaagca +aacttaatgtttgaggaagggaagcatatgacaccagtatacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgacttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagccggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgatacctcactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccacgacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgtcgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtcccggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaacgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttagaaacaacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaattattcactctcccaatcctcacgcttggggaactttccaa +ttctagg---ttcccagtgtccatagatcagatgtacaccagccccaatgaagtcatatcagtacagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatat +ctct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggtggcta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggccgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacaacctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacagcctttgtcactccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145798.1/1-7482 |Norovirus Hu/GII.2/Aomori7_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ca----cacggcaaggaaaagtttttgggggaag---------------ggtttttttcaaatat +ttttttccccctaaagaaag----ccctcgggggtcggcctaaaccgcct-gccccggggggcaactcccaa +aaa---------------------ccccccaggccccccacccccgaattggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +caa---cagaagaatggtgcagaggacgacaggctttttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatactatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagctctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggctag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttaggactagtgactggttcggaag +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggggaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgagttctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctccctgcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttt +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaattcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataatttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaggtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggtgaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgtcgctccagtatttccagggg +agcgtctgctcttcttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145799.1/1-7482 |Norovirus Hu/GII.2/Akita7_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ca----cacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggctttttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggaaacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtagcaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggggaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgatggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttt +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccatttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggtgaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccccacctatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgtcgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ccccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caaga------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145800.1/1-7482 |Norovirus Hu/GII.2/Akita8_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ca----cacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------ccccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggctttttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgctcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattgtttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtactaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgcttttagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggaaacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtagcaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggggaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttt +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgagcccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccatttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggtgaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccccacctatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgtcgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ccccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caaga------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145801.1/1-7482 |Norovirus Hu/GII.2/Miyagi2_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaacccacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaagggtacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacattctcaagaggctcaacggggaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagacttaggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcgctgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +ggggaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagggtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaactggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggctcccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagccattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagataaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtactaatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgcacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggccataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccatccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145802.1/1-7482 |Norovirus Hu/GII.2/Osaka4_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgattcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattgtctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaacatcttaaacattctggcaacatgtgattg +gacgtttgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactttccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +agcttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcacagctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgtccagaccaacaacgaactggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaagtgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgttcgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aatttatcatttcctccaaggacattaaggaggaagggaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaagagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaggcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcgaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaaacccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggttcgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtggtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctgttgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +tgggcatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgaattcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgtacactggatggggaactccaaggaacaacacaactccaagccagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------ataatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacgc +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttgaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctt +agttcattaattaatgcagg---tgctaatgcgataaatcagagggcagaattcgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggaccacagcctactctgggagatttacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctcttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145803.1/1-7482 |Norovirus Hu/GII.2/Osaka5_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagtca-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttcctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagagaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcatagggaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgagtacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttagtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaagtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgccccagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggcttgctgcatgagaggatggatgagtttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atggactggtggataccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctatcatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattctatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccact---agaccaaagcga--------gccagaggtcaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtattctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagagataaaaatccgccagc +gaatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctccgggtataacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggagaggcgccaaagttaagcacaaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagttaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaagcgtgcgcttcacttgataaaaccacctctagtggacacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagactac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacactgg +ttgctaactctctgtgctttgtctgaagtcaccaacctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagtgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtataa +cgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgac---cccaagatgagaattgtggctatgctttacacccccctcaggtctaatggttc +aggcgatgatgtgtttacagtttcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttctaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtcctcttttgacccctctgaggacatccccgc +ccctctgggcatacctgactttcaggggagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgatactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------ctaaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacattccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgttcgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactgttgaatgggtcagagacca +aaacagaaatttggaaccttatatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------ggtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145804.1/1-7482 |Norovirus Hu/GII.2/Hiroshima6_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggggagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgttgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacattcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagtt +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaatcgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtccctatcaaacagattcaagttcacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaagcacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145805.1/1-7482 |Norovirus Hu/GII.2/Hiroshimacity5_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgctcattatctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagaatccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagtt +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagacatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagagctcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggagtctctatcaaacagattcaagttcacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacgacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agttggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagtcggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145806.1/1-7482 |Norovirus Hu/GII.2/Hiroshimacity6_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccgagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagttccccaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggctaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaggtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---agtacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccttacaccgcctttgataataactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgctcattgtctacactgttcac +taggcctataaaagacatcatagggaaaatcaaaccactgaatattttaaacattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtccctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcgacgctcagggcttgcaaagaccttggtgcctatggtttagaaatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggacctagaggaggagaaagccagaaaactgtccacgaaatctgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagtt +atctagcagaatcagaccagttgtcgttatgatatctggtaagccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctaatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgctttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtaaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agaccaaagcga--------gtcagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaagggaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcctgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaggaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatccctacgggtataacagaggcattt +ggggtccctatcaaacagattcaagttcacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaactcatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctagggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaatactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagaccagttaaagcccttcaccgagcctaggggt +aagcccccgagacctagtgtgttggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggac +cccccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagttggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtatacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggactcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaattccatctcacattgg +ttactgactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaattctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +agggagtatggtctaaagccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatttggac +ggtctcaccttccttcggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaagacagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgaacccgtggctggcgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaatttttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctattgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +taatcagaaagatgat---cccaagatgagaattgtggctatgctttacaccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------accac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacacaacac +ccct--------ggacacaatgaaccagcaaat--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggacagattcaaattggca---------catggcagac +tgacgatct---cgcagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaacctcgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactgccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggacactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaacggatacttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgattttaatcagagatta +cagcaaa---------------------------------actctttcaatcatgataaggagatgttgcag +gcccaggtccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggaaattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +ttcagca----------------cacccaaagccggccc-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agcacaaacctttcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaacagaaatttggagccttacatgc---atggtgccttacagacggcctttgtcaccccgccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145807.1/1-7482 |Norovirus Hu/GII.2/Ehime4_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataacaactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +caa---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctgctgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccacttttaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggttggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtata +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaaaacttttgtgaggaggaagaaataaaaatccgccagc +ggatctttcgtcccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaggaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgctgctcactggttcaaatgctaagggtatggatctggggacaactccc +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaggctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcatggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aatatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctattctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactacttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcaccggtcaaacaaatataataga +cccttggattagagcaaattttgttcaggcccccaatggtgaatttacagtctctcctcgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgcca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaatttgaatgggtcccctttcgacccctccgaggacatccccgc +ccctctgggcgtacctgactttcagggaagggtctttggtgtcatctcccaaa---gagacaaacataacac +ccct--------ggacataatgaaccagcaaac--------agg-----------gcgcacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LC145808.1/1-7482 |Norovirus Hu/GII.2/Ehime5_2014_JP genes for polyprotein, VP1, VP2, complete cds +--------atgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcctaaacagcct-gccccgagggacaactcacaa +aaa---------------------cccccaagaccaccaacgcccgagttggtt-------aaaaggatacc +ccc-----------------------------tcccccacctaatggcgaagaa------gagccagtcatt +aggtttgagg----------tcaa---gagtggaatttctggcctgcccgatctcacgacagtccctcaacc +agatgcgaccaatacggcattcagtgttccaccgttgagcttaagagaaaacagggaggccaaggaaccgct +aactggggcaataatagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcctagt +cttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaattagcaccgctgtcgttatactg +gcgtgtggtgtacactcccc---aatacctcatctcccctgacactctcaagaggctcaacggagaggcatt +cccctacaccgcctttgataataactgttatgccttttgctgctgggttttagaccttaatgactcatggct +cag---cagaagaatggtgcagaggacgacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccaccatggatgattccaaaattaagaaggtggcaaacatattcctatgttcattatctacactgttcac +caggcctataaaagacatcataggaaaaatcaaaccactgaatatcttaaacattctggcaacgtgtgattg +gacgttcgccggaattgtagagtctctaatattatttgctgaactcttt---ggagtttactggacaccccc +agatgtgtctgctatgatcgctcccttacttggcgaatacgagttgcagggaccagaagacatcgccgttga +gctcgtacctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaagccaatgaactagccatggtgagagcaatagaggatgctgt +tctggatcttgaggcgatagaaaacaatcacatgacagccctactgaaagataaagacagccttgcaactta +catgaaaacactggacctagaggaggagaaagccagaaaactatccacgaaatccgcatctcctgacatagt +tgggacaatcaacgccctgctggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcagaatcagaccagttgtcgttatgatatctggcaaaccagggataggcaagacccacttggccag +ggaggtggcgaaaaaggtggcgtccactctcacaggagatcaaagagttggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgaaagggtcgtgttgtgggatgactatggcatgagtaaccctattca +tgatgcactgcgcatacaggaattggccgacacatgccccctcaccttgaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgatgttataataattacaacaaaccttgccaacccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaagcgccagaagtggaaaaggcaa +aacgggatttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttctcgcacatcaagttgc +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctta +ccaccggttctctgatcgcccgtgcgtcaggtttgctacatgagaggatggatgaatttgaacttcagggcc +ccacaatcaccactttcaactttgaccggaacagagtcaccgccttcagacaactggctgctgagaacaaat +atgggctggtggacaccatgaggattggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtgtccatcaagaggtgccagattatctaccatggatccacgtttgaccttgagtctgatg +gcaagggtgaagttacagtggaaaaggtcaaaaacaccactgttcagaccaacaacgaattggccggagccc +tgcaccacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaggcaatctattccatcctac +aaattgccggcgccgcgtttgtcaccacacgcattgcacgccgcatga------atatacaagagctttggt +caaagccaccatt---agatcaaagcga--------gccagaggttaaggaggagacccccaagttagag-- +-gat-------gatg---aattcatcatctcctccaaggacattaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtac---t +atgaagaactcgccatcgccaaggccacggaagaagatttttgtgaggaggaagaaatgaaaatccgccagc +ggatctttcgccccactagaaaacaaaggaaggaagaaagggccacgttagggctagtgactggttcggaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggatcgtaagctttggttcaggttggg +gcttctgggtgtcac-caagcctgtttataacatcaactcatgtgatcccttcgggtgtaacagaggcattt +ggagtccctatcaaacagattcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacaggaatgatcctggaagaaggtgcgccagagggcaccgtagcaaccgtgctcatcaag +cgccccactggagaacttatgcccctcgcagctagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggtgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatctggggacaactcct +ggtgactgtggctgcccgtatatttacaaaaggggcaatgactacatagtcattggagtgcacacagcagca +gcccgaggtggtaacactgtcatctgtgccacacagggaagtgagggtgaagcgaccctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggggcgccaaagttaagcacaaaaaccaaa +ttttggagatcatcaaacacgccccttccaccagggacatatgagcctgcctaccttggcggtcgtgatccg +cgtgtaaagggtgggccttccctacaacaagtcatgagagatcagctaaagcccttcaccgagcccaggggt +aaacccccgagacctagtgtgctggaggcagccaaacagaccatcatcaacgttctcgagcaaactttggat +cctccacaaaaatggacgtacgcacaggcgtgcgcttcacttgataaaaccacctctagtgggcacccccat +cacgctcgaaagaatgaattctggaacggtgagacctttaccggtaagctggcagaccaagcatcaaaagca +aacttaatgtttgaggaagggaaacatatgacaccagtgtacacagcagcccttaaggatgagttggttaaa +accgacaaaatctatgggaagatcaagaaacgcctgctttggggctctgatttatccaccatggtccgatgt +gctagggcctttggtggtctcgtggacgagatgaaggcgcactgcatatcgctcccaatccgagttggcatg +aacatgaatgaggatggcccaataatatttgagaagcactccagatataaatatcactatgatgcagattac +t-ctcgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccgcaact-ggcccaaacagttgctgaggatctgctggcccccagtgtagtagatgtcggagacttc +aaaatttcaataaatgagggactcccttctggtgtgccatgcacttcccagtggaactccatctcacactgg +ttactaactctctgtgctttgtctgaagtcaccaatctgtctcctgacatcgtgcaggcaaactctatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +agggagtatggtctaaaaccaactcgcccagacaaaaccgaggggcccttgatcatcagcgaggatttggac +ggtctcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcaaatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatgcaactcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaagacaggaacccatgttc +agatggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccagtcactggtcaaacaaatataataga +cccttggattagagcaaattttgtccaggcccccaatggtgaatttacagtctctccccgtaactcccctgg +tgaagtgctactgaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +tgggtatgccggtgggatggaggtgcaggtcatgttggctgggaatgcgttcacagc---cggcaagttagt +cttcgccgctgtgccaccccactttccggtcgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtcaggactttggaacctgttttattaccactccctgatgttaggaataacttcttccatta +caatcagaaagatgat---cccaagatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggcgatgatgtgtttacagtctcctgcagggtgttgactagaccctcccctgattttgatttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcactctcccaatcctcacgcttggggaactttccaa +ttctaga---ttcccagtgtccatagaccagatgtacaccagccccaatgaagtcatatcagtgcagtgtca +aaatggcaggtgcacactggatggggaactccaaggaacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gagaagtgactgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctgtataatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacatccccgc +ccctctgggcgtacctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaaacataacgc +ccct--------ggacataatgaaccagcaaac--------agg-----------gcacacgatgccgtggt +ccctacttatacagcacagtataccccaaaattgggtcagatccaaattggca---------catggcagac +tgacgatct---cacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactt---------aatgacactgaccat---------tttaaccaatgggtggtccccag +gtatgctggtgcc-ctaaac------cttaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgtctgctctttttcagatcatacatcccc------ctcaagggcggtta------tggaa--------- +--ctccagccatcgattgcctactaccacaagagtgggtgcaacatttctatcaggaagcagccccttcgat +gagtgaggtggcccttgtcagatacatcaacccggatactggtcgggcactgtttgaggccaaactccacag +agctggtttcatgacagtctcaagcaacaccagtgccccggtggttgtgcctgccaacggatatttcaggtt +tgattcttgggtgaaccaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +gatcc---------aataatggctggagcttttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgctaatgcaataaatcagagggcagaatttgatttcaatcagagatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gctcaggtccaggcaactaagcagctgcaggcagatatgatggctataaaacagggggtcctggccgctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaacgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctccatgaggactacagcctactctgggagattcacatcaacc--------- +gc---------------------cccagtgaggcaggctgatt----------------------------- +tccagca----------------cacccaaaaccggcct-tc--------aagtgg---------------- +------------------------------ttcttctgtgtcctcctttgct------------------ac +tcagtctt-----------caagg------------ccgaccctgactacaacca----------------- +----------ctgggt-----cctcatatgg------cacagcctcatc-----------aa--------at +tcgactcgc----agtacaaatctctcccaatcaacggtctc------caggg------------------c +tacatc---------------------------------------taggactggtgaatgggttagagacca +aaatagaaatttggaaccttacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gat---------------------------------ggga---cggtctcaaccgttccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcac +acctccgtaagaggggggagtcaca--------agcttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KX079488.1/1-7510 |Norovirus GII.21 strain NoV/Kor/JW, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gcgtattatccaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtccaaacaaccg-tccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aaacaaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggtttgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagagacgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaaggttgaactgtcccccttgtctttgtactg +gagacctgtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatggtacagaggacaacgggcttctttcggccttaccaggactggaacagaaaacccct +ccccacaatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgttcac +tagaccaattaaggacattattggaaagttaaaacccctaaatatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcctgaggacctcgctgtgga +actcgtacctgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgcaaagatctcggagcttatgggctggagatactcaaattggt +catgaagtggtttttcccaaagaaagacgagataaacgaattggcaatggtgagatccatcgaggacgcagt +gctggacctcgaggccatcgagaacaaccatatgacagctctactcaaggataaggacagccttgcagccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgatcaatgccctactggcaaggattgcagctgcccgatctctagtacacagggctaaggaagaact +gtctagcagacctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacggaatgagcaaccctatcca +cgacgccctcagactccaggagcttgctgacacctgccccctaacacttaattgtgacaggattgaaaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgagacttcccaggccagccagacatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaatacccctcatgggaagggtgttatgaagaccctca +ctgctagttccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caacttccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcaactcgctgctgagaacaagt +acggtctcgttgatacaatgagggtcggatcacaactcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatcacagtcaagaaatgccagcttgtgtatggcgggagcacatacacactcgaatctgatg +gcaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgagctctccggcgttc +tgcaccatctcaggtgtgccaggattaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaagatttggagga--------gactagcaacagggagggctgtccaaaacctaaa-- +-gat----gatgagg---aatttgttatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggtctcagtgatgaggagtacgatgagtaca +agagaatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaggaagaggaggccaaaatccggcaaa +ggatatttagaccaacaagaaagcaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgacttcaaacctaaagggaagctatgggctgatgatgacaggagtgttgact +acaatgagaaacttgacttcgaggctccaccaagcatttggtcacgaatagttaactttggtttagggtggg +gcttctgggtctcgc-ctagcctcttcataacatcaacccacgtcattcccaaaggtgcacaggagttcttt +ggagtgcctatcaagcaaatacaaattcataaatcaggagagttctgccggctaagatttccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggaactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctactcacggggtctaacgccaagagtatggatttgggcacaactcct +ggtgactgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagtccacaccgccgct +gcccgtggaggaaacactgtcatctgtgcaacccaaggaagtgagggtgaagccatgctagagggtggcgac +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccctaaactcagtaccaaaaccaaa +ttctggaggtcttctaccacccccctgccacccggaacctatgaaccagcttatctgggtggcaaggacccc +agagtggggggtggtccctcactgcaacaggttatgagggagcaactaaaaccattcactgagcccagaggc +aaaccaccaaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaagatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagaggctttcacaggaaaattggcagaccaagcatcaaaagct +aatttaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaggacgaactagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagctttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagttagggttggcatg +aacatgaatgaggatggacccataatatttgagaaacattccagatacagataccattatgatgcagattac +t-ctcgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcac +cagaacctcatct-ggcccaagtagttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatttcaatcaacgaggggttaccctctggtgtgccttgcacctcacaatggaactccattgctcactgg +ctcctcacactgtgtgcactgtctgaagttacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattggacccagagaaactgacagtaaagttg +aaggaatacgggttaaaaccaacccgtcctgataaaacagaaggacccttaattatctctgaagatttggat +ggcctgaccttcttacggagaacggtgactcgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcaggcaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatc +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgcaggtctcgtaccagagatcaacactga +gaccttgcccctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataatataattga +tccctggattagaaacaattttgtgcaggcccctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaatttggagctagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggagtggaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgcttagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcctgatgttaggaacgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgctatgctctacactcctttaagatccaatgggtc +cggtgatgatgtattcactgtctcctgcagggtgctaaccagacctactccggactttgagtttacatattt +agttcccccctcggtagagtctaaaaccaagcctttcaccctacccatcctaacaattggagagttgacaaa +ttctaga---ttcccagccccgatcgatcagttgtacacttcacccaacgctgatgtagttgtccaacccca +aaatggccggtgcacactggacggtgagctacaaggcacaacacaacttctgacaacggcaatatgttcata +caggg-----------------------------------------gcacaacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacttggtccaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattctgtatggggtgttgactcaaa---acac------------ +-----ccaaaatcccag---ggacgaagtctcc--------aac-----------tcccgtgggatctacat +ctcatccactagtgacaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacac---agccagcaaccaacaatcaa---------------------------aattcacaccag- +--------tagggatagcggtgaatca------------aaacactcctttcaaacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgtcccaagt---gttcaaggtaaccac-----cctactcaagag-- +----------attgattgcctgatcccacaagaatgggtttcccacttctatcaagaatcagctccctctca +gagtgatgtggctttggtcaggtatgtcaatcctgacacagggcgcacaatctttgaggccaaactgcatag +gcagggatttatcaccatagcggccactggaagcaaccccgtggtcgtgccccccaatgggtacttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agctc---------aataatggctggagcttttatagcaggattggcaggtgacatgctcaccaatactgtt +ggttccctggtaacagcggg---ggctaatgctataaaccaaaaagttgaatatgacctcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccaggtcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagactggtcaggg +acgcgttactgggcacccaattcaaccaaaacaacaagccaatctggtcagttctcc-tttgt--------- +aa-------------atgtgcatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctcctccgcgggcgccctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagcttttc---------------- +----------------------ttcccttgg------gactccttcaac----------tca-----gtcaa +caaatct--------t------------------------------------t------------------c +ttcttc---------------------------------------tcgaacggcggactgggttcgaagtca +g---aggaacctgagcccctacatgg---acggggctctgcagacagcctttgtcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctag +aggggttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctcaggaagaggggggagtcaca--------agcctag--t-----------gaaaagaatc-------- +-------act-tta----------------------at-a--------aa-ttct-------------ttt- +--------------aaa----------------------------aaaaaaaaaaaaa-------------- +------------------------------------------------------------------------ +- +>KU561250.1/1-7551 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2013/CAU-55, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaacacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcaggaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatctatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgcagactac +t-cccgctgggactccacacaacagcgggcagtgctggaagtggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattccattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgttccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccaacctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggcgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcactcaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaaatt- +--ggctatt----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561251.1/1-7551 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2013/CAU-85, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgccgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +agggaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactgttgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +accatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtacccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggtacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggagcaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagtggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccattgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggggagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccacaataatgtgttgcaggtgcagtgtca +aaacggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gagaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccctaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaacctcgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatatttcagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ac +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatccgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcacgtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacaggacgttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaaatt- +--ggctatt----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561252.1/1-7556 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2014/CAU-192, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaagcaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttacgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgattttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcatatcttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgtcc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561253.1/1-7556 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2014/CAU-265, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattactggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgtatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcacttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacacgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561254.1/1-7556 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2015/CAU-267, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaagtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccggacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgtcc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcgaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561255.1/1-7556 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2015/CAU-283, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacatccttaatatactggcaacctgcgattg +gacttttgcaggtatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggagactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtagtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaatgttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaactgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaaacagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcctcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aatttt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU561256.1/1-7556 |Norovirus GII.17 strain Hu/GII.P17_GII.17/KR/2015/CAU-289, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacatccttaatatactggcaacctgcgattg +gacttttgcaggtatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggagactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtagtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaatgttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaactgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaaacagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcctcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KU306738.1/1-7233 |Norovirus GII strain Hu/NI/2005/GII.PNA3-GII.NA3/Leon4509 polyprotein gene, partial cds; major capsid protein gene, complete cds; and minor structural protein gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------cgacactcaaatgg------tgaggatatagtaatcaag +tataccaaac----------aagg---ggacacggtcagtggagtgcccaccgtctccactgcagacacatc +ccctctacatgacactgcatacagtgtcccccccctggatcaaagggaaaagacagacgcaaaggaacccct +aaccggctcaataattgaaatgtgggacggtgagatctaccattatgggctctatgtggagagaggattggt +ccttggtgtacataagccaccggcagccgtgagcctcgcgcgcatcgagctgtcccccctttccctatattg +gagaacagtttacacacccc---cttacttggttgctcctgacacccttaagaagctccatggtgaaacctt +cccctacacggcatttgagaacaactgctacacattctgctgttgggttttggacctgaatgattcttggct +caa---cagaaagttcgtgtcgagaaccacaggcttctatagaccctatcaagattggaacagaaaaccatt +gccaaccatggacgaggggaaactcaagaaggtggccaatgtgttcctgtgcgctctgtctgggctgatcac +cagacccatcaaggacctcataggtaaactgaaaccattaaacatcctcaacatcatcgccaattgtgactg +gaccttctctggtgttgtagagtcagtgattctctttgcagaactcttt---ggcatcttttggacaccacc +agatatatcagctttcattgcatccttgttgggtgactatgaaatgcaaggccctgaagacatcgcatccga +gatcgtcccagtcatccttggcggcattggcatggttcttggcttcaccaaagaaagaattggccggttgct +gagctccgcggcatcatcccttagagcatgcagggagatcggcaactacggaatagaagtggtaaaattggt +gatgaaatggttcttcccgaccaaaaatgaagtcaatgaaatggagatggtcagaacaatagaagatgcagt +gcttgacttcgaggcaatacaaaacaaccacatgacagctttgctcaaagacaagaatagtctgaccacctt +tctcagagcattagacttggaagaggaaaaggcgcggaaactgtcaactaaatccgcttcacccgacatagt +cggcaccataaatgcactcttggcgagaatcgccgctgccagatctctagtacacagggctaaggaagagat +gtcatctaggatgcgtcctgttgtcatcatgatatctggacgacctgggatagggaagacccacttggcacg +cgatctggccaaaaagatggcagccactctatcaggtgaccaaagagttggccttgtcccaagaaacggtgt +cgaccactgggacgcatataagggagagaggatcgtcctctgggatgactacggcatgagcaaccccgtgac +agatgccctccggctccaagaactcgccgacacatgccccttaacactcaactgtgatagaatagaaaataa +ggggaaagtctttgacagtgacactctgattatcaccaccaatttgcccaatccggcccccatggactatgt +gaattttgaagcttg-ctcacgccgcatagacttccttgtctacgcggattccccctcagttgacaaggcaa +aaagagactttccgggccaaccggacatgtggaaagacgccttcaaaccagacttctcacatataaagttac +aattggcaccacaaggggggtttgacaagaatggaaacactccgcatggaaagggcgtcatgaagtcactga +ccatacactccctcatagcccgcgccattggcctactccatgagaggttggacgaatttgatctacaaggcc +cagacttgccagtgtacaactttgaccagaacaaggtggccgcattccgaaaactcgcggccgataacaagt +atggactcatggacaccttgagagcaggcaacaaattgaaggaagtcaaaaccctagaacaattcaaggaag +cagtgaaggacatacgaataaaaccctgtaggataatctacaattccctggcctatgacttagattcaaatg +ggtcagggaaagtcaatatcaagaaggtaggggatcagagggtccaagccaacaatgaactcaactctgcgc +tcaacaaactgcgcggggccagaatcagatattacgtgaaatgcttccaagaaatgatctactcaattctcc +agattgccggcgcggcttttgttacatcaaggatggcacaaaggatga------atgtcaacaaaatgtggt +ccaaaccaga------------aaaaca--------aatgggcaccctcacggagccacctgtccctccg-- +--------gatgaag---aatggaccatagtaccggtggacacagtccaggaaggcaagaaaggcaaaaaca +agagtggcagaggcaagaaacacactgctttttctagtaagggccttagtgatgaggaatatgatgagtaca +aaaggatcagagaagaacgccaagggaaatactccatagaagaatacctccaggacagggaccggtat---t +atgaggaattggccatagccaaagcaacagaagaaaacttttgtgaagaggaggaagtcaaaataaggcaga +gaatttttcgcccgaccaagaaacaacgtagggaggagagggcaactttgggtcttgtcacaggtagtgaga +taaggaagaggaaccctgatgatttcaagccaaaaggaaagctgtgggctgatgatgaccgcagtgttaatt +ataatgagagaatagattttgaagcccctcccagtctctggtccagaatagtcaacttcggatcaggctggg +gcttttgggtctcct-ccaacctgttcattacttccacacatgtcatcccaccaaacatgactgaagccttt +ggagtgccaataaaccagatacagatacacaggagtggggagttctgtaagatgagattcccaaaagccatc +agacccgatgtatctggcatgatccttgaagaaggcgcccctgaaggaacggttgtgaccatactgatcaaa +agaacaactggtgaactcatgccattggcagctcgcatgggcacccatgccaccatgaaggtacaaggcaga +atgattggaggccagatgggaatgctcctcacagggtccaatgccaaaaacatggatcttggcaccgtcccc +ggtgattgtggttgcccttacgtttacaagaggggcaatgattgggttaccatcggggtccacactgccgcc +gctaggggcggtaacacggtgatctgtgctacccagggaccagatggtgaagctacccttgaggggggagaa +aaccatggaacatactgtggtgcgcccatattaggaccagggagcgccccaaagctcagcaccaagactaaa +ttctggagatcttccaatgtctcacttccccctggcacatatgaacctgcctatctgggtggtaaagaccca +agggttaagggcggcccatccctgcaacaggtcatgagggaacaactcaaacctttcactgcccctcgcggg +aaaccgccgaaaccagcggttttggaggccgcaaaggaaaccatttgtaatgtattggaacaaaccattgaa +ccaccccagaagtggtcctacgcgcaagcctgcgcatccctagacaaaacaacttcaagtggtcacccccat +cacaagaagaaaaatgacaattggaatggtgaatcttttactggtgttctggccgatcaggcgtcaaaggcc +aacctcatgttcgagcaaggaaaacacatgcagcctgtgtatacaggagcactcaaagatgaacttgtcaag +accagcaaaatttatgagaacattaaaaagaggcttctgtggggttcagacctgggtacgatgatacgctgt +gccaggtcattcggtggtctcatggatgagatgaaggcaaactgcgtgaatctaccagtcagggttggcatg +aacatgaatgaggatgggcccataatctttgaaaaacattcaaaatacaggtaccattatgatgctgactat +t-ccaggtgggattcaacacaacaaaggtgtgtcttgggtgctgcacttgaaattatgg-tcaggttctcag +ccgaacctgaatt-ggcacaaattgtggctgaggacctcttgtcacccagcgtcatggacgttggcgacttc +aaaatcaccataaacgagggtttgccctctggggtcccgtgcacatctcaatggaattcaattactcattgg +ctactaacattgtgtgccttgtcagaagtctcagggctgtcaccagatgtggtacaatcaaactcatgcttc +tccttttacggggatgatgagatagttagcacagacattaaattggatccccagaaattaacagacaaacta +agagaatatggcttgatcccaaccagacctgacaagacagaaggccctctcataatcaaggaaagcttggag +ggcctaaccttcctgagaagggatgtgtgcagagacccagttggatggtatggcaagcttgaccaatcatca +atcatgaggcaactatattggaccaaaggacccaaccatgaagaccccagcgaaacgatgatcccacactct +cagagacctgtgcaattgatgtccctgcttggtgaagcagccctacatggaccagcattctacaaaaaggtt +agcaaattggtcatcactgaactcaaagaaggtggaatggatttctatgtacccaggcaagaacccatgttt +aggtggatgagattctctgatctgagcacgtgggagggcgatcgcaatctggctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcatccagtctcgtaccagagatcaacaacga +gacaatggctttggaaccggtggcgggaggagctatcgcagccccccttaccgggcagacaaattttattga +tccctggattagaaataattatgtgcaagcacccaatggtgagtttacaatatcccctagaaattctcctgg +tgaaattttacttaatttggaattgggccctgaacttaacccattcttagcccacctggccagaatgtacaa +tgggtatgctggaggtgttgatgtccaggtcatcatggcaggcaatgccttcactgc---cggtaaagtcat +ctttgctgcagtgccaccccacttcccagttgagagtcttagccccccccaaattactatgtttccccatat +tatagtggatgtcagaacccttgaacctataaacatccccatacctgatgttaggaacaatttcttccatta +caatcagaacaatgag---ccccgtatgaggttggtagccatgttgtacaccccccttagatcaaatggttc +tgctgatgatgttttcacagtgtcatgcagggttctaacaaagccttcagcagattttgagttcaattattt +ggtccccccgacagtcgaatcaagaactaaacccttcacaataccaatactcacaattggagagatgacaaa +ttcaaga---ttccctgtggccattgacatgctgtacaccagcccaactgaaaacctggtggtccaacccca +gaatggcaggtgtacacttgagggtgagttattaggcacaacacagttggtgactccaaacatctgctccct +ccgtg-----------------------------------------gtgcaatcactg-------------- +------------gacatgaggg--------------------------------------------ca---- +----atgatgaca----------------------------------atcacaag----------------- +----------tggcacatgacggtcacaaaccccaatggctccgcttttgatccaacagaagatgtgcctgc +tcccctaggcaccccagacttcataggtgatgtgtacggagtgctctcccaaa---ggaatagaaa---cat +agaatct-----ggccaaactgctcccgcaaac--------agg-----------tcccatgaagctgttat +ttccacaaggagcaacaaattcacaccaaaattgggctcagtaatgattgcca---------cttggaacac +taatgatgt---tga---aaaccaacccacca---------------------------aattcacaccag- +--------tagga------cttgaaaatcctg------------gttctttccaccagtgggagttgccaaa +ttactcaggagct-ttaacc------ctcaacatggggcttgcaccacctgtgttcccaacctaccccggcg +agcagcttctcttcttccgctcgtacatccccc------ttaagggtgggtt------tggga--------- +--attcaataatagattgtcttgtgccacaagagtggattcaacatttctatcaagaatcagccccctcaca +aacagatgtggctttaatcaggtatgtcaaccccgaaacaggacgcgtccttttcgaggccaaattgcacag +acaagggttcatcaccgtcgccaagactggtgacagccccatcaatgtacctgccaatggctattttagatt +tgactcttgggttaattcattttattcacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------agtaatggcaggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttagttcagg---tgctaatgctatcaatcagaaaattgattttgaaaataataagtat--- +------------------------------ttacaaaatgcatcttttaatcatgataaggaaatgttgcaa +gcacaggttcaggcaacaaaacaactgcaggctgacatgattgccatcaagcaaggggttctgaccgctggc +ggcttttcccctactgatgcggcacgcggggcaatcaacgcccccatgacaaaagtcttggattggagtgga +acaaggtactgggcaccaaacgccactgccacaacctcaatgtcaggtggctttacagga------------ +ca-----------agttgtgcaccggaccacaccagat---------------------------------t +ttaaaac----------------aagccaggcccccaagtctgta--------------------------- +-------------------------------------------------ccc---------------agtag +tgggtcct-----------caatc------------agatcaaactcaacccaactcaccagt--------- +----------ctaggc-------tcacattc------atccgggtcgtctcgatccagtgggtccacagtta +ctagttccc------tac--------------------------------cat------------------c +ttccag---------------------------------------taggactagggaatgggtcaagcaaca +aagtctcaatttggaaccacatatgc---ctgggtctcacagaatagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aggtgttttgga-ctcctggtcacctgcgt------------ttaacacacgcagacagccgctcttcgcgt +accttcatagaaggggg------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972465.1/1-7509 |Norovirus Hu/GII.4/Hokkaido1/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggcc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgagctagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcagcc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctatatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgactccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgcttaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggttgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagcccttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tacatcacctaaggtgcgccagaattaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaagcaacgcaaggaagaaagggcttctctcggtttggtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaagctatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtaac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctgatggatgaactcaaagcacactgtatcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaattatgg-ttagattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctc +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcgctccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttaggccctgatctgaatccctacctatctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtaccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccattatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagctca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggcccataccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctatacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaggagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtattgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccagaactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------aa +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972466.1/1-7509 |Norovirus Hu/GII.4/Hokkaido4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaaagaggtcttat +acttggagtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgattgacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagatcct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaatcatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaattttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagacgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgt-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972467.1/1-7509 |Norovirus Hu/GII.4/Aomori2/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgaaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgatccagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatcctcaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccagatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggacgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactccctcttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgattccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggatc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972468.1/1-7509 |Norovirus Hu/GII.4/Aomori3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaatatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagactaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaag-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacaccc +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagctctagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---tccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgttccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccagaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaacgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972469.1/1-7509 |Norovirus Hu/GII.4/Aomori5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaagtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggttataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaaccgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcaccct +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972470.1/1-7509 |Norovirus Hu/GII.4/Akita4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtgacacctacacacttgaggctgatg +gcaaaggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggacccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972471.1/1-7509 |Norovirus Hu/GII.4/Akita5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacctaacgg------agaggatgagctagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcagcc +ggaagaaactaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctatatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgactccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggagttggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcggt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgcttaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggttgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagcccttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tacatcacctaaggtgcgccagaattaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaagcaacgcaaggaagaaagggcttctctcggtttggtcacaggtactgaaa +ttaggaaaaggaacccagaggacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtaac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctgatggatgaactcaaagcacactgtatcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaattatgg-ttagattctcct +cagaaccacattt-ggctcaggtggtggcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctc +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttggat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcgctccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggtaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccattatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggcccataccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctatacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaggagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtattgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccagaactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972472.1/1-7452 |Norovirus Hu/GII.4/Iwate4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtctccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caaccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgacga---------------------------------------------------------tga +cactcaagaacgtcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaag-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagtcctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaacgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972473.1/1-7509 |Norovirus Hu/GII.4/Iwate5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaaattacatggagagacatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacctattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggaaaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttttggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcactaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgatatgtggaagaacgctttcagttctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatattgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatggtacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagtcctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagacggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972474.1/1-7509 |Norovirus Hu/GII.4/Miyagi3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgagctagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcagcc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctatatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgactccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgcttaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggttgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagcccttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tacatcacctaaggtgcgccagaattaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaagcaacgcaaggaagaaagggcttctctcggtttggtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtaac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctgatggatgaactcaaagcacactgtatcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaattatgg-ttagattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctc +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcgctccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccattatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggcccataccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctatacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaggcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaggagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtattgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccagaactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972475.1/1-7509 |Norovirus Hu/GII.4/Saitama2/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgagctagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +tgaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaagtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgtccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaactgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ctagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgataaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttttactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972476.1/1-7509 |Norovirus Hu/GII.4/Toyama2/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaactagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagagctcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccggcaccactggactatgt +taactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tgcatcacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcctctctcggtttagtcacaggtgctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggaatccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactacttatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtggaggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcagggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccgcctgagaagtggtcgttcgcacgagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgaaaccaactcgccctgataagactgaaggacctcttgttatctctgaagatttagat +ggtttgaccttcctgcggagaaccgtgacccgcgatccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcactacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagacttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacagtgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagattcgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggggctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgc-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgcctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatctgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972477.1/1-7476 |Norovirus Hu/GII.4/Niigata4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccgggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgac-------------------------------gatgacaaga--atgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcggggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972478.1/1-7509 |Norovirus Hu/GII.4/Fukui3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagagaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgcgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcctgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtatgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggacgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatggagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccaactga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcaccagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tatagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972479.1/1-7509 |Norovirus Hu/GII.4/Fukui4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagaccagtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcgtccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactttcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaattagccggtgccc +tacaccacctaaggtgcgctaggatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaatgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactttctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggccccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972480.1/1-7509 |Norovirus Hu/GII.4/Fukui6/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacctaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcgtcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtggatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972481.1/1-7509 |Norovirus Hu/GII.4/Fukui7/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972482.1/1-7509 |Norovirus Hu/GII.4/Fukui8/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgagctgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacgatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatgggatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaaacacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttatcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972483.1/1-7509 |Norovirus Hu/GII.4/Ehime5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgagaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacactaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggagtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgacgatgacagagagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtacaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccgatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccaaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcattatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgactt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttatttcaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972484.1/1-7509 |Norovirus Hu/GII.4/OsakaCity1/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacagaaaacccct +ccccactatggatgattccaaactaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgactg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcggt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaattaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttacaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atggactgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtatgatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggctgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactctatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaggccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacgacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggctttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggttggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggacttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagtcgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-gatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccagacacaggtagggttttgttcgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +caaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaagca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972485.1/1-7509 |Norovirus Hu/GII.4/OsakaCity2/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagcggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagcgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaagcaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcaccatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgccttcgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagagatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggagttcctcc------------------ag +taagtatt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972486.1/1-7509 |Norovirus Hu/GII.4/OsakaCity4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaattagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatccctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtggtcttgatgatatcaggtagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcttccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaatccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccgtgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagattacttctattcagaccaacaatgagctggctggcgccc +tgcatcacctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agatcgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggttgccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +gaatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtgctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagagggaatgactatgttgttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaatggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggcaggatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttggat +ggtttgaccttcctgcggagaaccgtgacccgtgacccggctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgtttccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttaccacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctttaaattggaacaactatgacccaacagaagaaattccagc +ccctctagggactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgcaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccaccccc--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +catacctt-----------ctaat------------gtttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgcctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972487.1/1-7509 |Norovirus Hu/GII.4/Sakai1/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggattggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaag-- +-gat----gatggag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaggggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccatttacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttgtctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaacgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972488.1/1-7509 |Norovirus Hu/GII.4/Sakai2/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagcgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgttacgccttttgttgttgggtattagacctaaacgactcatggct +gag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagactaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaag-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatcttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaacccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaaccccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgttccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaacgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972489.1/1-7509 |Norovirus Hu/GII.4/Sakai3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aatagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactacctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctccttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcgtggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ttccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +ggggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcttctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcgaatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctacggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcagaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagttgctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccattaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ccaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972490.1/1-7509 |Norovirus Hu/GII.4/Sakai4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaacaccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattacgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaagcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttagacccagaaaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972491.1/1-7509 |Norovirus Hu/GII.4/Sakai5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccacttaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacagggtccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggacccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcatccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972492.1/1-7509 |Norovirus Hu/GII.4/Shimane3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttgt +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatatttttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacgcagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgaataca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtatcaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcagagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accaccgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972493.1/1-7509 |Norovirus Hu/GII.4/Shimane5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcggccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctagccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccgcagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggtgacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcatacctcaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccagaggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgccccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggaactttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatggaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972494.1/1-7509 |Norovirus Hu/GII.4/Hiroshima4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacttaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccaactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ctaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtcta-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972495.1/1-7509 |Norovirus Hu/GII.4/Hiroshima5/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacgccagaattggta-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaataagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctccctcaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972496.1/1-7509 |Norovirus Hu/GII.4/HiroshimaCity3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggaggtcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972497.1/1-7509 |Norovirus Hu/GII.4/HiroshimaCity4/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggagataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactacaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtgacacctacacacttgaggctgatg +gcaaaggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccgaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaaggggtgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggacccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972498.1/1-7509 |Norovirus Hu/GII.4/Ehime3/2012/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacgtaatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaacccaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttagaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtacaaagtaccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacctagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggagaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgttagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatggagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttctacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttagctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggaattggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctctctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972499.1/1-7509 |Norovirus Hu/GII.4/GII4-HK01/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgttaggattcaccaaagagaaaattggaaaaatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgattatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccaccggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaggcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgat +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacccggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaggccgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagctttcggaggccttatggatgaactcaaggcacattgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacagcaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacattt-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttc +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaaccgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacctatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatctaaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacacg----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagattttgtggggaaaattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972500.1/1-7509 |Norovirus Hu/GII.4/GII4-HK02/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtacatcgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccagggatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccccattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctctcttatcgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttcggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaagggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacagctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcactactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgcttacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccctactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggagcacc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +aaaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcaacctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972501.1/1-7509 |Norovirus Hu/GII.4/GII4-HK03/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagctagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaagcacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggtgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaatgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcatcggggtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +ttttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +accaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagggccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972502.1/1-7509 |Norovirus Hu/GII.4/GII4-NG1242/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972503.1/1-7509 |Norovirus Hu/GII.4/GII4-NG1315/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgatgatggctccatcagctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tgaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagacgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972504.1/1-7509 |Norovirus Hu/GII.4/GII4-NG1343/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagcttaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgccccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-tgaagttctctc +cagaaccatacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagtcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagacgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaaccccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB972505.1/1-7509 |Norovirus Hu/GII.4/GII4-NG1365/2011/JP RNA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattagtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtagtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacgttctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +ttaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggctccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagtaccgcccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacgacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU311158.1/1-7525 |Norovirus Hu/GII.4/AlbertaEI350/2014/CA isolate OU2 non-structural polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +--------------------gcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtagaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtccctatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcgggaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagatagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaaaggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccggcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaatgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttaggcagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacagtggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatgattgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgacgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctatttataacatcaacccatgtcataccccaaggtgcaaaagagtttttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcacccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggcgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagcttagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccattatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacgggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +actgataaagtttatggcaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctggcagcagcactagaaatcatgg-ttaagttctccc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaagggccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgttgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgttaacatctgcacctt +tagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagcaaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgagccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccactttcccgggtg +agcaacttctcttctttagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccctaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---agctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttccccc------------------ag +taagtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------gaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttctcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgctc +acattcgtacgcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU311162.1/1-7524 |Norovirus Hu/GII.4/AlbertaSP1/2012/CA isolate SP1 non-structural polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagcgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtctcgt +gctgggcgtacacaaaccaccagctgccattagcttcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctacgccttttgttgttgggtcttggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgattttgagttacaagggcctgaagaccttgtagtgga +actcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccactctgagagcttgtaaagaccttggtgcatatgggctagaaatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagactaagacctgtagtcttgatgatatcaggcaagccaggaatagggaagacctactttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtataggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcta +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +aacgcgacttcccgggccaacctgacatgtggaaaaacgcatttagttctgacttctcacacataaaactgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactagctctctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacaatggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagcacttccgttcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgccggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggtaaaaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaagagaaatccagaagacttcaagcccaagggaaaactatgggctgacgatgacaggagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggggtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatttaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaactcagcaccaaaaccaaa +tactggagatcatccacagcaccacttccacctggcacctacgaaccagcctaccttggtggtaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagatcaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggccttatggatgaactcaaagcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaaacattccaggtatagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcgatcaacgagggccttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgctgcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaaagat---tctaccattaaattgatagcaatgctgtacacaccactcagggccaataatgc +cggggatgacgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcaatgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtactcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaaa----------- +-----------ttgcgag------------------------------------------------ta---- +-------cccaaa----------------------------------cttacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggagctccagacttcatgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggcaaggtggctcgacc--------cgg-----------ggccataaagctacagt +ttccactgggagtgtccacttcactccaaagctgggcagtgttcgatttgaca---------ctgatacaaa +caatgacct---tcaacctcatcaaagcacaa---------------------------gatttaccccag- +--------tcggcgtcatccaggatggtga---cacccaccaaaatgaaccccaacaatgggcgctcccatg +ttattcaggtaga-gatgtc------aacaatgtacacctagcccctgctgtagcccccagttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacataatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctctctttgctggattggcttctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagagaattg +cagcaagcttcctttcagtttagtagcaatctacaacaagcttcctttcaacatgataaagagatgctccat +gcacaaattgaggccactaaaaagttgcaacaggaattgatgaaggtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgactaaggctttggactggagtgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------a +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tatccccgcccggggctcccca------------------ag +tatatctt-----------ccaat------------gtttcttctgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcgcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-c-tgat-----ta-----t------ct------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KU311163.1/1-7535 |Norovirus Hu/GII.4/AlbertaSP1/2013/CA isolate SP2 non-structural polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagcgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtctcgt +gctgggcgtacacaaaccaccagctgccattagcttcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctacgccttttgttgttgggtcttggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgattttgagttacaagggcctgaagaccttgtagtgga +actcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccactctgagagcttgtaaagaccttggtgcatatgggctagaaatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagactaagacctgtagtcttgatgatatcaggcaagccaggaatagggaagacctactttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtataggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcta +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +aacgcgacttcccgggccaacctgacatgtggaaaaacgcatttagttctgacttctcacacataaaactgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactagctctctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaaattgggaagcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacaatggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagcacttccgttcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgccggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggtaaaaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaagagaaatccagaagacttcaagcccaagggaaaactatgggctgacgatgacaggagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggggtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatttaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaactcagcaccaaaaccaaa +tactggagatcatccacagcaccacttccacctggcacctacgaaccagcctaccttggtggtaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacgatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagatcaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggccttatggatgaactcaaagcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaaacattccaggtatagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcgatcaacgagggccttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgctgcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaaagat---tctaccattaaattgatagcaatgctgtacacaccactcagggccaataatgc +cggggatgacgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcaatgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtactcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaaa----------- +-----------ttgcgag------------------------------------------------ta---- +-------cccaaa----------------------------------cttacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggagctccagacttcatgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggcaagatggctcgacc--------cgg-----------ggccataaagctacagt +ttccactgggagtgtccacttcactccaaagctgggcagtgttcgatttgaca---------ctgatacaaa +caataacct---tcaacctcatcaaagcacaa---------------------------gatttaccccag- +--------tcggcgtcatccaggatggtga---cacccaccaaaatgaaccccaacaatgggtgctcccatg +ttattcaggtaga-gatgtc------aacaatgtacacctagcccctgctgtagcccccagttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacataatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctctctttgctggattggcttctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagagaattg +cagcaagcttcctttcagtttagtagcaatctacaacaagcttcctttcaacatgataaagagatgctccat +gcacaaattgaggccactaaaaagttgcaacaggaattgatgaaggtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgactaaggctttggactggagtgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------a +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccca------------------ag +tatacctt-----------ccaat------------gtttcttctgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcgcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-c-tgat-----ta-----t------ctttc----------t-ct----t--------tctt-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT380915.1/1-7569 |Norovirus GII.17 strain Hu/GII.17/142700/Shanghai/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcaggcagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacatacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggcacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcaattgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatcttttgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaacctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaa------------------- +------------------------------------------------------------------------ +- +>KT326180.1/1-7507 |Norovirus Hu/GII.17/CUHK-NS-405/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +------------------------------------------------------------------------ +--------------acgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagccgacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctataagggagaaagggtggtcctgtgggacgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT326181.1/1-7518 |Norovirus Hu/GII.17/CUHK-NS-649/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------------------------------------------------------------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggacgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggcacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatattggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaatgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctaggaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaatttgagctccaaggtt +ctgacttgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctacaccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacacaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactccagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcagaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactggggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggaaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaactcaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctgtcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaactgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gaccctccccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggtcctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccacttcctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttctccttacccattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaactcagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaatctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacttatagcccccaatttgtccccaaattaggttctgttaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaaccttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggatacttcagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctctcttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagttccctcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT326182.1/1-7506 |Norovirus Hu/GII.17/CUHK-NS-667/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +------------------------------------------------------------------------ +---------------cgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaaaaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgtaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaaatggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcatcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggacgcacctataccatggaatctgatg +ggaggggtaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaatcgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtata +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcctataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaagaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aataagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggcgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacagcagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ccgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggcctcaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaattcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcccgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacagtgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcaggtctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +gtctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttaggtt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcattcaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780394.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-469/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------atccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaggaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacctcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctgggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgaaaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcgggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactaccctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------catactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780395.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-482/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tct-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggcaggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggttcccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggttcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaagagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacattatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcgggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +atcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780396.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-492/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattagt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttagaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggttacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtgtacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacagtggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccataataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttcttctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaactgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780397.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-494/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgccaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gactttcgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaatcttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaaaaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatgggtgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccacttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggccattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagagga +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaatcagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttgttcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaatcccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taaactc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780398.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-500/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctggcttgccaaccttcaatttcgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccacttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgtatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccaggaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttgcaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacgcctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaaccttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgcacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780399.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-502/HKG/2014 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaatc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattattacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacacggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtacaatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-aat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcacggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtccctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780400.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-511/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcctgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacta +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatacttaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggagactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggtgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggaagagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcgacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagaaaaattgaccacaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagctacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggactggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---caat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780401.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-517/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacacggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtacaatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctgttctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctatcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +gggtcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaaccgcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780402.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-549/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacctttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacta +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcctccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctggcctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780403.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-574/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgtcccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgtaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggcc-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780404.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-582/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaacatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacacaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggaaaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacctactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgcgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780405.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-599/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tggcgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagatctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctaa +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaactttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatattatgttaaatgtttccaagaggccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggtaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacctcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgaaaaacactccaggtacaggtaccattatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaaccaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggtacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcgggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------catactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780406.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-600/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaattgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacaaatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttgtaacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgccacttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcctcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ctcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaaccttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggaa-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtgtctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttccctcactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaggacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780407.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-603/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgctaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggagggtgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatttaagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggcc-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780408.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-627/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgctgt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +agggaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggcgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcggcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagcttgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctattagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaagtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgttccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcagctgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggcacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttcctgctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaatttacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780409.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-636/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aaaagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttacagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattgggaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtaaaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggttacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcactcgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaattaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacatcactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcgctcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcttttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtccctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780410.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-637/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacaggaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtgcaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagctcgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgtgtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaactgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagagtatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agtaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaggagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaattgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaacgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtaaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780411.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-643/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgctatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ttctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctatgccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaggcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcat +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtggttagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttacttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgcacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcgggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cctctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780412.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-647/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aaaagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccgcttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccagaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaggtac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattatgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccaagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggttacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactactgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatctggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctacttctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgactcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcttttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttctcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780413.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-653/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgata---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagctttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaagccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctagatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctatgccatggaatctgatg +gggggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacctatcgaggagggtgatga--------gcctgaagacagaggaggatgccctaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaggaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccaagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaactgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +gatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggtatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggaacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccgt------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcgcgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagttttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780414.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-655/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agacgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaggaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatgggaactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttccttcgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggcc-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780415.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-656/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaatgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtcttatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatctgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatccttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT780416.1/1-7559 |Norovirus Hu/GII.17/CUHK-NS-657/HKG/2015 nonstructural polyprotein (ORF1) gene, partial cds; and viral protein 1 (VP1) and viral protein 2 (VP2) genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggctacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtatatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaagattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaaggaaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcctagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcataggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggaaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcctgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaaccttaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------agtgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaggcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggcc-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagcag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------agt-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KT992785.1/1-7498 |Norovirus Hu/GII.17/HN01/Nanyang/CHN/2015, partial genome +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataatccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgatcagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT992786.1/1-7499 |Norovirus Hu/GII.17/HN02/Nanyang/CHN/2015, partial genome +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgatcagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcakggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT992787.1/1-7499 |Norovirus Hu/GII.17/HN03/Nanyang/CHN/2015, partial genome +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaaatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT992788.1/1-7498 |Norovirus Hu/GII.17/HN04/Nanyang/CHN/2015, partial genome +-----tgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataatccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgatcagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT992789.1/1-7501 |Norovirus Hu/GII.17/HN05/Nanyang/CHN/2015, partial genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatcctygatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaaatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaga------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT992790.1/1-7548 |Norovirus Hu/GII.17/HNkaohao/Nanyang/CHN/2015, partial genome +----ttgaatgaagaa---tgcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcaaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaggcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccccggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacaaatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaattactgatgccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +agaacaacaggggagctgatgcctcttgcagtcaggatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagcg +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggcatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaataacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttaccgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttaca------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtag---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcgcttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaa--------------------agaa---------------------------------------- +------------------------------------------------------------------------ +- +>KT202793.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2013-L10/CHN/2013, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtgatc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----ct-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT202794.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L106/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagcgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatactcgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttttgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cccaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctctttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgactcctgggttaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctagtcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT202795.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L122/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtgatc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggggtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----ct-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatatt------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT202796.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L132/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggccacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggcgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaagaaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgaaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcgggtgaattctgccggttgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagagggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcat +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggcgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatttggcccccgctgtagcccccacttttccgggtg +agcaacttctttttttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgcctgctcccccaggaatgggtgcagtacttctaccaagacgcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT202797.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L295/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggaggttacatggagagtcatt +cccctacactgcatttgataacaattgctacgccttttgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttatcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagcccccaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaaat +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtaccactgtgcagaccaacaatgaactagctggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcattgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gacggccaacaaagatggttgcctaaagcccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtttccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcagatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggggtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agcaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaagtaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacagggaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtatagataccactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgcgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggaacccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-agtact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccactcct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctactcggggttcctcc------------------ag +caagcctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT202798.1/1-7513 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L307/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagaatcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggactggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggccacatgtgattg +gaccttcgcaggtatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagacccacctcgccag +ggagctggccaaaaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgcccttaggttgcaggagcttgctgacacttgtcccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggtaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcattgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgccgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtactccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaagaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgaaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgtcgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaagattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagagggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggaatgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcgccaatcttgggcccagggagtgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggtaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccgaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcat +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgacaaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacgcaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggcgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgaaattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaacccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaattagaacctgtgttgattcccttacccgacgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgctgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagaaggt +gggttttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +taagtctt-----------ctaat------------tcttccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970370.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2014-L313/CHN/2014, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +gccaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacattgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagctaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagcctttgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggatcagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtagaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcaagg---ttcccagtccccatcgattcgcttttcaccgcccagaataacgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970371.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L324/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagttggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgtagttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttttcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgtcaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +gggggggcaaggttgtggttgaaaaggtacaaaacgcaacagtccaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagagacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcactatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagarccagttgcgggygcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaacacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcccactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgcacactgtttgaagcaaaattgcacag +gtctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgaytcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcctcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970372.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L325/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagttggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgtagttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttttcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgtcaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +gggggggcaaggttgtggttgaaaaggtacaaaacgcaacagtccaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagagacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgactttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcactatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agtcgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattctttagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcctcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcaaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970373.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L337/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaagg----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtgcctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccattagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggcgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atagtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagcctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagcggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagctcagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaattgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970374.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L339/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cggagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagattaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgataacaggagcgtggatt +acaatgagaggatagattttgaagctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctactgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgctccccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaattaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgacgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggggactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970375.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L340/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcactttaaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggacgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccaccctcctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaactaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactatcgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaaaccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggtaacgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagattcagcaaagaagactatcatcaatgttatggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaggcttgtgcatccctcgacaagacaacctctagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactctacacagcagcgggcagtgctggaagcggcacttgaaatcatgg-tgaggttttctg +ctgagccgcagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctatgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagarccagttgcgggtgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaagtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcaggtctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970376.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L343/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgtgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggcacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattggcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatgg--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgttacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatgtacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccccgatttgaacccttatttggctcatttatcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtttttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattgtagattgtctcattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgtagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT970377.1/1-7495 |Norovirus GII isolate Hu/Guangzhou/GZ2015-L362/CHN/2015, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggatttaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaggttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtgcaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactgctaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaggagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagctcagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaat---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaattgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacatttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aattaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KR154230.1/1-7552 |Norovirus Hu/GII.17/CGMH69/2015/TW nonstructural polyprotein (ORF1), capsid protein (VP1), and minor capsid protein (VP2) genes, complete cds +--------------at---ggtgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgcttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagagtacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttggccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattttggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtacttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccacctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgccctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgcgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtctctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcacgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgctcctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggtggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccactttgggacctggcaatgcaccaaaattaagtacaaagacaaag +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccccatcagagttggtatg +aatatgaacgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagagattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgagccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagcaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggcacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---tcaatt---ccagccgacga---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctactcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggattcaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcattctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---agcaaacgccatcaaccaaaagatagactttgaaaacaacgaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagctctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggcgccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaaacctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------cg-------tatactcaatctgctcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagttt--------------------------------------tggctcct------------------c +tttaaa---------------------------------------cagaacagcagagggggtaaatcaaca +gag---aagttttagccctttcatga---ggggggcacttagcatttcccatgtccccccccccccaagtag +ggcttcc---agtt------------------------------ttggga---cggtttcgcccgtgcccaa +ggaagttttgga-ctcctggacgtttgcgt------------ttaacacacacagacagccgcttttccccc +ccctcagagtgaggggggggtcccg--------tgtttag--t-----------gaaaaaaaaa-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggttaat----ttgt---gttttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KR154231.1/1-7551 |Norovirus Hu/GII.17/CGMH70/2015/TW nonstructural polyprotein (ORF1), capsid protein (VP1), and minor capsid protein (VP2) genes, complete cds +--------------at---ggtgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgcttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagagtacc +tcc-----------------------------acccccacctaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttggccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattttggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtacttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttaccaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgattcttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +tatgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +taactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctaa +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaagt +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggaaaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaagggaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggtcagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaagaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccacttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgtgtgaagggaggcccatctctgcaacaagtcatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtatcacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagagtcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacgacga +gacccttcccctagaaccagttgcgggcgcagccatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagacgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccattg +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtaccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagga---------ttagtgataa +tgatgattt---ccaatt---ccagccgacac---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctctcgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctaaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcggcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cgc----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtttcagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ttggga---cggtttcgaccgtgcccaa +ggaagttttgga-ctcctggacgtttgcgt------------ttaacacacacagacagccgcttttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------tt-aaattt- +--ggctaat----ttgt---gttttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>AB665364.1/1-7542 |Norovirus Hu/GII.4/Osaka/NV2210/2007/JP genes for nonstructural polyprotein, capsid protein, minor capsid protein, partial and complete cds +-------------------------taac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaatatgaccccagtctacacaggtgcacttaaagatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgagctcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagtaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaatgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgccgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KT253245.1/1-7557 |Norovirus Hu/GII.17/CHN/2015/ZHITHC-12, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggagtccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccatggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgttacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcagaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtatttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtc +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttactt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgatttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagattatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaagtcaaca +gag---aagtcttagccctttcatga---atggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----tgga---aacctttt-------------------------------------------- +------------------------------------------------------------------------ +- +>KT589391.1/1-7550 |Norovirus GII/Hu/HKG/2015/GII.Pe_GII.17/CUHK-NS-682, complete genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgatg---------------gtgtgctctctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacggccacccacaccagagttggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcctatagcg----------ccaa---agatggtgtttccggactgcctgagctcaccactgtcagacaacc +ggatgaaattaacacggcgttcagtgttcccccgctcaaccaaagggagaacagggacgccaaggaaccatt +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcataagccaccggcggccatcagccttgccaaagtcgagctaacaccactctctctgttctg +gagacctgtatacacacccc---agtatctcatctctccagacactctcaggagactacatggggagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcagaccataccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataataggaaagctgaaaccccttaacatccttaacattctggctacgtgtgattg +gaccttcgcaggcgtagtggaatccttgatactcttggcagagctcttt---ggagtttactggacaccccc +agatgtgtctgcgatgatcgcccccttactaggagattatgaattgcaaggacctgaggaccttgcagtaga +actggtcccagtggtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatctactttgagagcttgtaaagaccttggtgcatacggactggaaattttaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagctagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaacgcccttctggcaagaatcgctgccgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcggggaaaccagggataggaaaaactcaccttgccag +ggagttggccaagaagatcgcagcctccctcacaggggaccagcgtgtgggccttatcccgcgcaatggtgt +tgaccactgggacgcatacaagggtgaaagagtagtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcagattgcaggaacttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caacttcgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctccggaggtggaaagggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggtgtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggctactccatgagagactagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgatcgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggatacaatgagagttggaaaacagctcaaggatgtcaagactatgccagacctcaaacaag +cactcaagaatgtcgcgatcaggaagtgtcagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaaattgacaaagtgcaaagtgctgctgtgcaaactaacaatgaaatagccggcgccc +tacaccacctaaggtgcgccagaatcagatactatgttaagtgtgtccaggaggcactgtattccatcattc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacatagaaga--------gacggccagcaaagatggttgcccaaaacccaaa-- +-gaa----gatgaag---agtttgttgtttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtctggtcgtggcaagaagcacacagccttctcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtattccatagaagagtacctacaggacagagacaagtac---t +atgaggaggtggctattgccagggcaaccgaagaagacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaagcaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +ttaggaagagaaacccagaagactttaagcccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccgccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctattcataacatcaacccatgtcataccccagggtgcaaaagagttcttc +ggagtctctatcaaacaaatccagatacacaaatcaggtgaattctgtcgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaagggaccgtggccacactactcatcaag +agaccaactggagagctcatgcctctggcagccagaatgggaacccatgcaaccatgaagattcaggggcgc +acagttggaggacaaatgggtatgctcctgacaggatccaacgccaagagcatggacctaggcacaacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactacgtggtcataggggtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgaa +aacaaaggaacatactgcggtgcaccaatcttgggcccagggagtgctccaaaactcagcaccaagactaag +ttttggagatcatccacaacaccactcccgcctggtacctacgaaccagcctacctcggcggcaaagatccc +agagtcaaaggtggtccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggt +aaaccaccaaaaccaaatgtgttggaagctgccaagaaaaccatcatcaacgttcttgagcaaacaattgac +ccacctcaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccatccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaagattggcagatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacttggcgaccatgatacggtgc +gcccgagcttttggaggtcttatggatgaactcaaggcacactgtgtcacccttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctggcagcagcactagaaattatgg-ttaaattctctc +cagaaccacacct-ggctcaggtagttgcagaagacctcctctcccccagtgtaatggatgtaggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccagtggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaactcccttttc +tccttctatggtgatgatgagattgtgagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgtcccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccagcattttacagcaaaatt +agtaaattggtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccacgggcctcgtcccagaggtcaacaacga +gacccttcctctggaaccggtagcgggtgcagctattgccgcgcctgttactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggggagttcacagtctcacccagaaactctcctgg +agaaattcttctaaatttggaattgggtcctgatttaaatccatatctggcacatttatctagaatgtataa +tgggtacgctggtggcgtagaagttcaagtcctccttgcagggaatgcgttcactgc---aggaaagattct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacattt +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgttaggaacaccttcttccatta +caataatcaacctacc---aatcgcatgcgattggtagccatgttgtacacccccctgagatctaatggttc +tggtgatgatgttttcacagtgtcatgtagagtgctaactagacccaccccagattttgagttcacatattt +ggtccccccttcggtagagtctaagactaaacccttttctctgcccatactaaccatctctgaattgaccaa +ttcaaga---tttcctgtaccggtggattcattgttcacagcccaaaacaataatcttaatgttcaatgtca +aaatggtcgctgcacattagatggtgagttgcagggaaccactcagttgcaaccatcaggcatctgcgcctt +tagag-----------------------------------------gcaaaataacggcagatgtac----- +----gtccaaaccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcat----------------- +----------------atgcaattgacaaacctcaatggaacccccttcgacccaacagaggatgtgccagc +tccactgggcaccccagatttcacaggccttctcttcggagtggcaagccaaa---gaaatg---------- +-----tt-----caacctaacccaaacaccacc--------agg-----------gcacatgaagccgtgat +atccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gcacaag +tgaagattt---cattgtgggccagcccacaa---------------------------aatttacaccag- +--------ttggcatc---aagattgaggatggac---------atgcatttgatcaatggaccctacccag +gtattcaggccat-ttaact------ctcaatatgaatcttgccccacctgttgctccaaatttccctggtg +aacaattactcttctttaggtcaaatgtcccct------gtgccggcggcat------tagcg--------- +--atggtgtcatcgattgcttgttgcctcaggagtggatacagcacttctaccaggagtctgctccctccca +gtccgatgtggccctgatcagatacgtcaaccccgacacgggccgcacacttttcgaggcgaaactccatag +aacaggctacatcactgttgctcattcaggtgattatccccttgttgtcccctccaatggatactttagatt +tgattcttgggtgaaccaattttactcacttgcccccatgggaaccgggaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagcttttatagcaggtctagcaggtgacatgctcaccaacacagtt +ggctcattggcgaacgccgg---ggccaatgccatcactcaaaagatagaatttgaaaacaacaaacag--- +------------------------------ctccaatctgcctccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttacaggctgatatgatcgccatcaagcaggggatactgaccgcgggc +ggcttttcccctactgatgcggcgagaggagcagtgggtgcacccatgaccaaagtcctcgactggtctggt +actcgttactgggctccaaattccacgaggacaacaggttactcagggcagtttacatcagca--------- +ccagtgcacatgcctacaaaaacaattcagcccactcc---------------------------------t +gttaaaa----------------ggactcagcctctttcttcctcttcag---------------------- +---------------gt--agtatctatagtctttcaacacagagcactgccttgaccaagccctcttcagg +ctcttctt-----------ctgtt------------tcttctgcttctacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------tagaacagcaaattgggt---aaatca +gcaaagaagcctcagccccttcatga---gtggtgcactcaacatatctcatgtaacacctccatcgagcag +ggcttcg---agtt------------------------------cgggga---cagtctcaactgtacccaa +agaagttttgga-ctcctggacacctgcat------------tcaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaat--------- +---c-a-a-t-tagttt---taa---tt------aaattttgattgg-at-ttaattt--------taatt- +---------------gg---atcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>AB933644.1/1-7509 |Norovirus Hu/GII.4/Toyama1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagcgttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggcccaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaagatgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gactaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggatctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933645.1/1-7509 |Norovirus Hu/GII.4/Toyama4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------ctgtgtcgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagaggtcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaagatgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gactaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggatctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933646.1/1-7509 |Norovirus Hu/GII.4/Shimane1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcgt +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ttaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctaggtgtgcacaaacccccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaagcccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgcataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtacctacaggacagggacaaatac---t +acgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaactagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttgggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgactt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgaagtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaagtgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933647.1/1-7509 |Norovirus Hu/GII.4/Aomori1/2009/JP genomic RNA, complete genome +--------atgaagat---ggggtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactgctgaactggtc-------aaagggacccc +tcc-----------------------------tcccccgaccaacgg------agaggatgaagtagtggtt +tcttatactg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagatataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaagaagagct +ttccagcataccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgatacttgcccccttactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caaccttgaaccgtg-ctcgaggcgcatcgatttcttggtgtatgttgaaagccccgaggtcaaaagagcga +agcctgatgtccggggccaacctgacatgtggaaaaacgcttttaattccactctctcacataaaaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtatccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaata +aggactgatgtgactggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcacgttatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcataccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggcttgactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaacctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaacga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccacttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tatagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933648.1/1-7509 |Norovirus Hu/GII.4/Aomori2/2009/JP genomic RNA, complete genome +--------atgaagat---ggggtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaattttcaagggaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagatataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaagaagagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgatacttgcccccttactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttccgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtatccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaata +aggactgatgtgactggcatgatcctagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagttatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaacga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccacttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tatagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933649.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity3/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagtcgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagatttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtgga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933650.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagtcgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagatttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933651.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggctattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgacgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggagaggaacggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccaccaaacaaattcaggtgcataagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +aataagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtattggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtggaggggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccatttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagctccacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctt---------tataatggctggaactttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcagcatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933652.1/1-7509 |Norovirus Hu/GII.4/Iwate2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtcctcgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaaaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtggaggggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtacctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933653.1/1-7509 |Norovirus Hu/GII.4/Aichi1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacaaggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtcctcgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggttatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgatagagttcagagcatctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaagaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacccggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacattgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaaaattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +attctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933654.1/1-7509 |Norovirus Hu/GII.4/Aichi4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacaaggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaca--------aaacccaaagatgatgaggagtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaaccgagggaaagaaaggcaagaaca +aggctggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcagggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgagggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933655.1/1-7509 |Norovirus Hu/GII.4/Shimane2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------gaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagcg----------ccag---agatggtgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggagcaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgattttgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgccgcagcacgctccctagtgcaccgagcgaaagaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +tgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaacttgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgactttccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcaggactgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctagccttcaggcagcttgctgctgaaaacaagt +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtatacagtggttgcacctacacacttgagtctgatg +gcaagggtagtgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggttggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggctctgtattctatcatcc +agattgctggggctgcatttgtcactacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaatctgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaagaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagagaaacccagaagacttcaaacctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtttccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggcgtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcacggtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatttaggcaccacacca +ggtgattgcggctgtccctacatctataagaggggaaacgactatgtggtcataggagtccacacagctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcactaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtcctcgaacagacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcacgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgattcggtgt +gctcgggcattcggaggcctgatggatgaactcaaagcacactgcgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattctaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctctctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagatataaaattagacccagagaaattgacagcaaagctt +aaagaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaagctggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggtttgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccctttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatatttct +ggtgccacccacagttgagtcaagaaccaagccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcactactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattacgacccaacagaagaaattccagc +ccccctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgtccaatttggta---------ctgatacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------taggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagctcccaattttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaagaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ctaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcttccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933656.1/1-7509 |Norovirus Hu/GII.4/Miyazaki1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------gaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agacggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcattaacatcctggcttcatgtgattg +gactttcgcaggcgtagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaggtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaattttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggaccccttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctagggactccagatttcgtgggaaagatccaaggtgtactcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933657.1/1-7509 |Norovirus Hu/GII.4/Aomori3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtcctcgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcagccta +tatgaaaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +tactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggctctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gctcctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933658.1/1-7509 |Norovirus Hu/GII.4/Aomori4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtcctcgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcagccta +tatgaaaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +tactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggctctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gctcctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933659.1/1-7509 |Norovirus Hu/GII.4/Iwate5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaaacaaatgaactggctatggtgagatccatcgaggatgcagt +cctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaaaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctaaaaaaactgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933660.1/1-7509 |Norovirus Hu/GII.4/Toyama5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgataacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcgtcagggctgctccatgagagattggatgagtttgaactacagggtc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagttctccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcatcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcagggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttccttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933661.1/1-7509 |Norovirus Hu/GII.4/Chiba1/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagaccagtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtagctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgagcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933662.1/1-7509 |Norovirus Hu/GII.4/Chiba3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctactttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagcttcgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagttatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccatttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933663.1/1-7509 |Norovirus Hu/GII.4/Chiba5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactacggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaagattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaatatagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcactaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagactcagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933664.1/1-7509 |Norovirus Hu/GII.4/Nagano1/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaataatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggctgcc +gctcgtggggggaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctagggga +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccgcagccaacctcgtcccggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcgggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcaata---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933665.1/1-7509 |Norovirus Hu/GII.4/Aichi5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaagcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtacaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggccaccaacaaagacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaggatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggttatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccag +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcac +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933666.1/1-7509 |Norovirus Hu/GII.4/Osaka2/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctacgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacttaatagggaagctaaggcctctcaacatcatcaacatcctggcttcgtgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgttccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgtaatggcgt +cgatcactgggatgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagctctgatttctcacacataaaattgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaagcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaaagagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaaatgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccgacaaggacgggtgcccaaaacccaaa-- +-gac----actgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgaataca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggctctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaacgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcgtaacatcaacccacgtcataccccagggcgcaaaggagttcttc +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtccactggagaactcatgcccctggcagctagaatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatctgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcctagggagtgccccaaaacttagcaccaaaaccaag +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccgccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaaaaacgactgctggaacggggaatcattcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcatttggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggcatg +aacatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctctctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctccttactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatcttaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctactattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtctagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggcaccacccaactgtctcccgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccagggtgtactcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaagacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcacaacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattctggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaacccagacacgggtagggtcctgtttgagtgcaaactccacaa +atcaggctatgtcacagtggctcataccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctt---------tataatggccggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaatgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgttcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933667.1/1-7509 |Norovirus Hu/GII.4/Osaka3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctacgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagatcaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactctaaattgaagaaggtggctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaataggaaagacccaccttgctag +ggaagtggccaagagagtcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaagttgg +cactggctccacagggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtctccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaaaggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggacccc +agagtcaaggatggcccctcgctgcagcaagtcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagatgctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacagttgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgtccagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ccatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtcgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933668.1/1-7509 |Norovirus Hu/GII.4/Osaka4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgacgtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctagggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaaaaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagaaatcctaaagttaat +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgccgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgt---cgtgaaaactac +tttgtcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccgg- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcgggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933669.1/1-7509 |Norovirus Hu/GII.4/Sakai1/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacaaggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaagaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggttatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaggtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcatctccgttcagaccaacaatgagctggctggcgtcc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagaaga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggagaggaacggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattctaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccgcatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933670.1/1-7509 |Norovirus Hu/GII.4/Sakai2/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgataacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagttaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcagggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccagaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttactttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933671.1/1-7509 |Norovirus Hu/GII.4/Hiroshima3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctggcatttttaaaggag----ccctcggggcgcggcctaaacagccc-cccccgaggaaaaaaaaacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttggttacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggacaaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccttttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctacgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtgggtcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933672.1/1-7509 |Norovirus Hu/GII.4/Hiroshima4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgatatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgagcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtaactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattggtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcttcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcgttgggattcaacacaacagagagccgtgctggcagccgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggctgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttacat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgtttccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcgaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacgtttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgcttttagaaggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcctaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacacctt-----------ctagt------------gcttttactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933673.1/1-7509 |Norovirus Hu/GII.4/Miyazaki2/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagagagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggccaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgcaggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933674.1/1-7509 |Norovirus Hu/GII.4/Miyazaki3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagagagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgcaggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933675.1/1-7509 |Norovirus Hu/GII.4/Hokkaido4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatgccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttattctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccccgtagtaatggggggaattggtttggttctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggattgatggatacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggtgagggggaagccacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgctccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccgagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagaactaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacagaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgacgttaggaataatttctaccacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccagtcttaactgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcaaa------------------------------------------------tt---- +-------ctcaca----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacgtttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgtaagcttcataa +atcaggctatgtcacagtagctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ttagc------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933676.1/1-7506 |Norovirus Hu/GII.4/Niigata2/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcgtcct---cagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccggacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaacata +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgatatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgagcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtaactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatggtccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggcctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatacgggctgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagaactaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagctgtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgtttccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcagcatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacgtttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gtacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcctaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctagt------------gcttttactgctactt-------------------- +----------ctatat-----attcaaatca------aacagtttcaac----------gag--------ac +ttggttc--------tacagcaggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933677.1/1-7509 |Norovirus Hu/GII.4/Niigata3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgcggttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcgagcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatactcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agacgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgcataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggccaccaacaaagacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactacttatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagtcaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcaag------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcac +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933678.1/1-7509 |Norovirus Hu/GII.4/Niigata4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctacttcagaactggta-------aaaaagatccc +tcc-----------------------------tcctccgcccaacgg------agaggatgaagtagtggtc +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcattaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactagctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcctgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcttccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggatgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtatgcagaagctcccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagctctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaatccaaa-- +-gat----attgagg---agtttgtcatttcatctgacgacattaatactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgacgagtaca +agagaattagagaagagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacgattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-taaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgcgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatggagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatttga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcactgc---cggaaaaattat +atttgcagcagtcccaccaaattttccagctgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taaccagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtacagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcacacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933679.1/1-7509 |Norovirus Hu/GII.4/Fukui2/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatgggggatacggtttacctgagctctccggcgttaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttgtttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatatttct +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttattgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gggggactcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933680.1/1-7509 |Norovirus Hu/GII.4/Fukui3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgccgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcaggccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcagactgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +taactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgatatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgagcatcagggctgctccatgagaggctggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtaactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgctacccagggaggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggctgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacctagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgtttccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcgaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacgtttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgcttttagaaggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcctaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctagt------------gcttttactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933681.1/1-7509 |Norovirus Hu/GII.4/Fukui4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aagtgctttctagcat +ggctgtcacttttaaacgag----ccggcggtgaacggcgttccccgcgt-ccgttcaatgctttacctcac +cga---------------------ccccaatcttcattcacacctgaactggtt-------gaaaagatccc +tca-----------------------------ccccctgtccaatca------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgacctttctcacgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccatacccagttttttcagacccttgctatgccttttgttgctgggacctggatctaaactactcacggct +gag---taggagaatgatccagagaaccactggctttttcagaccctaccaagattggaatacgaaacccct +ccccactatggatgattccaaatgggagaaggtagcaaatatattcctgtgcaccctgtcttcactatttaa +taggcccttgcaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagaaatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaaaaagtgccagattgtgcataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgtcgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccggcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacgcaa---------------------------agttcaccccgg- +--------tcggtgtcatccaggatggtagcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctgctcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------attttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctgat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933682.1/1-7509 |Norovirus Hu/GII.4/Nagano3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatgccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtagtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggttttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccccgtagtaatggggggaattggtttggttctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcctgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtcttcgacagcgatgttattatcatcactactaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagctcccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgtaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctattatcc +agatcgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaaacctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgctaaaagcatggatctgggcaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccgagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacagaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacacaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacgtttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatcg------aactgtctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933683.1/1-7509 |Norovirus Hu/GII.4/Sakai3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------acgagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataacacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccacttaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgataacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccaggatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcagggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcaca---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aaccgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933684.1/1-7509 |Norovirus Hu/GII.4/Sakai4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagatactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgagctggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttatgtctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaggtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcatacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaacggcaaatactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagaagatttcaaacctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcatcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcactattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------atcttcgggggcact---------------------------------g +ccaggaa----------------ggatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933685.1/1-7509 |Norovirus Hu/GII.4/Ehime3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggagataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccactgtcaggcagcc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaatcatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaattgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaacttgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacttggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaggacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatttacaagagagggaatgactatgtggtcattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctctctgcagcaagtcatgagggaccagctgaaaccatttacagaacctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggcccaggtggtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatctctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggcctgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtattgatccccttacctgatgttaggaataacttttatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtttcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaaccccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----ct-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcggttcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaatacaa---------------------------aattcactccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-gatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccctatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gaaccaaccctaggactcc------------------------------ +------------------------------aacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacatctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933686.1/1-7509 |Norovirus Hu/GII.4/Ehime5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaagcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------gtccaccaacaaagacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctcttttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------atcttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgcac +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933687.1/1-7509 |Norovirus Hu/GII.4/Shimane4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggagataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccactgtcaggcagcc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaatcatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaattgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaacttgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacttggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaggacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctctctgcagcaagtcatgagggaccagctgaaaccatttacagaacctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtggtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggggaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggcctgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtattgatccccttacctgatgttaggaataacttttatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtttcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaaccccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcggttcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaatacaa---------------------------aattcactccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-gatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccctatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gaaccaaccctaggactcc------------------------------ +------------------------------aacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacatctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933688.1/1-7509 |Norovirus Hu/GII.4/Shimane5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggagataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccactgtcaggcagcc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaatcatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaattgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaacttgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacttggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaggacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctctctgcagcaagtcatgagggaccagctgaaaccatttacagaacctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtggtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggggaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggcctgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtattgatccccttacctgatgttaggaataacttttatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtttcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaaccccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcggttcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaatacaa---------------------------aattcactccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-gatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccctatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gaaccaaccctaggactcc------------------------------ +------------------------------aacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacatctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcaa +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933689.1/1-7509 |Norovirus Hu/GII.4/Saga5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattacggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcgtttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gttgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaacgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttggaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933690.1/1-7509 |Norovirus Hu/GII.4/Miyazaki4/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtctgcgctattcac +cagacccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacatataaagttgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttgtcaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataagt +acgggctgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatacctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagcgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccaaggcgcgaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggccattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttacagcaagttatgagggaccagttgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcataaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccgtcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccgcattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgacgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctacggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccggatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaaaggagatggttcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagctcccactttcccgggtg +aacaactccttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggttcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcttttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagggctacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagccaatcccagaactcc------------------------------ +------------------------------tacccccgctcggagctccccc------------------ag +cacatctt-----------ctaat------------acttctgctgcaactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagttgggttgaggacca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933691.1/1-7509 |Norovirus Hu/GII.4/Miyazaki5/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtctgcgctattcac +cagacccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacatataaagttgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttgtcaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataagt +acgggctgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatacctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagcgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccaaggcgcgaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggccattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttacagcaagttatgagggaccagttgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcataaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccgtcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccgcattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgacgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctacggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccggatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaaaggagatggttcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagctcccactttcccgggtg +aacaactccttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggttcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcttttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagggctacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagccaatcccagaactcc------------------------------ +------------------------------tacccccgctcggagctccccc------------------ag +cacatctt-----------ctaat------------acttctgctgcaactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagttgggttgaggacca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933692.1/1-7509 |Norovirus Hu/GII.4/Nagano5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcgtttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gttgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaacgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaagttagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttggaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933693.1/1-7509 |Norovirus Hu/GII.4/Sakai7/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggttttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctgaatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gtctttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaagaagaaagggcttctctcggtttagtcacaggtgctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactacttatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcagggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacacgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagcgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaaccccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933694.1/1-7509 |Norovirus Hu/GII.4/Sakai9/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaagtctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaacagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagccgctgaaaacaagt +acgggttggtggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgttaccacgcgcatcatcaagcgtgtga------acattcaagacctatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatactaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgagtttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------a +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933695.1/1-7509 |Norovirus Hu/GII.4/Sakai10/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagccgctgaaaacaagt +acgggttggtggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgttaccacgcgcatcatcaagcgtgtga------acattcaagacctatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatactaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgagtttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------a +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933696.1/1-7509 |Norovirus Hu/GII.4/Shimane1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---ggatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccacaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggtaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccgtcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaggctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcgctccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccatccctttggagaagttgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttagcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtggggaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggttatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933697.1/1-7509 |Norovirus Hu/GII.4/Shimane2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttggtgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcacgaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccggggcggcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaagggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccagcgtagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggtaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccgtcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaggctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggaccccttgttatctctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcgctccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggctagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccatccctttggagaagttgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933698.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity2/2011/JP genomic RNA, complete genome +--------atgaagaa---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaaacagtatgt +tcttatagtg----------ctaa---agatggtgtttccggcttacctgagctctccactgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagaaatctaccattatggcctatatgttgagcgaggtcttgt +gctgggcgtgcacaaaccaccagctgccattagcctcgcaaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggggatttcgagttacaaggacctgaggatcttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +gctagatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgatcgctccctgcctccccgagcgaaggaggagct +ttctcgcacgtctagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcccgctgcaagaactcgatgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcctcattatcactactaacctggccaaccctgcaccactggactatgt +caacttggaagctcg-ctcgaggcgcattgatttcctcgtgtatgcagaaacccccgaggtcgaaaaggcga +agcatgacttcccggggcgacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaattacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacacctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactctatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttccctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgctcctaacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacccggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaggtc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggaaggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcggtgcctttgttgttcaaccgca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatttgcacctt +caaag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccacaaagctacagt +ctacactgggagtgctccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcaaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtggcccccactttcccgggtg +aacaacttcttttctttaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaaggttgattttgagaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactagaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgagggtca +aaacagaaatttgtcacctttcatga---ggggggctcacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatacgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933699.1/1-7509 |Norovirus Hu/GII.4/Akita2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgatgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gaa---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggcttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +aaccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagccgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggagactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcatccatcgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggtatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaatgttctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +caatcagttaaatgat---tctaccattaaattgatagcaatgttgtatacgccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgagtttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacatctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaatgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933700.1/1-7509 |Norovirus Hu/GII.4/Toyama2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcatttggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933701.1/1-7509 |Norovirus Hu/GII.4/Akita3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgatgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagattcc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gaa---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggcttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagctagccgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataacggtcgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggtatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaatattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaattgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacgccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgagtttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacatctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatcctgacacgggtagggtcctgtttgagtgcaagcttcacaa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933702.1/1-7509 |Norovirus Hu/GII.4/Osaka3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcagtcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctgaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gggcaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagttgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgataagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataagattagacccagagaagttgacagcaaagcta +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctatcaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggactggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaagtgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatgc-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933703.1/1-7509 |Norovirus Hu/GII.4/Shimane4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaggaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcaaggtcttgt +gttgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---aatacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtggccaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgct +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggtatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggtttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacttacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaaatggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gac----attgaag---agttcgtcatttcatctgacgacattaaaactgaaggtaagaaagggaagaaca +aggccggccgtggcaagaagcacacagccttctcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgcc +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatggccccagtctacacagctgcacttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcggaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcgctccacggcccaacgttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +agtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagacttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtagg-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacagcttcttttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcgtctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcctccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggtcttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacgtacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgccc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933704.1/1-7509 |Norovirus Hu/GII.4/Ehime1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-tccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcatggct +gtg---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgactg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgctcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcgtttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaggtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gttgagg---agttcgtcatttcatttgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaggacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaacgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaaatcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaagttagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggtcctagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagtatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttggaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaaggaagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933705.1/1-7509 |Norovirus Hu/GII.4/Ehime2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtatctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggttttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacaggagcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaaccctatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgcaactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933706.1/1-7509 |Norovirus Hu/GII.4/Saga1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgctgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggaattcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtaccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtttgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatgtcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933707.1/1-7509 |Norovirus Hu/GII.4/Saga2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacgcagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +atgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgcacgtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagtcaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------ggtgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933708.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgttcgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933709.1/1-7509 |Norovirus Hu/GII.4/Hokkaido1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgttgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatataccattacggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagcgaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---tgttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaacgcggttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctatccttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaatgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +gaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccacgatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgaatctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933710.1/1-7509 |Norovirus Hu/GII.4/Aomori4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcatggcacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggacggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacgtaatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggatctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaagaact +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgggtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcgcgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtcctcagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgcttcct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933711.1/1-7509 |Norovirus Hu/GII.4/Aomori5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggacggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacgtaatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggatctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtcctcagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgcttcct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933712.1/1-7509 |Norovirus Hu/GII.4/Aomori6/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggacggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacgtaatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggatctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaattacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtcctcagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgcttcct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933713.1/1-7509 |Norovirus Hu/GII.4/Aomori7/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggacggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacgtaatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggatctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtcctcagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgcttcct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933714.1/1-7509 |Norovirus Hu/GII.4/Iwate2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcctgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggaacgggttcaccgccgggaaaactatgggatgagcactcccatcaa +tgactccctcgagaacccgttactcgcttacttttgccccctcactctattttgtgacaagattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcatagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaatacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccacacggccgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctcg +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagaatctatgttt +agatggatgagattctcagatctgagctcgtgggagggggatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaagtttgtcacctttcatga---agggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933715.1/1-7509 |Norovirus Hu/GII.4/Iwate4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgacgtagtggtt +tcttataatg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtttacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccttacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaactgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggatacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaagggcgggtgcccaaaacccaaa-- +-gat----actgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacaccgtcatatgtgccacccaggggggggctggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccccgctgtagcccccacttttccaggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggttctttttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatccgatgcccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggaact---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacct-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933716.1/1-7509 |Norovirus Hu/GII.4/Iwate5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacccactccagaactggtc-------aaaaaggtccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactctcc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgattcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcaggccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcacactaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtttgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagcacttaccaccttcaactttgaccgcaataaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtgggtgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcacctccattcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggagaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccgatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgtgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggttccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattggacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaatttcccgactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgatccaacagaagaagttccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcggata------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaagccaccaaaaagttgcaacaggaaatgatgagagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcgaggccccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcatc----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933717.1/1-7509 |Norovirus Hu/GII.4/Toyama5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttgcctgagcttttcaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcacactaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaacgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggccgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggaatgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcagatgtactggaccaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggggatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggctatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgttacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccaccaaaaagctgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgctcctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctcccct------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgggtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933718.1/1-7509 |Norovirus Hu/GII.4/Aichi1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctctccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgctgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgttaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgccaaaaccccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +atgaggaagtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggatctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaatgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtaccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatgtcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933719.1/1-7509 |Norovirus Hu/GII.4/Hiroshima1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aaggacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaagacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaactggagcagagctca +atactcaggcaaaaaaaaaggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933720.1/1-7509 |Norovirus Hu/GII.4/Hiroshima2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagtagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttttaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaaggtccagggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933721.1/1-7509 |Norovirus Hu/GII.4/Hiroshima4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccgctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacattatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagcactcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccattaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcagggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccagtcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933722.1/1-7509 |Norovirus Hu/GII.4/Ehime3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgctcccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagagtcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgtttgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctgtctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagagctaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctccaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933723.1/1-7509 |Norovirus Hu/GII.4/Saga3/2011/JP genomic RNA, complete genome +--------atgaagaa---ggcgtctaac-gacgcttccgctgccgttgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccaaggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagaatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacggtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tagttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcaag------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccgctttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933724.1/1-7509 |Norovirus Hu/GII.4/Aichi3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaggaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcaaggtcttgt +gttgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---aatacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcttggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgct +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggtatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggtttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatttcaatcaagaagtgccagattgtgtatagtggttgcacttacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaaatggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gac----attgaag---agttcgtcatttcatctgacgacattaaaactgaaggtaagaaagggaagaaca +aggccggccgtggcaagaagcacacagccttctcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaagaaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgcc +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatggccccagtctacacagctgcacttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcggaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggggaggccgcgctccacggcccaacgttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggggatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +agtgccacccacagttgagtcaaggactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcgcctgtcaatatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagacttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtagg-aatgtc------cccaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcgtctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcctccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttggaaggt +gggttctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggtcttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacgtacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaacca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgccc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933725.1/1-7509 |Norovirus Hu/GII.4/Shimane6/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctacgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattga +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactcc +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataactttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933726.1/1-7509 |Norovirus Hu/GII.4/Ehime4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aaa---------------------cccccacgaccacctactccagaactggtt-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttacctgagctttccaccgttaggcaacc +ggacgaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaacggcgt +tgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgagctacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaagatgtcaagactatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----aatgaag---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacagatac---t +acgaggaggtggccattgccagggcaaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacgggttctgaaa +tcaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagagggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgattgctggaatggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgactac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtgatggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctcttttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagtaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccggg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtttttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccagggtatgctcacccaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaacccagacacgggtagggtcctatttgagtgtaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcct---------tgtaatggctggagctttctttgctggattggcatctgatgttcttagctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagattttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccagtaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tgcccccgctcgggactccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagaaacttgtcacctttcatgc---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933727.1/1-7509 |Norovirus Hu/GII.4/Chiba10/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------gc----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-ccctcgagggaaataccacaa +gga---------------------cccccacgaccaaccactccagaactggtc-------aaaaaggtccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtactggatctaaacgattcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcaggccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaaaagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcacactaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtttgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagcacttaccaccttcaactttgaccgcaataaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtgggtgcacctacgcacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcacctccattcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggagaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtctccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggcgcaccgatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaagaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttgtcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattctaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggttccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattggacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacggtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgatccaacagaagaagttccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcggata------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaagccaccaaaaagttgcaacaggagatgatgagagtcaaacaggcagtgctcttagaaggt +ggattctcagaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggacccc------------------------------ +------------------------------tacccccgctcgaggctccctc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcatc----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933728.1/1-7467 |Norovirus Hu/GII.4/Akita5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgctttcgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------gaatgttttctaacat +ggctgtcacttttaaacgag----cccttggggcgcggcacaaacagcct-cccccgaaggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagctcaccactgtccggcagcc +ggaagagaccaacacggcgttcagcgttcccccactcaaccagagggagaacagggacgccaaggagccact +aaccggaacgatcctggaaatgtgggacggggagatctaccattacggtctgtatgtggaacgaggccttgt +actcggtgtgcacaaaccaccagctgccgtcagcctcgccaggattgaattggctccactctccctgtactg +gagaccagtgtacacaccac---agtatctcatctctccagacactcttaagaaactgcacggagagtcgtt +cccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaagctgaagaaggtagccgacgtattcttgtgcgcgctatcttcgctgttcac +taggcccatcaaagatataataggaaaagtgaaaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgttgatcgcccccttactaggtgattacgaactgcagggtcctgaggaccttgcggtgga +actcgttccagtggtgatgggggggataggtttggtgctgggattcaccaaagagaaggtcgggaaaatgtt +gtcatctgctgcaaccaccttaagagcttgcaaagaccttggtgcatacggactggaaatcctaaaattggt +tatgaagtggttcttcccaaagaaagaggaaacaaatgagctggctatggtgagagccatcgaggatgcggt +gctggatctcgaggcaatcgagaacaaccacatgaccaccctcctcaaagacaaagacagcttggcaaccta +catgagaaccctcgacgtcgaggaggagaaggccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaaggcctgtcgttgtcatgatatcaggcaaaccagggatagggaaaactcaccttgccag +ggcactggccaagaagatcgcagcttcgctcacaggagaccagcgtgtaggcctcatcccccgtaacggtgt +tgatcactgggatgcgtataagggggaaagagtcgtcctatgggacgattatggaatgagcaatcccatcca +cgacgccctcaggctacaggaacttgctgacacctgccccctcacgctaaactgtgacagaattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagctccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagccctgacttctcgcatataaaattga +cgctggccccgcaaggtggcttcgacaagaacggaaacaccccgcacgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcccgagcaacagggctactccatgagaggttagatgagtatgagctgcagggcc +cagcccccaccaccttcaactttgaccgcaacaaggtgcttgcattcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagactatgccagagctcaaacaag +cactcaagaacgttgcaatcaagagttgtcagatagtgtatggtggctgcacttataggcttgagtctgacg +gcaagggtgaagtgaaaattgacaaagttcagaacgccactgtacagaccaacaatgagcttgacggcgccc +tacaccaccttaggtgtgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattctatcatcc +aaattgctggggctgcatttgtgacctcgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggacacagagga--------gaccactagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcattgtctcatccgatgacctcaaaaccgagggcaaaaaggggaagaaca +agtctggccgtggtaagaagcacacggcattctcaagtaaaggtctcagtgatgaggagtatgatgagtaca +aaagaatcagagaagagaggaacggcaagtactccatagaggaataccttcaggacagagacaagtac---t +atgaggaggtggccatcgccagggcaaccgaagaggacttctgtgaggaagaagaggccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctccctcggcttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcccaaaggaaaactgtgggctgatgacgacaggagtgtcgact +acaatgagagactcgactttgaagccccaccaagcgtctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagtttgttcataacatcaactcatgtcatacccaagggcgcacaggagttcttt +ggtgtccccatcaaacaaattcaaatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaggaaggtgcacccgaggggaccgtggcctcactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatccaagggcgc +actgtcggaggtcagatgggcatgctcctaacaggatctaatgccaagagcatggacctgggcaccacacca +ggtgactgtggctgcccctacatctacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggggcgaaggagaagccacacttgagggcggtgac +aacaaggggacctactgcggtgcaccaatcttaggtccaggaagtgcaccgaagctcagcaccaagactaaa +ttctggaggtcatccacggcaccacttccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattacaacaagttatgagggaccagctgaaaccattcactgaacccagggga +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgaaaagtggacatttgcgcaggcatgtgcatcccttgacaagaccacttccagcggtcacccccac +cacttgcggaaaaatgactgctggaacggggagtcctttacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtacgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcattcgggggcctgatggaggaactcaaggcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggattcaactcaacaaagagccgtgttggcagcggccttggaaatcatgg-tcaaattctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctctcagtggaactccattgcccactgg +ctcctcactctgtgtgcactctctgaggttacaaacctgtcccctgacatcatccaggccaactcactcttc +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccggaaaagctaacagcaaaactc +aaggaatacgggttgaaaccgacccgtcctgacaagactgagggacccctcgtcatcactgaagacctgaac +ggcctaaccttcctgcggaggaccgtgacccgcgatccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaaggcccatacaattgatgtctctgctgggtgaggctgcactccacggtccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattaggaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccatacctttcccacctggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---aggtaaaatcat +atttgcagcaatcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccatat +agtagtagatgttaggcaattggaacctgtattgatccccttacctgatgttaggaacaatttctaccacta +caatcaaacaaaagag---tccaccatcaaattggtagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatatttct +ggtgccaccctcagttgaatcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccatacctttggaaagattgttcacgggtcctagcagtgcctttgtcgtccagccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccgag----------- +-----------tttcaac------------------------------------------------ca---- +-------ctcatg----------------------------------tttatgaa----------------- +----------------atgaatttggcttctcaaaattggaataattatgacccaacagaagaagtcccagc +ccctctgggaactccagattttgtgggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagacggttcgacc--------cgc-----------gcccacaaagcaacggt +gagcactggggctgccgacttcactccaaaactgggcagcatccggttcgaaa---------ccaccacgaa +ccgtgatct---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgacaa---ccaccaaaatgaaccccaacaatggagactcccagg +ttacgcaggtagg-gatgct------cacaacgtgcacctagcccctgccgtagcccccactttcccgggtg +agcaactccttttcttcagatccaccatgcccg------gatgcagtgggta------tccca--------- +--acatgaatttggattgtctactcccccaagaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgttgagattcgtgaatccagacacgggtagagttctgtttgagtgcaagcttcacaa +atcaggctatctcacagtggcccacaccggcccgtatgatttggtcatcccccccaatggctacttcagatt +tgattcgtgggtcaaccagttctacactcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctgccgttgctggattggcatctgatgtccttagctctggactt +ggttctctaatcaatgctgg---ggctggggtcattaaccaaaaagttgattttgaacacaacagacaattg +caacaagcttcctttgctttcagcaacaatcaacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttacagcagggtatgatgaaaatcaaacaggcaatgctcctagagggt +gggttctctgcaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaactacaacatacaatgcaggccgctttgccacccct--------- +ct---------------------accttcgggggcatc---------------------------------g +ccaggaa----------------gagctaaccccagggctac------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +cactcctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtct-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aaacaggagtttgtcatctttc------------------------------------------tccagtag +gtcctct---agcc------------------------------agggca---cagtctcaaccgtgcccaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctt +acattcgtacgcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933729.1/1-7506 |Norovirus Hu/GII.4/Fukui5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------aagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccaaacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgaactacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatagtaagatccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaaggccggtagtgttgatggtatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttccttgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggtcaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggttactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaaacgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactactagcaaggatgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagaatacgatgaataca +agagaattagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagctttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactgctcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttgggggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggccattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggcggcaaggacccc +agagtcaagggtggcccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaactattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatacgggttaaaaccaacccgtcccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaagatc +agcaagttagtcattgcagaactaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgacttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgttccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgatttcgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tggtgctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgacactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggctcccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagcta---ttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +catatctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acgttcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933730.1/1-7509 |Norovirus Hu/GII.4/Ehime1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcgacctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggtttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgaataca +agagaattagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagctttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactgctcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggccattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaagtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaactattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcctccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaagttggatccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgtcccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctacttggggaggccgcactccacggcccagcattctacagcaagatc +agtaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgacttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacaggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgacactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacaccggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacagggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +gtcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933731.1/1-7509 |Norovirus Hu/GII.4/Hokkaido1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgagatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcactaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcggcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaggaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactgg +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcgtcagggctacttcatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaaacgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggcagaatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctac---agagagtatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtggaggggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataacgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaaggtttcccccattcccttgaaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ccgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttattcaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggctct---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933732.1/1-7509 |Norovirus Hu/GII.4/Hokkaido2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggagttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933733.1/1-7509 |Norovirus Hu/GII.4/Hokkaido5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgagatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcactaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagtcttgcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagcccccatcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcggcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaggaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactgg +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcgtcagggctacttcatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaaacgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtggaggggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccgacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ccgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttattcaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggctct---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933734.1/1-7509 |Norovirus Hu/GII.4/Aomori5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaacttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgacctcgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagagctcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgagtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaggtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgctgagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcagagactaaaccattctttttcccagtcttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933735.1/1-7509 |Norovirus Hu/GII.4/Iwate4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933736.1/1-7509 |Norovirus Hu/GII.4/Aichi2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaattatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933737.1/1-7509 |Norovirus Hu/GII.4/Aichi3/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggctttcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggacctcgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgcttaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933738.1/1-7509 |Norovirus Hu/GII.4/Niigata5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatccaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgccagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcttcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggaattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacctgaggaccttgcagtgga +gctcgtccctgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatagtgaggtctatcgaggatgcagt +cctggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaagaaaaggccaggaaactttcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcattgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaatcctatcca +cgaagccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaaaaacgccttcagttctgatttctcacacataaaactag +cactggcccctcagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgttagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggtaatgtgaaggttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggttcacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggaggtcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacacgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagatttggcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgactacaaagctc +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccttctgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggggaggccgctctccacggcccaacattctacagcaaaatc +agcaaattggtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagcctatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctaccttttcccattggccagaaaggtcaa +aggttatgcagggggttttgaagtgcaggtaattcttgcggggaaagcgttccccgc---cgggaaaatcat +atttgcagcatccccacccaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggagagatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagtgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccctgctgtagcccccactttcccgggtg +agcaactcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgcttccccaggagtgggtgcagtatttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatggtgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggtccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------acccttgggggcact---------------------------------g +ccaggaa----------------gagctaatctcgggactgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933739.1/1-7509 |Norovirus Hu/GII.4/Fukui1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933740.1/1-7509 |Norovirus Hu/GII.4/Chiba2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagagattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatagatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaggccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggtaatgtgaaggttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +ttcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagacttggcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtgactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctatcaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +tgcatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcatttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933741.1/1-7509 |Norovirus Hu/GII.4/Chiba4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgagatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcactaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcggcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaggaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactgg +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcgtcagggctacttcatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaaacgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgttttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ccgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttattcaggatggcagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933742.1/1-7509 |Norovirus Hu/GII.4/Nagano2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaaaggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacctaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggtaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagagacattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttagatt +tgattcctggatcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttcctttcaatttagtagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagaggga +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatctcagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933743.1/1-7509 |Norovirus Hu/GII.4/Nagano4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcgcctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-agcatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933744.1/1-7509 |Norovirus Hu/GII.4/Nagano5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggtctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagagattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaggccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccgccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggcaatgtgaaggttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggtaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagaccacttccagtggttatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagacttggcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctatcaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgctacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacagattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933745.1/1-7509 |Norovirus Hu/GII.4/Aichi3/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaaaggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaagccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccatcagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaaccacgtcaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgtcaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccctactttcccaggcg +agcagctcctcttcttcagatccattatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttcctttcaatttagtagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933746.1/1-7509 |Norovirus Hu/GII.4/Osaka1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgatcacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggctttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccggattctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggcttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgattcaaaattaaagaaggtagctaatatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagggcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaaatggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgctgcacgttctctggtgcaccgagcgaaggaggaact +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atggattgatggacacaatgagagttggaaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcgtttgttaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaatccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagaatttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggaaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggacagatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccaaatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctataagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagttaagggtggcccttcactgcagcaagtcatgagggaacagttaaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagactatcattaatacccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaagatc +agtaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcgt +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcttttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaggaaatcccagc +ccctctaggaaccccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgaattttccccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggtgttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaattaatgctgg---ggccggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcatttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccaatgctagtactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggttgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaac------------tcctctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcaccttttatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933747.1/1-7509 |Norovirus Hu/GII.4/Osaka5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcatgcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggacgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggatgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaataccccgcacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctacttcatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtaaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagtattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggcctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccattaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggtacctacgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgactatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtcagcacagacataaaactggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacctatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatttga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgtcaggcaattggaacctgtgttgattcccttacccgatgttagaaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctcttttaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctat------------------------------ +------------------------------tgtccccgctcggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933748.1/1-7509 |Norovirus Hu/GII.4/Ehime5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +gga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---aaatggtgtttccggcttgcccgacctttccaccgtcaggcaacc +ggaagaatctaacactgccttatgtgtcccccaggggagtgaaggagaggctagggatgctaaggaaccact +gactggagcaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggaact +ttccagcagaccaagacctgtggtgctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacatgccccctcactctaaactgtgacaggatcgaaaacaa +agggaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggcaccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggccgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagatctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggatagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaagaaagagcctctctcggtctggtcacgggctctgaaa +tcaggaaaaggaacccagaagatttcaaacccaaaggaaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaaatcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcataaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacttgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggatcct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccattatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcggaacattaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtaccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggtgtgctcctaggcactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcgctgctaagatttgtgaacccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccactccc--------- +ca---------------------accctcggggacact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933749.1/1-7512 |Norovirus Hu/GII.4/Sakai5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtaaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaattgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcatccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaacgacgtcaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgccgtcgtgagaatcat +attttcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagtggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctacct-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933750.1/1-7509 |Norovirus Hu/GII.4/Hiroshima1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaaagcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagccttatgtgattg +gacttttgcaggcatggtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctagccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctta +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agaatcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgtacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaagagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagccagtcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------ccttctattgctactt-------------------- +----------ctgtga-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccattgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933751.1/1-7509 |Norovirus Hu/GII.4/Hiroshima5/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcttcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggctagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaggtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaaaggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggatacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggagactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttgggtcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgct +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttttggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagctggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcactgacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaaataaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatctggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttccttccaatttagtagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaatgggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933752.1/1-7509 |Norovirus Hu/GII.4/Ehime2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagagattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaggccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgagaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggtaatgtgaaggttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgt +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggtaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagacttggcaaccatgatccggtgt +gctcgagcgttcggaggcttaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctatcaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacagattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgttcccgcccagggttcctcc------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933753.1/1-7509 |Norovirus Hu/GII.4/Ehime4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagagattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttctgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaagatagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttgat +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaggccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaattacagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacaacttgctgctgagaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggtaatgtgaaggttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaagggtaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaattttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgt +actgttggaggccagatgggcatgcttctgacaggatccaatgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggggaggctatacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctgggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacggcaccgctcccacctggcacctatgaaccagcctatcttggtggtaaagaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aaaccaccaaagccaagtgtattagaggctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcgcaagcttgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggacgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagacttggcaaccatgatccggtgt +gctcgagcgttcggaggcttaatggatgaactcaaagcacactgtgtcacacttcccattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagctctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgactacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtccctgctgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctatcaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacagattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttagactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgttcccgcccagggttcctcc------------------ag +tacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933754.1/1-7509 |Norovirus Hu/GII.4/Saga1/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gatgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggatctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacagaatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagtatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccggaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggagaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactaggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccag +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaagaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgt---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcattcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933755.1/1-7509 |Norovirus Hu/GII.4/Saga2/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaaaatccc +ccc-----------------------------ccccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaatatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaagcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgatacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataagt +atggattgatggacacaatgagagttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaatccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacgaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggaatgaaggagaggctacacttgaaggaggtgac +aacaaggggacatactgtggagcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagaccatcatcaatgcccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggacttggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgaaaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattttacagcaagatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaactttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +attttcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccataaagttgatagcgatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagctgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagagatcccagc +ccctctagggactccagatttcgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgaattttccccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgatgccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcagctcctctttttcaggtctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagcatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +catatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933756.1/1-7509 |Norovirus Hu/GII.4/Saga3/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccttcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattctcaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggggtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacacccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933757.1/1-7509 |Norovirus Hu/GII.4/Saga4/2009/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccatcagcctcgctagggtagagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaatatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaagcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgctacaaggacccgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcgtccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgatacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaacttg +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataagt +atggattgatggacacaatgagagttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaatccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacatactgtggagcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaag +ttctggaggtcgtccacagcaccgctcccacctggcacctttgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagaccatcatcaatgcccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggacttggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgaaaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggctcaggtagtcgcggaagaccttctttctcctagtgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcaccaacttgtcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattttacagcaagatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaactttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +attttcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccataaaattgatagcgatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccactcctttggaaaagctgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcata----------------------------------actataca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagagatcccagc +ccctctagggactccagatttcgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgaattttccccaaaactgggtagagttcaagttgcca---------ctgacacaaa +caatgattt---tgatgccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatgct------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcagctcctctttttcaggtctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagcatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +catatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933758.1/1-7509 |Norovirus Hu/GII.4/Chiba6/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacggccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtagtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctcttaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttctacaggccctaccaagactggaataggaaacccct +tcccaccatggatgattccaaattaaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaggcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccgccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctagtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtggtgttgatgatatcaggcagaccagggatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgacttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacaaggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgaaggttgggaaacaactcaaggatgtcaggaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctatatacttgagtctgatg +gcaagggctgtgtgaaagttgatagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaagtccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagaacttctctcggcctggttacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacctaaagggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggctccaccaagcatctggtcgagaatagtcaacttcggttcaggctggg +gattctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaacgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccgcagcaccgctcccacctggcacttatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcattgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccgaagccaagtgtattagaagctgccaagaagaccatcattaatgcccttgagcaaacaattgac +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagtatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacctggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctatctgaagtcacaaacttgtcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgagacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcgttttacagcaaggtc +agcaaattggtcattgcagagctaaaagaaggaggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataactttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgacgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtcctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacggatggctccacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgaattttccccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgatgctaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagctcccacttttccgggtg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcgggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaacgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggagatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaaccaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccca--------- +ca---------------------atcctcgggggcatt---------------------------------a +caaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgcccccgcccggggttcccct------------------ag +tacacctt-----------ctaac------------tcttctattactactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933759.1/1-7509 |Norovirus Hu/GII.4/Nagano26/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggcgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcttcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcttttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcgaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgaaagactagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccaaatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgccaaaaccccaaa-- +-gat----gatgagg---tgttcgtcatttcatctgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccaaggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggaaccgtggttacactactcatcaaa +agatccactggggagctcatgcccctggcagctaggatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcttatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagtggccatccgcat +cacacgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgatttc +acaatatcaattaacgagggccttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaagactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatttgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagaacctaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtctacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcgacc--------cgt-----------ggacacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatctggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggatccgggctt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaattcagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccatccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------aa +cacacctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933760.1/1-7509 |Norovirus Hu/GII.4/Hiroshima5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgaccccgcaaaattttcaagtgacg---------------gagtgctttttagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctagacagcct-cccccgagggaaaaaccccaa +aaa---------------------cccccccgaccccctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctgatcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaattaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgtcgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgtaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933761.1/1-7512 |Norovirus Hu/GII.4/Osaka4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacgacgcgcaatcttcaagtgacg---------------gaatgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccccccaacgg------aaaggatgaaataggggtt +tcttatagtg----------tcaa---agatggggtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtaaagatgctaaggagccact +tactggaacaattctggaaatgggggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggggtgcacaaaccaccagttgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gaatgtcaggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcacttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctgatcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtattagaagctgctaaggagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattttccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctggagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaatcaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatcttatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgccaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgtaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933762.1/1-7509 |Norovirus Hu/GII.4/Hokkaido4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgcttccgctgttgct------------aacagc +a------at----aacgacaccgcaaaatcttcatgtgaag---------------gagtgctttttagcat +gggtgtcacttttaaacgag----ccctaggggcccggcctaaacagcct-ccccctagggaaaaaccacaa +aga---------------------cccccacgaccacgtactccagaactggtc-------aaaaatattcc +ccc-----------------------------tccccctcccaccgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aggtggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatataacacagccttcagtgtccctccactcaaccagaggcagaatagagatggtaaggagccact +tactggaacaattccggaaatgtgggatggggaaatctacctttatcgcctgtatgtggaggggggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataagaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacgggaaaggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcaggaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------atatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggctaagatccggcaga +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggctcaggctggg +gattctgggtctccc-ctagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggttattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgctacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacagaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttccttccaatttagtagcaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttccattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933763.1/1-7512 |Norovirus Hu/GII.4/Osaka2/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacgaaccgcaatcttcaagtgacg---------------gaatgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctagggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcggggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaaccggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gacga-tgatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtaccacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtaac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaaatgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccaccagagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcgcacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaagtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgagacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccaggatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933764.1/1-7509 |Norovirus Hu/GII.4/Osaka1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aactacgaaccgcaatcttcaagtgacg---------------gaatgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccccccaacgg------aaaggatgaaataggggtt +tcttatagtg----------tcaa---aaatggggtttccggcttgcctgacctttcccccgtcgggcaacc +ggaaaaatctaacacggccttcagggtccctcccctcaatcaaagggagagtaaaaatgctaaggagcccct +tactggaacaattctggaaatgggggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggggggcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gaaacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacttt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcggggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaggcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctgatcacaggttctgaaa +ttaggagaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatctttgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtgatggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggttaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaattaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgttccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgtaggcagcctctcttcgctc +acattcgcaagcgagggaagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933765.1/1-7509 |Norovirus Hu/GII.4/Aichi5/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tacaggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaagggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttttgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcagacaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggggatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgagcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggatctgggttgaggatca +aaataggaatttgtcacccttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933766.1/1-7509 |Norovirus Hu/GII.4/Aichi4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------tgaggatgaaatagtggtt +tcttatagtg----------ccaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctttaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccatcttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgctctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagctccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaagggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgatgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttttgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgagccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtactagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggacccctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagcaggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggaactttctttgctggattggcaactgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctagaactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggatctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933767.1/1-7509 |Norovirus Hu/GII.4/Hokkaido3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccgcgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgccagacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacgactggtttcttcaggccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gtcttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggttagagatcctgaagttggt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaataggaaagacccatctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgctaagcgcatga------acatacaaaacctatggt +ccaagccacaagtgggaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagaacctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatt +aggactgatgtgacaggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcgggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---tttcccattcctttggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaataatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagccttccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933768.1/1-7509 |Norovirus Hu/GII.4/Nagano7/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgagatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcactaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcggcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaggaactcgctgacacttgccccctcactctaaactgtgacagaattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactgg +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcgtcagggctacttcatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaaacgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgtaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggttattggagtccacacggctgcc +gcacgtgggggaaacaccgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgttttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgctttcgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ccgatacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttattcaggatggcagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccctaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcagtgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933769.1/1-7509 |Norovirus Hu/GII.4/Nagano4/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaagcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggagatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgctttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggaattctctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgttcccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtggatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctagctatggtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaggagaatcgcagcctctcttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccagcctgatatgtggaagaacgctttcagctctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcttcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaacaaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacacactcgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggatagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggggtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccatattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtactcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagatacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacacgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacaggaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaagactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcctttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933770.1/1-7509 |Norovirus Hu/GII.4/Niigata3/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaagcttcaagtgacg---------------gaatgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaataggggtt +tcttatagtg----------tcaa---agatggggtttccggcttgcctgacctttccaccgtcaggcaacc +ggaaaaatctaacacggccttcagtgtccctcccctcaatcaaagggagagtaaaaatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcttttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcctggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcacttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctgatcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtattagaagctgctaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattttccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgccaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgtaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB933771.1/1-7509 |Norovirus Hu/GII.4/Hiroshimacity1/2011/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----cccgcggggcgcgcgctaaacagccc-ccccctagggaaataccacaa +aca---------------------cccccacgaccacctactccaggactggtc-------aaaaagatccc +ccc-----------------------------tccccatcccaacgg------aaaggatgcgctcctggtt +tcttatatgt----------ccaa---ggatggcgggaccggtttacctgacctctccacccttgggcaacc +gggagaaaccaacacggctttatttgtccctcctctcaagctaagggagaatagatatgctaaggaaccact +tactggaacaattctggcaatgtgtgaaggacaaatacaccattatctgctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatggtccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaacgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggttcaggctggg +gattctgggtctccctccagtctgtt-ataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaggcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagttacaaacctatcccctgaaaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggctaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggggacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgacgtcttcacagtttcttgtcgagtcctcacgagaccttcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caacgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaacgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagcttttcttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KT152148.1/1-7564 |Norovirus Hu/GII.P4_GII.4/Minerva/2006/USA, complete genome +---cgtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tct-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aggtggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcaaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattacccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgagacgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgtgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaaacgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccgaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagccggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctctaatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cgcacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KM245075.1/1-7496 |Norovirus 13-Z-2/2013/GII.Pe/GII.4/Sydney nonstructural protein gene, partial cds; major capsid protein gene, complete cds; and minor structural protein gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgat---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgcttccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtg--------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM258128.1/1-7560 |Norovirus 12-BA-1/2012/GII.Pe/GII.4/Sydney, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgttgaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatacttttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaagttggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagaccttaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagctggtgccc +tacaccacctaaggtgtgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaggtac---t +acgaggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggcgtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacgggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatctcttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaatatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccataacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------ccttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------cttttt +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KM258129.1/1-7560 |Norovirus 12-CG-2-4/2012/GII.Pe/GII.4/Sydney, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgcccccttacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttttcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacagggaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttctgatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcagggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ttcttt +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KM258130.1/1-7559 |Norovirus 12-AY-1/2012/GII.4/NewOrleans/2009, complete genome +----gtgaatgaagat---ggcgtctact-gacgcttccgctgccgctgttgct------------atcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacgccagaactagtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgattcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggtgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttacttggcgactacgagctacaagggtctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggcgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcttccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctagacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgccctccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +cgcat---------tgtaatggctggagctttctttgctggattggcatctgacgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccagaaagttgaatttgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KM258131.1/1-7559 |Norovirus 12-AY-2/2012/GII.4/NewOrleans/2009, complete genome +----gtgaatgaagat---ggcgtctact-gacgcttccgctgccgctgttgct------------atcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacgccagaactagtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgattcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggtgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttacttggcgactacgagctacaagggtctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggcgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcttccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctagacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgccctccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +cgcat---------tgtaatggctggagctttctttgctggattggcatctgacgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccagaaagttgaatttgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LC066046.2/1-7545 |Norovirus Hu/GII/JP/2015/GII.Pe_GII.4/Osaka/OSF78 POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, complete cds +-----tgaatgaagat---ggt----------cgcttccgatgtcgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aaa---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccagcagccatcagcctcgccaaggtcgagctggcaccgctctctttgttctg +gagacctgtatacacccccc---agtacctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgctttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattgaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctctcaacatccttaatattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +gtcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtaatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgcgacagaattgagaacaa +aggaaaagtctttgacagtgatgccataattatcaccaccaacctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaaaaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacaggatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaggagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaaccgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccagggaagtgagggagaggccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagcaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacactccctgtcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcactccagatatagatatcactatgatgctgactat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctctcccctagcgtgatggatgtaggtgacttt +caaataacaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggtctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attcttaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgacttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattacgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcgtgcttacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +ttatactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgaatgtaagcttcataa +atcaggttatgtcacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaacaacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggttacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggaacggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcgct---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctct------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctag +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtc------------------------------------------------- +------------------------------------------------------------------------ +- +>KM036379.1/1-7146 |Norovirus Hu/GII.P22/GII.5/Taoyuan/12-BB-4/2012/TW nonstructural protein gene, partial cds; major capsid protein gene, complete cds; and minor structural protein gene, partial cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------c----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggtctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagaactcactcccctctccctatactg +gagaatagtctacactccac---cttacctgatagccccagaaaccctaaggaagctccacggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---cagaaaatttgtgtcaaggacaacgggtttctacagaccctaccaagagtggaatagaaagccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggatctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggaattgtggaggctttcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccctgaggacatcgcggttga +agtcgtaccggtgatcctcggcggcataggtatggtacttggattcaccaaagaaagaattggccggttgtt +gagctctgccgcttcctcacttagagcatgcagggagatcggcaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccagaattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccgacccgggatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgatcagagagtggggctcgtgccgaggaatggtgt +tgaccattgggacgcatataaaggagagaggatcgtgctctgggacgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgccccctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcatcaccactaatttggccaatcctgctcctctagattatgt +caactttgaggcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcaaccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaagacgctaa +ccacacactcactcattgcccgcgccacgggcctcctacatgagagattggatgaatttgacctgcagggac +ccgagttgcccgtgtacaattttgaccacaacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaagcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgatctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccagaccaacaacgagctcaattccgccc +tcaacaatctgcgcggtgccagagtgagatactatgttaaatgtgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacttcaagaatgacacggaggttga------acgtcagcagcatttggg +ccagaccaga------------aaaaca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---attggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacataccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggaccggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtcttccgtccgaccaggaaacaacgcaaggaagagagggcaactctgggactggtcacaggtagtgaaa +taaggaagaggaacccagatgacttcaaaccaagaggaaaattgtgggccgatgatgaccgcagtgtaaact +acaatgagaaaatagattttgaagcgcctcccagcctttggtctcgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacataggagtggagagttctgtaaaatgaggttccccaaagctata +agacctgatgtctcaggcatgatccttgaggaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccgctggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgctcctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagagaggtaatgactgggtggttataggggtgcataccgcagcc +gccagaggtggcaacactgtgatttgtgccactcagggtccagacggtgaggccacgcttgaggggagagac +aaccacgggacttactgtggggcaccaatacttggaccaggaagtgcaccaaaactcagcactaagactaaa +ttctggaggtcatccaacgccccactcccgcctggcacttatgagcccgcttacctaggcggaaaagaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagccgccacggccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcaggtcattgac +ccaccccaaaaatggtcttatgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgacaactggaacggagagtccttcaccggtgtgttggctgaccaagcttccaaggca +aatctcatgtttgaacaagggaaacacatgcaacctgtgtacactgccgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatctgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtacaagtaccattatgatgctgactac +t-ctaggtgggattcaacccaacagagacatatcttgggggctgcccttgagataatgg-ttaggttctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aagatcaccataaatgaaggtttaccctctggagtgccgtgcacatcacaatggaactcaatttcccactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaattaactaacaagttg +aaggagtatggactgatcccaacaagaccagacaagacagaggggccactcataatcaaagagaaccttgat +ggcttgacctttctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +attatgagacaattgttttggaccaaggggcccaaccatgacgatcccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcattgctgggggaggcagcattacacggaccagttttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaagaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggctatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggaattaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gattatcgatgttagaaccttagaacctgtactgctcccaatgcctgatgttagaagcaccctattccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctctacacccctcttcgttctaatggctc +tggtgatgacgttttcactgtctcatgtaggatcctcactaggccctctcctgaatttgatttcacatactt +ggtaccaccaacagtggagtcaaagaccaagccattcacactacctgtgctgacattgggagaattgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagttgttaggcacaacccaactgcaagcatgtaacatttgttccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaat-----------------ccagcaaac--------agg-----------gctcatgatgctgttgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caacgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ttgaatgaggtcgcca---atggccatcgatttgaacagtggaccttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgtctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtcgccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggttatttcagatt +tgattcttgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagcttttatagcaggtttagcgggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaatagacaa--- +------------------------------ttgcagcaaaattcttttaatcatgataaggaaatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcattagattggagtggc +actaggtattgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------aaccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagtgccagctctgtgtcttct--------- +----------ggtagg-------actaattt------cacaaattctactcaatcaact---------gttg +ttggcacttcctcagtaa--------------------------------cac------------------c +ttctaggggttcttctgctccctctactctatcaagggctacaaccagaacttccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------acggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacct---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM036380.1/1-7435 |Norovirus Hu/GII.P16/GII.13/New/Taipei/13-BA-1/2013/TW nonstructural protein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +--------------------gcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatgg---agaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggaatctctggcctgcccgagctcacaacagtccctcaacc +ggatgtggccaacacggcattcagtgtcccaccgctgagtttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacactgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcatagggaaaattaagccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggagtagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcctttacttggagactacgagttgcaagggccagaagaccttgctgttga +gctcgtacctgtagtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggaaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagttagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaggacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtggttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataatcacaacaaaccttgccaatccagctccacttgactatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaagcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacacatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgatcgcccgtgcatcaggcttactgcatgagaggatggatgaatttgagctccaaggcc +ccacagtcaccaccttcaattttgaccggaacagaatcgctgcattcagacaattggctgcagaaaacaagt +atggattggtggacaccatgagagttggcaaccaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaacgtgatcatcaagaggtgccggatcatctacggcggctccacgtatgaccttgaatctgatg +gcaaaggcagagttctggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctattatac +aaatcgccggcgctgcgtttgtcaccacacgcatagtacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacatactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggagatcaaaatccgtcaga +ggatcttccgtcccaccaggaagcaaaggaaggaagagagggtcacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggctgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agatcagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatgggaacacacgcaaccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacgtatgagcctgcctatctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccatttaccgagcccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattagcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggatgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtatcactatgatgcagattac +t-cccgctgggactcaacacaacagagggcagtgctagcagcagccttggagatcatgg-tcaggttctctg +cagagccacaatt-ggcacaaatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcagtggaattccatcgcacactgg +ctgctaaccctctgcgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgaggggcccctgatcatcagtgaggatctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaagttggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatcgaa---tgatggtgcagctagtctcgtaccagaggccattaatga +gactatgccattggaacccgttgctggcgcatctattgctgccccagtggcgggacagactaacataattga +cccctggataagaacaaattttgtgcaagcccctaatggagagtttacagtatcaccgagaaattcccctgg +agagattctattaaatttagagttaggaccagacttgaatccttatttggcccatctatcaaggatgtacaa +tgggtatgctggaggtgttgaggtgcaagtgcttcttgctgggaacgcgttcacagc---aggaaagatatt +atttgcagcaatcccacccaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggacattggaacctattatgatacccttacctgatgttaggaatgtgttctatcattt +taataatcaaccccaa---cctaggatgagattagtggctatgctctataccccattgagatctaatggttc +aggagatgatgtctttactgtgtcttgtagagtgttgactaggccaacccctgattttgaattcatttacct +agtgcctccctctgtagagtccaaaactaaaccattcacacttccaatattgaccatttctgaactaaccaa +ctcccgg---tttcccatcccaattgagcaactgtacacggccccaaatgagaataatgttgtacagtgtca +aaatggaaggtgcaccttggatggagagcttcagggcaccacccagctgttatcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggcta----------- +-----------acagtgg------------------------------------------------gg---- +-------acaatt----------------------------------gggac-------------------- +-------cagaatttgctccagttgacctacccaagcggtgcaagctatgaccccactgatgaagtaccagc +acccttgggcacccaagatttcagtgggatattgtatggggtgttaacccagg---acaatgtaagtgaggg +taca--------ggggaggccaaaaatgctaag--------gga-----------gtatac---------at +atccaccaccagtggaagattcaccccaaaaattgggacaattggattgcatt---------ca---ataac +tgaaaatgt---gcaccccaatcagcaatcac---------------------------ggttcacccccg- +--------ttggagtcgctc---agaatgaaaacaccccc---------ttccagcaatgggttctaccaca +ctatgcaggtgct-ctcgct------ctaaacaccaatttggcacccgctgttgccccgactttccctggcg +agcaattactgttcttcaggtcccgtgtcccatgt--gttcaaggtctgcgg------gggcag-------- +-gatgctttcatagattgtctcctacctcaagagtgggtgaaccatttttatcaagaggctgctccctccca +agcagacgttgccctcatcaggtatgtcaaccctgatactggtcgcacgctgtttgaggccaaattgcacag +gtcaggttttattactgtatcacacactggtaactaccctcttgtggtccccccgaatggtcatttcaggtt +tgattcttgggttaaccaattctactcactcgcccccatgggaactggcaatgggcgtaga---------ag +agttc---------aataatggcaggagcatttatagctggtctagctggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgagttttgattacaataaacaactc +caaaatg---------------------------------catcctttcaacatgataaggaaatgttgcag +gcccagattgatgctacaaagaagctccaatcagaaatgattgcaattaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagccagaggggcagtcaacgccccaatgactcgagtgttggattggtcaggg +acacgctactacgctccaaattctgtgcaaaccaccagttattctgggcaattcaccccctcg--------- +cc--------------------------------------------------------------------ag +tccatcg----------------ggcgcaggtgaagtc---------------------------------- +------------------------------------------------ccct------------------tc +caattcat-----------ctcag------------cggactgcagctccaagca----------------- +----gtatccgcagcc-----tgtcaaccca------atcaacttcttt----------agg--------ct +ccacctcct----ctggggggtcctctacaacctcc----------------t------------------c +tagttc---------------------------------------gaggacagcagactgggtgcaacaaca +aa---gggctcttagcccgtacatgc---agggagccctgcagacggcatacgtcacaccgccgtctagtag +ggcttcc---agta------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggtttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LN854565.1/1-7511 |Norovirus GII/Hu/NL/2012/GII.4/Groningen, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgtcaccgcaaaatcttcaagtgaca---------------aaatgctttccagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaggtagtggtt +tcttacagtg----------ccaa---aaatggcgtttccggtttgcctgagctttccactgtcaggcgacc +ggaagaacacaacacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccgtt +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatcgctccagacaccctcaagaaattacacaatgaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +cagacccataaaggacataataggaaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgcagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggcgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcgaacgaactggctatagtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcctcgcctgacatcgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaagacccaccttgctag +agaggtggctaagaaaatcgcagcctctctcacaggagaccaacgtgtgggcctcatcccacgcaatggtgt +cgatcactgggatgcatacaagggggagagggttgtcctatgggacgactatggaatgagcaatcccatcca +tgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgacgtcatcatcatcactaccaatctggccaacccagcaccactggactatgt +caattttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgctgaagcccctgaggtcgaaaaggtga +aacgtgatttcccgggtcaacctgacatgtggaaaaatgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacggaaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggttgctccatgagagattggatgagtttgaactacagggcc +cagcccttgccaccttcaactttgaccgcaacaaagtgctcgcctttaggcagcttgccgctgaaaataaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaacaatgccagaactcaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgcatggtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagtgaacagagttcagagcaccaccgtacagaccaacaatgagctagctggcgctc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggaagggtgcccgaaaatcaga-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaaaaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcgaccgaggaagacttctgcgaagaggaggaggccaagatccggcaga +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatatggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcatacctcaaggcgcaaaggagttcttt +ggagtccctgtcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcggctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgtcggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagcgagggggaagccacacttgaaggtggtgac +agtaaaggaacatactgtggtgcaccaatcctaggcccagggagtgctccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcacccctcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggaggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaactattattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctaatgtttgaggaagggaagaacatgaccccagtctacacaggtgcacttaaagatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaaacacattgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccctatcatcttcgagaagcattccaggtataagtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagctgctctagaaatcatgg-taaaattttcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccatgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacgaatttgtccccagacattgtacaggctaactctatcttt +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgacttttctgcggagaaccgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaaacaatgatcccacactct +caaagacccatacaactgatgtccttactgggagaggccgcactccatggcccaacattctacagtaaaatc +agcaaattagtcattacggagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatataattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggacctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---tggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taatcagtcaaatgac---tctactattaaattgatagcaatgttgtatacaccacttagggctaacaatgc +tggggatgatgttttcacagtctcttgtcgagtactcacgaggccatcccctgattttgattttatattttt +ggtaccacccacagttgagtcaagaactaaaccatttactatcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgccttcgttgtccaaccaca +aaacggcagatgcacgactgatggcgtgctcttaggcaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcaccaaca----------- +-----------ttcaagg------------------------------------------------tt---- +-------cccaca----------------------------------cttacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaactccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggacaaggctcgacc--------cgt-----------ggccataaagccacagt +atacactgggagtgcctcctttactccaaagctaggcagtgttcaatttagaa---------ctgatacaca +aaatgattt---tgtaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgttatccaggatggtgacaccacccaccgaaatgaaccccaacaatgggtgctcccaaa +ttattcaggtgta-aatacc------cataatgtgcacctagcccctgctgtagctcccaccatcccgggtg +aacaacttctcttcttcaggtccagtatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctagtcccccaggaatgggtgcagcacttctaccaggaggcagctccagcact +atctgatgtggctctattgagatttgtgaatccagacactggtagggtcctgtttgagtgtaaacttcataa +atcaggctatgttacagtggcccacaccggccatcatgatttggtcatccctcccaatggctattttaggtt +tgattcctgggttaaccaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggctactaaaaagttgcaacaggaaatgatgaaagtcaaacaagcaatactcttagaaggt +ggattctctgcaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggttttggactggaatgga +acaaggtattgggcccctgatgctaggaccacaacatacaatacaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagaattcc------------------------------ +------------------------------cacccccgctcgggcttcctct------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctataa-----gttcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagttgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctt +acactcataggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>LN854566.1/1-7559 |Norovirus GII/Hu/NL/2014/GII.4/Groningen01, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagtcc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ctc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggttctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcaaaggaggagct +ttccagcaggccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacgtgccccctcactctaaactgtgacaggattgaaaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgaccgcaataaggtgctcgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaattcaaagcgccgccgtacagaccaacaatgagctggctggtgccc +tacaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaataccgaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtatcttcaagacagaggcaaatac---t +atgaggaggtggccatcgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaga +tcaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggctcctccaagcatctggtcgagaatagtcaactttggttcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgcgattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaagaccct +agagtcaagggtggcccttcactacagcaagtcatgagggagcagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgtgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacattgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +ctgctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tccttttatggtgatgatgaaattgttagcacagacataaaattggatccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgataaaactgaaggacctctcgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattttacagcaaaatc +agcaaattggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtaccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccacttagctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tgggaagatcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aatagtagatgttagacaactagaacctgtgctgattcccttacccgatgtcaggaataatttctatcatta +caatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaagccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgttagccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcatgctcactcaaa------------------- +-----cc-----acaagggcagatggttcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccgg- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggttatgttacagtggctcacactggtcaacatgatttggttattccccccaacggttactttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctcttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcatt---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggtccctcc------------------ag +caaatttt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------gc +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatgg---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LN854567.1/1-7559 |Norovirus GII/Hu/NL/2014/GII.4/Groningen02, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaagaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttatagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaatcaacacggcgttcagtgtccccccactcaaccaaagggagaacagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggccttat +acttggtgtgcacaagccaccggcagccatcagccttgccaagatcgagctaacaccgctctctttgtactg +gagacctgtgtacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgcaccttgtctgcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatcctcaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatctttaatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtagagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaagaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaacgctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcgacctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgatcactgggacgcatacaagggcgaaagggttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaatcgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttgctccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccaccttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggatgatggacacaatgagagttggaaaacagctcaaggacgtcaagtccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggagcgctagaatcagatactatgttaagtgcgttcaggaggcactgtattccatcatcc +aaatcgctggggccgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatgaccaacacagatggttgcctaaaacccaaa-- +-gat----gatgagg---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaaacacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagaggaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagagactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaaa +agaccaactggagagctcatgcctctggcagccaggatggggacccatgcaaccatgaaaattcaggggcgc +acagttggggggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaaggtacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaacagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacttccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaatatgactccagtctacacaggcgcacttaaagatgagttggtaaag +accgacaaagtttatggtactatcaagaagaggctcctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcgcactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccaggtagttgcagaagaccttctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctatcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacatagagttgaacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatcactgaagacctgaat +ggcctgacattcctccggagaactgtaacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcagacaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggtgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtggtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttttatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaaccaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacaggtcccagcagtgactttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgtacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaaccccagc +ccctctaggaactccagactttgtggggaagattcgaggcatgctcacccaaa------------------- +-----cc-----acaagggcagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtaccaccacccaccgaaatgaaccccgacagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtacatctagcccctgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtttgctcccccaggaatgggtgcagttcttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggcccacatgatttggttattccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacgctcgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacagattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcagtgctcctagagggt +ggattttctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +taaatctt-----------ctaac------------tcttttactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccat------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LN854568.1/1-7550 |Norovirus GII/Hu/NL/2014/GII.6/Groningen, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagccaa---aactctgtcaac +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +taaagttggttttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agtagtga----------------tcagcactgccccttagttaagattgggaccaagacattgacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgtg +cagtttgatg----------cgaagtcggaaacagtgcgcgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacaccgtccccccattgagtgaaagggagcacaggccagccactgaaccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactctgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcaataagcctcgcgacgatagagctcacacccatatccctttattg +gaggcccgtttacaccccca---actatctggtctgtccagacacgttgaaaggccttgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggagaagcatctctaggactaccggcttcttcaagccatatcagtcctggaacaggaaacccct +tccaaccgttgatgatggaaagatcaagaaggtggccaacgcaattctctgtgcacttggatcactgttttc +aaaaccaatcaaggacctattgggcaaactcaaaccattgaacctgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagtcatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagtttcatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactacgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccctaagggcgattgaggatgccgt +cctggacatggaagctataggaaataaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctagatctagaagaggagaaggcaaggaagctgtccaccaagtcatcctcgccagacatcgt +cggcactattaatgccatactggccagaatagctgctgccaggtccctcttgcacaaggctaaagaagaaat +gtttagcaggatcagacccgtggttgtcatgatctcgggtagacctggcattggtaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtaggactcgtcccacgcaacggggt +cgatcattgggacgcctacaggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggatcgagaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaactga +ctctagccccacagggtggatttgacaagaatggcaacaccccgcatggtaagggcactatgcgatccctaa +cccagggttccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcaactccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagactatgagagtgggcacagcgcttaagagtgtcaagaccttggaggatctgaaagttg +cactgagggatgtgaagttcaatgagtgtgagataatttacagaaactccaaataccgagtctcttctaatg +gtaaaggttctgtctctgttgacaaagttgaggaccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtttacactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtggcccaaggca---gatgggagattgagcccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctaagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggatcgctat---t +atgaggaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacgaagaaacagaggaaggaagaaaggggggtgcttggtttggtcactggctcagaca +tcaggaagagaagaccagacgattttcaaccgaagggtaacctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggcgcctccgagtgtctggtcgagaatagtcccattgggcactggctggg +gcttctgggtctcat-caaacctcctgatcacaacaacacacgtcctgcctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaatccataagtctggagagttctgcaggttcaggttcccgagaccaatt +agaccagatgtcacagggctcgtgttggaggaaggcgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggcagg +accgtcggtggccagatgggaatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcggca +gcccggggaggcaacactgtcatatgtgccactcaaggacaagatggggaagcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaatcttgggtccaggcaaggcgcccaaacttagcacgaagaccaag +ttctggcgctcatcaccagacgccttgccgccaggcacttatgagcctgcctacttgggaggtaaggacccc +agagtggaaaaaggaccatctctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaggccaaaaagacagtgatgaatgttctagagcaaaccattgac +cctgctaagccgtggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcacttaaagatgaactagtcaaa +actgacaagatctacaagaagataaagaaaaggctcttatgggggtcggatcttggtacaatgatcaggtgt +gccagggcctttggcggtctcatggatagcatgaaggcaagttgcatagccctcccatgtagggtggggatg +aacatgaatgaagatggtcccatcatatttgacaaacattctaagtataggtatcattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaggtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacccagccaactagatgttggcgatttc +gtcatctcagtccaggagggtctgccatcaggggttccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcaatggcagaagtgtcgggtctctcaccagatgttgttcaagcccactcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggcctggtccccactcgacctgacaaaactgagggtcccctcgtaataactgaagacctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagattca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggtccctcattcc +cagcgggctacacagcttatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcattagtgagatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacgtgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaccagtga +ggttatggcacttgagccggtggtgggagcctcaattgctgctcctgtcgtcggccaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaaggaactcacctgg +tgagatgcttctaaatcttgaattaggccctgagctcaatccttatctgagtcacttgtcccgcatgtataa +cggctatgctggtggtatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgtcccaccacattttcctgttgagaacattagtgcagcccaaattacaatgtgcccccatgt +aattgttgatgtgagacagcttgagccagtgcttttgcccctccctgacataaggaatagattctttcatta +taatcaggaaaatacc---ccccggatgagacttgtggctatgttgtatacaccccttagagc---aaattc +tggtgaggatgtgtttacggtgtcttgcagagttctgacccgccctgcccccgactttgagttcacgttctt +ggtgccaccaactgtggagtcaaagactaagccctttacactccctattttaactcttggtgagctatccaa +ctccaga---ttccccgctccgatagacatgttgtacactgaccctaatgaggcaattgtggtgcaaccaca +aaatggcaggtgcactctagatggaacacttcaagggaccacccaactggtacccacccaaatttgctcctt +caggg-----------------------------------------gcacgctaattagccag--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagcccca--------cgggtgagga----------------accaccct----------------- +----------ctccacgttcagctgaagaacctcgatgggacaccatatgacccaacagatgaggtgccagc +agttttgggtgccatagacttcaaaggaactgtgtttggggtcgctagtcaaa---gaaacaccacagggag +-----ct---ctatagga---------gcaacc--------cgc-----------gcccatgaagtgcatat +agataccacaaaccctagatatgccccaaagcttggctctgtgttgat---gt---------attctgaatc +tactgattt---tgatgatggacaacccaccc---------------------------gcttcaccccca- +--------ttggcatgggagccg---------------------atgattggcaccaatgggaattacccga +gtattctggtcac-cttact------cttaacatgaatttggcccccgcagttgcccctgctttccctggtg +agcgcatcctcttcttcagatcagtggtgccat------ctgctggtggcta------tggat--------- +--caggtcacatagattgcctcatcccacaggagtgggttcagcatttttaccaggaggccgctccatcaca +gtctgcggtggctctcatcagatatgtcaaccctgacactggaagaaacatctttgaggcaaaactgcatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagttgtgcccccaaatggttacttcaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcagg---------ag +agttc---------aataatggcaggagcatttttagctggattggtaggtgacgccataacaagtggtgtc +gggtccctaatcaatgctgg---ggccaatgcaattaaccaaaaggtagagtatgattttaataaacag--- +------------------------------ctccaattggcatccttcaaacatgacaaggagatgttgcag +tcacaagtactggccactaaacagctccagcaggaaatgatgaacataaggcaaggggtcttgtccgctggc +ggcttttcccctacagatgccgcgagaggtgctgtgaacgcgccgatgacaaaaattttggattggaatgga +acaaggtacttcgccccaaatagtatgaagacaaccagttattcggg-ccagttttccagcaaccctgtaca +ta-----------ggcaacccacttcaccc---cgttctgaccc---------------------------c +ccaa-------------------aaatcaaggttaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagttctgcatcttctgctccttcac----------------- +---------------------aatcaaccca---ctcaacggctttgactg-------cggg--------gt +ctagctc----a---tctag-------------------gacaacatcctctt---------ctgcagctgc +ttccac-------------------tct--------------atctagaaccagtgactgggtgagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcaa +ggcttca---tcat------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaatacccataggcagcctctcttcgctc +atgtgcgcaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttt------ct-ttcttctt---t---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LN854569.1/1-7579 |Norovirus GII/Hu/NL/2014/GII.21/Groningen, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aaaagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattatctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagtgacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaggcaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacggaccaatcatt +tcttacaacg----------tcaa---agggggtgtttctggtttgcctgagctctcaactgtcacccaact +tgaagagaactctacagcattcagcgttccccctcttagtcagagggagaacagagatgcaaaggaaccatt +gactgggaccatcctggagatgtgggacggggagatctatcattatggcttatacgtagaacgagggttagt +gctcggtgtacacaaaccaccagcagccatcagccttgctaagattgagctggcccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttatacagcctttgacaacaactgttatgccttctgctgttgggtgcttgacttgaacgattcatggct +gag---cagaaggatgatacaaaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctatgtgctctctcatcattgttcac +aagaccaattaaggacattattgggaagttaaaacccctaaacattctcaacatcttagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttactgggtgattatgaactacagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaagatgct +ttcttctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaaattggt +catgaaatggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcggt +gctagaccttgaagccattgaaaacaaccatatgacagctcttctcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgagaaaactttccaccaagtctgcctctccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggagct +gtcaagcaggccccgaccggtcgttgtaatgatttcagggaaaccgggtatagggaaaacccatctagctag +agagttggcaaagaagatcgcctccacactcacaggtgaccagagggtgggtcttatcccacgtaacggggt +cgaccactgggatgcatataaaggtgaaagagtcgttctctgggacgactacgggatgagcagccctgtcca +cgacgccctcagacttcaggagctcgctgatacctgtcctctcacactcaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgtcataataataaccaccaatttggccaacccagcaccactggattatgt +caactttgaagcttg-ctcgagacgcatagacttcctcgtctatgctgatgctcctgaagttgagaaggcca +agcgggacttcccaggccaaccagacatgtggaaagacaccttcaaacccgacttctcacacataaaattgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggagtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcagggctcctccacgagagattagacgagtatgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggtcttgttgacacaatgagggtcgggtcacaactcaagaatgtcaaaactatgacagaactcaagcagg +ccctcaagaatatctcagtcaagaaatgtcagcttgtgtacggtgggggcacatacacacttgagtctgatg +gcaaaggcaatgtgcatgtcgaaaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggttt +tgcaccatctcaggtgtgctagaatcaggtactatgttaagtgtgttcaggaagctctctactccatcttac +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcacga------acatacaaaacctctggt +ccaaaccacaagcagaagatctagagga--------gactaacaacgaggtgggttgtccaaaacctaaa-- +-aat----gatgaag---aatttgtcgtctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgagtata +agagaatcagggaagagagaaatggtaagtactccatagaggaatatctacaggacagagacaaatac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaga +ggatatttagaccaacaaggaaacaacgcaaagaggaaagagcttctcttggtttggttacaggctctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcgacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccgaaaccaatc +aggacagatgttacaggcatgatcttggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccaggatgggcacccacgccaccatgaaaatccagggtcgc +gctgttggtggacagatgggcatgctactcacagggtctaacgctaagagcatggatttgggcacaacccct +ggcgattgtggttgtccctatatctacaagagggggaatgactacgtggtcattggagttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaacccaaggaaacgagggtgaggccatgctagaaggtggtgac +aacaagggaacttattgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccactcccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagagaccaactaaaaccattcactgagcctagaggc +aaaccacccaaaccaagtgtgctagaagctgccaagaagactataatcaatatgcttgaacaaacaatagac +ccacctcaaaaatggacatacgcacaagcgtgtgcatcactagacaagaccacttccagcggtcaccctcac +cacatgcggaagaacgattgctggaacggggaatctttcacaggaaaactggcagaccaagcatcaaaggcc +aacctaatgtttgaggaaggaaagaacatgactccagtatacacaggggctctgaaagatgagctagtcaag +actgacaagatctatggggaggtcaagaagaggctcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgagctcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatatttgagaaacactccagatacaaataccattatgatgcagattac +t-cccgctgggactcaacacaacaaagagcagtgctagccgcagccctggaaataatgg-tcaaattctcac +cagaaccccacct-ggcccaggtggttgcagaagaccttttgtcccccagtgtgatggatgtgggtgacttc +aggatatcaatcaacgagggattgccctctggtgtcccttgcacttcacaatggaactccattgctcactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtcccctgacatcatccaggcgaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagacatcaaattagacccagagaaattgacagcaaagctg +agggaatacgggcttaaaccaacccgccccgacaaaacagagggacccttaattatctctgaagatttgaat +ggcctgaccttcttgcggagaacagtgacccgcgatccggccggatggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaaggggccaaaccatgaagacccctttgaaacaatgataccacactcc +caaagacccatacaactgatgtcattacttggtgaagctgcattgcatggtccatcattctacagtaaagtc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcccccagaaattcccctgg +tgaagttcttcttaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccccaactttccaattgacaatttaagtgcagcacagatcactatgtgcccacatgt +gattgtagatgtcagacagttggaaccagtcaacctcccgatgcctgacgttcgcaataacttctttcatta +taatcaagggtctgat---tcgaggttacgcctaattgcaatgctatatacacctcttagagcaaacaattc +tggggatgatgtttttactgtgtcttgtagagtgctaactagacctagtcctgacttctcattcaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttctccctccctatcctgactatttctgaaatgtctaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaatattgttgttcagtgcca +aaatgggcgcgtcacccttgatggtgagttgatgggcaccacccaactcttgcctagccaaatctgtgcttt +caggg-----------------------------------------gagttctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataatctaaatggaaccccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccgtggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ttgataccacgact--------agg-----------gcacatgaagcaaagat +agacaccacatctggccgcttcaccccaaagctaggctcattagaaatatcc------------actgaatc +tagtgattt---tgatcaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggagttgacca------------tgaggcagactttcaacaatggaccctacccga +ctacgctggtcag-ttcaca------cacaacatgaacttagcaccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacatttgccat------cttctggtgggcga-----tcta---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagagtcagccccctctca +gtctcaagtggccctggttaggtatgttaaccctgacactggtagagtgttatttgaggccaagctacacaa +attgggtttcatgactatagccaagaatggtgattctccaataattgttcctccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggggcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---agctaatgctattaatcaaacaattgatttagaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaagttacaggctgacatgattgctatcaagcaaggggtcttgaccgctggc +ggcttctcccctactgatgcagcccgtggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagacactgggcaccaggtgccacctccacaacctcgatgtcgggtggctttaca-catca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggctcccaaatccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttatcagatcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctga---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacatatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaacacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ttt-taa--------------------attt-g--------gt-tt-aaattaggtttaa-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +------------------------------------------------------------------------ +- +>LN854570.1/1-7516 |Norovirus GII/Hu/NL/2014/GII.2/Groningen, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------actagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcactttcaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaagcaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggaattaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgacatagtggta +tcctacagtg----------ccaa---agatggagtctccggcctgcctgagctatccaccgtcaggcagcc +gggtgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggctccatcttggagatgtgggacggagagatctaccactatggcttgtacgtggagcggggcttggt +gcttggggtgcacaaaccaccagcggctgttagccttgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaactctcaaaaagctacatggagagacatt +cccttacacggcctttgacaacaactgttacgccttctgttgctgggtcttggacctaaacgactcttggct +cag---caggaggatgatacagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggccaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggatataataggaaaactaaggcctttaaacatacttaatatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagtttactggacaccccc +agatgtgtctgcgttgatcgcccccttgctaggcgactacgaactacagggacctgaagatgtcgctgtaga +actcgtaccagtggtaatgggggggataggtttggttctaggtttcaccaaggagaagattggtaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggtgcatatggattggaaattctgaagctaat +catgaagtggttcttcccgaagaaagaccaggtaaatgagcttgcaatggtgaggtccattgaggacgcagt +actagacctcgaagcaattgaaaacaatcacttgaccaccctgctcaaagacaaagacagcttagcaaccta +catgaagactctggatcttgaggaagagaaagctaggaaactctccaccaaatccgcttctcctgacattgt +gggcacaatcaactcacttctggcacggattgcagctgcccgttccctggtgcatcgggcaaaagaagagct +ttctagtaggccaagacccgttgttgtcatgatatcaggaaagccagggatagggaagacccaccttgccag +ggatttggcaaagaaggttgcggccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggacgactatggaatgagtaatcccattca +tgacgcccttaggctccaagaactcgctgacacttgccccttaacactaaattgtgatagaattgagaacaa +agggaaggtctttgacagtgatgtcataattatcacaactaatctggctaacccggcaccactggactacgt +caactttgaagcatg-ttcgaggcgcatcgacttcctagtgtatgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttaaatctgacttctcacacataaagttga +tgttggctcctcagggtggttttgacaagaacggcaacaccccacatggaaaaggtgtcatgaaaactctca +catctggctccctcgttgctcgtgcttcaggactcctccacgaaagactggacgagtacgagttacaaggac +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttagacagctcgccgctgaaaataagt +acgggctgatggacaccatgagagtggggagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cacttaagaacatttcaattaaaaggtgccaaatagtttacagtggtctcacatattcacttgaatctgatg +gcaaaggtaatgtgaggattgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacatcatctgagatgcgctaggattagatattatgttaagtgtgtccaggaagctttgtattccatcatcc +aaattgctggagccgcgtttgtcaccacgcgcattgcaaagcgcataa------acatacaaaacctctggt +ccagaccacaggtggaagatgaggaaga--------gaccaccagcaaagacgggtgcccgaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +aatctggccgtggcaagaaacacacagccttctcgagtaagggccttagtgatgaggagtacgaagagtaca +agagaatcagagaagaaagaaatggcaagtactccatagaagaatacctccaagacagagacaagtac---t +atgaggaggttgccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcggcaaa +gggttttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacctaaaggaaagttatgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaagcccccccaagcatctggtcgagaatagtcaactttggatcgggttggg +gcttctgggtctcac-caagtctctttataacatccacccacgtcatacctcaaggggcacaagagttcttc +ggtgttcccattaaacagatccaaattcataagtcaggtgagttctgccgactaagattcccgaagccaatt +agaactgatgtgacaggtatgatcctggaggagggggccccagaaggcactgtggccacactgctcataaag +aggccaactggggagctgatgccactggcagctagaatgggcacccatgcaactatgaagatccaaggtcga +accgtcgggggacagatggggatgctcctgacaggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatatatctacaaaagaggaaatgactacgtggtcatcggagtccacacagctgcc +gcccgcggtgggaacactgtcatctgtgcaactcaaggaagtgagggcgaggccgtacttgaaggtggtgac +aacaaaggcacctattgtggcgccccaattctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggtacatatgaaccagcttacctcggaggcaaagacccc +agggtaaaaggtggcccctcattacagcaagttatgagagaccaattgaaaccgttcacagaacccagaggt +aagccaccaaaacccagtgtgttggaagcagccaaaaagacaatcatcaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatcccttgataaaacaacctctagtggttacccgcac +cacgtgcggaagaatgaatattggaatggagaatctttcacagggaaattggctgatcaggcttcaaaagct +aacttgatgtttgaagaaggaaaacacatgacaccagtctacacgggagctctcaaagatgagttagtcaaa +actgataaaatatatggtaagatcaagaaaaggttattatggggttcagatctggcaaccatgatccgttgc +gctcgagcgttcggagggttgatggatgagctcaaggcccactgtgtcacactccccatcagggtggggatg +aacatgaatgaggatggtcccatcatttttgaaaaacactctaggtatacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgtcttagctgcagctctggagatcatgg-taaaattttccc +cagaaccacacct-agctcagattgttgcagaagatctcctgtctcccagcgtgatggacgtgggcgatttt +aaaatatcaatcactgaaggactcccctctggggtgccttgcacttcacagtggaattccattgctcattgg +ctcctcacgctctgtgctctctctgaggtaacagatttagctcctgacataatccaagcaaactcactcttc +tctttctatggtgatgatgaaattgtgagcacagacattaaattagatccagaaaggctaacaaccaaacta +aaagaatatggtctcaaaccaacccgccctgacaagactgaagggcctctgattatttctgaggacttagat +ggtctgaccttcttgcgaagaactgtgacccgtgacccagcaggttggtttggaaaattggaacagagctca +atacttagacagatgtattggaccaggggccccaatcatgaggacccctttgaaacaatgataccacactcc +caacgacccatacagctgatgtccctactaggtgaagctgcattgcatggcccatcgttctacagcaaaatc +agcaaattggtcatatcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaataacga +gacgatggcacttgagccggtggctggggcctccatagctgcccctctaaccggccaaaacaatgtgataga +cccctggattagaatgaattttgttcaagccccaaatggtgaatttacagtgtccccccgtaattccccagg +tgaagtgttgttagaattggaattaggccccgaattgaatccattcctggcacacctttcaagaatgtacaa +tggttatgctggtggggttgaagtgcaggtgctacttgctgggaacgcgttcacagc---aggaaaactagt +gtttgcagcaatccccccacacttccctcttgagaatctgagtcctggtcaaattacaatgttccctcatgt +aattattgatgttagaactttagaacctgtccttttacctttaccagatgttagaaataacttctttcatta +caatcagcagcctgag---gcccgtatgaaacttgtggctatgttgtacactcctcttagatctaatggttc +tggtgatgatgtgtttacagtctcttgtagggttctcactcgcccttctccagattttgattttaattattt +ggtccccccaactgtggaatctaaaactaaaccattcaccctgccaatattgaccattggagaattgtcaaa +ttctagg---ttcccagtaccaatagatatattgtacaccagccctaatgaaggagtggttgtgcaacctca +aaatggcagatcaacactcgatggtgaactgcttggcaccacacaaattgtaccatcaaacatctgtgcctt +gcggg-----------------------------------------gg------------------------ +---------------------------------------------cgcatcaacgcccatgtgccaaac--- +---gaacccaatc----------------------------------aatggaac----------------- +----------------ttgcaggttacaaatgcaaatggaactccctttgaccccactgaagatgtccctgc +gccattgggcacgccggacttccaggcaaacatctacggagtcacaggtcaga---ggaa------------ +-----ct------------ctgacagctcttgc--------cgt-----------gcccatgatggggtttt +ggcaacctggagccctaaatttacacctaagctaggatctgtggtcttgggta---------cttgggaaaa +agaagattt---taatatcaatcagcctacca---------------------------gattcacaccta- +--------ttggttt------------------gcataatacagaacactttaagcagtgggttctacccaa +ttattctggaatg-ttgacc------ttaaacatgaatttggcaccctctgttgctcccctcttcccaggtg +aacaaatactcttctttaggtcctttatacca-------ctcaatggaggcaa-----atccg--------- +--acggtgccattgactgtctactccctcaggaatggatccagcatttctatcaggaatcagccccatcacc +cacagacgttgccctgattaggtacaccaatcctgacacgggccgcgtcctctttgaggccaaattacatag +acagggattcattacagtagcaagttctggttctaaacctattgttgtccctcctaatggttattttaggtt +tgattcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgtaga---------ag +ggtgc---------agtaatggctggagcttttgtagcagggcttgccggtgatatagtcaccaacagcatt +ggttcacttgtgaacgctgg---agccaatgcaataaaccaaaaagtggattttgaaaacaacaaacaa--- +------------------------------ctacagcaggcctctttcaaccatgatcaggaaatgttgcaa +gctcaaattcaggccacaaaacaactacaagctgacatgattgcgctcagacaaggggtgttgaccgcaggc +ggcttctcccctactgacgcagcgagaggggcggttaatgcgcccatgacgcaagtcttggattggagtggg +accaggtactgggcccccggagccacaaaaacaactgctttctccggcgggttcacaagctcc--------- +cc-------------caataccaggactattg---tgc---------------------------------c +taagaaa----------------acatcagccacaccagcctcc---------------------------- +------acatctgtgtc--tagacctagttctc--ttgcttctactgcttctacccgctcaacatttgttag +cgggactt--------------------------------ctagcctttcttcttcga-------------- +----------ctagga-----gctcttttaa------------ttc---------------------ccagc +ccacctc--------------------------------------------ct------------------c +ttcttc---------------------------------------tcggactagcgaatgggtgcgtagtca +aaacagggtgctggagccctacatga---ggggatcgttacaaactgctttcgtgacgcctccctctagtag +agcctcc---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaagttttgga-ctcctggacatctgtgt------------tcaacacccacagacaaccgcttttcgctc +atctccgtcggagaggggagtcaca--------ggtttag--t-----------gaaaagatga-------- +-------ttt-ttctt----t-------------ctattc--------tt-tt-----------tgaaatt- +--------------tct---gtctttta-------------------------------------------- +------------------------------------------------------------------------ +- +>LN854571.1/1-7559 |Norovirus GII/Hu/NL/2012/GII.4/Nijmegen01, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctatcattatggtctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaagcgtt +cccctacacggcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggacgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggtgttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggcttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacactcgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacgtacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcgccacttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gat----gacgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggagaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggatcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgattttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacccttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaatctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttctttagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaagcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----c------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>LN854572.1/1-7513 |Norovirus GII/Hu/NL/2012/GII.4/Nijmegen02, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctatcattatggtctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaagcgtt +cccctacacggcctttgacaacaactgctatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggacgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaggataaggcctcttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggtgttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggcttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacactcgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggagagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaacttgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacgtacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcgccacttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gat----gacgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggagaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggatcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgattttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaatctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagagattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttctttagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggagtgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttccttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaagcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KR083017.1/1-7527 |Norovirus Hu/GII.17/Gaithersburg/2014/US nonstructural polyprotein (ORF1) gene, partial cds; and major capsid protein VP1 (ORF2) and minor capsid protein VP2 (ORF3) genes, complete cds +-------------------------------------------ccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgttacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacagaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccactgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagcagcaaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagagccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctctggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacgctgagggtcggcaaccaactgaaaaatgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataaggtactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattagagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacatgtcataccaaaaggaatcactgaggccttt +ggagtgcctataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +aggccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcagtgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacgatcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggtccatctctgcaacaagttatgagagaccaacttaagccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcctgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgataaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtggttagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccgctcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttctttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctatcaatcttagaa---------ttagtgacaa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaattaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaatttccctggtg +aacaattgttattctttagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaactccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tacactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaaccaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---gtcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KR232647.2/1-7259 |Norovirus GII strain Hu/EC/2011/GII.P23-GII.23/Quininde1906 polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------ccacccccaaatgg------tgaggacatagtcatcaag +tataccaaac----------aagg---ggatacagtcagcggagtgcccaccgtctccactgcagacatatc +cccattgcatgacaccgcatatagtgtcccccccttggaccagagggaaaaggtggacgcaaaagaacccct +aactgggtcaatacttgagatgtgggatggtgagatctaccattacgggctctatgtggagagagggcaagt +tctcggtgtgcacaaaccaccggctgctgtgagcgttgcacgcatcgaactgacccccctctctctatactg +gagaacagtttacacacctc---cctacctggtggctcctgacacccttaagaagctccacggtgagacatt +cccctacacagcatttgataacaactgctactcattttgttgttgggttctggacctgaacgactcgtggct +caa---tagaaaattcgtgtcaaggaccacaggcttctacagaccctaccaggagtggaacaggaaaccatt +gccaaccatggacgaaggaaagcttaagaaggtggccaacgtcttcctgtgtggcctgtctgggcttttcac +caggcccatcaaagatctcataggcaaactgaaaccactgaacatccttaacattgtcaccaattgtgattg +gacgttcccgggagtcgtagaggcgatcatcctcctcgcagagctcttt---gggatcttctggacaccacc +agacatatctgccttcgtcgcctctctgttaggtgactatgagatgcaaggccccgaggacattgcgaccga +gatagtcccagtcattctaggtggtattggcatggtacttggtttcactaaagagaagatcggccggctgct +gggttccgcggcatcatcactcagggcctgcagggaaatcggcaactatgggatagaggtggtaaaattggt +gatgaaatggttctttccaaccaaaagtgaggtcaatgagatggaaatggtcagaacaatagaggacgcagt +gctcgactttgaggcaattgaaaacaatcacatgacagctctactcaaagacaaaaatagtctggccacctt +cctcagggcactggatatggaagaagagaaagcgcgaaaactttcaaccaaatccgcgtcccccgacatagt +cggcactataaatgcactcctggcgagaattgccgctgctaggtcactggtgcacagggctaaggaagagat +gtcatcaaggatgcgtcctgttgtcatcatgatatccgggcgacctgggatagggaaaacccatctggcccg +cgacctagctaagaaaatggcagccactctgtcaggtgatcagagagtgggcctggtcccaaggaatggtgt +tgaccattgggatgcatacaagggagaaaggatcgtcctgtgggatgattacggtatgagcaaccccgtggc +agacgccctccgactccaggaactcgccgatacatgccccctgacactcaattgtgataggatagagaacaa +aggaaaggtctttgacagtgacaccctgatcatcactactaatctggccaacccggcccccctggactatgt +gaactttgaagcttg-ctcacgccgcatagatttccttgtttatgcggactctccctcagttgataaggcaa +agagagacttcccaggccaaccagacatgtggaaagacgccttcaaaccagacttctcacacataaagctac +aactggcaccacagggaggatttgacaagaatgggaacaccccacatgggaagggcgtcatgaaaacactaa +ccacacactccctcatagcccgtgccactggtttactccatgagagattagatgaatttgacttacagggtc +aagaattgccagtctacaacttcgaccagaacaaggtggccgctttccggaaactagcggctgacaacaagt +atggtctcatggacactttgagggcaggcaacaaactgaaggaggttaagaatctagaccaattcaaggaag +cggtgaaggacatccgcataaagccttgcaggataatctacaactcaatggcttatgatctggattcaaatg +ggtcaggcagagtcaatgttaagaaagtgggagaccaaagggtccaggccaacaatgaactcaactccgcac +tcaacaaactgcgcggggctagaatcagatactatgtgaagtgcttccaggaaatggtctactcccttctcc +agattgctggtgcggccttcgttacatcaagaatggcacaaagaatga------atgtcaacaagctgtgga +caaaaccaga------------aaaaca--------acaggaggcctctgcagggccccccaccccccca-- +--------actgaag---agtggaccataacaccaatgaacacggtccaggaaggtaagaagggcaagaaca +aaagtggtaggggtaagaaacacactgcattctctagtaagggccttagtgatgaggagtatgatgagtaca +aaagaatcagggaggagcgccaagggaagtactccatagaagaatacctccaggacagggaccggtac---t +atgaagaattggccatagccaaagcaacagaggaggacttctgtgaagaggaggagatcaagataaggcaaa +gaattttccgcccaaccaggaaacagcgtagggaggagagagccactctaggccttgtcacaggcagtgaaa +ttagaaagaggaaccccgatgatttcaaaccaaaaggaaaactgtgggctgatgatgaccgtagtgtcaact +acaacgaaaggatagactttgaagcccctcccagcctctggtccagaatagtcaacttcggttcgggttggg +gcttctgggtctcat-caaatttgttcatcacctccacacacgtcatcccacaaaacatgtctgaggctttc +ggggtaccaataagccaaatccaaatacataggagtggagagttctgcaaaatgaggttcccaaaggccatc +aggcccgatgtctctggcatgattcttgaggaaggcgcgcctgaaggcacggtggtgaccatattgatcaaa +agaccaactggtgaactcatgccattggcagctcgcatgggcacccacgccaccatgaaaatacaggggagg +atgattggaggtcaaatggggatgcttctcacaggatccaacgccaaaaacatggaccttggcaccgtgcct +ggtgattgtggctgcccttatgtctacaaaagaggcaatgattgggtagttatcggggtgcacaccgccgcc +gccaggggtggcaacacggtgatctgtgccactcaggggccagatggtgaagccacacttgagggtggcgac +aaccatgggacctattgtggcgcgccaatattaggtccaggaaacgccccgaaactcagcaccaagaccaaa +ttctggaggtcctccaacactccgctcccccctggcacatacgaaccagcctacctcggtggtaaggaccca +agagtcaagggcggcccatcactacaacaagtcatgagggagcaactcaagcccttcactgccccacgtgga +aaaccaccaaggccagcggttttggaggccgctaaggaaaccatctgcaatgtgctggagcaaaccattgaa +ccgccccaaaagtggtcctatgcacaggcttgtgcttccctagacaaaacaacctcaagtggccacccccac +cacaagaagaaaaatgacaattggaacggggaaaccttcactggtgttctggctgatcaggcttcaaaagca +aacctcatgtatgagcaagggaaacacatgcagcctgtgtacacaggcgcgctcaaagatgagcttgtcaaa +accagcaagatctatgaaaccattaagaagagactcttgtggggttcagacctcggcacaatgatacgctgt +gccaggtcatttggtggtctcatggatgaaatgaaggcaaactgtgtgaacctaccagtcagagttggcatg +aatatgaatgaagatggtcccataatctttgaaaagcattcaaagtacagatatcactatgatgctgactat +t-ccaggtgggactcaacacaacagagatgtgtcctgggtgctgcacttgatataatgg-ttaggtactcag +ccgaaccagaatt-ggcacaaatcgtggctgaggacttgctgtcgcctagcgtcatggacgttggcgacttc +aaaatcaccataaatgagggcttaccatcaggagttccgtgcacatcccagtggaactcaataactcattgg +ctgttaacactctgtgctatgtcagaagtctcaggactgtcaccagatgtggtacagtcaaattcatgcttc +tccttctatggggatgatgaaatagtcagcactgacatcaaattggacccccaaaaactgactgacaagttg +agagagtatggcttaattccaactagacccgacaaaacagaaggaccacttataatcagagagagtctagaa +ggcctaacattcttaaggagggatgtgtgcagagacccagcagggtggtatggcaaacttgaccaatcctca +atcatgagacagttatactggacaaaagggcccaaccatgaggaccccaatgaaacaatgatcccacattcc +cagaggccagtgcaattgatgtccctacttggtgaggcggccctacacggaccgacattctataagagagtt +agcaagttggtcatcactgaattaaaggaaggtgggatggatttctatgtgcccagacaagaacctatgttt +agatggatgagattctctgacttgagcacgtgggagggcgatcgcaatctggctcccgaaagtgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagagatcaacaacga +gacaatggctttggaaccagtggcaggaggagcaattgcagccccactaactggacaaacaaatttcattga +tccctggattagaggtaattatgtgcaagcaccaaatggtgaatttacagtgtcccccagaaattcgcccgg +tgaaattttgcttaatttagaattaggccctgaactcaacccattcttgtcccatctatctagaatgtacaa +tgggtatgctggcggtattgatgtccaagtcatcatggcaggcaatgccttcaccgc---tggtaagattat +ctttgcagcaatacctccccacttccccgtggaaaatcttagtccccctcagatcactatgttccctcatat +tatagtggatgtcaggacccttgaacccataaacatccctgtaccagatgttaggaacaacttcttccatta +taatcaaaacaatgag---tctcgcatgagactggtggccatgttgtacacccctcttaggtctaatgggtc +tgctgaagatgttttcacagtgtcatgtagggtcttaacaaaaccatctgcagactttgaattcaattatct +agtccccccaactgtagagtcaaggactaaacccttcacaataccaatactcacaattggggaaatgacaaa +ttcaaga---ttcccagtgcctattgacatgcttcataccagtccaacagaaaacattgttgttcaaccaca +aaatggcaggtgcaccatagatggtgagttgcttggcaccactcaactgatcacttccaatatctgttcatt +cagag-----------------------------------------ggtccatctcag-------------- +------------ggcatgaggg--------------------------------------------ca---- +----atgatgacc----------------------------------aacacctg----------------- +----------tggcacttcaacatcacaaaccccaatggcactccatttgaccccactgaagatgtgcctgc +ccccctcggaaccccagatttcaggggtcaattgtacggtgtcatctcccagc---gagatagagagggaac +accctcg-----gaaaacaatcagaaggcaaac--------agg-----------tcccacgagggggtgat +ttcaacaatctcaccaaaatttgtccccaagttaggttcagtcatgattggca---------catggactac +tgacgatat---caa---gaaccagccatcca---------------------------agttcaccccaa- +--------ttggc------ctcaatgatgatg------------ataattttaaacaatgggaactgccaaa +ttattctggggcg-ctcacc------ctcaacatggggttggcacctagtgttttccccacctaccctggtg +aacaagtccttttcttccgctcctatctgccaa------tgaagggagggta------cggta--------- +--gtccatttattgactgcctagtacctcaagaatgggtcgctcacttctaccaggagtcagcacccgcaca +aacagatgtggccctaattaggtatgtaaaccccgaaacaggacgtgtccttttcgaggccaaattgcacag +acaggggtttattaccgttgccaagagcggcgacagccccatcaatgtgcctgccaatggttattttaggtt +tgattcttgggttaatcagttttactctcttgcccccatgggaactgggaacgggcgcaga---------ag +gattc---------agtaatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +gggtctctagttaatgcagg---agctaatgctattaatcagaaaattgattttgagaataataaatat--- +------------------------------ttccaaaatgcatcatttgcccatgataaggatatgctgaat +gcacaggttgaggcgaccaagaaacttcaggctgacatgattgccatcaagcaaggggtattagtcgcgggc +ggcttttcccctactgatgcagctcggggagcaatcaatgcccccatgacaaaagttctagattggaatgga +acaaggtactgggcgccaaatgccacctccaccacttcaatgtcaggtggcttcacagga------------ +ca-----------ggtttcgcacaggaccacaccaaat---------------------------------t +ttaaaac----------------caaccaggcccccaagccccca--------------------------- +-------------------------------------------------cct---------------agtag +tggttctt-----------cagta------------aggtccaactcaacccaactcactagt--------- +----------ctgagc-------tcccactc------ctctgggtcatctcgatctagcggatcaacagtgg +ttagctctt------tgc--------------------------------ctt------------------c +ttctag---------------------------------------caggactagggattgggtcaatcaaca +aaatctcaatttggaatcacatttgc---ctgggtctctcagaacagcttttgtcactccaccatctagttc +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcctaa +gggtgttttgga-ctcctggacatctgcat------------tcaacacacgcagacagccgctttttgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KR020503.1/1-7511 |Norovirus Hu/GII.17/41621/Guangzhou/2014/CHN polyprotein gene, partial cds; and VP1 and VP2 genes, complete cds +------------------------------------------------------------------------ +-------------------------aaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccgccccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ttcc---------------------------aacccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccaaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcctatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtgatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacactgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggtaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgctgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattaaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctacaccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttctgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttgttcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctcgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaatctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taaactc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ctaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>KP998539.1/1-7570 |Norovirus GII.17 isolate GII/Hu/HKG/2014/GII.17/CUHK-NS-463, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagtgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcacagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccctgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatgggttggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccccgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgattcgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacattccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaacttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttcttctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaattgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccctgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------aaaaaaa------------------ +------------------------------------------------------------------------ +- +>LC043139.1/1-7545 |Norovirus Hu/GII/JP/2014/GII.P17_GII.17/Nagano7-1 POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, complete and partial cds +----------------------------c-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gtttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagagtgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttttggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaagttggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctacttc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaagggggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaagcacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattttgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgcggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctttccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacgcaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccgtctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagatataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgttcccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactggaaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaactgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaaaa-------------a--aaaaaaa--------------- +------------------------------------------------------------------------ +- +>LC043167.1/1-7534 |Norovirus Hu/GII/JP/2013/GII.P17_GII.17/Saitama5203 genomic RNA, nearly complete genome +----------------------------c-gacgcctccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacacccccc---agtatttgatagctccagaaactcttaagaacttgggtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataacggatgcacttataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaga +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaagaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaggggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaactaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcatacctcggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacgacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgagtccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgt +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacattccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgctctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttatcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtaaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacaatgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttataccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgacacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcgcatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagcccttttatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttc------------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC043168.1/1-7535 |Norovirus Hu/GII/JP/2013/GII.P17_GII.17/Saitama5309 genomic RNA, nearly complete genome +----------------------------c-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaagtcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctacttc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagctcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaacggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC043305.1/1-7535 |Norovirus Hu/GII/JP/2014/GII.P17_GII.17/Nagano8-1 POL, VP1, VP2 genes for nonstructural polyprotein, capsid protein VP1, capsid protein VP2, complete and partial cds +----------------------------c-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gtttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagccttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgttatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagagtgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttttggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtacccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaagttggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccgtgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctacttc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaagggggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggtcggggcaagaagcacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagagaaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattttgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgctgtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgcggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaacctttcacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaagactcctgtggggttctgacctttccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacgcaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccgtctggcgtgccttgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagatataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgttcccaaattaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgttaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactggaaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaactgacaaatt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>LC037415.1/1-7555 |Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308 genomic RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaagcgaca---------------gcttgtttgctaacat +gtctgtcacttttaagaaag----ccctcggggcgcggtctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +tcc-----------------------------acccccacccaatgg------cgaggatgaaccagggata +gtgtacaagg----------tggg---agagggtgtgtctgggctgcccgacctaacaactgtggtacaacc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattcttgaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +gctcggagtacacaaaccacctgctgcaataagccttgccaaaattgaaataacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagatccaggaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgtgatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcaaaccttatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgtcctatgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatatactggcaacctgcgattg +gacttttgcaggcatagtggaatccttgatccttcttgctgaactcttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtgatgggaggaataggtttggtgttaggattcaccaaagaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaatcacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgatatcgt +gggtacaataaacgcattattggctaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctggccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactggtacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggtcctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctaaattgtgataggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacattgagaaggcta +agcgtgacttccctggccaaccagatatgtggaaagaccatttcagaccagacttctcacacattaagcttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtggtgaagtccctga +cgattggttctctgatcgccagggcctccggcttgctccacgagagaatggatgaattcgagctccaaggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacattgagggtcggcaaccaactgaaaagtgttaagaccctggatgagctgaagcagg +ccataaagaacatcagtatcaagaagtgtcagatagtgtataatggatgcacctataccatggaatctgatg +ggaggggcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcgc +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatatcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacagaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtggaagggaagaagggcaagaaca +agtctggccggggcaagaaacacacagccttctcttccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaggaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatt +agaccagacgtgagtgggatgatcttggaagagggcgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggtgactgcggatgtccatacatatacaaaaggggcaatgaccttgtggtcattggggtgcacactgcagca +gctcgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaagacaaaa +ttctggagatcctctaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcttagagtcagcaaagaagactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacaggaaaacttgcagatcaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaaaatcaagaaaagactcctgtggggttctgacctctccacaatgatccgatgc +gccagagcatttggtggtctcatggatgaattcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagatggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccttgcacctcacaatggaattctattgcccattgg +ttacttaccttgtgtgccctttctgaagtgacaggattaggtcctgacatcatacaagctaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaagctc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgttggtgattagtgaggacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +caaagacctgtgcagctcatggcactactaggagaatcttccctacatggaccctcattttacagcaaggtt +agcaaattagtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaataatataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactctcctgg +agaaattttattaaatttagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccggcccagatcacaatgctcccacattt +aatagtagatgttaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +tagtaaccagcctaac---agccgcatgagattagtggctatgctctataccccactcagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaaaactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---tttccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgtacacttgatggtgagttacaaggcacaacccagttgctcccaactggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcac----------- +-----------aaat---------------------------------------------------ta---- +-------accaac----------------------------------gtgaca------------------- +--------ggtggcacatgcaactgcaaaacctcaatggtacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttgggatggtaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------aga-----------gcccaacaggcgtgggt +ttcaacctatagcccccaatttgtccccaaattaggttctgtcaatcttagaa---------ttagtgataa +tgatgattt---ccaatt---ccagccgacaa---------------------------aattcacaccag- +--------tgggcgtcaatgatgacgatgatg---------gccacccgttcagacaatgggaactaccaaa +ctattcaggggag-cttacc------ttgaatatgaatcttgcccccccagttgctccaaattttcctggtg +aacaattgttattcttcagatctttcgtgccat------gctcaggaggtta------caacc--------- +--aaggtattatagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcaccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggacactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggggctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctcccttgtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgagggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggatccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcgcccaattccacaaagacaactggctattcgggacaattcacctcttca--------- +cc--------------tgtgcatatgtctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcctcttcttctagc------------ag +t--gtcta-----------tagta------------tg-------tatactcaatctactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctccacaaaattgacaagtt +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacggcagagtgggtaaatcaaca +gag---aagtcttagccctttcatga---gtggcgcacttaacatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ct-aaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KM272334.1/1-7558 |Norovirus Hu/GII.4/gg-12-08-04/2012/KR, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagatcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaaccctcgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttgtcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccgctggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccagcaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagagactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaagtccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacttaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaacgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgctaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacagcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccggt +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaaggggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggctcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---g-a-a-t-tgat-----ta-----t------ctttc------------c-----t--------ttcttt +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>KF944110.2/1-7548 |Norovirus GII isolate Hu/GII.P16-GII.3/Novosibirsk/Nsk-N1659/2011/RUS, complete genome +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccatctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctaagcctgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctgtaagcatggcaaaagtggagctgacgcctttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgattcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtgcctgtggtgatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaacaatcacatgacaactttgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgtcatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtttacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatggaaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcatttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaattcctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggtaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattcttggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacatgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggtatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaagttggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtgccatgcacttctcagtggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttccttcggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggcgcagcgatagcagcaccccttactggtcagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagattacaatgtgtcctcatgt +aattgtagatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +taatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtacactccccttagggcaaataattc +tggggatgatgttttcactgtgtcatgtagggtgttgactaggcccagtcctgacttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttcaccctccctattttgaccatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggcgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgatcaagctgacgcagcaacccct----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactagacaacctaaatgggaccccgtatgaccctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggatacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccagaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacccga +ttattccggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacattagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaactaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcatagagct---------acaccaaattttaaaaccaaccaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------caggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacacctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tatttag--t-----------gaaaaga----------- +---t-t-att-ctta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atcttttaaa------------------------------------------ +------------------------------------------------------------------------ +- +>KF944111.3/1-7554 |Norovirus GII isolate Hu/GII.P16-GII.3/Novosibirsk/Nsk-N1648/2011/RUS, complete genome +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccatctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtggggtctctggcctgcccgagctcacaacagtcccccaacc +ggatgtggccaacacggcattcagtgtcccaccgctaagcctgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatatatcactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctgtaagcatggcaaaagtggagctgacgcctttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgattcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaatatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtgcctgtggtgatgggagggattggtctggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaggatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaacaatcacatgacaactttgctgaaagacaaagacagcctagcaaccta +catgaaaacactggacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccccgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgtcatgatatctggcaaaccagggataggaaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccattgggatgcatataaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagccccacttgattatgt +caactttgaggcctg-ctccaggagaattgacttcctggtttacgccgaggcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatggaaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaataagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccggatcaggtactatgtcaaatgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcatttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggcccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaggaggaggtcaaaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaattcctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +aggccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggtaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattcttggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacatgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggc +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggtatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaagttggcagaccaagcatcaaaagca +aacctaatgtttgaggaagggaaacacatgacaccagtgtatacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggaaagatcaagaagagactgctctggggctctgatttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtgccatgcacttctcagtggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttccttcggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcaataatga +ggcaatggcgctagatccagtggcgggcgcagcgatagcagcaccccttactggtcagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaactcccctgg +tgaagtacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---agggaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagattacaatgtgtcctcatgt +aattgtagatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttcttccatta +taatcaaggttctgat---tcgaggttacgcttaattgcaatgttgtacactccccttagggcaaataattc +tggggatgatgttttcactgtgtcatgtagggtgttgactaggcccagtcctgacttctcattcaatttcct +cgtcccgcccactgtggaatcaaagacaaaacctttcaccctccctattttgaccatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggcgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgatcaagctgacgcagcaacccct----------- +-----------agactct------------------------------------------------t----- +-----------ca----------------------------------actac-------------------- +-------tattggcacatacaactagacaacctaaatgggaccccgtatgaccctgcagaggacataccagc +tcctctggggacgccagactttcggggcaaagtctttggcgtagccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggatacaacatctggccgcttcaccccaaaattgggctccctagaaatatcca---------ct---gaatc +tggtgactt---tgaccagaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacccga +ttattccggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagttgcca------tcctctggcgggcg------gtcca--------- +--atggcattctagactgcctggtcccccaggaatgggtccaacacttctaccaggaatccgcccctgccca +aacgcaggtggctctggtcaggtatgtcaaccctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaatcccttttacacattagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaacactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaactaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggcttcacaggtcaa--------- +gc---------------------tgtgcatagagct---------acaccaaattttaaaaccaaccaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------caggactagagactgggttaaccaaca +gaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacacctgcgt------------ttaacacgcgcagacagccgctcttcgcac +accttcgtagaaggggggagtcaaa--------tatttag--t-----------gaaaaga----------- +---t-t-att-ctta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atcttttaaaaaaa-------------aa----------------------- +------------------------------------------------------------------------ +- +>KF920739.4/1-7580 |Norovirus GII strain Hu/GII.P16-GII.16/RUS/Novosibirsk/Nsk-N4740/2012, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +agg---------------------cccccaagaccaccaactcccgagttggtt-------aagagggtacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagagccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagttccccaacc +ggatgtggccaacacggcattcagtgtcccgccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaagcccct +gcccactatggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggagactacgagctgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +tctggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacactagacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaagagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaagtggcatccactctcacaggggatcaaagagtcgggctcataccaagaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgctgtgggatgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgacacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagtcataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtatgccgatgcaccagaagtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccactggttccctgattgcccgtgcatcaggcttattgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccgtaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaagaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaatacctctgtgcagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaagtgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccatcatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagccagaa-- +-gat-------gacg---agttcatcatatcttctagggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggaatatgatgagtaca +agaggataagagaagagagaaacgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttctgtgaggaagaggaggtcaaaatccgtcaga +gaatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactggggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaattggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtctccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaactactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggcggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcgcccattctaggccctgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacacctcttccaccagggacatatgagcctgcctatctcggtggccgtgacccc +cgtgttaagggtgggccctccttgcagcaggtaatgagagaccagctgaaaccattcactgagcccaggggt +aaacctccaaaaccaagtgtgttggaagcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +catgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaagagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagctggtcaag +actgacaaagtttatggaaagatcaagaagagactgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaagcacactgcatatcacttccagtccgagttggtatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatataagtaccactatgatgcagactat +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtgcaggcaaattccatgttt +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctaaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatctgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagctca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaagtc +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggttaacaacga +gacgatggcacttgaaccagttgcgggagcttcaatcgccgcccccttaactggtcaaaacaatgtaataga +cccctggattagattaaattttgtacaagccccaaatggtgagttcacggtttccccccgaaactcacctgg +tgaaattctgttaaatttggagttagggcctgaattgaatccatatttagctcatttggcaagaatgtataa +tggatatgcaggtggggtcgaggtgcaggtactgcttgctggaaatgcgtttacagc---gggcaaactagt +atttgcagcagtccccccccatttcccagtggacaatttgagccccggccaaatcactatgttcccccatgt +gattattgatgttagaacccttgaacctgttttgttaccattacctgatgtaaggaataatttctttcatta +taatcaacagaatgaa---tctcgcatgagacttattgccatgctttatacccctcttagatctaatggttc +aggcgatgatgtcttcactgtgtcttgtagggttttaaccagaccatcccctgattttgattttaattattt +ggtccctccaacagttgaatctaaaactaaacccttctcagtcccagtgctgaccctcaatgagctgaccaa +ctcccgt---tttcctgtcccgattgatgccatgtacactagccccaatgacacaattgtggtccaacctca +aaatgggagagcaaccattgacggcgaattgcttggcacaactcaactcatccccagtggtatctgctcatt +tagag-----------------------------------------gaagaattacagcac----------- +-----------atctgca------------------------------------------------ag---- +-------atgaca----------------------------------gtcac-------------------- +-------ttgtggagcgtccaagtcaccaatctgaatggcaccccttttgatccaacagatgatgtgcccgc +tccattgggtatgccagacttttctggacaaatatttggggtgatcagccaaa---gggatacaggt----- +---------------agtaacaaccccgcaaac--------aga-----------tcccatgatgctgtggt +tccaacctacagtcccaaattcactcccaaactcggctcaatccaaattggaa---------cgtgggatac +caatgatct---ac---aaaaccagcctgtta---------------------------aattcacgcccgt +tggcctcaatgaaatt---------ggagatgacaaacat---------ttcgaccaatgggtgttaccaaa +ttattctggtgcc-ctagga------ctcaacatgcacctggctcctgctgtgtccccacttttccctggag +agagattgcttttctttagatcatacataccc------ctaaaaggtggcca------tggaa--------- +--acccatacattgattgccttgtgccacaagagtggatacaacatttctatcaagaatcagccccagcaca +atcctcggtggctctgctgagatatgtgaacccagacacagggcgcaccctatttgaggccaaattgcataa +ggaaggattcattactgttgctagcacagaaaacagacctgtagttgtccccccaaatggctatttcagatt +tgattcttgggtaaaccaattttactcactcgcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgccggtgacatcgtcaccaatagtgtt +ggctcacttgtgaacgccgg---agccaatgctataaaccaaaaagttgattttgaaaacaacaaacagcta +caacagg---------------------------------cttcctttaaccatgataaagagatgctgcaa +gcccaaatccaagccaccaagcagttgcaggctgacatgatttcaatcagacaaggggttttgaccgcgggc +ggcttctcccccactgatgctgcaaggggtgcagtcaacgcaccaatgacccaggtgttggactggaatgga +actagatactgggcccctggggcctcaaggaccaccagcttttctggtgggttcaccaacacc--------- +ac---------------------ccgtgccagaacagttgaaccacccaaaagttccccccctgctcacaat +actttag----------------cttctgtccctaggt--------------ctag---------------- +------------------------------ttctactgtttcatcttcttct------------------ac +tcgttcga-----------cagta------------attactagttcttccgctgccc-------------- +----cttctactaggt-----cttctattac------tagaaattcacc-----------cc--------gc +-------------------aatacttctcaatctgtctctt---------ccg------------------t +ttcttc---------------------------------------tcgcactagtgattgggtacaaaatca +aaacagaatgctggagccatatctga---ggggatctctgcaaacagcctttgtgtcaccgtcctccagtaa +ggcctct---agta------------------------------atggca---ctgtctcaactgtgccaaa +agaaattttgga-ctcctggacatctgcgt------------tcaacacccgcagacagccgcttttcgcac +acctccgccggaggggggagtcaca--------agcttag--t-----------gaaaagactt-------- +---t-g-att-ttcc-----tt------------tttctttc---------tt-------------tctttt +t-attgaaaatt-t--t---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>AB983218.1/1-7550 |Norovirus Hu/GII/JP/2014/GII.P17_GII.17/Kawasaki323 genomic RNA, nearly complete genome +----------gaagat---ggcgtctaac-gacgcttccgctgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggagaaatcttcaagtgaca---------------gcttgttttctaacat +gactgttacttttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +atacaaaa---------------accaccaaggccaccgacaccggaattggtg-------aagagaatacc +ccc-----------------------------acccccacccaatgg------cgaggatgaaccaaagata +gtgtataagg----------tggg---agagggtgtgtctgggctgcccaacctaacaactgtggcacagcc +tgacgcacaaaacacagcttatagtgttcccccacttagccagagagaagtcggcgaagctaaagaaccgct +gcctggctccattctggaaatgtgggatggtgagatctaccactatgggctgtatgttgagcgggggcatgt +actcggagtacacaaaccacctgctgcaataagctttgccaaaattgaattaacaccgctgtctctctactg +gagagtggtctacactcccc---agtatttgatagctccagaaactcttaagaacttgagtggagagacttt +cccatacacggcctttgacaacaactgtgatgccttctgttgttgggtcctagacctcaacgactcctggct +tag---caggagaatgatccaaagaacaactggattcttcagaccgtatcaggattggaacagaaaaccctt +accaaccatggatgaaccgaaaatcaagaaggccgcgaatgctgttctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattggaaagcttagaccactgaacattcttaatgtactggcaacttgtgactg +gacttttgcaggcatagtggaatccatgatccttcttgctgaactcttt---ggggtgttctggaccccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggccccgaagacctggccgtgga +acttgtgcccgtggtaatgggaggaataggtttggtgttaggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcgaccacacttagggcctgcaaggatctaggatcttatggattggagatactcaaattggt +catgaagtggttcttccccaagaaggaggaggctaacgaactagccatggtgagggccattgaggatgcagt +cctggatttggaggcaatagaaaacaaccacatgaccacccttctcaaggataaagacagcctggccacata +catgaggactcttgacttggaagaagagaaagcaaggaaactgtcaaccaaatcggcgtcacctgacatcgt +gggtacaataaactcattattggcaaggatagcagccgccaggtcactggtccacaaggctaaggaggagct +ctcgagcagacagagacctgttgttgtaatgatatcaggtagaccaggtataggaaagacccatctagccag +agagctagccaagaaagttgcgtcaacactgtcaggcgaccaaaggattggactgatacctagaaatggcgt +cgaccattgggacgcctacaagggagaaagggtggttctgtgggatgattatggtatgagcaaccctataca +ggacgcactgaggctccaagaattggctgacacctgtcctctgaccctgaattgtgacaggattgaaaacaa +aggaaaagtgttcgacagtgatgccataattataacaaccaaccttgcaaacccagcaccactagactatgt +caactttgaggcctg-ctctagacgcatagacttcttggtgtatgcagacgcacctgacatcgagaaggcta +agcgtgatttccctggccaaccagatatgtggaaagaccattacagaccagacttcacacacattaaacttc +agctggcaccacagggaggttttgacaaaaatggcaacaccccacatggcaaaggtgtagtgaagtctctga +cgattggttctctgatcgccagggcttctggcttgctccacgagagaatggatgaattcgagctccagggct +ctgacctgccaaccttcaattttgaccgcaacaaagtcgccgccttcagacaattagcagctgaaaacaaat +atggtcttatggacacactgagggtcggcaaccaactgaaaagtgtcaagaccctggatgagctgaaacagg +ccataaagaacatcagtatcaagaagtgccagatagtgtataatggatgcacctataccatggaatctgatg +ggaggagcaaggttgtggttgaaaaggtacaaaacgcaacagttcaaaccaacaatgaacttgtaggggcac +tccaccacctgagatctgcaaggataagatactatgttaaatgtttccaagaagccatttactctctactcc +aaattgctggtgcagccttcgtcacctcacgcatcgtgaggcgcatga------acatctcaaacctctggt +cgaagccacccatcgaggagggtgatga--------gcctgaagacaaaggaggatgccccaagcccagg-- +-gat----gaagatg---acctcactattgactctagagacattaaagtagaagggaagaagggcaagaaca +agtctggtcggggcaagaaacacacagccttctcatccaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagagaggagaggaatggcaaatactcaatagaggaatacctccaagatagggacagatac---t +atgaagagcttgccattgctaaggccactgaggaggacttctgtgaagaggaggagatcaaaatccgccaga +gaatcttccgacccaccaggaagcagcggaaagaggaaagggccacgcttgggcttgtcacaggatcggaaa +tcagaaagaggaatccagatgactttaaaccaaaaggaaaattgtgggctgatgacaacaggagcgtggatt +acaatgagaggatagattttgaggctcccccgagtgtttggtctaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctctttataacttcaacacacgtcataccaaaaggaatcactgaggccttt +ggagtgcccataaaccaaatccaaattcacaaatctggagaattttgccgcttgcggtttccaaagccaatc +agaccagacgtgagtgggatgatcttggaagagggtgcccctgaaggcactgttgtgtctattctcatcaaa +aggacaacaggggagctgatgcctcttgcagtcagaatggggactcatgccacaatgaaaatccaaggtaga +acggtgggtggtcagatgggtatgcttctcactggctcaaatgctaaaagcatggatctaggcacaacgcca +ggcgactgcgggtgtccatacatatacaaaaggggcaatgacttcgtggccattggggtgcacactgcagca +gcacgtggaggcaacacggtcatatgtgccacacagggaagtgaaggtgaagccactcttgaaggaggtgac +aacaagggtacctattgtggagcccccattttgggacctggcaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcctcaaacgcaccgcttcccccaggtacttatgaaccagcataccttggtgggagagacccg +cgcgtgaagggaggcccatctctgcaacaagttatgagagaccaacttaaaccttttacagagcccagaggg +aagccaccaaacccaaatgtcctagagtcagcaaagaggactatcatcaatgttctggaacaaaccattgac +ccccctcaaaagtggtcatatgcccaagcttgtgcatccctcgacaagacaacctccagtggatacccgcac +cacgtccggaagaatgactattggagtggtgaatccttcacagggaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaggaaggcaagcacatgcaaccagtttacaccgcagcactcaaagacgagctcgtgaaa +actgacaaaatttatggcaagatcaagaaaaggctcctgtggggttctgacctctccaccatgattcgatgc +gccagagcatttggtggtctcatggatgagttcaaagcaaattgtattacactccctatcagagttggtatg +aatatgaatgaagacggtcccataatatttgagaaacactccaggtacaggtaccactatgatgctgattac +t-cccgctgggactccacacaacagcgggcagtgctggaagcggcacttgaaatcatgg-tgagattttctg +ctgagccacagct-ggcacaaatagtggcagaggacctgctgtcaccaagtgtggttgatgtgggcgatttc +aaaatcgctatcaatgaaggcctaccatctggcgtgccctgcacctcacaatggaattctattgcccactgg +ttactcaccctgtgtgccctttctgaagtgacaggactaggtcctgacatcatacaagccaactccatgtac +tctttctatggtgatgatgagattgtgagcacagacataaaattggacccagagaaattgaccgcaaaactc +aaagaatatggccttaaacccactcggcccgacaaaactgaggggccgctggtgattagtgaagacctgaat +gggttgactttcctccgccgaacagtcacccgtgatccagcaggttggtttggaaagttggaccaaaactcc +atcctcaggcagttgtactggacaagaggacccaaccatgaagaccccagtgagaccatgataccacacgca +cagagacctgtgcagctcatggcactactaggagaatcctccctacatggaccctcattttacagcaaggtt +agcaaactggtcatatctgaacttaaagagggaggaatggatttttatgtgcccagacaagagtcaatgttc +agatggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgctggtctcgtaccagagggcaacaacga +gacccttcccctagaaccagttgcgggcgcagctatagccgcacccgtcactggccaaaacaacataattga +cccctggattagaacaaattttgtgcaagcaccaaatggagagttcacagtgtcacccagaaactcccctgg +agaaattttactaaacctagagttgggccctgatttgaacccttatttggctcatttgtcaaggatgtacaa +tgggtatgctggtggagtggaagttcaggttctcctggcagggaacgcgttcactgc---cggaaagatcct +cttcgccgccgtcccgccaaatttcccagtggaattcttaagcccagcccagattacaatgctcccacattt +aatagtagatgtcaggactcttgaaccaattatgatcccactccctgatgttaggaatacattcttccatta +taacaaccagcctaac---agccgcatgagattagtggctatgctctacaccccccttagatctaatggctc +aggtgatgatgtctttactgtctcttgcagggttttgactaggcctactcctgattttgagttcacttattt +agtgccaccttctgttgaatctaagactaagcctttttccttacctattttaaccctttctgagctcacaaa +ttcgagg---ttcccagtccccatcgattcgcttttcaccgcccagaataatgtgttgcaggtgcagtgtca +aaatggcaggtgcacacttgatggtgagttacaaggcacaacccagttgctcccatctggcatctgtgcatt +cagag-----------------------------------------gacgggtgacagcag----------- +-----------aaac---------------------------------------------------tg---- +-------accatc----------------------------------gtgaca------------------- +--------agtggcacatgcaactgcaaaacctcaatggcacaacatatgacccaactgatgatgtgccagc +cccgctgggtacacctgacttcaagggcgtcgtgtttggggtagcaagccaaa---gaaatgtgggt----- +------------aatgatgcgcctggctcaacc--------agg-----------gcccatgaggcggtgat +ttcaacctatagcccccaatttgtccccaagttaggttctgtcaattttaga------------agtaatga +taatgattt---ccaatt---gcagccgacaa---------------------------aattcacaccag- +--------tgggcatca---atgacgatggtg---------accacccgttcagacagtgggaactaccaga +ctattcagggctg-cttacc------ttgaatatgaaccttgcccccccggttgctccaaatttccctggtg +aacaattattattcttcagatcttttgtgccat------gctcaggaggtta------taacc--------- +--aaggcattgtagattgtcttattccccaagaatggatccaacacttctatcaggaatcagcgccctccca +gtcagacgtggccctaatcaggtatgtcaaccccgatacgggacgtacactgtttgaagcaaaattgcacag +atctggttacattactgtggctcactctggagactatcctcttgttgttccggctaatggatactttagatt +tgattcttgggtaaatcagttttactcactcgccccaatgggaactgggaatgggcgaagg---------ag +ggctc---------agtaatggctggagctttcattgcaggattggcaggcgacatgctcacgtcatctgtg +ggctccctggtgaacgcagg---ggcaaacgccatcaaccaaaagatagactttgaaaacaacaaacaa--- +------------------------------ctccagtctgcttcctttcagcatgataaagagatgctccaa +gcgcaggtgaaggcaaccaagcagctgcaatctgaaatgatagccctaaaacagggggttttggccgcaggc +ggcttttcccccactgatgcagcaaggggagccattggtgcacccatgacaaaggtgcttgactggtctggc +actcgatactgggcacccaattccacaaagacaactggttattcgggacaattcacctcttca--------- +cc--------------tgtgcacatgcctagcccaaat---------------------------------g +ctc-cac----------------aatcaaaacctgcaaagcctag--------------------------- +------------------------------gtctctagctccttcttcttcttctagt------------ag +t--gtcta-----------tagta------------tg-------tctactcaatcaactcatttaacat-- +----------ctggct-----cttctagtaa---------tgcttcttctgcctctacaaaattgacaaact +taagctc--------------------------------------tggctcct------------------c +tcaaaa---------------------------------------cagaacagcagagtgggtgaaccaaca +gag---aagtcttagccctttcatga---gtggcgcactcaatatctcacatgtcacgccaccctcaagtag +ggcttcc---agtt------------------------------ctggga---cggtctcgaccgtgcccaa +ggaagttttgga-ctcctggacgtctgcgt------------ttaacacacacagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaaat-------- +-------aat-tggcta---taat--gtg-----atttct-----------tt---------ttaaaattt- +--ggctaat----ttgt---atcttttaaaaa---------------------------------------- +------------------------------------------------------------------------ +- +>KJ196276.1/1-7491 |Norovirus GII/Hu/JP/2002/GII.P12_GII.13/Saitama/T80, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgtcgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacag +aga---------------------cccccacgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaaccagtggtt +tcttatagcg----------tcaa---agatggtgtttccggcttgcctgagcttatcactgtcaggcagcc +ggatgaagtcaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgcccaggaaccact +aactggaacaattctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtctagt +acttggcgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gaggccagtgtacacacctc---agtatctcatctctccagacactctcaggaggctgcacggagaatcgtt +cccctatacggcctttgacaacaattgctatgccttctgttgttgggtcctggacctaaatgactcgtggtt +gag---taggagaatgattcagaggacaactggtttctttaggccctaccaagactggaataggaaacccct +tcctaccatggatgattccaagttgaagaaggtagctaacgtgttcctgtgcgcgctttcttcactattcac +caggcccatcaaagacataatagggaagctgagacctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgtcccaatagtgatgggggggattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgcaaagaccttggtgcatacgggctggaaatcttaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggacgcggt +gctggacctcgaggcaattgagaacaaccacatgactgcccttcttaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaggagaaggccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgctcttctggcgagaatcgccgctgcgcgttccctggtgcatcgggcgaaggaggagct +ctctagcagaccaagacctgttgttgtgatgatatcaggcagaccagggatagggaaaacccaccttgccag +ggaattggccaagagaattgcagcttccctcacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccattgggacgcatacaagggagaaagagtcgtcctgtgggacgattatggaatgagtaatcccatcca +tgatgccctcagattgcaagaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaataa +aggaaaggtatttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagatgcccctgaggtcgaaaaggcaa +aacgtgacttcccaggtcaacctgatatgtggaagaacgcttttagtcctgacttctcacacataaaactga +cgctggctccgcagggaggcttcgataagaatggaaacaccccacatgggaaaggcgtcatgaaaactctca +ccactggctctctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caacccccaccaccttcaacttcgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaggt +acgggttaatggacacaatgagagttggcagacaactcaaggatgtcaggaccatgccagagctcaaacagg +cactcaagaatatctcaatcaagaggtgtcagatagtgtacagtggctgcacctacacgcttgaatctgatg +gcaagggtgacgtgaaagttgatagagttcagagcgccactgtgcagaccaacaatgagctggctggtgccc +tacaccatctaaggtgtgccaaaattagatactatgtcaagtgtgttcaggaggccctgtactccatcatcc +aaattgctggtgctgcatttgtcaccacgcgcatcgtcaagcgcatga------atatacaagatctttggt +ccaaaccacaggtggaagatacagagga--------gactaccaacaagaatgggtgcccagaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcatacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaaatactccatagaagagtaccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaggaagaagaagccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaggaggagagagcctctctcggcctggtcacaggctctgaaa +tcagaaaaagaaacccagacgatttcaagcctaaagggaagctgtgggctgatgacgacaggagtgttgact +acaacgagagaatcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagtctgttcataacatcaactcatgtcataccccatggcgcacaggagttcttt +ggggtttctatcaaacagattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggtgcgcccgaagggaccgtggccacattactcatcaag +aggccaactggggaactcatgcccttggcggccagaatgggaacccatgcaaccatgaagatccaagggcgc +actgttggaggtcaaatgggcatgcttctaacaggatccaacgccaagagtatggatctaggcaccacaccg +ggtgactgtggttgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacggctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggtggtgac +agcaagggaacctactgtggtgcaccaatcttaggtccaggcagtgccccaaaactcagtaccaagactaaa +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggtccttcattgcaacaagttatgagggaccagctgaaaccattcactgagcccaggggc +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgagcaaacaattgat +ccacctcaaaaatggtcattcgcgcaagcatgcgcatccctcgacaagaccacctctagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgtacgaagagggaaagaacatgaccccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaaaatcaaaaagaggcttctctggggctcggacctggcgaccatgatccggtgc +gctcgggcttttgggggcctgatggatgaatttaaggcacattgtgtcacactccccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgaaagacactccagatacaaatatcactatgatgctgattac +t-ctcggtgggactcaacgcaacagcgggccgtattagcagcagccttagaaatcatgg-ttaagttctccc +cagaacctcatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggatgtaggtgatttc +aaaatatcaatcaatgagggcctcccctccggggtaccctgcacctcccaatggaattccatcgcccactgg +cttctcaccctctgtgcactttctgaggtcacaaacctgtcccctgacattatccaggccaattccctcttt +tccttctatggtgatgatgaaattgtgagcacagacgtaaagctggacccagagaagctgacagcaaaactc +aaggaatacgggctgaaaccaacccgccctgacaagactgaggggccccttgttatctctgaggacctgaat +ggcttgaccttcctgcggaggactgtgacccgcgatccagctggctggtttggaaaactggaacagagttca +atacttaggcaaatgtactggactaggggccctaatcatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtctttgctgggcgaggctgccctccacggcccagcgttctacagcaaaatc +agcaagttagttattgcagaactaaaggaaggtggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgcagctagtctcgtaccagagggcattaatga +gactatgccattggaacccgttgctggtgcatctattgctgccccagtggcgggacaaaccaacataattga +cccctggataagaacaaattttgtacaagcccctaatggagagtttacagtgtcaccaagaaattcccctgg +agaaattttattaaatttagaattaggaccagatctgaatccttatttggcccatctttcaagaatgtataa +tggttatgctggaggtgttgaggtgcaagtgctccttgctgggaacgcgttcacagc---aggtaagatatt +gtttgcagcaatcccacctaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttaggactttggaacctattatgatacccttgcctgatgttaggaatgtgttctatcattt +taataatcaacctcaa---cctagaatgagattagtggctatgctctacaccccattgaggtctaatggttc +aggggatgatgtcttcactgtgtcttgtagagtgctaactaggccaactcctgattttgaatttatctatct +ggtgcccccttctgtagagtccaaaactaaaccattcacactaccaatattaaccatttctgaattgaccaa +ctcccgg---ttccctattccaatcgagcaattgtatacggctccaaatgagaccaatgttgtccagtgtca +gaatggcaggtgcaccttagatggagagctccagggcacaacccagctgttgtcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggccaataatg----- +----gggataattgg----------------------------------------------------g---- +-------accaaa----------------------------------atttgc------------------- +-----------------tccagctgacctatccaaatggtgcaagctatgaccccactgatgaagtgccggc +accattgggcactcaagattttagtgggatgttgtatggagtgttgacccagg---acaatgtgaatg---t +gagcaca-----ggagaggccaaaaatgctaag--------gga-----------atatac---------at +atccaccactagtgggaaatttaccccaaaaattgggtcaattggattgcatt---------ca---ataac +tgagcacgt---gcaccccaaccaacagtcgc---------------------------ggttcacccccg- +--------ttggagtc---gccgtgaatgagaaca---------cccccttccagcaatgggttctaccaca +ttatgcaggtagt-ctcgct------ctcaacaccaatttggcacctgctgttgccccgactttccctggtg +agcaattgctgttcttcaggtcccgtgtcccat------gtgtccaaggcctacaggggcagg--------- +--atgcgttcatagattgcctcctgccccaagagtgggtgaatcatttttatcaagaggcagccccttccca +agcagacgtcgcccttattaggtatgtcaaccctgatactggtcgcacgctgtttgaagccaagttgcatag +atcaggtttcattactgtgtcacatactggtgcttaccctcttgtagtccccccaaatggtcattttaggtt +tgattcttgggttaatcaattttactcactcgcccccatgggaactggcaatgggcgtaga---------ag +gatcc---------agtaatggcaggagcatttatagctggtttggccggtgacatgctgacttctgctgtt +agttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaacaaacaa--- +------------------------------ctccaaaatgcatccttccagcatgataaggaaatgttgcag +gctcaaattgatgccacaaagaaacttcaatctgaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagctagaggggcagtcaatgccccaatgactagagtgctggattggtcaggg +acacgttactatgctccaaattctgtgcaaactactagctattctggacaattcaccccctcg--------- +-------------------------------ccagtcc---------------------------------a +ccgggtg----------------caggtgaaat--------------------------------------- +------------------------------------------------------------------------ +--cttctt-----------ctaat------------tcatctcagcggaccgcagctccaag---------- +--cagcatccgtagtc-----tgtcaactca------atcaacttct-------------gt--------aa +caggctc--------tacctccctaggggggtcctct---gcaacctcct---------------------c +tagctc---------------------------------------taggacagcagactgggt---acagca +acagagggctcttagtccgtacatgc---atggagccctgcagacggcatatgtcacaccgccgtcaagcag +ggcctcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctgtttgcac +acctcaggaagaggggggagtcaca--------ggcttag--t-----------gaaaaggat--------- +-----------------------------------------gattaatgc-ttaagta--------tgatt- +---------------tt---attttcctttt----------------------------------------- +------------------------------------------------------------------------ +- +>KJ196277.1/1-7554 |Norovirus GII/Hu/JP/2001/GII.P22_GII.5/Saitama/T49, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctgccactgcgaccgctggcaaaaccagcacaaacagt +gtaattcac----aaccaagatgtaaattctacatctagc------------------ctctttgccaacat +gactgttggcctgaagaggg----ccctgggggcgagaccaaaacaacccgcccccagggttccttccccca +atagggagggaaaacatgaaaccactcctagagctccccccccgaacaagggaggaaa--ggctaacatccc +accaataccac--------------------ccccaccgcccaacgg------ggaggacatagtcatcaaa +tataccaaac----------agga---tgacgcggttgaaggggtgcccaccgtcgccacggttgatgttcc +ccccacacacaacaccgcttacagtgtcccccccctggatcagagggaaaagattgaagcgaaggagccctt +gacaggttcgatacttgagatgtgggacggtgagatctaccactatggcctctacgtggagaagggcttggt +tcttggtgtgcacaaacctccagctgccataagctttgcacgcatagagctcactcccctctctctatactg +gagaacagtctacactccac---cttacctgatagccccagaaaccctaaggaaactccatggggagtcatt +cccatatacagcctttgacaacaattgctactccttctgctgctgggtcctggacctgaacgattcttggct +caa---caggaaatttgtgtcaaggaccacgggtttctacaggccctaccaagagtggaacagaaaaccttt +gccaaccatggatgaaggaaagctcaagaaagtggccaatgtgcttctatgtggtctctctgggcttttcac +taggcccatcaaggacctcatagggaagttgaggccactaaacatactaaacatcatcaccaattgcgactg +gaccttccccggagttgtggaggctctcatactgcttgcagagctcttt---ggagttttctggacaccacc +agacatttccaccttcatagcttcacttctgggtgactatgaaatgcagggccccgaggatatcgcggttga +agtcgtaccggtgatcctcggcggtataggcatggtacttggattcaccaaagaaagaattggccgattgtt +gagctctgccgcttcctcacttagagcatgcagggagatcggtaactatgggatagaggtagtgaagctggt +gatgaaatggtttttccccaccaaagatgagacaaatgagatggatatggtgagggcaatagaggatgctgt +tcttgactttgaagccatacagaacaatcacatgacagcattgcttaaagacaaaaacagccttgcaacctt +cctcagggagctagatatggaagaggaaaaggcgcggaagctatcaacaaaatctgcgtccccagatattat +cggcaccataaacgcccttctagccaggattgccgctgctaggtccctagtccacaaggccaaggaagaaat +gtcatctaggatgcgtcctgttgtcatcatgatctccggccggcccggaatagggaagacgcatctggcccg +cgacctggctaagaagatggcggcgaccctctcaggtgaccagagagtggggctcgtgccgaggaatggtgt +tgaccattgggatgcatataaaggagagaggatcgtactctgggatgattatggaatgagcaaccctgtgac +tgatgcgctgcggctccaggagcttgccgacacatgtcccctaacgctcaactgtgatagaatagaaaataa +gggaaaagtgtttgacagtgacactataatcattaccaccaatttggccaatcctgctcctctagattatgt +caactttgaagcttg-ctcccgccgaatcgacttccttgtctatgcagactccccctcggtggacaaggcga +agagagacttccctggtcagccagacatgtggaaggatgcctttaaaccggacttttcacacataaaacttc +agttggcaccacagggaggctttgataagaacgggaacacccctcatgggaaaggtgtcatgaaaacgctaa +ccacacactcactcatcgcccgcgccacgggcctcctacacgaaagattggatgaattcgacctgcagggac +ccgagttgcccgtgtacaattttgaccataacagggtggctgctttcaggagactggcagctgacaacaagt +atgggcttatggaaaccataaaggtgggtaacaaattgaaaggcgtcaagactctagaacaactcaaggacg +ctctaaaagacataagtatcatgccttgcagaatagtctacaactcgatggcttacgacctcgattcgaacg +gatcagggagagtcagtgtcaaaaaggttgtagaccacaagatccaaaccaacaacgagctcaattccgcac +tcaacaacctgcgcggcgccagagtgagatactatgttaaatgcgttcaagagatggtatattccctccttc +aaattgctggcgcagccttcgtcacctcaagaatgacacggaggttga------acgtcagcagcatttggg +tcagaccaga------------aaagca--------agtggaggccactgaggaacccccatccccccca-- +--------actgagg---actggactataaccccagcaaatgcagtccaggaaggtaaaaagggcaagaaca +agagcggcagaggcaagaaacacaccgccttctccagtaaaggcctaagtgatgaggagtatgatgagtata +aaagaatcagagaagagagacaaggaaaatactccatagaagaataccttcaggatagggatcggtat---t +atgaagaattggccatagccaaggcaacagaggagaacttctgtgaggaggaagaaataaaaatcagacaga +gggtctttcgtccgaccaggaaacaacgcaaggaagagagggcaactctaggactggtcacaggcagtgaaa +taaggaagaggaacccagatgatttcaagccaagaggaaaattgtgggctgatgatgaccgcagtgtaaatt +acaatgagaaaatagactttgaagcgcctcccagcctttggtcccgaatagtcaacttcggatcaggttggg +gtttttgggtttctt-ccaacttgctcatcacatcaacacatgtcatccccccgaacatgactgaggccttt +ggtgtaccaataagtcagatacaagtacatagaagtggggagttttgtaaaatgaggttccctaaagctata +agacctgatgtctcaggcatgatccttgaagaaggagctcccgagggaacggtggtgaccatactgatcaag +aggaccaccggtgagctcatgccactggccgcccgaatgggtacccacgccaccatgaaaattcaagggaaa +atgcttggaggccaaatgggcatgcttctcacggggtccaacgccaagaacatggacctcggtaccattcct +ggagactgtggttgtccctatgtttacaagaggggtaatgattgggtggtcataggggtgcacaccgcagcc +gccagaggtggcaacactgtgatttgtgccactcaggggccagacggtgaggccacgcttgaggggggagac +aaccacgggacttactgtggggcaccaatactcggaccaggaagtgcaccaaaactcagcaccaaaactaag +ttctggaggtcatccaacgccccactcccgcctggtacttatgagcccgcctacctaggcggaaaggaccca +agagtcaaggggggaccatcactacagcaagtcatgagggaacaactcaaacctttcacagccccccgaggg +aagccaccacgaccggcgatcctggaggctgctaaggaaaccatctgtaatgtacttgagcagatcattgac +ccaccccaaaaatggtcttacgctcaggcctgtgcctctctggacaaaacaacatccagtggccatccccac +catatgaaaaagaatgtcaactggaacggagagtctttcactggtgtgttagctgaccaagcttccaaggca +aacctcatgtttgaacaagggaaacacatgcaacctgtgtatactgctgccctcaaagacgagctcgtcaag +actagcaagatctatgagaaaattaagaagaggctcctatggggttcagatgtgggcacaatgatccgctgt +gctagggcttttggaggcctcatggatgagatgaaagcaaattgtgtaaacttaccaatcagagttggcatg +aacatgaatgaagatggacccatcattttcgagaaacattcaaagtataagtaccattatgatgctgactac +t-ctaggtgggactcaacccaacagagacatatcttgggggctgcccttgaaataatgg-ttagattctcag +ctgaacctgaatt-ggcccaaattgtatctgaagatctcctagcccccagcgtggtggacgttggcgacttc +aaaatcaccataaatgaaggtttaccttctggagtgccgtgcacatcacaatggaactcaatttctcactgg +ctaataacactatgtgccatatcagaaatttcagggctgtcgccagatgtggtacaaacaaactcctgtttc +tccttctatggggatgatgagatagtcagcactgacattaagttagatcccatgaaactaaccaacaagttg +aaagagtatggactgatcccaacaagaccagacaagacagaggggccactcatagtcaaagagaaccttgat +ggcttgaccttcctgaggagggatgtgtgtcgggacccagctggttggtatggaaaacttgatcaatcctca +atcatgagacaattgttctggaccaaggggcccaaccatgacgaccccaatgagacaatgattccacactcc +cagaggcccatacaactaatgtcgttgctgggggaggcagcattacacgggccagctttctacaagaaagtc +agtaaattagttatcactgagctcaaagagggtggaatggatttttacgtgccaaggcaggaacctatgttt +aggtggatgagattctctgacctcagcacttgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttgggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggctatgcgggtggtatggaggtgcaagtgatgctcgcggggaacgcgttcactgc---tggcaagatcat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccgcatgt +gattgtcgatgttagaaccttagaacctgtattgctcccaatgcctgatgtcagaagcaccctctttcactt +caatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgctccaatggctc +tggtgacgacgttttcactgtctcatgtaggatcctcactaggccctcccctgaatttgatttcacatactt +ggtgccaccaacagtagaatcaaagaccaagccattcacactacctgtgctgaccctgggagaactgtccaa +ttctaga---ttccctctctctattgatgaaatggtcaccagccctaatgagtccatagttgttcagccaca +gaatggcagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgtaacatttgctccat +aaggg-----------------------------------------ggaaagtgacag-------------- +------------gacaggtccc--------------------------------------------ta---- +----atgaac-------------------------------------aacacatg----------------- +----------tggaacctggagattacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +ccctcttggtgtgcccgactttgcaggtgaggtctttggtgtactcagccaga---gaaatagagg---tga +aagcaac-----------------ccagcaaac--------agg-----------gctcatgatgctgtcgt +ggctacctacagtgataaatacacccctaaattgggcttagtgcaaattggga---------cttggaacac +caatgatgt---tga---aaaccagccaacaa---------------------------aattcaccccaa- +--------ttggt------ctgaatgaggtcgcca---atggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctgaca------ctaaatatgaatttagctcctgctgtggccccgctctttcctggag +agcgcctccttttcttccgctcttacgtcccat------taaaaggtggatt------tggaa--------- +--accctgctatagattgtctagtgcctcaggagtgggtccaacatttctatcaggaatctgccccatctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtcctttttgaggccaaactccacaa +aggtgggttcctgaccgtgtcaagcactagcacagggcctgttgtggtcccagccaatggctatttcagatt +tgattcctgggttaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcaggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgctgattaatgccgg---agccaatgctatcaatcaaagagcagaatttgattttaataggcaa--- +------------------------------ttgcaacaaaattctttcaaccatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcaccaactgatgcagccagaggagctgtcaatgcacccatgacccaagcactggattggagtggc +actaggtactgggcccctggttcaa------------tgaagaccaccagctattctgga------------ +aa-----------gtttgtgtcca------------------------------------------------ +-tgaatc----------------ctgttaggcaggttgagttcccgc------------------------- +-----------------------------------------------agccc---------------aaaaa +gagtgcgg-----------ccata------------ccatcaagcgccagctctgtgtcttct--------- +----------ggtagg-------accaattt------tacaaattctactcaatcaact---------gtag +ttagcacttcctcaatgc--------------------------------cac------------------c +ttctaggggttcgtctgctccttctactctgtcaagggccacaactagaacctccaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggcgccctccaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------atggta---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgcttttcgctc +accttcgcaagaagggggagtcaca--------agcttag--t-----------gaaaagataattaa---- +-----------tgat------------------------------------taataat------tgatcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196278.1/1-7529 |Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Sendai/YG99, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgccggacttgacaacggt---gcaaaa +cgagcatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaatttttccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcaagcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaactttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtgaagaccttggaagatctaaaatttg +cactaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgagaacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgaggc-------------ccaagaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgatatagttgtcgcgggcgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaccccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtcccctagcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgcttt +tcattttatggggacgatgagatcgtcagcaccgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagatctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaaggggacctaaccacgagaacccgtacgagagcatggtccctcattcc +cagcgagccacacagcttatggctctccttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgtgtccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtacacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccgtgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgttaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttggcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--atggtgctatggactgcttgctgccccaagagtgggtggagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcattaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccattaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacttgtc-------------ta---------------------------a +tcaaattc--------------caagtgctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcctatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196279.1/1-7559 |Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/3, complete genome +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtaggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196280.1/1-7559 |Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/2, complete genome +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtaggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaagtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196281.1/1-7559 |Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/5, complete genome +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtaggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaacttcggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196282.1/1-7517 |Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T15, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcctccacccaacgg------ggaggatgaaccagtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagcttaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaattaacaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccaccatggatgactccaagttgaagaaggtagctaacatatttttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcttcatgtgattg +gacttttgcaggcatagtggaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaataaccacatgactgctctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggtaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctgaccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaagtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcacgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacccccactaccttcaactttgaccgcaataaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaatatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaatgctactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttaggtgtgccaggattagatactatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcattgtcaaccgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtttcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacggcattctcaagcaaaggtctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgatgtgacaggcatgatcctagaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgccaagagtatggacttgggcaccacacca +ggtgactgtggctgtccctacatttacaagagagggaatgactacatagtcattggagtccacacggctgct +gcccgtggaggaaacaccgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgcggcgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaaaggtggcccctcattgcaacaagttatgagagaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgat +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctggacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcgaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataagtatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctcccccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattggacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtaacccgcgacccagctggctggtttggaaagctggaacagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcgggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttcctgatgttaggaataacttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtattcactgtctcctgcagggtgctcacccgaccttcccctgattttgattttaattattt +ggtcccccctactgttgaatctaaaaccaaacccttcacactccctatcttgactataggggagttaaccaa +ctccagg---ttccctgtgcctatagatgagctctacaccagtcccaatgagagtctggtggtgcaacccca +gaacgggagatgcgcactagatggggagctgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------cg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacattaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagcccga---gagaccatgata---- +-------------------------atgcctgc--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtctcttgcctcaagaatggatccaacatctttaccaagagtcggccccctcaca +atcagatgtagcactgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggtagcagaccgattgtcgtaccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggccaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccaccaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacctatgactcaggttttagactggaatggg +accagatattgggcccccggagccacgaaaactactactttctccggtggattcaccaatg----------- +-------------------------------tttctca---------------------------------t +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacatcagccacaccagcccctacgcctgtttccagac----------ctag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttccaatcc------ttctttt---------------------------t +cagctag--------gagttcttctagtgtttctactcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga------------tt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196283.1/1-7560 |Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/106, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtatcaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgcccccttacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttttcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacagggaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttctgatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgatacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataatagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------cgtccctgctcagggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ttcttt +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196284.1/1-7491 |Norovirus GII/Hu/JP/2007/GII.P21_GII.21/Kawasaki/YO284, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcatcaagtgacg---------------gagtattatctaatat +ggccgtcacttttaaacgag----ccctcggggcgcggcccaaacaaccg-cccccgagggacaaaccacca +aga---------------------cccccgagaccacccacaccagagttggtt-------aatagaattcc +ccc-----------------------------tcccccacccaacgg------ggaggacgagccaaccatt +tcttacaacg----------tcaa---agagggtgtttctggcttgcctgaactctcaacggtcacccaacc +ggaagagagctctacggcattcagcgttccccctcttagtcagagggagaacagggatgcaaaggaacccct +aactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgaggattagt +gctcggtgtacacaaaccaccggcagccatcagccttgctaaggttgagctgacccccttgtccttgtactg +gagacctgtgtacaccccac---agtatctcatttcccctgacactctcagaaagttgcatggggagacgtt +cccttacacagcctttgacaacaactgttatgccttctgctgttgggttcttgacttgaacgattcatggct +gag---cagaaggatgatacagaggacaacgggcttctttcggccttaccaggactggaacaggaaacccct +ccccacgatggacgactccaaagtgaagaaggtggccaatgttctcctctgtgctctctcatcattgtttac +tagaccaattaaggacattattggaaagttgaaacccctaaatatcctcaacattctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatcctcttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctacaggggcccgaggacctcgctgtgga +actcgtgcccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaattggcaaaatgct +ttcatctgctgcttcaaccctgagggcgtgtaaagatctcggagcttatgggctggagatactcaagttggt +catgaagtggtttttcccaaagaaagacgaaacaaatgagttggcaatggtgagatccatcgaggatgcagt +gctagacctcgaggccattgagaacaaccatatgacagccctactcaaggataaggacagccttgcaaccta +catgaggactcttgacttggaggaggagaaggcgaggaagttgtccaccaagtctgcatcaccggacatcgt +gggcacgattaacgccctactgtcaaggattgcagctgcccggtctctagtacacagggctaaggaggaatt +gtcaagtaggcctcgaccggtcgttgtgatgatttcagggagaccaggtatagggaagacccatctagctag +agagttggcaaagaagattgcctcctcactcacaggtgaccagagggtgggcctcatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagagtcgtcctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgacacctgccccctcacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttagccaacccagcgccactggattatgt +caactttgaagcttg-ctcaagacgtatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccagccagatatgtggaaggacaccttcaaacctgacttctcacacataaaactga +cattagccccacaaggaggttttgacaagaacggcaacaccccccatgggaagggtgttatgaagaccctca +ctgctagctccctcgttgcccgagcatcagggctcctccacgagagactagacgagtatgagctgcaaggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagctcgctgctgagaacaagt +acggtctcgttgacacaatgagggtcggatcacagctcaagaatgtcaaaaccatgacagaactcaaacagg +ctctcaagaacatctcagtcaagaaatgccagcttgtgtatggcgggagcacgtacacactcgaatctgatg +gtaaaggcaatgtgtgtgttgagaaggtgaagaacacaagtgtgcagactaacaacgaactctccggcgttt +ttcaccacctcaggtgtgccaggatcaggtactatgtcaagtgtgtccaggaagctctctactccatcttgc +aaattgccggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaagtggaagatttggagga--------gactagcaacaaagagggctgtccaaaacctaaa-- +-gat----gatgagg---aatttgtcatctcctctgatgacatcaaaaccgagggcaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttttccagcaaaggcctcagtgatgaggagtacgatgagtata +agaggatcagagaagagagaaatggcaagtactccatagaggaatacctacaggacagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagatttctgtgaagaagaggaggccaaaatccggcaaa +ggatattcagaccaacaagaaaacaacgcaaagaggaaagggtctctcttggtttggtcacaggttctgaga +ttaggaagagaaatccagatgactttaaacctaaagggaaactatgggctgatgatgacaggagtgttgact +acaatgagaaacttaatttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacagatacaaattcacaaatcaggagagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacgggcatgatcttagaggaaggtgctccagaaggtactgttgccacactcctcatcaag +agaccaactggagaactcatgcccttggcagccagaatgggtacccacgcgaccatgaaaatccagggtcgc +actgttggtgggcagatgggcatgctacttacagggtctaacgccaagagcatggatttgggcacaacccct +ggcgattgtggctgtccctacatctacaagagggggaacgactacgtggtcattggagttcacaccgccgct +gctcgtggaggaaacactgtcatctgtgcaacccaaggaagcgagggtgaagccatgctagagggtggcgat +aataagggaacctactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttctggaggtcttccaccacccccctgccacccggaacctatgaaccagcttatctgggcggcaaggacccc +agagtgaaaggtggtccctcactgcaacaggttatgagggatcagctaaaaccattcactgagcccagaggc +aaaccacccaaacctagtgtgctagaagctgccaagaagactataatcaatgtgcttgaacagacaatagac +ccacctcaaaaatggacatacgcacaggcgtgtgcatcactagataagaccacttccagcggccaccctcac +cacatgcggaagaacgagtgctggaacggagagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctttgaaggacgagctagtcaag +actgataagatctatgggaagatcaaaaagagactcctatggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctgatggacgagctcaaggcccattgcgtcacactaccagtcagggttggcatg +aatatgaatgaggatggacccataatatttgagaaacattccagatacagatatcattatgatgcagattac +t-cccgctgggactcgacacagcaaagagcagtgctggctgcagccctggaaataatgg-tcaaattttcat +cagaacctcatct-ggcccaagtggttgcagaagacctcttgtcccccagtgtgatggatgtgggtgatttc +aagatatcaatcaatgaggggttaccctctggtgtgccttgcacctcacagtggaactccattgcccactgg +cttctcacactatgtgcactgtctgaagtcacagatctgtcccctgacatcatccaggcaaactccctattc +tccttttatggtgatgatgaaatagtgagcacagatatcaaattggacccagagaaactgacagcaaagttg +aaggaatacgggctaaaaccaacccgtcctgataaaacagaaggacccctaattatctctgaagacttggac +ggcctgaccttcttacggagaacggtgacccgcgatccggctgggtggtttggcaaactggaccaaagttca +atactcagacaaatgtactggaccaggggaccaaaccatgaggacccctctgaaacaatgataccacactcc +caaagacccatacaactgatgtcactactaggtgaagctgcactacatggcccatcattctatagtaaaatt +agcaagttggtcatctcagaattgaaagagggtgggatggacttttacgtgcccagacaagaaccaatgttt +aggtggatgaggttctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgctacaggtctcgtaccagagatcaacactga +gaccttgcctctcgagcccgtggccggagcggcaattgctgcccctgttacgggccaaaataatataattga +tccctggattagaaataattttgtgcaggcgcctaatggtgagtttacagtctcccctagaaattcccctgg +tgaaattttaatgaacttggagttagggccagatcttaatccatatttggctcacctttcaagaatgtacaa +tggttatgctggaggtgtagaagtgcaagtgctcctagctgggaatgcgttcacggc---aggaaagatcct +ttttgcagcagtccccccaaatttccccgttgatatgctcagtcctgctcaaatcacaatgcttccccattt +aattgtagatgtcagaactttggagcccattatgatccctctgcccgatgttaggaatgttttctatcactt +taataaccagcctgcc---ccaagaatgagattggttgccatgctctacacccctttaagatccaatgggtc +cggtgatgacgtattcaccgtctcctgcagggtgttaaccagacctactccggactttgagtttacatactt +agtccccccctcggtagagtccaaaaccaaacctttcaccctacccatcctaacaattggagagttgacaaa +ctctaga---tttccagccccgatcgatcagttgtacacttcacccaacgctgatatagttgtccaacccca +aaatggccggtgcacactggatggtgagctacaaggtacaacacaactcttgacaacagcaatatgctcata +caggg-----------------------------------------gcatgacatcaaacc----------- +-----------ccactagt--g------actactggg----------------------------------- +----------atg----------------------------------atcacctc----------------- +----------------ctgcacctggttcaccccaatggggcaacatatgacccgaccgaggacgtgccagc +tccttttggcacgcaggactttcggggcattttgtatgggatgttgactcaaa---accc------------ +-----ccgaacctccgg---ggacgaagccgcc--------aac-----------tcccatgggatctacat +ctcatccaccagtgaaaagttcactccaaaattgggtacaattggcttacac------------caagtgca +aggcgacat---agccagcaaccaacagtcaa---------------------------aattcacaccag- +--------tagggatagcagtgaatgg------------caacactcctttcagacagtgggaactcccaaa +ctactctggtgcc-ctcacc------ctcaacacaaaccttgcaccagcggttgggcccaacttccctgggg +agcaaatccttttcttcaggtcaaatgttccaagt---gttcaaggtggccaa-----cctat---agag-- +----------attgattgcctgatcccacaagaatgggtctcccatttttatcaagaatcagccccttctca +gagtgatgtggccttggtcaggtatgtcaaccctgacacagggcgcacaatctttgaggccaaattgcatag +gcagggatttatcaccatagcggccactggaagcaaccccgtggtcgtgcctcccaatgggtatttcagatt +tgattcctgggtcaaccagttttatgcactcgcccccatgggaactgggaatgggcgcaga---------ag +agttc---------agtaatggctggagctttcatagcaggattggcaggtgacatgctcaccaacactgtt +ggttccctggtcacagcggg---ggctaacgctataaaccaaaaagttgaatatgacttcaccaaacaa--- +------------------------------ctgcaaagtgcctccttccaacatgacaaggacatgcttcaa +gcccagatcaacgcaacaaaacaattgcagagtgacatgatggccatcaaagcaggggttttgaccgctggc +ggcttttcccctgctgatgcagccagaggggcagtcaatgctccaatgacaaaagtcttagattggtcaggg +acgcgttactgggcacccaactcaaccaaaacaacaagccaatctggccagttctcc-tctac--------- +aa-------------ctgtacatagaccc----tttgt---------------------------------t +c-------------------------------aatcaaaaactgtccaaccatctccttcgcgggcgctctc +atcttcgggtag------------------------cgttcgcagcctttctactcaatcaaca-------- +-atgcttt--------------------------------caaattctagctcctc---------------- +----------------------ttctcgtgg------gactccttcaac----------tca-----atcaa +cagatat--------t------------------------------------t------------------c +ttcctc---------------------------------------gcgaacggcagactgggttcgaagtca +g---aggagcctgagcccctatatgg---atggggctctgcagacagcctttgtcaccccaccatcaagcag +agcttct---tcta------------------------------caggca---ccgtctcaacagtgcctaa +aggggttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgcttttcgcac +acctcaggaagaggggggagtcaca--------agcctag--t-----------gaaaagaatt-------- +-------att-ttg----------------------at-a--------aa-ttct-------------ttt- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ196285.1/1-7559 |Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/108, complete genome +----gtgaatgaagat---ggcgtctact-gacgcttccgctgccgctgttgct------------atcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacgccagaactagtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgattcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggtgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttacttggcgactacgagctacaagggtctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggcgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcttccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctagacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgccctccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +cgcat---------tgtaatggctggagctttctttgctggattggcatctgacgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccagaaagttgaatttgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196286.1/1-7535 |Norovirus GII/Hu/JP/2002/GII.P16_GII.17/Saitama/T87, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaacgcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggc---gaagaagaagaaccagtcatt +aggtttgagg----------ttaa---gagtggaatctctggcctgcccgagctcacgacagttccccaacc +ggatgtgaccaacacggcattcagtgttccgccgctgagcttgagagaaaacagagaggccaaggaaccgct +gactggggcaatactagagatgtgggatggagagatataccactatggcttgtatgtggagaaaggcttggt +gttgggtgtacacaaaccacctgcagctataagtatggcgaaagtggaaatgacgccgctgtcgttatactg +gcgtgtggtgtatacccccc---aatacctcatctcccctgaaactctcaagaggctcaacggagaggcatt +cccttatactgcctttgataacaactgttatgccttttgctgctgggtgttagaccttaatgactcatggct +cag---cagaaggatggtacaaagaacaacaggcttctttagaccctaccaagagtggaacagaaaacccct +acccactatggatgactccaaaattaagaaggtggcaaacatattcttatgttcattgtccacgctgttcac +cagacctataaaagacatcatagggaaaattaaaccattaaatatcttgaacattctggcaacgtgtgactg +gacgtttgccggaatcgtagagtctctaatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccctacttggcgaatacgagttgcaagggccagaagacatcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +atcctcagcagcgtcaacgctcagggcttgcaaagatcttggtgcctatggtttagagatactcaaattagt +catgaaatggtttttcccaaagaaagaagaggccaatgaactagccatggtgagagcaatagaggatgctgt +gctggatcttgaggcgatagaaaacaaccacatgacagctctgctgaaagacaaagacagccttgcaaccta +catgaaaacactggatctagaggaagagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaatgccctgttggctcgaatagcggcagctagatcactagtccacagggccaaggaggagct +atctagcaggatcagaccagttgttgttatgatatctggcaagccagggataggcaagactcacctggccag +ggaggtggcaagaaaggtggcatccactctcacgggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggacgcatacaaaggcgagagggtcgtgttgtgggacgactatggcatgagcaaccctattca +tgatgccctgcgcatacaggaattggccgacacgtgtcccctcaccttaaattgtgatagaattgaaaacaa +gggaaaagtttttgatagtgaagtcataataatcacaacaaacctcgccaatccagctcctcttgattatgt +caactttgaggcctg-ttccaggagaattgatttcctggtgtacgccgaagcaccagaagtggagaaggcaa +aacgagacttccctggtcaaccagatatgtggaaggacgctttcaaagcggacttttcgcatatcaagttac +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaaaaccctca +ctaccggttctctgattgcccgtgcgtcaggtttactgcatgagaggatggatgaatttgaactccagggcc +ccacaatcaccactttcaatttcgaccggaacagaatcaccgcctttagacaattggctgcagaaaacaaat +atgggttggtggacaccatgagagttggcaatcaattgaaaggggtgaaaaccatggaagagcttaagcaag +caatcaagaatgtgaccattaagaggtgccagattatctacaatggttccacgttcgaccttgagtctgacg +gtaagggtaaagttttggtggaaaaggtcaaaaacacctctgtccagaccaacaatgagctggccggagccc +tacatcacctcagaagtgctcgaattagatactatgtcaaatgtgtgcaagaagcagtctactccatcctac +aaatcgccggcgctgcgttcgtcaccacacgtattgcacgccgcatga------acatacaagaactttggt +caaagccaacatt---agaccaaagcga--------accagaggctagagaagaggcccccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaggaaacacactgcattttctagcaagggcttaagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaagacttttgcgaggaggaagaaattaaaatccgccaga +ggatctttcgccccaccagaaaacaaaggaaggaagaaagggccacgctagggctagtgactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttccggttggg +gtttttgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcgggcataacagaggcgttt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgagttttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagaaggtgcgccagagggcaccgtggcaaccgtgctcatcaaa +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcaaccatgagaattcagggccgc +atggttggcgggcagatgggtatgttgctcactggttcaaatgctaagggtatggatttggggacaactcct +ggtgactgtggctgcccgtacatctacaaaaggggcaatgactatgtagtcattggagtgcacacagcggca +gcccgtggtggaaacactgtcatctgtgccacacagggaagcgaaggtgaggcgactctcgagggtggagac +aacaaaggaacatactgtggggcacccatcctgggtcctggaggagcaccaaaattgagcaccaaaaccaaa +ttttggagatcatcaaacacgcccctcccaccagggacatatgagcccgcctaccttggcggtcgtgacccg +cgtgtaaagggcggaccctctttgcagcaagtcatgagagatcagttgaagcccttcactgagcccaggggt +aaacctccaaaacctaatgtgctggaggcagctaaacagaccatcatcaacgtcctcgagcaaactttggac +cccccacaaaagtggacatacgcacaagcgtgcgcttcacttgataagaccacctctagtgggcacccccat +cacgtccgaaagaatgaattctggaacggtgagacctttgttggtaagttggcagaccaagcatcaaaagcg +aacctgatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggatgagctggtcaag +actgacaaaatctatggaaagatcaagaagagattgctttggggctctgacttgtccaccatgatccgatgt +gccagggcctttggtggactcatggatgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaggatggcccaataatatttgagaagcattccagatacaagtaccattatgatgcagattac +t-cccgttgggactcaacacaacagagggctgtcctagcagcggccttggaaataatgg-tcagattctctg +cagaaccacaact-ggcgcaaacagtcgctgaagatctgctggcccccagtgtggtagatgtaggagacttc +aaaatttcaataaatgaggggctcccttctggtgtaccatgcacttcccagtggaactccatcacacactgg +ctgttgactctctgtgctttgtctgaagtcaccaacctgtcccctgacatcgtgcaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agggagtatggtctgaaaccaacccgcccagacaaaaccgagggacctctgattatcagtgaggatttgaac +ggactcaccttcctccggaggacagtttctcgtgacccagctggctggtttgggaagttagaccaaagctcg +atactgaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctctcttcacggaccctctttctacagcaagatt +agtaaattggtcataaccgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---cgatggtgctacgggcctcgtcccagagatcaacaacga +gaccctccctttggaaccagttgcgggtgcagcaatcgccgcgcctgtcactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggagagttcactgtctcacctagaaactcccctgg +agaaattcttttaaatttagaattgggtcctgatttaaatccatatttggcacatctatctagaatgtacaa +tgggtatgccggtggcgtggaagtccaagtcctcctagcagggaacgcgttcactgc---agggaagatcct +cttcgctgccgtaccaccaaatttcccagttgaattcttgagtcctgcacagattactatgttgccacacct +aatagttgatgttagaacccttgaacccatcatgataccactccctgatgttaggaacaccttctttcatta +caacaatcaacccgcc---aaccgcatgcgattggtggctatgttgtatacccctttgagatctaatggttc +tggtgatgatgtcttcactgtttcatgtagagtgctaactaggcccaccccagattttgagttcacatattt +ggtccctccttcagtagagtctaagactaaacccttttctctgcctatattaacaatttctgaattaaccaa +ttcaaga---tttcctgcacccatagattcattgtttacagcccagaataacaatctcaatgtccaatgtca +gaatggtcggtgcacactggatggtgagttgcagggaaccactcaattgctgccctcgggtatatgtgcttt +caggg-----------------------------------------gaagactaacagcag----------- +-----------atgtaga------------------------------------------------cg---- +-------gaagtc----------------------------------acgatgac----------------- +-------agatggcacatgcagttgaccaacctcaatggaaccccctttgatccaacagaggacgtgccggc +tccgttaggcaccccagacttcacaggcctcctcttcggagtggcaagtcaga---ggaatg---------- +-----tt-----ggatccaacccaaacaccact--------agg-----------gcgcacgaggctgtgat +ctccacaaccagttcacagtttgtgccaaaattaggatcagtcaactttggta---------gt---actag +caccgactt---ccaactacaacaacccacca---------------------------aattcacaccag- +--------ttggaatc------aagattgaaagtggacac------gaatttgatcagtgggccctacctag +atactcaggtcat-ttgacc------ctcaatatgaaccttgccccacctattgccccaaatttccctggtg +agcagttgttgttctttagatcaaatgttcct------tgtgctggtggcgt------cagtg--------- +--atggtgtcatcgattgcttgttgcctcaggagtggatacagcacttctatcaggagtctgctccatccca +gtctgatgtggctctgatcaggtatgtcaaccctgacactggccgcacactcttcgaggcgaaactccacag +aacaggctacatcactgttgcccactcaggtgattatcccctcgttgtcccctccaatggatattttagatt +tgattcctgggtcaaccagttttactcactcgcccccatgggaacaggaaatgggcgcaga---------cg +ggtgc---------agtaatggcaggagctttcatagcaggtcttgcaggtgacatgctcaccaacacagtt +ggctccctagtgaatgctgg---ggccaatgctataacccaaaaggtggattttgagaacaacaaacagctc +caagcag---------------------------------cctcttttcaacatgacaaagacatgcttcaa +gcacaggtggctgccacaaaacaattgcaggctgacatgatcgccatcaaacaggggatattgaccgctggc +ggcttttcccccactgacgcggcgagaggaacagtgggtgcacccatgaccaaggtcctcgattggtctggt +actcgttactgggcgccaaactccacgaggacaactggttactcagggcagttcacatcaacg--------- +cc---------------------cttgcacacacccgtgaaaacaagtcagcctgctcc-----------tg +ccaaaag----------------gacccaacccctctct-tc--------atcctc---------------- +------------------------------aggtagtatctacagcctttca------------------ac +acaaagta-----------ctgtt------------ttgactaaaccttcttctg----------------- +----gttcttccgttt-----cttctgcttc------aacgcaatctac----------aaa--------at +tgagttcag--------------------------------------tttctt------------------c +aatgga---------------------------------------taggacagcagattgggttaaccaaca +aa---ggagcctcagcccttacatga---gaggtgctctcaatatatctcatgtaacacctccatcaagtag +ggcttcg---agtt------------------------------cgggaa---cagtctcgactgtacccaa +ggaagttttgga-ctcctggacacctgcat------------tcaatacacgcagacagccgctcttcgcac +acctcagagtgaggggggagtcacg--------tgtttag--t-----------gaaaagaatcaat----- +--ta-a-ttt-taat-----ta----at-----------------------tt-------------tgatta +g-gttttaa----ttgg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196287.1/1-7568 |Norovirus GII/Hu/JP/2010/GII.P4_GII.4/Shimada/ASC96, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcttggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattattactactaacttggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tgggcatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaaggactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgctccctttactccaaagctgggcagtgttcagttcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------cacaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacagcttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctctttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagtcaatcctaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctgctgccactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatttgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgattc--ata-----c------ttttc----------c-ct----tttt---cctcttc- +-------a-------tc---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196288.1/1-7512 |Norovirus GII/Hu/JP/2002/GII.P5_GII.5/Saitama/T52, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttgtttacaaacat +gtcttctaccctaaagaaag----ccctcggggcacggcctaaacagcct-gtcccgagggacaactcacaa +aaa---------------------ccaccaaggcctcccacgcctgagctgatt-------aaaaatatgcc +ccc-----------------------------ccccccgcctaacggtg------aagacgagccaaccgtt +aggtacgaag----------ttac---aaaaggggtctccggcctacctgagctcacgacagtcacacaacc +agactcaaccaacacggggtttagtgtccccccgttgagtcaaagagagaacaaggaagctaaggagccact +gaccggggcaatactggaaatgtgggatggagagatttaccactatggtttgtatgtggagaaaggtctcgt +gctgggtgtgcacaaaccacccgcagccataagcatggcgaaggtggaaatgacaccgctttcgttatactg +gcgtgtggtgtacacccccc---agtacctcatttcccctgacacgctcaggagactcgacggagaggcgtt +tccatataccgcatttgacaacaattgttacgccttttgctgctgggtgttagaccttaatgattcatggct +tag---taggagaatggtgcaaagaacaacaggcttcttcaggccctaccaggagtggaacagaaaaccttt +gcccaccatggatgattccaagatcaagaaagtggcgaacatatttttatgctctttatccacactattcac +taggcctattaaagacattattgggaaaattagaccattaaatattttaaacattctggcaacatgtgattg +gacgttcgccgggattgtggagtcgctaatcttgtttgctgagctcttt---ggagtgttctggacaccccc +agatgtgtctgcaatgattgcccccctacttggtgactacgagttacaaggacctgaagacatcgctgtcga +actcgtacccgtggtaatgggaggaatcggtttggtgttaggcttcaccaaagagaagataggcaagatgtt +gtcttcagcagcatcaacactcagagcctgtaaagaccttggggcctatggattggaaatactcaagctggt +catgaaatggttcttccccaagaaagaagaagctagtgagctggccatggtgagggctatagaagatgccgt +gttggaccttgaggcaatagaaaacaaccacatgacagcactgctcaaagacaaagacagtctcgcaaccta +catgagaacactggaccttgaggaagaaaaagccaggaagttgtccaccaagtccgcatcccctgacatagt +tgggacaattaacgccctgttagcccggatagcggcagccaggtcactggttcacagggccaaggaggaact +gtctagtagaattaggccagttgttgtcatgatgtctggtagaccaggtatagggaagacacacctggccag +ggaagtggcaaagaaggtggcatctaccctcacaggggaccagagggttggactcataccaaggaatggtgt +ggaccattgggatgcatacaagggcgaaagggtcgtgctatgggacgactatggcatgagtaaccccattca +tgatgccctgcgcctgcaggagctggccgacacatgtcccttaacattaaattgtgacagaattgagaataa +aggaaaggtgtttgatagtgatgttataatcattacaacgaaccttgcaaacccagcccctcttgattatgt +caactttgaggcttg-ctccaggcgcattgacttcctggtttatgccgaagcaccggaagtagaaaaggcaa +agcgagacttccccggccagccagacatgtggaaagatgcttttaaatcagatttctcacatattaaattac +aacttgcaccccagggaggcttcgacaaaaatgggaacaccccacatggaaaaggtgtgatgaaaacactca +ccactggctctctgatcgctagggcgtcgggcctcctacacgaaagaatggacgagttcgaactccagggcc +cagcaatcaccactttcaacttcgaccgtaacaaaattgccgcgttcagacaattggctgcggaaaataaat +atggaataatggacaccatgcggattggcaaccaactgaaaggggtgaaaaccatggaagaacttaaacagg +caattaagaatgtgtccatcaaaaagtgccaaataatctataatggctctacattcagtcttgagtctgatg +gcaaaggcaaggttttggtagagaagatcaaaagtgccactattcaaaccagtaatgaactggctggggctc +tgcgccacctcaggagtgccagaataaggtattatgtgaaatgtgtgcaagaagctatctactctattcttc +agattgctggtgccgcattcgtcaccacgcgcattgcacgccgcatga------acatacaagaactctggg +caaaaccaccaat---agaccagggtga--------atcagagcccaaagaagagaaccctaagttggag-- +-gac-------gatg---aattcatcatatcatctaaggacatcaaggaagaaggcaagaagggcaagaaca +aaactggccgtggcaagaaacacaccgcattctccagcaagggtctaagtgatgaggagtatgatgagtaca +agaggataagagaggaaagaaatggtaagtactctattgaagaatacctccaggacagagacagatac---t +acgaggagcttgccattgctaaggctactgaagaggacttctgtgaggaagaggagatcaaaattcgccaga +ggatctttcgccccacaagaaaacagagaaaggaagaaagggctacgttgggactggtgactggttcagaaa +tcaggaagaggaaccctgatgattttaagcccaaaggaaagctgtgggccgacgacaacagaagtgtcgatt +acaacgaaaaactggatttcgaggctcccccgagcatctggtctagaatcgtcagttttggctcaggttggg +gtttctgggtgtcac-caagcctgtttataacatcaactcacgtgatcccttctggtgtaacagaggtattc +ggcgtgcccgttaagcaagtccaaattcacaagtcaggcgaattttgccgtttcagatttccaaaaccaatc +aggacagatgtgacaggaatgatcctagaagagggagccccagaaggcaccgtggcaaccatcctcatcaaa +cgccccaccggcgaactcatgccacttgctgccagaatggggacgcacgcgaccatgaaaattcagggacgc +atggtcggtggacagatgggcatgttgctcaccggttcgaacgccaaaggcatggatttagggacaactccc +ggagactgcggctgcccatatatttacaagagaggtaacgattacatcgttatcggagtccacacagcagcc +gcccgcggagggaacactgtcatctgtgctacacaagggagtgaaggtgaagcaacacttgagggtggagat +gacaaaggaacatattgtggggcacccatcctcggtcctggtggggcaccaaaattgagcaccaagaccaag +ttctggaggtcatcaaacacacccctcccaccgggaacatatgaacctgcttaccttgggggccgcgaccca +cgtgttaagggcgggccctccctgcaacaagtcatgagggaccaactgaaaccattcaccgaacccaggggc +aaacctccaaagcctagtgtcctagaggcagccaaacaaaccatcattaacgtcctggaacagaccctggat +cccccacaaaagtggacttacgcacaagcgtgtgcgtcacttgacaaaaccacctccagcgggcacccccac +cacacccgaaagaatgagttttggaacggagagactttcaccggcaaactggcagatcaagcgtcaaaagcg +aacctaatgtttgaggaagggaaacacatgacaccagtgtacacggcagcccttaaggatgagctagtcaag +acagacaagatttatgggaagatcaagaaaaggttgctgtggggttctgatctgtccaccatggttcggtgt +gcaagagcttttggggggctcatggaggagatgaaggctcactgcatatcactcccagtccgggttggcatg +aatatgaatgaagatggtccaataatatttgagaagcattccaggtataaataccattatgatgcagattac +t-cccgatgggactccacccaacagagagctgtgttagctgcagctatggaaataatgg-ttagattctctg +ctgaaccacaact-atcacaaaaagtggctgaagatttgttggcccccagtgtggtggacgttggagacttt +aaaatttcaataaatgaagggcttccatccggtgtcccgtgcacctcacagtggaattccatcacacattgg +cttctaactctctgtgctctgtctgaaaccaccaacctgtctcctgacatcatacaggcaaattccatgttc +tcattctatggtgatgacgagatcgttagcaccgatataaaattggacccagaaaaattgaccacaaaattg +agagagtatggtttgaaaccgacccgtccggacaaaacagagggacctctaattattagtgaggatttggat +ggactcaccttcctccgaagaacagtctcccgtgatccagctggctggtttgggaaattggaccaaagttca +atactcaggcaaatgtactggaccagaggacccaaccatgaagaccccaatgaaacaatgatacctcactct +cagaggcccatacaactcatggccctacttggtgaagcctctctacacgggccctccttctacagcaaaatt +agcaaattggtcataactgaactcaaggaaggtggaatggatttttacgtgccaagacaagagcctatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctactccatcaaa---tgatggtgccgccggcctcgtgccagaaagtaataatga +ggcaatggctctggaacccgtggtgggggcgtctttagccgcccctgtcactggccaaactaatataataga +cccctggattagaactaattttgtccaagcccctaatggtgaattcacagtttcccctagaaattcccctgg +agagatattggtcaatttggagttaggtccagaactgaacccttatctggcacatttagctaggatgtacaa +tggttatgcgggtggtatggaagtgcaagtgatgctcgcggggaacgcgttcaccgc---tggcaagattat +ctttgccgccgtgccaccttactttccagtggaaaatcttagcccttcccaaataacaatgttcccacatgt +gataatcgatgttagaaccttggaacctgtgttgctcccaatgcctgatgtcagaagtacccttttccactt +taatcaaaaggatgaa---cctaagatgagacttgttgccatgctttacacccctcttcgttctaatggttc +tggtgacgacgttttcaccgtctcatgtaggattctcactaggccctcccctgaatttgattttacatattt +ggtaccaccaacagtggaatcaaagactaagccattcacactacctgtgctaacactgggagaactgtccaa +ctctaga---tttcctctctctattgatgaaatggtcaccagtcccaatgagtccatagttgttcagccaca +gaatggtagggtcacactagatggggagctgttaggcacaacccaactgcaagcatgcaacatttgttccat +aaggg-----------------------------------------ggaaggtgacagggc----------- +-----------aggtccc------------------------------------------------ta---- +-------atgaac----------------------------------aacac-------------------- +-------atgtggaacctgcagatcacaaacctaaatgggacgcaatttgaccctacagatgatgtcccagc +cccccttggtgtgcccgattttgcaggtgaggtctttggtgtactcagccaga---gaaacaga-------- +------------ggtgaaagcaacccagcaaac--------agg-----------gctcatgatgctgtcgt +ggccacctacagtgacaagtacacccctaaattgggcttagtgcaaattggaa---------cttggaacac +caatgatgt---tgaa---aaccagccaacaa---------------------------aattcaccccaa- +--------ttggttta---------aatgaggtcgctaatggccatcgatttgaacagtggactttgcctag +gtattctggtgcc-ctgaca------ttaaatatgaatttagcccctgctgtggccccgctcttccctggag +agcgtcttcttttcttccgctcttacgtccca------ttaaaaggtggatt------tggaa--------- +--accctgctatagattgtctggtgcctcaggagtgggtccaacatttctatcaggaatctgccccctctct +gggggatgtggccttagtcaggtacgtcaacccagacaccgggcgcgtactttttgaggccaaactccacaa +aggtgggttcctgactgtgtcaagtactagcacagggcctgttgtggttccagccaatggctatttcagatt +tgactcctgggtcaatcaattttactctcttgcccccatgggaactgggaatgggcgcaga---------ag +gtttc---------agtaatggcgggagctttcatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcactgattaatgccgg---agccaatgctattaatcaaagagcagagtttgattttaataggcaattg +caacaaa---------------------------------attctttcaatcatgataaggagatgttaaat +gcccaaattcaagcaacaaaacagttgcaggctgatatgatagcaatcaaacagggagtcctagctgctggg +ggtttctcgccgaccgatgcagccagaggagctgttaatgcacccatgacccaagcactagattggagtggc +actaggtactgggcccctggttcaatgaagaccaccagctattctggaaagtttgtatccatg--------- +aa---------------------tcctgttaggcaggttgagttcccgc---------------------ag +cccaaaa----------------agagtgcggccataccatc--------aagcgc---------------- +------------------------------cagctctgtgtcctctggtagg------------------ac +caatttga-----------caaat------------tccacccaatcaactgttgtca-------------- +----gtacttcctcac-----tgccacctcc------taggggctcttc----------------------- +------------------------tgccccttctactctgtc------aaggg------------------c +cacaac---------------------------------------cagaacttctaattgggttgaggaaca +aaacaggaatttggaaccctacatga---ggggtgcccttcaaacaacatttgtcacccccccttccagccg +ggcatct---agca------------------------------atggaa---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------ttaacacccgcaggcagccgctttttgctt +accttcgtaagaagggggagtcaca--------agtttag--t-----------gaaaagataatt------ +---a-a-tga-ttaa-----ta-------------------------------------------------- +-------------attg---atctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196289.1/1-7559 |Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/109, complete genome +----gtgaatgaagat---ggcgtctact-gacgcttccgctgccgctgttgct------------atcagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctacgccagaactagtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgattcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggtgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttacttggcgactacgagctacaagggtctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggcgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcttccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctagacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgccctccacggcccagcattctacagcaaaatc +agcaaattggtcattgcagagctaaaagagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgacttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccgactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctttaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtatactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggccctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +cgcat---------tgtaatggctggagctttctttgctggattggcatctgacgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccagaaagttgaatttgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196291.1/1-7543 |Norovirus GII/Hu/JP/2011/GII/Yuzawa/Gira2HS, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctattgttgccgttgcaggc------------aaaaac +c------ac----aacgacaatgaaaatcaaaacaaagacg---------------gcatattgtcaaacat +ggccgtcacttttaaaaagg----ctttgggggcgagacctaaaaggcccccccctaatacaca-------- +-----------------------gccactgagaccaaccaccccagagctcgtg-------gcacagatacc +gcc-----------------------------tccaccgcccaacgg------agaggatgaaactactgtt +aagtatgagg----------tgga---caaagggatcactgggctgccagagctgacaacagtaacacagcc +agcagagaataacacggcatttagtgtcccccccctcagtcagagggagaaaaacgatgccaaagaacccct +tcctggtaccatactagagatgtgggatggggaaatataccattatgggttgtatgttgagaaagggttggt +ccttggagttcacaaaccgcccgcagcaataagtatggccaaggtcgagctgaccccattgtctctgtattg +gaggccggtctacactccgc---agtacttggtgtcacctgaaacactgcggaagctgagtggagagtcatt +cccatatatagcttttgacaacaattgctacaccttttgctgttgggtgcttgatctaaatgactcgtggct +gag---cagaaggatgatacaacgaactactgggtttttcagaccgtatcaggactggaacaggaaaccttt +gcccacaatggatgactcaaaaataaagaaagtggccaacatgtttttgtgtagcttatcaaccctgttcac +ccgtcctataaaagatatattagggaaggtaaagccactcaacatcttgaacatacttgcaacctgtgattg +gacattccctggcatagtagaatccctgatacttcttgctgaactcttt---ggtctttactggacaccccc +agatgtgtctgcaatgatcgctcccttgcttggtgaatacgagctacagggcccagaagacatcgctgtaga +gctcgtccccgtggtgatgggagggatcggattggtgttaggtttcaccagagagaaaatagggaaaatgct +ttcatcagcagcatcaacattgagggcttgcaaagatcttggggcatatggcttggaaatcctgaaattagt +gatgaagtggttctttccaaagaaggatgaagctaatgagctggccatggtcagggcgatagaggatgcagt +gctagacctggaagcaattgagaataatcacatgacagccctcttgaaggataaggatagcctttccactta +catgagaaccctggacttagaggaagaaaaggctcgcaagttgtcaactaaatcagcctccccagatatagt +tggcaccatcaacgcgctgctggcacgcatagcagccgcacgttcgttggtgcaccgagccaaggaggagct +gtcaagtcgacccagaccagttgtgctcatgatttcaggcagaccaggcataggcaagactcacgtggcaag +ggagattgcaaagagggtggcctcatccctgacaggagaccagaggataggactcgtgcctaggaatggcgt +tgaccactgggacgcctataagggcgagagagtggttctttgggatgactatggaatgagcaacaccataca +ggatgccctgaggctgcaggaactggcggacacgtgcccgctaaccctcaactgtgacaggatagagaataa +gggaaaactttttgacagtgatgtcataatcattaccaccaacctggctaaccctgcccccctcgattatgt +caattttgaggcctg-ttccaggagaatagatttccttgtgtatgccgacgcgccagaggttgaaaaggcaa +aacgcgactttcctggccaacctgacatgtggaaggacgctttcagacaagacttctcccatatcaagctcc +aactggcaccccaaggtgggtttgataaaaatggcaacacaccccatggtaagggcttaatgaagactttaa +ccctgagctcgctcgttgcaagggcctctggcttactacatgagaggctagacgagtttgagctgcagggcc +catcaatcacaaccttcaacttcgatagaaacaaagtcttggctttcagacaacttgccgcggaaaacaaat +atgggttggtggaaaccatgagagttggcaaccatctaaagggtgtgaaaacgatggaggagttaaagcaag +ccatcaagggcgtcaccattaaaaggtgtcaaatcatatatggtggttccacatacaccttggagtctgatg +gtcagggaagagtcttagtggacaaagtcatcagcaccactgtccaaactaacaacgagttggctggcgtcc +tatcacacctcagaaatgcaaggattagatattatgtaaaatgtgtgcaggaaactctgtactcgatcctgc +aaatcgctggggccgcatttgtcaccactcgcattgccaagcgaatga------acatcagcaatctctggt +caaaaccactcagggaggaggatgtgca--------agaggaggtcagaaaa------ccagaacccaaa-- +-----tgcgatgagg---aattcatcgttgtgtccgaagaaataaaaacagagggcaagaagggcaaaaaca +agactgggcgtggcaagaaacacaccgccttctccagtaagggcctcagcgatgaggagtacgaggagtaca +agcggatcagggaagagagaaacggaaaatactcaatagaagagtaccttcaggacagagacaaatac---t +atgaggaactggctattgccagggccactgaggaagacttctgtgaagaagaggaaatcaaaatccgacaga +gaattttccgtccaaccaggaaacagaggaaagaggaaagggcaaaccttggccttgtgaccggctctgaaa +tcaggaaaagaaacccagatgattttaaaccaaaaggagacctttgggcggatgacaccaggagtgtgaact +ataatgaaaagatagactttgaagcccccccaagcatttggtccagaatagtcaattttgggtctggatggg +gcttctgggtctccc-ctagtctattcatcacatcaacccatgtgataccaccaggcataacagaggctttc +ggtgtacccatcaagcaaatccagatacataagtctggagagttctgccgcctcagattcccaaagccaatt +agaactgatgtgactggtatgatactcgaggagggagcgcctgaaggaaccgtggcctcccttctcatcaag +agaccaacaggtgaactcatgccacttgcagccagaatgggcactcacgccacaatgaggatccagggacgc +atggtagggggacaaatggggatgctcttgacaggatccaatgctaaaggtatggaccttggcacgaccccg +ggcgactgtgggtgtccctacatttacaaaaggggtaatgattatgtggttattggagtacacacagctgcc +gcacgtggtggcaacacggtcatctgtgccacccaaggcgttgaaggtgaagcaacactcgagggtggtgac +ggcctgggcacatactgtggagcaccaatactaggacctggtaatgcacctaaactaagtacaaagaccaaa +ttttggcgatcatccaacgccccactgccaccaggaacgtatgagcctgcgtaccttgggggtcgtgatcca +agagttaagggtggaccatcactccaacaagtcatgagggaacagctcaaaccattcactgaaccacgtgga +aagccaccaaaacccagtgtcctggaagcagccaaaaacaccataataaatgttctggagcagacaatagac +ccaccaccaaaatggtcatacgcacaggcttgtgcatcactagacaagacaacctccagcggttacccacac +cacgtgaaaaagaacgattactggaatggtgaatctttcacaggaaagctggcagatcagggctcaaaggcc +aaccttatgtatgaagaaggaaaacacatgcaacctgtgtacacagcagcactcaaagatgagctggttaaa +acagaaaagatttatgacaagatcaaaaagagactactctggggttctgacctgtcaacaatgatacggtgt +gctagggcttttggtggcctcatggatgagatgaaggcacactgcacaaccctaccagtcagagtgggcatg +aatatgaatgaggatggaccagtgatcttcgaaaaacactccaggtataagtgccattatgatgcagactat +t-cgagatgggattccactcaacaaagggcggtgttggccgcggccttggaaatcatgg-tcaaattctctg +cagaaccacaatt-ggcacaaatagtggcggaagacctcctcgcccctagtgttgttgatgttggcgacttc +aaagtgtcgatcaacgaaggtctaccatctggagtgccttgcacctcccagtggaactcaattagtcactgg +ttgctaacactgtgtgccctttctgaagtgacaaacctatcacctgatgtagtgcaagccaactcaatgttc +tcattctatggtgatgatgaaatagtgagcacagatataaaagttgaccctgctaaattaacagcaaagctg +aaggagtatggtctgaggccgacacgcccagacaaaactgagggacccttagttttgagtgagaacctggct +ggactgacgtttctacgaaggtcaatcacccgagacccagcggggtggttcggaaagttagaccagagctcc +attttaagacaaatgtactggaccaaaggacccaaccacgatgaccctaatgaaaccatggtcccgcactcc +caacgaccagtacaactgatggcacttttgggtgaggcagcactgcacggtccttccttctacagtaaaatc +agcaaattggtaataacagagcttaaagaggggggaatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggagatcgcaatctggctcccagttttgtgaatgaa +gatggcgtctaaggacgcatcgccatctac---ggatggtacagccaacctcgttccagagagtcaacagga +ggttttggctttgcaaccagttgctggcgcacaaatagctgcacctgtagctgggcaattcaatgtaattga +cccctggatatatcaaaattttgtgcaggcgcctgagggagagttcaccgtgtcaccccgtaactccacagg +tgaaatcctaatgaatttggaattaggtccacagttgaatccttatttggcccacttggcacgcatgtacaa +tgcttatgctggcggttttgaagtgcaagtgctgctggccggcaatgctttcaccgc---gggtaagataat +tgtgtgtgccgtgcctccaaacttccctctgcaaaatatatcagctgcacaggccacacaacttccccatgt +tgtggttgatgtgagacaattggaacccgtggtcctacctctcccagacgtgcgtgcgggcttctaccatta +caatcaggttgaagag---tcccgtatgcgtttggtggccattttgtacactccattgaggactaattctgc +aggtgacgatgcatttacagtctcctgccgcatcctcaccagaccagcacctgattttagcttctttttctt +aataccccccacaatagaatctaaaacaacacctttcactctgcccaggttgccaatatctgagatgacaaa +ctctaga---ttccctcttgtgataaagggtatggtcgtggatcctaatcttccattgcaagctaacttcca +aaatggtaggatcacactggatggggagctccagggtacaacactacccacttcaaccagcattggcaggat +ctctggca--------------------------------------cccacatgtccagca----------- +-----------ccccaag------------------------------------------------tag--- +--g----attata---------cagcatgaggactccggtg------attccacc-cagccc--agagtctt +caatccagtgtgg---atggatttaactgagaacaactggactgaattccagccattcaatgaccaacccgc +cccacttgggtgcccagacttcaaagccaaaatattgggcacattgattc---------------------- +-------------------------------------------------------gccagcctaataatggt +tcctatt----------attttgatgcatatctagataccagacaacatggcacttttgcaccatacaccgg +gcacgccgctgtccactctgaccaacaggcaggccatttagcccaaggctacaaaattcaattctccccaac +agg---cattgagagtgaccaaaacactgacttgaacca------------------------gcttcccga +ctatggaggggcc-atgact------gtcagcaaggggctggctccagcggccgcgcccgatttccccggtg +agatgatcctttactttgtctctgacatgccagtccgtaacccaaatggggaa------------aggag-- +ggacactgagatcttgtgtttgctgccgcaggagatggtcacccacttctacgaacagcaagccccctccca +gggtgatgtcgcgcttgtgcgttacatcaatgccgagactggtagagtcatgttcgagggaaagctgcatag +aaatggattcttcacagtttctgccactgcaagaactttaattgt------acctgatggatatttcagatt +tgactcttgggttaataggttttacacattaagccccatgggaacaggcaatggccgcaga---------ag +ggctcgcatgcttgagtaatggctggagcgttctttgcaggtttgggtgctgaccttttaacaacaggtgtc +agctctttagtttctgctgg---agccacagcaatcaaccagagggcagaatttgagtataacaaggca--- +------------------------------ctacaacagagctcattccaacatgataaagaaatgctgcaa +gcccagatagctgccactgccaacttgcaaaaacagatgatagatatcaaaagggagatcctcacacaaggt +ggcttttcccccacggacgctgctagaggttctgtgggtgcaaacatgacccagatacttgattggagtggg +acgcgatactatgcaccaggggctatgagaacaacaccctactctggaaactttctgaggcagagtgtcccc +cacac------------------------------------------------------------------c +acaccaa----------------aggctaactacagacaggcaggccaa----------------------- +------------------------------gaccctagcaccgagtcattgtactcagg----gtcatggag +tgggtcat-----------ataagag------tggttcgaccaataccactgctgtct-------------- +----------ctgcatc--------------------aacagcatcgag----------------------- +------------------------------------------------------------------------ +---------------------------------------------cagaacctcagattgggt---gtcaca +acactcaaacttggcccctttccatg---aaaacgctctcaggacagcatatgtgtcacccccttcaacagt +ttcttca---cat---------------------------------------agtgtttccacagttagagg +cagtttattgga-ctcttggacccctgcat------------tcaacacccataggcagccagcttttgccc +atctgagaaagagagggatttctga--------agcttga---------------aaataatcactaa--tg +attaaa-attctaatttt-gtaatcagtgaa---atgtaa--------at-tcatgat----tctttcttta +t------------ttgc---attt------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ196293.1/1-7559 |Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/1, complete genome +----gtgaatgaagat---ggcgtctaac-ggcgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtaggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagggttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cacttaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggacgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaatctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196294.1/1-7521 |Norovirus GII/Hu/JP/2000/GII.P12_GII.12/Saitama/KU16, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +agg---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcctccacctaacgg------ggaggatgaaccagtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagctcaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggagccatt +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactttctctgttctg +gagaccagtgtatacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccttaccaagactggaataggaaacccct +tcccaccatggatgactccaagttgaagaaggtagctaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaaaatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgagaacaatcacatgactgccctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagctaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaacccaccttgccag +ggaattggccaagagaatcgcagcttctctcacaggggaccagcgtgtgggtctcatccctcgcaatggtgt +tgatcactgggacgcatataaaggagaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagatgcccctgaggtcgagaaggcaa +agcgcgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgctcgagcatcggggctactccatgagaggttagatgagtacgagctgcagggcc +caacccccaccaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgatggacacaatgagagttggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaatatctcaattaatagttgtcagatagtgtatggtggctgcacctataagcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggtgccc +tacatcatcttaggtgtgccagaattagatattatgtcaagtgtgttcaggaggccctatattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgacgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaaatactccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggggtttccatcaaacaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcctagaagaaggtgcgcccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctaacaggatccaacgccaagagtatggatctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgtggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaag +ttctggagatcatccacagcaccactcccacctggtacctatgagccagcctaccttggcggcaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgat +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaatggggagtcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcgaccatggtccggtgc +gctcgagcgttcgggggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aacatgaatgaggatggtcctatcatctttgagagacactccagatacaaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgcatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactttctgaggttacaaacctgtcccctgacatcatccaggccaactctctcttt +tccttctacggtgatgatgagattgtgagcacagacataaagttggatccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgataagactgagggaccccttgttatctctgaggacctgaat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagttggaacagagttca +atactcaggcaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggtccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggggagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaacttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcaggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaatattggt +gtttgccgcagttccccctcattttccactagaaaacataagccctggtcagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttccagatgttaggaataatttctttcatta +taatcaacagaatgaa---ccgaggatgagactcgtggcaatgctttatactccccttagatctaatggttc +tggtgatgatgtatttactgtctcttgcagggtgctcacccgaccttcccctgattttgattttaattactt +ggtcccccctaccgttgaatctaaaactaaacccttcacactccctatcttgactataggggagttgaccaa +ctccagg---ttccctgtgcccatagatgagctctacaccagtcccaatgagagtctggtggtgcaacccca +gaatgggagatgcgcgctagatggggagctgcagggcacgacccagctcctccccacggcgatttgctcatt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggagaaaacca-------------------------------------------------tg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacatcaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagccaga---gggaccatgata---- +-------------------------atgcctgt--------aga-----------agtcatgatgcagtaat +tgcaaccaactctgccaaatttactccaaaattgggcgctatacaaattggca---------catgggaaca +agacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaaaatgaag---------------gtttcaaccagtggacactccccaa +ttactcaggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaatccttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtctcttgccccaagagtggatccaacatctttaccaagagtcggccccttcaca +atcagatgtggcattgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggttacattacagtggccaatactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcagg---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggctaatgcaataaatcaaaaagtagactttgaaaataacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccactaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccctactgacgcagcaagaggggcagttaatgcacctatgactcaggtcttagactggaatggg +accaggcattgggcccccggagccacgaaaaccactgctttctccggtggattcaccaatg----------- +-------------------------------cttctca---------------------------------c +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacaccagccacaccagcccctgcgtctgtttctagac----------ctag +c---tcta-----------ttgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttctaaccc------ttcttct---------------------------t +cagctag--------gagttcttctagtgtttcttctcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacacacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatg--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaagat--------tcttt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196295.1/1-7543 |Norovirus GII/Hu/JP/2010/GII.P7_GII.7/Musashimurayama/TAKAsanKimchi, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaataacgccaccccttctaacaaagaagaggt------cggtgcattctccaacat +caaagttggattcaagaaaa----tgctgggtgccgtacccaagggcatc-------------aaagcaccc +agcagtgg----------------tcaacattgccccacagttaagatcgggcctaaaacattaacaatccc +ccc-----------------------------tgagcccccaaatgg------tgaagac------accgta +cagtttgatg----------caaagtcagaaactataattgggttgccagacttgacaacggt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccattaagtgagagggagcacagaccggccactgaaccact +tcctggcacaatattggagatgtgggatggtgagttttaccattactccgtgtacgtcagcgacggcaaagc +tctgggggtccacaaaccaccggcggctataagcctcgcgacgatagagctcacccccatatcactttactg +gaggcccgtttataccccca---attacttggtctccccggacacattaaagggcctcgctggtgagaagtt +cccctacacggccttcagtaacaactgttataacttctgttgctgggtgctagagctcaacgacacgtggct +taa---cagaagatgcatttccagaactaccggcttcttcaaaccataccagtcttggaacaggaaacctct +cccaaccgttgatgatgggaagatcaaaaaggtggccaacgcgatcctctgcgcactcggctcgctgttctc +aaaaccaatcaaagacctattaggcaaactcaagccattgaatctactgcacttgctcgcgtcttgtgactg +gacgtttgcgggtatagtggagacagtcatcttgatggcagagcttttc---aatgtcttctggaccccgcc +agatgtctctaattttgtagcctccctaataggtgattttgaattgcaagggcctgaggacctggctgtgga +gctcgtccccgtggttatgggtggcatagggatggttctcggtttcaccgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcgtgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcaatcgaagatgccgt +cctggatatggaagctatagggaacaaccacctcacaacccttctcaaggacaaagacagcctcacggcttt +catgaagaccctggatctggaggaggagaaggctaggaaactgtccactaaatcatcttcaccggacatagt +cggcaccatcaatgccatactggctaggatagctgctgctagatcccttttacataaggccaaagaggagat +gttcagcaggatcaggccagtggtcgttatgatctcaggcagacctggcattggaaaaacccacatggcgag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgttccgcgcaacggtgt +cgatcactgggatgcctacaggggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agacgccctaacactacaagagctggccgatacatgtccagtcactttaaattgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaacctagtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttctaggagagttgacttcctggtctatgcagagtcaccagaaattgaaaaggtca +agagagacttccctggccagcctgacatgtggaaagatcattttaagccagacttctcccacatcaagctga +ccctagccccccagggtgggtttgacaaaaatggcaacaccccacacggcaagggtaccatgcggtccctaa +cccaggggtccctgactgcgagagttgcaggccttgtccatgagaggagagatgagttccagctccaaggga +atgacctccaaacatacaactttgacaccaacagagtctccgcattcaggaaattggctgcagataacaagt +atgggatcatggagacgatgagagtgggtgcggcactcaagaatgtgaagaccctagaagaccttaaaattg +cattgagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaagtaccgagtctcttccaacg +gtaaaggttcagtttctgttgataaagttgaggacaatgcatcccagactgtaaacgaggtacaatcagcac +ttctcaggctcaggcaagcgagggccagatattatatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagga------tctccagaaggttctgct +gggaaaggtgggtcaaaccgaccgaaac-------------ccaggaggtgaatgagcccga-----aaagg +aagtggcacaaggca---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaaggaaggggtaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaattttccgcccgacaaagaaacagaggaaggaggaaaggggtgtgcttggcttagtcaccggctcagaca +tcagaaagaggagaccagatgacttccaaccaaaaggcaacctatgggcagatgacaccaggagtgtggact +acaatgagaggcttgattttgaagcgcccccgagtgtttggtcaagaatagtcccattaggcactggttggg +gattctgggtttcat-ccaaccttctgatcacaacaacacacgtcctgcctaaaggggttaaggagctcttt +ggagttgaaatcaaacaaatccaagttcataagtctggagagttttgcaggtttagattcccaagacctatc +aggccagatgtcacaggactcgtactggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacccacaggtgagatgatccccttggcagtgaggatgggcacacatgcatccatgaaaatacagggcagg +accgttggtggccagatgggaatgcttctcacaggagcaaacgcgaagaacatggacctcggcaccggtcct +ggtgactgcggttgcccctacatctacaaacgcggcaacgacattgttgtcgcgggtgttcataccgcagca +gcccggggaggcaacactgttatatgtgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gaccttggcacctattgtggcgccccaattctgggccctggcaaggcgcctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggtacatatgaacctgcttacctaggaggcaaagaccct +agagtggaaaaaggtccctccctgcaacaagtcatgagagaccagttgagacccttcacagaacccaggggc +aaaccacctagacctgcagtcttggaggaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cccgccaagccatggtcctattcgcaggcatgtgcctcactggacaaaaccacctctagtggcagtccccat +cacgttaagaaaaatgaccactggaatggggagtccttcactggtccacttgcagatcaggcatctaaagcc +aacctcatgtatgagcaggctaaacacgtgcagcccgtgtatacggccgcgctcaaagacgagcttgttaag +actgacaagatctacaagaagataaagaagaggctcctatgggggtcggaccttggcacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagttgtatagctcttccttgcagggtaggaatg +aacaagaatgaagatggtcccattatatttgacaaacattctaagtacaggtaccattatgatgctgactat +t-ctaggtgggactcaacccaacaaaggagcattctttctgccgctatggaagtaatgg-tgcggttctctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcacctagccagcttgatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgtacatcacaatggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgtttt +tcattttatggggacgatgagatcgtcagcactgatatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggtcttgtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcact +ggcctgacgttcctccgtaggtcgattgctcgggacccagctggctggtttggaaagctggaccaagactca +atcctcaggcagctgtactggacaagggggcctaaccatgagaacccgtacgaaagcatggttcctcactct +cagcgggccacacaactcatggcccttcttggtgaggcctcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgcagctccatctaa---tgatggtgcagcaggcctcgtaccagagatcaacaatga +ggtcatgccccttgagcccgtggctggtgcatcgctggcgacaccagttgtcgggcaacaaaatataattga +tccctggataagaaataattttgtacaagctcctgcaggtgagtttacagtttcccctagaaattcccctgg +tgaaattttgcttgatttggagttggggccagaactgaacccctatctcgctcatctggcccgtatgtacaa +tgggcacgctggtggcatggaagtgcaaattgtgttggctgggaacgcgttcacagc---tggcaagatcat +atttgctgccatccctccagggttcccatatgaaaatttgtcgccttcacaaatcacaatgtgccctcatgt +tataattgatgttagacaattagaaccagttctactacctatgccagatattagaaacaacttcttccatta +caatcagggcaatgat---ccaaaattgagactgatagctatgctctacacccctttaagggctaacaattc +tggtgatgatgtgttcacagtttcttgtagggtcctcactaaaccgtcacctgattttgagttcacattttt +ggtcccccctacggttgaatctaagaccaaacagttcacattgcccatcctcaaaatatcagagatgaccaa +ctcaaga---ttcccagtgccagtggaaatgatgtacacagccaggaatgagaaccaagttgtccagccaca +gaatggtagggtcacacttgatggcgagctattaggtaccacacccttgttggctgtcaacatctgcaaatt +caagg-----------------------------------------gggaggtcatagctaa---------- +----------gaatggagatgt-----------------------------------gagatcctatag--- +--gatggata-------------------------------------------------------------- +-----------------tggaaattaccaacactgatggcaccccaattgaccccacagaagacacacctgg +tcccattggttcacctgactttcaaggtatactctttggcgttgccagccaac---gcaacaagaatga--- +------------gcaaaa-----ccctgccacg--------aga-----------gcccatgaagccaacat +taacactggtggggaccaatacgcccccaaattggcccaagtgaaatt---ct---------tctcagagtc +ccaggattt---cgaggtgcaccagcccacag---------------------------ttttcaccccag- +--------ttggtgtggcaggcg---acactt---------cccaccctttcagacagtgggtcctgcctcg +atacggtggacat-ctcacc------aacaacacccacttggctccagcagtggcccccttattcccaggtg +agcagattctgttctttagatcacaaataccca------gctcaggcggcca------tgaat--------- +--tgggttacatggactgccttgtcccacaagaatgggtccaacacttctatcaagaagctgccacagctca +gtctgaggtggcactcataaggttcatcaacccagacactggcagagtcctctttgaggccaagctgcacaa +gcaaggctttataactgtggctcacactggtgataacccaattgtcatgccaccaaatgggtactttagatt +tgaagcctgggttaatcagttttactcactcgcccccgtgggaactgggaatgggcgcagg---------ag +gatcc---------aataatggctagtgctttctttgcaaatttggcaggaggcgttgcctccaatggaatt +agttcacttataaatgctgg---ggctaatgctatcaaccaaaaggttgagtttgattataataaacaa--- +------------------------------ctccaaaatgcatccttctcccatgataaggaaatgctccaa +gcccaaattgaagccactaaacgtctgcaacaagagatgattgacataaaacaaggggtgctgacagctgcg +ggattctctcctacagatgccgcgaggggttctgtcggcgcgccaatgacaaaattagttgattggagtggc +actagatattgggcgcctggtgccatgaggacaacaggctattcagggacttttactcacttgccccctgtg +ca-----------gtctgcttcatatgtta-----------ata---------------------------a +tcaaaatg--------------gacaatttcttaaag----------------------------------- +----------------------------------------tagatccttctcctcc---------------- +---ttctt-----------cgagtgg------------ttcttctgtttcttctg----------------- +---------------------tcaaaacaca---atcaactaccctctcagg-cacttcaag--------gg +tgggctc----c---tcatc-------------------tcagtcaaccctgt---------cgaccaggcc +gagcac-------------------a--------------------aggacatctgattgggtgcgcagcca +gaatgaaaggttgagtcccttcatgg---atggagcgttgcaaacaacgtatgtaacgccaccatccagtag +ggcatca---agtg------------------------------tcagca---cagtctcgaccgtgccgaa +agaggttttgga-ctcctggacgcctatgt------------ttaacactcacaggcagccactcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaagattg-------- +-------gtt-aggaaag-ttgattagtttgttcttcctttc------ta-ctattcct---ttaattcttt +c------------tttt------------------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196296.1/1-7560 |Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/105, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgttgaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatacttttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaagttggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcaaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagaccttaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagctggtgccc +tacaccacctaaggtgtgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaggtac---t +acgaggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggcgtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacgggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaaggccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatctcttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaatatgatttggttattccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccataacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------ccttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------cttttt +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196297.1/1-7529 |Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Fukuoka/KK282, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcacc-------------agagctccc +agcagtgg----------------tcaacattgccccacagttaagaccgggcctaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataatcgggctgctggacttgacaacggt---gcaaaa +cgagcatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaatttttccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggccttcagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcaagcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcgatcctctgcgcacttggctcactgttctc +aaaaccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaactttgagggcgatcgaggatgccgt +cctagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcgcggcttt +tatgaagaccctggacctagaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggatgactacggtatggggagccctgttaa +agatgccttaacactacaggagctggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgactatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctttagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggtaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtgaagaccttggaagatctaaaatttg +cactaagggatgtaaaattcaatgagtgtgaaataatttacaagaactctaggtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgagaacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgaggc-------------ccaggaagtgaatgagtccga-----aaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctatgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaaa +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggcgtccacaccgcagca +gcccggggaggtaacactgtcatatgcgccacccaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaccccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtcccctagcggatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggtctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcttgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaaggggacctaaccacgagaacccgtacgagagcatggtccctcattcc +cagcgagccacacagcttatggctctccttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaagatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctccattgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcacgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaaaatcct +atttgctgccatcccgcctagctttccctatgaaaatctgtcacccgctcaattgactatgtgcccccatgt +gatagtggatgtgagacaattagaaccagtgcttctgccaatgccagatataagaaatgttttctatcacta +taaccagaacaatagt---cccaaacttaggcttgtagctatgctttatactcctctgagggctaacaactc +aggtgatgacgtgttcacggtgtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ttcaagg---ttccccgttgttttggaccaaatgtatacaagcaggaatgaaaacaccattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaattt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccagttacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagatttccaggccgtgttatatggcgttgcaagccaac---gctcttccag------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgttaatgtgg---atgatc---------agcacccttttagacagtggtccctaccaaa +ctacggtggtcac-cttgcc------ctgaacaatcatttggcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccaa------gcgccggaggcca------cacag--------- +--atggtgctatggactgcttgctgccccaagagtgggtggagcacttctaccaggaagctgccccttccca +atctgacatcgcactggtaaggttcattaaccctgacacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggtcaaccctttctatactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaagaggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccccaactctatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacttgtc-------------ta---------------------------a +tcaaattc--------------caagttctgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttctt-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggtcagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>KJ196299.1/1-7517 |Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T18, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcctccacccaacgg------ggaggatgaaccagtggtt +tcttacagcg----------tcaa---agatggcgtttccggcttgcctgagcttaccactgtcaggcagcc +gggtgaaaccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaattaacaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccggacactctcaggagactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccaccatggatgactccaagttgaagaaggtagctaacatatttttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaagttgaggcctctcaacatccttaacatcttggcttcatgtgattg +gacttttgcaggcatagtggaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcaggggcccgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaataaccacatgactgctctcctcaaagacaaagacagcctggcaaccta +tatgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggtaggccagggatagggaaaacccaccttgccag +ggaattggccaagaaaatcgcagcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctgaccaacccagcaccactggactatgt +caattttgaagcatg-ctcgaggcgtatcgacttcctcgtgtatgcagatgcccctgaagtcgagaaggcaa +aacgtgatttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactga +tgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaaccctca +ccactggttccctcatcgcacgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacccccactaccttcaactttgaccgcaataaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaggatgtcaggaccatgccagagctcaaacaag +cactcaagaatatctcaatcaagagttgccagatagtgtatggtggctgcacctatatgcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaatgctactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttaggtgtgccaggattagatactatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtttcatccgacgacatcaaaaccgagggcaagaaaggaaagaaca +agtctggccgtggtaagaagcacacggcattctcaagcaaaggtctcagtgatgaggagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggatttttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggcttggtcacaggttctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggggtttccatcaagcaaattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +agaactgatgtgacaggcatgatcctagaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagagggaatgactacatagtcattggagtccacacggctgct +gcccgtggaggaaacaccgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +aacaagggaacctactgcggcgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaag +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaggacccc +agagtcaaaggtggcccctcattgcaacaagttatgagagaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgat +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgttcgaagagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatctggcgaccatgatccggtgt +gctcgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataagtatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcagccttagaaatcatgg-ttaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctcccccagcgtgatggacgtaggtgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaattggacccagagaagttgacagcaaaactt +aaggaatacgggttgaaaccgacccgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtaacccgcgacccagctggctggtttggaaagctggaacagagctca +atacttaggcaaatgtattggactaggggccctaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtcttgtaccagaggctaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatattataga +cccctggattagattaaattttgtgcaggctcccaatggagagttcacggtttcaccccgcaactcgcccgg +ggaagtcctattaaatttggaattaggccccgaactaaatccatacctagcacacctttctagaatgtataa +tggttatgcgggtggggttgaggtgcaagtactactggctgggaatgcgttcacagc---tggaaaactggt +gtttgccgcagttccccctcattttccattagaaaatataagccctggccagataactatgttccctcatgt +aattattgatgttaggactttagaaccagttttgttgccccttcctgatgttaggaataacttctttcatta +taatcagcagaatgaa---ccgaggatgagacttgtagcaatgctttatactcctcttagatctaatggttc +tggtgatgatgtattcactgtctcctgcagggtgctcacccgaccttcccctgattttgattttaattattt +ggtcccccctactgttgaatctaaaaccaaacccttcacactccctatcttgactataggggagttaaccaa +ctccagg---ttccctgtgcctatagatgagctctacaccagtcccaatgagagtctggtggtgcaacccca +gaacgggagatgcgcactagatggggagctgcagggcacgactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gccggatcaatcagaaggtga----- +----gtggggaaaacca-------------------------------------------------cg---- +-----------------------------------------------tttggaat----------------- +----------------atgcaggtcaccaacattaacgggaccccttttgatccaacagaggatgtcccggc +tcctctaggcaccccagatttctctggcaagctctttggtgtactaagccaga---gagaccatgata---- +-------------------------atgcctgc--------agg-----------agtcatgatgcagtaat +tgcaaccaactctgccaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaacgatgt---gcacatcaaccaacctacta---------------------------agtttactccag- +--------ttggcttg---tttgaagatgaag---------------gtttcaaccagtggacactccccaa +ttattctggagcc-ttaaca------cttaatatggggttggcccctcctgtggcccccaccttccctggtg +aacaaattcttttctttagatcccacattcctc------ttaaaggaggtgt------ggcgg--------- +--acccagttattgattgtctcttgcctcaagaatggatccaacatctttaccaagagtcggccccctcaca +atcagatgtagcactgattaggtttacaaatccagacacaggacgtgttctatttgaagcaaaattacacag +gagtggttacatcacagtggccaatactggtagcagaccgattgtcgtaccagctaatggttacttcaggtt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgcaga---------ag +ggtgc---------aataatggctggagcttttatagcagggcttgctggtgacatagtcaccaatggcatt +ggctcacttgtgaacgctgg---ggccaatgcaataaatcaaaaagtagactttgaaaacaacaagcaa--- +------------------------------ctacagcaggcttctttcaaccatgataaagagatgctgcaa +gctcaagtccaggccaccaaacagctgcaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggggcagttaatgcacctatgactcaggttttagactggaatggg +accagatattgggcccccggagccacgaaaactactactttctccggtggattcaccaatg----------- +-------------------------------tttctca---------------------------------t +gccagaa----------------ctgtcgacctgaccaag-------------------------------- +----------------a--agacatcagccacaccagcccctacgcctgtttccagac----------ctag +c---tctg-----------tcgcc------------tctacagtctccacccgctc---------------a +accttggttagcgggt-----cttccaatcc------ttctttt---------------------------t +cagctag--------gagttcttctagtgtttctactcaacccacctcct---------------------c +ctcttc---------------------------------------tcggaccagtgagtgggtgcgcagcca +aaacagggcactggagccttacatga---ggggagcgctacgcacagcctatgtgacgcctccctctagtag +agcttct---agta------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacccgcagacaaccgctattcgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagata--------- +---a-t-c-t-ttattt---tct---tt------cct------------t-tgaaga------------tt- +---------------tt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KM198480.1/1-7443 |Norovirus Hu/GII/10116/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------gtggattg---ttaatctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaaatagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctcactcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacagggacgggtgcccaaaacccaaa-- +-gat----gatgggg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaacaatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactttataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgctcgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactgga---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198481.1/1-7443 |Norovirus Hu/GII/10054/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcctccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttggg-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198482.1/1-7431 |Norovirus Hu/GII/10114/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198483.1/1-7414 |Norovirus Hu/GII/10313/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaacgttcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactgggacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggaggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcagatagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtactcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggaccggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198484.1/1-7425 |Norovirus Hu/GII/30212/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggctaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagcaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggagataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagccgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtgctcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaacaactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaacgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198485.1/1-7443 |Norovirus Hu/GII/10148/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctttcgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagcgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggcttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacatcgaggaagagaaagccagaaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaataggaaaaacccaccttgccag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacccgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagcccttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttggtcacaggttctgaaa +tcaggaaaaggaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctcac-ccagcctgttcataacatcaacccacgtcataccccagggcgcgaaggagttcttt +ggagtccccatcaagcaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcggctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcagggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggc +aaaccgccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatttcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttcttactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaagaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatatactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtctttactgggagaggccgcactccacggcccaacattctatagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagacaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagcgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagca---------ccgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattaagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtaga---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccaatttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttacaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacact---------------------------------g +ccaggaa----------------gaaccaatcccaggacccc------------------------------ +------------------------------tacccccgcccggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198486.1/1-7419 |Norovirus Hu/GII/C2H-18/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +------------------------------------tccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttctttccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagataaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgttcaaccaca +aaatggtagatgcacgaccgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +cccactgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctcc------------------ag +tgcatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198487.1/1-7425 |Norovirus Hu/GII/10110/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +------------------------------gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccgctcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaagttacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgtttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgttaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttccgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcggtgcctttgttgtccaaccgca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccccgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagccca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198488.1/1-7443 |Norovirus Hu/GII/10325/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatggactagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctctcttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaata +agactggccgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggataaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcgcctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggatctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggtgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcccttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198489.1/1-7431 |Norovirus Hu/GII/10101/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgcttccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggct +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcagatattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgctcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccactccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcccggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198490.1/1-7431 |Norovirus Hu/GII/10002/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcctccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggaagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcgccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccctatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaagagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcgattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcttgggttaaccaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tatgatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgaa-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198492.1/1-7366 |Norovirus Hu/GII/30448/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggatgacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccagggatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggataaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtctgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaaacccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaagcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacccaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaac +ctgcttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198493.1/1-7413 |Norovirus Hu/GII/30468/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------gctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggaaaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +acgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggccgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacttaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattccctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatgggactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacgtctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagatcttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgcaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198495.1/1-7430 |Norovirus Hu/GII/10193/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +------------------------ctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcatcgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttagattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198496.1/1-7425 |Norovirus Hu/GII/20419/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccaccctacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgccaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgagaactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgatttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcatcatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccactcccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaactggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198498.1/1-7440 |Norovirus Hu/GII/20088/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggc------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaatagttaagattgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------attgta +cagtttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacatagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagcctcgcgacgatagagctcacccccatatccctatattg +gaggcccgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacttactgcacctgctcgcgtcgtgtgattg +gacgttcgcaggtatagtggagacagtcatcttaatggcagaacttttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgagttgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +tatgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccttgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaatcacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctagaagaagagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcaccatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcagacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacagaggagagagagtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagctagctgacacatgcccagtcactctaaactgtgataggatcgagaacaa +gggaaaaatgttcgacagtgatgtcattataatcacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggattcgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgactgcaagagttgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgagagtgggtgcagcgctcaaaaatgtcaaaactttggaggatctgaaggtcg +ccttgagagatgtaaagttcaatgagtgtgagataatttacaggaattctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatattatgtcagctgcttccaagacctcgtctacaccctcatac +aggttgctggggcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaagatgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttta +agagaatcagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagata +tcaggaagaggaggccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgttctgcccaagggggtcaaggaactcttt +ggggtcgaagtcaaacagattcaaatccacaagtctggagagttttgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcataaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctataagcgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcaaggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctaggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggtacgtatgaacctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcggttttggaggaggctaaaaagacagtgatgaatgttctagaacagactattgac +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggaagcccccac +catgttaggaaaaatgaccactggaatggggagtcttttactggtcccctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtatacggccgcgctcaaagatgagcttgttaag +actgataagatctacaagaaaataaagaagaggcttctatgggggtcagaccttggtacaatgatcaggtgt +gccagggcttttggcggccttatggacagcatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgagattctctg +ctgaaccagaatt-agcacaagtggtcgcagaggacctcttggcgcctagccagctagatgttggcgatttt +gtcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagattgtcagcactgacatcaaccttgaccccataaaattgacacaaaaactc +agggagtatggtctggtccccacccggcctgataagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggaccaagactca +atcctcaggcaattgtactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctacccagctcatggcccttcttggtgaggcttcattgcatggtccccagttttacaagaaagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccactccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaattcgcccgg +tgagatgcttcttaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtcctcatgt +gattgtcgatgtgagacagcttgaaccagtgcttctgcctctccccgatataaggaacaggttcttccatta +caatcaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaacccttcactttacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgccatagatatgctttatactgatcccaatgaatcaatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattagttccaacacagatttgtgcctt +tagag-----------------------------------------gtaccttgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgattcaacgg--- +--atttcccccag--------agagcccgta----------------atcacccg----------------- +----------ttacatgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggcacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggcacaattctcat---ca---------aatctgaatc +tactgattt---caacacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggtgata---------------------acaattggagacagtgggaactgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccccgctgtttccccatccttccctggtg +aacgaatccttttcttcaggtctatagtaccat------cagctggaggcta------tgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgccgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaaattgcatag +agaagggttcctcaccgtggctaattctggaaataatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattttacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaaccaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacccaacagcatgaaaaccacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgttgtctg-------cagg--------aa +ccgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198499.1/1-7443 |Norovirus Hu/GII/20118/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgtcgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggtacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgttcttgaacaaacagttgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198500.1/1-7413 |Norovirus Hu/GII/C2H-20/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tataac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcccgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttggg-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198501.1/1-7443 |Norovirus Hu/GII/10173/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacacctctctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcgggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcgaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaggttgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198502.1/1-7443 |Norovirus Hu/GII/10136/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggttttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactct------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198503.1/1-7366 |Norovirus Hu/GII/C2033/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaatattcc +acc-----------------------------tcccccgcccaacgg------ggatgacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgttaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaatcagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttatacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgattacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggctagaaatcctgaagttggt +catgaaatggttcttcccgaagaaaaacgaggcaagtgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccagggatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcacggcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +agagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctaccgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaagcaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgat +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaatggcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaaacccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatcttttacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctactgtctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcagattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggtcaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagatttctctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacatctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaac +ctgcttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgggc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198504.1/1-7443 |Norovirus Hu/GII/20151/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaagccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcggaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgtcaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtcacccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198506.1/1-7431 |Norovirus Hu/GII/10199/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gtcgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcccgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacggaaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggcgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198507.1/1-7431 |Norovirus Hu/GII/C2007/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcgacctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttacctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctacttcatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactgccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggagaagaaacccagatgatttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgaaaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatccccaagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcactcata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgccaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198508.1/1-7443 |Norovirus Hu/GII/20066/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacgt +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtg +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaact +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgccgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgatttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactacgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggatcagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgattgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacatct-ggctcaggtggtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgcggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccctgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gctcctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198509.1/1-7425 |Norovirus Hu/GII/20479/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtgggacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgatttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcatcatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggagctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgacgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gtttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccactcccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtaggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtccgaggtcacagatctgtctcctgacatcattcaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacaaatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgtacgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatac--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacacccagcagtgggtcttcagtgaggtca +aactcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198510.1/1-7443 |Norovirus Hu/GII/10012/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacggc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgggggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgccgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagatttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaagtttgtctccagatatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccccgacaaaactgaaggacctctcgttatctctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttttacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcgggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----tttcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198511.1/1-7425 |Norovirus Hu/GII/C2H-24/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcgtttggtcccgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacgcttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198512.1/1-7443 |Norovirus Hu/GII/10062/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctgaccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatctcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaagaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaagtgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198513.1/1-7443 |Norovirus Hu/GII/20494/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198514.1/1-7431 |Norovirus Hu/GII/10079/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgcagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaagtttgtccccagacatcatacaggcaaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatctggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtattgggcccctgatgctaggaccacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggatccc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198515.1/1-7431 |Norovirus Hu/GII/C2H-31/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tcgaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttacagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggttctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctaagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcgtcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcctttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtaactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgacgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagagctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgactttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgactcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcgtctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198516.1/1-7431 |Norovirus Hu/GII/10285/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gtcgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattatctggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgctgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgcgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacgcttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcatcatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccattattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcgtccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggaatgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccagtcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtaagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatacgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaaggcccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---cgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgtcgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------ggtgcagcgggta------cccca--------- +--acatggacttggactgtcttctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatttacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcgct---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198517.1/1-7431 |Norovirus Hu/GII/30399/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttcctctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcagggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagataaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatatt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgctcccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatctcaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198518.1/1-7431 |Norovirus Hu/GII/10182/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaacgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcgggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198521.1/1-7431 |Norovirus Hu/GII/10176/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tttaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcttggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcgcctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198523.1/1-7443 |Norovirus Hu/GII/10204/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagcgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccactttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaagcacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaagaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatgtgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccccagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +tcctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattctggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcgggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacaactt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198524.1/1-7443 |Norovirus Hu/GII/10034/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcctccgctgccgctgttgct------------aacggc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatagatgactccaaattaaagaaggtagctaacattttcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactatcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgccgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaggtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacgattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaagtttgtccccagacatcatacaggctaattcgctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccccgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgctccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatacaggacggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggcagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttttacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----tttcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198526.1/1-7431 |Norovirus Hu/GII/10075/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctta +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaacttcccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagacgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198527.1/1-7443 |Norovirus Hu/GII/10074/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttggg-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198528.1/1-7425 |Norovirus Hu/GII/C2H-25/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaagaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcccgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggccgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgaccatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------tattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198529.1/1-7413 |Norovirus Hu/GII/C2H-27/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgctcccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagagaacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgcactctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggcgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacggaatgagtaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgccctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaagcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcaggagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgacgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctcccttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaaatcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctaactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgaatc +tggagattt---tgatcaaaatcaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttctatcaagaatcggccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacgcttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198530.1/1-7437 |Norovirus Hu/GII/20486/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agcattaacaccgccccttctaagaaagaagaggt------tggtgcattttccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------ccagcactgtcccacagtcaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagat------atcgtg +cagtttgatg----------cgaagtcagaaactgtacttgggctaccagacttaacaacggt---gcaaaa +tgaacatgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactacgccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaataagcctcgcgacgatagagctcacacccatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacagaaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaagccaatcaaagacttgttaggcaaactcaaaccactgaacctgttgcacttgctcgcgtcatgtgattg +gacgtttccgggcatagtggagacagtcatcctaatggcagaacttttc---aatatcttttggacaccgcc +agatgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgcaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaagctataggaaataatcatcttacaaccctcctcaaagataaggatagcctcgcggcttt +catgaagaccctggacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatatctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcaag +acacctggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcctgtgggatgattatggcatgggaaaccctgtcaa +agacgctctaacgctgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggaaagatgagttccagttccagggga +acggcctccaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggactcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaagaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctattgacaaagttgagggccaaacatcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcgtctacactctaatgc +aggtcgccggagcatcgttcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagaagtgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaattagggaagaaaggaacgggaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtagcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagattagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggttcagaca +tcaggaagaggagaccagatgattttcaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattaggaaccggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggcttaaggaacttttt +ggggttgaaatcaaacagatccaaattcacaagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggcagg +accgttggtggccaaatgggaatgctcctcacgggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggctgcccttacatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacaccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgtggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggatcagttaaaaccttttacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaagaatgaccattggaatggagaatccttcactggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagacgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgtagagtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtacagatatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctcacggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagaact-ggcacaagtggtcgcagaggaccttctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtgtcaggtctatcaccagatgttgtccaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggtccccacccggcctgacaaaactgaaggacccctcgtaataactgaagacctcacc +ggcctaacgtttcttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattagaccaggactca +atcctcaggcagttatactggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaggcttcactgcatggcccccaattctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggagttttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagccatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcaatgcagcccaaataaccatgtgtccccatgt +aattgttgatgtgagacaacttgaaccagtgcttttacccctccctgatataaggaacaggttctttcatta +caatcaagaggatacc---ccccggatgaggcttgtggcaatgctttacactcccctgagggc---taattc +tggtgaagatgtttttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatattaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctacaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcatactgattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatatgcaattagagaatcttgatggcacgcagtatgatccaactgatgaagtgccagc +agcccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggac +-----ac---aagtgggg---------gcaacc--------cga-----------gctcatgaggtgatcat +caacactaccgatcctaggtatacaccaaaactgggatccgtcctcat---gt---------attcagagtc +gcaagactt---tgagactggacagccgatcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgactggcaccagtgggagctgcctaa +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------cgggt--------- +--ctggacagatagactgcctcttaccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcattaggtatgtcaaccctgacacaggcagaaacatttttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaataaccctattgttgtccctcctaatggatatttcagatt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggcgacgccataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatttgattttaatagacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgtcagcaaccaagcagttgcagcaggagatgatgaacataaaacagggggcgctgaccgctggc +ggcttctcccccacggatgctgctagaggggccgttaacgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagtagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgaaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtgcatagctcttcttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcat-------cagg--------aa +ctagatc----a---tccag-------------------gtccaccaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtccaggaccagcgactgggttaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctgggctggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198531.1/1-7437 |Norovirus Hu/GII/30116/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctactactgcatttggcagccaa---aactctgtcaat +g------ac----agtattaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaacga----------------ccagcactgtcccacagtcaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagat------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacatgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactacgccatatacgtcagcggtggcaaagc +cctaggggttcataagccccctgcggcaataagcctcgcgacgatagagctcacacctatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgttgaaaggcctcgctggcgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +tag---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacagaaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaaaccaatcaaagacctgttaggcaaactcaaaccactgaacttgttgcacttgctcgcgtcatgtgattg +gacgttcgcgggcatagtggagacagtcatcctaatggcagaacttttc---aacatcttttggacaccgcc +agacgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtctgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaacaatcatcttacaaccctcctcaaagataaggatagcctcgcggcctt +catgaagaccctggacctagaagaggagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +tggcactatcaatgccatactggccagaatatctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaaaacccacatggcaag +acatctggctaagagcatcgccaacaccatgagtggcgaccaaagggtcgggctcgttccacgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcttgtgggatgattatggcatgggaaaccctgtcaa +agatgctctaacactgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcgccccttgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggaaagatgagttccagttccagggga +acggcctccaaacatacaactttgacaccaacagggtctccgcatttaggaagctggccgcagataacaagt +atggactcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccttggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaagaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctattgacaaagttgagggccaaacatcccagactgcgaacgaggtgtgttcagcac +tcctcaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcgtttacactctaatgc +aggtcgccggagcatcgttcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagaaatgggtcaaaccaaccgaggc-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagaaaggaacgggaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtagcagttgcccgggcgacagaggaggacttctgtgaggaggaggaggccaagattagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggttcagaca +tcaggaagaggagaccagatgattttcaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattgggaaccggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggcttaaggaacttttt +ggggttgaaatcaaacagatccaaattcacaagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgctccatactcgtaaag +agacctacaggtgagatgatccctctggcggtgaggatgggcacgcatgcatccatgaagatacagggcagg +accgttggtggccaaatgggaatgctcctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggctgcccttacatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacaccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggatcagttaaaacctttcacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgccaagaaaaatgaccattggaatggagaatccttcaccggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcttatggggatcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgtagagtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacagatatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctcacggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagaact-ggcacaagtggtcgcagaggaccttctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtgtcaggtctatcaccagatgttgtccaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcactgacattaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggtccccacccggcctgacaaaactgaaggaccccttgtaataactgaagacctcacc +ggcctaacgttccttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattagaccaggactca +atcctcaggcagttatactggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaggcttcactgcatggcccccaattctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggcgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtttcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagccatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcaatgcagctcaaattaccatgtgtccccatgt +aattgttgatgtgaggcaacttgaaccagtgcttttacccctccctgacataaggaacaggttctttcatta +caatcaagaggatacc---ccccggatgaggcttgtggcaatgctttacactcccctgagggc---taattc +tggtgaagatgtttttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacccatactaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcagactaattggccag--------- +----------acatcaaggtctccagactt----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccacatgcaattagagaatcttgatggcacgcagtatgatccaactgatgaagtgccagc +agcccttggtgccgttgacttcaaggggaccatttttggagtggccagccaga---gagacacgtcagggag +-----tc---aagtgggg---------gcaacc--------cga-----------gctcatgaggtgaccat +caacactaccgatcctaggtacacaccaaaactgggatccgtcctcat---gt---------attcagagtc +gcaagactt---tgagactggacagccgatcc---------------------------gcttcacaccta- +--------taggaatgggtgagg---------------------acgactggcaccagtgggagctgcctaa +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------cgggt--------- +--ctggacagatagactgcctcttaccacaggagtgggttcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcattaggtatgtcaaccctgacacaggcagaaacatttttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaataaccccattgttgtcccccctaatggatatttcagatt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggccttgctggcgacgccataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatttgattttaatagacag--- +------------------------------cttcaattggcatcattcaaacatgataaagagatgttgcaa +tcacaagtgtcagcaaccaagcagttgcagcaggagatgatgaacataaaacagggggcgctgaccgctggc +ggcttctcccccgcggatgctgctagaggggccgttaacgccccaatgacaaagattctggattggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagtcctgttca +ta-----------ggtcccctgctccttctcagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtacatagctcttcttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcat-------cagg--------aa +ctagatc----a---tccag-------------------gtccaccaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtccaggaccagcgactgggttaggggaca +gaatgagaggcttagcccgttcatgg---atggtgctctccaaactgcctttgtcacacctccgtcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcct---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198532.1/1-7432 |Norovirus Hu/GII/10108/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaacggacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaagcgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaggatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggatt +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaagcaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccgttcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtcgg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgagaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198534.1/1-7440 |Norovirus Hu/GII/30443/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccgctgcccttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttcaaacaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacctaagggcacc-------------aaagcaccc +agcagtga----------------ccagcactgtccaatagttaagattgggcccaaaacactaacagtccc +ccc-----------------------------tgaacccccaaatgg------tgaagac------actgta +cagtttgatg----------caaaatcggaaactgtaattgggctaccggacttgacaacagt---gcaaaa +tgaacatgaaaacaccccatacactgtccctccactgagtgagagggaacatagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattctaccactactccgtgtacgtcagcggcggcaaagc +tctgggggttcacaaacctccggcagctataagcctcgcgacgatagagctcacccccatatccctatattg +gaggcccgtttacaccccca---actacctggtctgcccagacacactgaaaggtctcgctggtgaaaagtt +cccctacacggccttcagcaacaattgctacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---cagaagaagcatctccagaaccaccggcttcttcaaaccgtaccagtcttggaacaggaaacctct +cccaaccgttgacgatggaaagatcaaaaaggtggccaacgcgatcctctgtgcactcggttcgctgttctc +aaagccaatcaaggacctgttaggcaagctcaaaccattgaacctactgcacctgctcgcgtcgtgtgattg +gacgttcgcaggtatagtggagacagtcatcttaatggcagaacttttc---aacgtcttttggaccccgcc +agacgtctctaattttatagcctccctgataggtgattttgagttgcagggacctgaggacttggcggtaga +gcttgttcctgtggtcatgggtggtataggaatggttctcggcttcacagctgagaagataggtcgcatgct +gtcgtccgctgcgtcaacactgcgggcgtgtaaagacttagggaactatgcccttgacatacttaaattggt +catgaaatggttcttcccaaagaaagaggagaaagccgagatggaaaccctgagggcgattgaggatgccgt +cctagatatggaggccataggtaacaatcacctcacgaccctcctcaaggataaagacagtctcacggcctt +catgaagaccttggatctagaagaagagaaggcaaggaagctatccaccaaatcatcctcgccggacatcgt +cggcaccatcaatgccatactggctaggatagctgccgctagatccctcctgcacaaagccaaagaagagat +gttcagcaggatcagaccagtggttgttatgatctcaggcaaacctggcattggcaaaacccatatggcaag +acatttggctaaaaacatcgccaacaccatgagtggtgaccaaagagtcgggctcgttccgcgcaacggggt +tgaccactgggacgcttacaggggagagagagtggtcttgtgggatgattatggaatggggaaccctgtcaa +agatgctttaacactacaagagttagctgacacatgcccagtcactctaaactgtgataggatcgagaacaa +gggaaagatgttcgacagtgatgtcattataatcacgaccaatctagtcaaccctgcacctctcgattatgt +gaacttcgaggcgtg-ctctagaagaattgatttcttggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccctggccaacctgacatgtggaaagactatttcaaacaagacttttcccatataaagctaa +ccctagccccccaaggcggattcgacaagaatggtaacaccccgcatggtaagggcaccatgcgatccctca +cccaggggtccctgactgcaagagttgcaggccttgttcatgagagaaaggatgagttccagctacaaggga +atgacctccagacatacaactttgacaccaacagggtctctgcgttcaggaaactggctgcagacaacaagt +atgggatcatggaaacaatgaaagtgggtgcagcgctcaaaaatgtcaaaactttggaggatctgaaggtcg +ccttgagagatgtaaagttcaatgagtgtgagataatttacaggaactctaagtaccgagtctcttccaacg +gcaagggctctgtttctgttgacaaagttgaggatcacacgtctcagactgcaaatgaagtgggctcagcac +tcctcagacttaggcaagcaagggctagatactatgtcagctgcttccaagacctcgtctacaccctcatac +aggttgctggggcatcattcgttgtca---------------acagaa------tctccaaaaggttctgct +gggaaaggtgggttaaaccaaccgaaac-------------ccaagaagcgagtgagcccga-----aaagg +aagtagctcaaggta---gatgggagatagagcccaaggacacagaaccagaaggcaagaagggtaagaaca +agaaagggagaggcaagaaacacacagccttctccagcaaaggcctaagtgatgaagagtatgatgagttta +agagaattagagaagagaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +atgaagaagtggcagttgcccgagcaacagaagaggacttttgtgaagaagaagaagccaagataagacaaa +gaatcttccgcccgacaaggaagcaaagaaaggaggaaaggggggtacttggcttagtcactggctcagata +tcaggaagaggaggccagacgattttcaaccaaaaggcaacctgtgggcagatgacactaggagtgtggatt +acaatgagagacttgactttgaggctcccccaagcgtctggtcaagaatagtcccattgggcactggttggg +gcttctgggtttcat-caaacctcctgatcacaacaacacacgttctgcccaagggggtcaaggaactcttc +ggggtcgaagtcaaacagattcaaatccacaagtctggggagttttgcaggtttaggttcccaagaccaatc +aggccagatgtcacaggactcgtgttggaggaaggtgctcctgaaggtactgtctgttctatactcataaag +aggcctacaggtgagatgatccccctagcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgtcggtggtcagatgggaatgcttctcacaggggcaaatgcaaagaacatggatcttggcaccggtcct +ggtgactgcggttgcccttacatctataagcgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgttatttgtgccactcagggacaagacggagaggcagtccttgagggaaatgaa +aaccttggcacctactgtggtgctccaattctaggccctggcaaagcgcctaaactcagcacgaaaaccaaa +ttttggcgatcatcaccagatgccctacctcctggtacgtatgaacctgcttatctggggggtaaggatccc +agagtggaaaaggggccctccctacagcaagttatgagagaccagctgaaaccattcacagagcccaggggc +aaaccacctagaccagcggttttggaagaggctaaaaagacagtgatgaatgttctagaacagactattgac +cctgctaaaccatggacctactcacaagcatgtgcttcactggacaagaccacttctagtggaagtccccac +catgttaggaaaaatgaccactggaatggggagtcttttactggtcctctcgcggaccaagcatccaaagcc +aacctcatgtatgaacaggcaaaacatgtgcagcccgtgtacacggccgcgctcaaagatgaacttgttaag +actgataagatctacaagacaataaagaagaggcttctatgggggtcagaccttggtacaatgatcaggtgt +gccagggcttttggcggccttatggacagcatgaaagcaagttgtatagcccttccatgcagggtggggatg +aacatgaatgaggatggccctatcatatttgacaaacactccaagtataggtaccactatgatgctgactac +t-ctaggtgggactcaacccagcaaaggagcattctttccgccgccatggaggtgatgg-tgagattctctg +ctgaaccagaatt-agcacaagtggtcgcagaggacctcttggcgcctagccagctagatgttggcgatttt +atcatctcagtccaggagggcctgccatcaggagtcccatgtacatcacaatggaattcaatagcgcactgg +attctaactctgagcgcaatggcagaagtgtcaggtctctcaccagacgttgtccaagcccattcctgtttt +tcattttatggcgacgatgagattgtcagcactgacatcaaccttgaccccataaaattgacacaaaaactc +agggagtatggtctggtccccacccggcctgacaagactgaaggccccctcgttataactgaagacctcacc +ggcctgacattcctgcgtaggtcgattgcacgggatccagctggatggtttggaaaattggaccaagactca +atcctcaggcaattgtactggacaagggggcccaatcatgaaaacccatacgagagcatggttccccactcc +cagcgagctacccagctcatggccctccttggtgaggcttcattgcatggtccccagttttacaagaaagtc +agcaagatggtcatcaatgagattaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcttcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagtttactgtttcaccaaggaactcgcccgg +tgagatgcttctaaatcttgaattgggcccagaacttaacccctatttgagtcatttgtcccgcatgtacaa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaagatcat +ctttgccgctgtgccaccacacttccctgtggataatattagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttctgcctctccccgatataaggaacaggttcttccatta +caatcaggaaaacacc---ccccggatgagactcgtggccatgctctacacgcctctaagggc---taattc +tggagaggacgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgaatttacattttt +agttccaccaactgttgaatcaaaaacaaaacccttcactttacctattctaacccttggtgagttgtctaa +ttcccgt---tttcctgctgccatagacatgctttatactgatcccaatgaatcgatagttgttcagcccca +aaatggtagatgcacccttgatggcacattgcaaggcacaacacaattggttccaacacagatttgtgcctt +tagag-----------------------------------------gtaccttgatcagccag--------- +----------actgcgagagcg------gc----------------------------cgattcaacgg--- +--attccccccag--------agagcccgta----------------atcacccg----------------- +----------ttacatgtccaggtcaagaacctagatggcacacagtatgacccaacagatgacatccctgc +agtcctgggggctattgatttcaaaggtacagtgttcggagtggcaagtcaga---gggacgtctctggaac +-----ac---aagaacagggccattatgccacc--------cgg-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacctaaattaggcacaatcctcat---ca---------aatctgaatc +tactgattt---caacacaaatcagcccatta---------------------------ggttcactccag- +--------tgggcatgggtgata---------------------acaattggagacagtgggaactgcctga +ctattctggtagt-ttgact------ctaaatatgaaccttgcccccgctgtttccccatccttccctggtg +aacgaatccttttctttaggtctatagtaccat------cagctggaggcta------cgggt--------- +--ctggctatatagactgtctcataccccaggaatgggtgcaacacttctaccaggaggcagcaccttcaca +atctgctgttgcactggttaggtatgtcaaccccgacactgggcgtaacatctttgaggccaaattgcatag +agaagggttcctcaccgtggccaattctggaaataatcctattgtggttccccctaatggttattttagatt +tgaggcttgggttaatcaattttacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggctc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggttccctcatcaatgcagg---tgctaatgcagtcaaccaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgataaggagatgttacaa +tcacaggtgttggcaaccaaacaactgcagcaggaaatgatgaacataaagcaggggatgttgaccgctggc +ggcttttcccctgcggacgctgctagaggggctgttaacgctccaatgacaaaaatactggactggaatggc +acaagatattgggcacccaacagcatgaaaaccacaagctattcagg-acagttctctagtagccccgtcca +ca-----------ggtctcctgctcccctccagcacactgcccc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtgtgtatagctccccttccactgtttcttcac----------------- +---------------------aatcaactca---ttcaacagtgttgtctg-------cagg--------aa +ccgggtc----g---tccag-------------------atccacccccacgt---------ccacagcaac +ctccac-------------------cct--------------gtctaggaccagcgactgggttagaggaca +aaatgagaggcttagcccgtttatgg---atggtgctctccaaactacttttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cagtctcgaccgtgcccaa +agctgttttgga-ctcctggactcct---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198535.1/1-7431 |Norovirus Hu/GII/20092/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcacccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198536.1/1-7443 |Norovirus Hu/GII/20079/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagctttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttattcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagtaatgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198537.1/1-7443 |Norovirus Hu/GII/10137/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggcctttagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctaaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaattttgaccgcaacaaagtgcttgctttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ctagcctatttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatgggtttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgccgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggggcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaacggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgtt---------------------------------g +ccaggca----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttggacctcctggactgg----------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198538.1/1-7443 |Norovirus Hu/GII/10051/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagatactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagggaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgtttttagttctgacttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccagagcacctccgtacagaccaacaatgagctcgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcatacccaagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggagac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaataatgaaagccaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtattgggcccctgatgctaggaccgcaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttggg-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198539.1/1-7414 |Norovirus Hu/GII/C2H-36/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctaagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcgtcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtaggccagggatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcctttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcgttcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaattgagggcaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtaactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaactggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatctgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagagctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgactttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgactcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaaccaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctct------------------ag +tacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggcc---cagtctcaaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198543.1/1-7431 |Norovirus Hu/GII/20357/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------cctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +tactggaacgattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggatcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgctgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacatacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgacgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaattagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagtcgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacctacagtcgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198545.1/1-7443 |Norovirus Hu/GII/10195/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttttggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggctgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaagtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagctttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaagctcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaacgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcacatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttgaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198546.1/1-7414 |Norovirus Hu/GII/20067/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +tgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagccccccaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ctaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaagactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgcttttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198547.1/1-7421 |Norovirus Hu/GII/C2H-47/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcctttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaacgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcctcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccaggt----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggtcag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcggtcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggcgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198548.1/1-7443 |Norovirus Hu/GII/20107/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---gaagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198549.1/1-7434 |Norovirus Hu/GII/30473/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgctaccactgcctttggcagccaa---aactctgtcaat +g------ac----agcattaacaccgccccttctaagaaagaagaggt------tggtgcattctccaacat +caaagttggatttaagaaaa----tgctgggtgccgttcccaaggggacc-------------aaagcaccc +agcaatga----------------ccagcactgtcccacagtcaagatcgggaccaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagat------atcgtg +cagtttgatg----------cgaagtcagaaactgtgcttgggctaccagacttaacaacggt---gcaaaa +tgaacatgagaacacaccatactcagtccccccattgagtgaaagggaacacagaccagccactgagccgct +ccctggcacaatactggagatgtgggatggtgaattctaccactacgccatatacgtcagcggtggtaaagc +cctaggggttcataagccccctgcggcaataagcctcgcgacgatagagctcacacctatatctctttactg +gaggcccgtttacaccccca---actacctggtctgcccagacacgttgaaaggcctcgctggtgagaagtt +cccctatacggccttcagcaacaactgttacaacttctgttgctgggtgcttgaactcaatgacacgtggct +taa---caggagaagcatctccaggaccaccggcttcttcaaaccataccagtcttggaacagaaaacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaatcctctgtgcacttggatcactgttttc +aaagccaatcaaagacttgttaggcaaactcaaaccactgaacctgttgcacttgctcgcgtcatgtgattg +gacgtttccgggcatagtggagacagtcatcctaatggcagaacttttc---aatatcttttggacaccgcc +agatgtttccaacttcatatcctccctgataggtgattttgaattgcaagggcctgaggacctggccgtgga +gctcgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacactgcgggcatgtaaagaccttgggaattatgcccttgacatactaaaactggt +tatgaaatggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctggacatggaggctataggaaataatcatcttacaaccctcctcaaagataaggatagcctcgcggcctt +catgaagaccctggacctagaagaagagaaggcaaggaagctgtccaccaaatcatcctcgccagacatcgt +tggcactattaatgccatactggccagaatatctgctgccagatccctcctgcacaaggctaaagaagaaat +gtttagtaggatcagacctgtggttgttatgatctcgggtagacctggtattggcaagacccacatggcaag +acacctggctaagagcatcgccaacaccatgagtggcgaccaaagagtcgggctcgttccgcgcaacggggt +cgatcactgggacgcctacaggggggagagggtggtcctgtgggatgattatggcatgggaaaccctgtcaa +agacgctctaacgctgcaagagttggccgacacctgcccagtaactctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggttgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagatttccccggccaacctgacatgtggaaggaccactttaagccagacttctcccatataaaactga +ctctagccccccagggtggatttgacaaaaatggtaacaccccgcatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggaaagatgagttccagttccagggga +acggcctccaaacatacaactttgacaccaacagggtctccgcatttaggaggctggccgcagataacaagt +atggactcatggaaacaatgagagtaggtgcggcgcttaagaatgtcaagaccctggaagatctgaaagctg +ccctgagggatgtgaagttcaatgagtgtgagataatttacaagaactccaaatatcgaatctcctccaacg +gtaaaggttctgtctctattgacaaagttgagggccaaacatcccagactgcgaacgaggtgtgttcagcac +tccttaggctcaggcaggcaagggccagatactatgtcagctgcttccaagatctcgtctacactctaatgc +aggtcgccggagcatcgttcgttgtca---------------gcagaa------tttctaagaggttctgtt +gggagaagtgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaagta---gctgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaagaggcaagaagcacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagtaca +agagaatcagggaagaaaggaacgggaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaggaagtagcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagattagacaaa +gaatcttccgccccacaaagaaacagaggaaggaagaaaggggggtgcttggcttggtcactggttcagaca +tcaggaagaggagaccagatgattttcaaccaaagggcaaactgtgggcagacgacaccagaagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcgagaatagtcccattaggaaccggctggg +gcttttgggtctcat-ccaacctcctgatcacaacaacacatgtcctgcctaaggggcttaaggaacttttt +ggggttgaaatcaaacagatccaaattcacaagtctggagagttttgcaggttcagattcccaagaccaatc +aggccagatgtcacagggctcgtgctggaggaaggtgctccagaaggcactgtctgttccatactcgtaaag +agacctacaggtgagatgatccctctggcagtgaggatgggcacgcatgcatccatgaagatacagggcagg +accgttggtggccaaatgggaatgctcctcacgggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggctgcccttacatctacaaacgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacaccgtcatatgtgccactcaagggcaagatggggaggcagttcttgagggaaatgag +aaccttggcacttactgtggtgccccaattttgggtccgggcaaggcgcccaaactcagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacctaggaggcaaggacccc +agagtggaaaaaggaccatccctgcagcaagtcatgagggatcagttaaaaccttttacagaacccagaggc +aaaccacctagacctgcaatcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccatcgac +cctgccaagccatggacctattcccaagcatgtgcctcactggacaagaccacttctagtggtagcccccac +catgtcaagaagaatgaccattggaatggagaatccttcactggcccccttgcagaccaagcatccaaagcc +aatctcatgtatgagcaggccaaacatgtgcagcccgtgtacacggccgctctcaaagacgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcttatgggggtcggatcttggcacgatgatcaggtgc +gccagggcctttggcggtctcatggatagcatgaaggcaagctgtatagccctcccatgtagagtaggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacagatatcactatgatgctgactat +t-ccaggtgggattcaacccagcaaaggagcattctcacggccgctatggaagtgatgg-tgcggttttctg +ccgaaccagaact-ggcacaagtggtcgcagaggaccttctggcacccagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcaggggtcccatgcacatcacagtggaattcaatagcacattgg +atcctaaccctgagtgcaatggcagaagtgtcaggtctatcaccagatgttgtccaagcccactcctgtttc +tcattttacggcgacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggaatatggtctggtccccacccggcctgacaaaactgaaggacccctcgtaataactgaagacctcacc +ggcctaacgtttcttcgtaggtcgattgcacgagacccagctgggtggtttggaaaattagaccaggactca +atcctcaggcagttatactggacaagaggccccaatcatgagaatccatatgagagcatggtccctcactcc +caacgggccacacaactcatggcccttctcggtgaggcttcactgcatggcccccaattctacaagaaagtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattttatgtgcccagacaagaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---cgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcggctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtctcaccgagaaactcgcctgg +tgagatgctattaaatcttgaattaggcccagaactcaacccttacctaagccatttgtcccgcatgtataa +cgggtatgctggtggcatgcaggttcaggtggtcctggctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtgccaccacattttcccgtagaaaacatcaatgcagcccaaataaccatgtgtccccatgt +aattgttgatgtgagacaacttgaaccagtgcttttacccctccctgatataaggaacaggttctttcatta +caatcaagaggatacc---ccccggatgaggcttgtggcaatgctttacactcccctgagggc---taattc +tggtgaagatgtttttactgtctcttgtagggttttaacccgtcctgcccctgattttgaattcactttctt +ggtgccaccaaccgttgaatcaaagactaaaccttttacactacctatattaactcttggtgagctatccaa +ctctaga---ttcccagccccgatagacatgttgtacactgacccaaatgaggggattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctacaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcatactgattggccag--------- +----------acatcaaggtctccagactc----------------------------agactcaactg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatatgcaattagagaatcttgatggcacgcagtatgatccaactgatgaagtgccagc +agcccttggtgccgttgacttcaaggggaccatttttggagtggccagtcaga---gagacacgtcagggag +-----tc---aagtgggg---------gcaacc--------cga-----------gctcatgaggtgatcat +caacactaccgatcctaggtatacaccaaaactgggatccgtcctcat---gt---------attcagagtc +gcaagactt---tgagactggacagccgatcc---------------------------gcttcacaccta- +--------taggaatgggtgaga---------------------acgactggcaccagtgggagctgcctaa +ctactctggacgc-ctgacc------ctgaacatgaaccttgccccagctgttgctcctgcttttcccggtg +agaggattcttttcttcaggtcaatagtcccat------ctgctggtggcta------cgggt--------- +--ctggacagatggactgcctcttaccacaggagtggattcagcatttctaccaggaagctgcaccgtccca +atctgccgtggcactcattaggtatgtcaaccctgacacaggcagaaacatttttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggcaataaccctattgttgtccctcctaatggatatttcagatt +tgaagcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgcagg---------ag +gaatc---------aataatggccagtgcttttcttgcaggtcttgctggcgacgccataacaaatggcgtt +ggatctttaataaatgctgg---agctaatgcaattaatcagaaagttgaatttgattttaatagacag--- +------------------------------cttcaattggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgtcagcaaccaagcagttgcagcaggagatgatgaacataaaacagggggcgctgaccgctggc +ggcttctcccccacggatgctgctagaggggccgttaacgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaacagcatgaaaactacaagctactcagg-acagttctctagcagccctgttca +ta-----------ggtcccctgctccttcccagcttgttgcctc---------------------------a +tcaa-------------------agggtaaattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattctg-----------ctagtgtgcatagctcttcttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtcat-------cagg--------aa +ctagatc----a---tccag-------------------gtccaccaccacat---------ccacagcaac +ccccac-------------------ctt--------------gtccaggaccagcgactgggttaggggaca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaactgcctttgtcacacctccgtcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggact------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198550.1/1-7434 |Norovirus Hu/GII/10078/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttctggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcctttagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacttaataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgatagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaga +ttagaaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaagacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaagtcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagacttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaat---------ttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198551.1/1-7443 |Norovirus Hu/GII/20108/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198552.1/1-7414 |Norovirus Hu/GII/20154/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggcgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatctatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagtcgacagaatccagagcacctccgtacagaccaacaacgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcactacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgatttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggatcagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacatct-ggctcaggtggtcgcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctataaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgcggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcgtaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aagtca---cagtctcaaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198554.1/1-7421 |Norovirus Hu/GII/C2H-48/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcctttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaacgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcctcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccaggt----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggtcag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcggtcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggcgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198555.1/1-7431 |Norovirus Hu/GII/C2035/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------cctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagatactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatatagtagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatggactagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ctactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaattagatactatgtcaagtgtgtccaggaggccctgtactccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacaacatcaaaactgagggtaagaaagggaagaata +agactggccgcggcaagaagcacacagcattctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggataaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcgcctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggatctgggcactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggaatgccccagcacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcctccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtactcatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccagccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagtcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacctgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaagttggaacagttacgatccaacagaagaaatcccagc +ccctctaggatctccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggttctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagagatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaaattttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198556.1/1-7443 |Norovirus Hu/GII/10127/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacaccctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggacgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctagcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcacactttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198558.1/1-7443 |Norovirus Hu/GII/30257/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaacctct +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaagttaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtacttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccgaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctcac-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtaaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttatccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaagaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttgctccaaaactgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgttcgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccctaatggctattttaggtt +tgattcttgggtcaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaattcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctgggctggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198560.1/1-7443 |Norovirus Hu/GII/C2H-50/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtccgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagaacacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgttgact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagataaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcgggaaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaacgat---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaaccaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgtccaaccaca +aaatggtaggtgcacgaccgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaaccaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggccttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactgttgctt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198561.1/1-7425 |Norovirus Hu/GII/30303/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198562.1/1-7443 |Norovirus Hu/GII/C2H-55/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaattggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggggaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcccaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttagtggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgagatgcgccagaatcagatactatgttaagtgtgtccaggaggccctgtattctatcatcc +aaattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaaaccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaca-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaagctcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagttcacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcgctcaaggatgagttggtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtataggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatacgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgttcaaccaca +aaatggtaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgcg----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccacaaagcaacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggtaccacccaccgaaatgaaccccagcaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagtgggta------tccta--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccagaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttttctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaagttttggattggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------aacctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggcctcttct------------------gg +tacatcct-----------ctaat------------gcttctactgttaatt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------gc +ttggttc--------tacagctggctctgtcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcgcctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198563.1/1-7277 |Norovirus Hu/GII/C2365/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gggtattttctaatat +gactgtcacttttaaacgag----ccctcggggcgcggtctaaacagccg-cccccgaaggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggactgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagctatcagccttgctaagattgagctgacccccttgtctttatattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcatcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattacgagctgcaggggcccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaaattggt +catgaagtggtttttcccaaagaaagaagagaagaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgtaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaacgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccgggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatttggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctacgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgatttctcacacataaaactga +cattagccccgcaaggaggttttgataagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaataacaccagtgtgcaaaccaacaacgagctctccggggcct +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctatactccatcttgc +aaattgctggggctgcattcattactacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagcaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgacgaggagtacgaagaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggtcacaggttctgaga +tcaggaagagaaacccggatgacttcaagcccaaagggaaactgtgggccgatgatgataggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ctagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccataaaacaaatacaaattcacaagtcaggcgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggagctcatgcccttggcagccagaatgggcacccacgcaaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttgctcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagaggggaaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattaggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccactacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactgtaatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtatgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaataatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggttaatggacgaactcaaggcccattgcatcacactaccagtcagggttggtatg +aacatgaacgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaagttacagacctgtcccctgacatcatccaggcacattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaaaccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaactggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccctttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgctgcatggcccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcaccggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttaggcagctggaaccagtcaacctcccgatgcctgacgttcgcaacaactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgtagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattttgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagtaacccctagattattta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tgatgattt---ttatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagactttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacctagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaaaaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgcttacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaagttgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccgtgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcaca-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacacccagcagtgggtcttcagtgaggtca +aattcaacccagatcac--taacctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactag------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198564.1/1-7399 |Norovirus Hu/GII/C2H-44/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------------------------------------------------------------------cagc +a------ac----aacgacaccgcaacatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgctgctgggtcctggatctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggcttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctaagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcgtcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgcgtaggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcctttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttccctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtaactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgctccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggagcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-cccgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagagctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtccttacgaggccatcccctgactttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttattgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggggtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgactcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgcggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctct------------------ag +tacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198565.1/1-7443 |Norovirus Hu/GII/10169/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198566.1/1-7443 |Norovirus Hu/GII/20093/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactggacccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198567.1/1-7443 |Norovirus Hu/GII/10255/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttctaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggagttggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgccgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagttaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgctccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaggggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccacccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgccgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttcccggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gtttctactgccactt-------------------- +----------ctatat-----attcaaatca------aactttttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198568.1/1-7304 |Norovirus Hu/GII/C2H-62/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------------------------tgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggcctttagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtccgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaaaggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaagtggaaaacatagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgttgact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagataaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccgtcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaactgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcgggaaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaacgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaaccaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagctgttcacgggccccagcggtgcctttattgtccaaccaca +aaatggtagatgcacgaccgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggggtgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaaccaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgataccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactgttgctt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctt---------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198569.1/1-7414 |Norovirus Hu/GII/10235/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaagtagctaacatattcctgtgcgccctgtcctcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtagctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcaccaagcgtgcga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgccggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtacacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198570.1/1-7443 |Norovirus Hu/GII/20146/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggcctttagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaactattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtatctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctgttcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacgtcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctaaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ctagcctatttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggggcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaacggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcgtt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198571.1/1-7443 |Norovirus Hu/GII/20123/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198572.1/1-7425 |Norovirus Hu/GII/20370/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcatcatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgacgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccactcccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggactcaggaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatacacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gatcc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccatcaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198573.1/1-7421 |Norovirus Hu/GII/C2H-45/2011/VNM nonstructural polyprotein, capsid protein VP1, and capsid protein VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgggggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgctgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgttgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggacaaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgctagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcctttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaacgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcatcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggtaagaaaggaaagaaca +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttagattcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcctcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggctcaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtaacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccaggt----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggtcag-ttcacc------cacaacatgaacttagccccagctgttgcccccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcggtcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctatcaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggcgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctagac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198574.1/1-7431 |Norovirus Hu/GII/10183/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gtcgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttctaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtaccttatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgcgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttggggggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgacgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgctccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aatctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaggatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gtttctactgccactt-------------------- +----------ctatat-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198575.1/1-7443 |Norovirus Hu/GII/20069/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaactcttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacaggaacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttttgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacatcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccgcccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaaactgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198576.1/1-7431 |Norovirus Hu/GII/C2H-43/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gtcgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactagtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcccctcaacatcatcaacatcctagcttcatgtgactg +gactttcgcaggcatcgtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgccgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcaactcgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgcgtccaggaggccctgtattctatcattc +agattgctggagctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaaaacttatggt +ccaagccacaaatggaaaatacagagga--------agccaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatcacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactatgggctgacgatgacagaagtgttgact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagtaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggacgagttggtcaaa +actgataaaatttatggcaagataaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttctcaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggctatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgccttcattgttcaaccaca +aaatggtagatgcacgaccgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagcaacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +accaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcggggccatt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tactcccgctcgggcctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactattactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaagagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198580.1/1-7423 |Norovirus Hu/GII/10223/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------------------------------cgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctacgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgctcaaaacccaaa-- +-gat----gacgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgagggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccgccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtcctcgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgataagaccacttctagcggccacccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaggcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccaactga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttaccccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaactg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgacgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccagaactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198582.1/1-7438 |Norovirus Hu/GII/30192/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-------------ccg---atcttctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagagattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctgggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggcaaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaataat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatctggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctatacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttagactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggatccc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198583.1/1-7425 |Norovirus Hu/GII/20493/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggatggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctttctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacgtgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggtaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctccttcacgagagattagacgaatacgagctgcagggcc +caacccccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tacaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gactagtaatgtggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccctaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatcttcgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaagttaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaactgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaacaattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcgatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcagccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198584.1/1-7431 |Norovirus Hu/GII/10131/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------actaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgtcgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagacggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198585.1/1-7431 |Norovirus Hu/GII/10238/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gtcgcttccgctgccgctgttgct------------cacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgaggacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagatcaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggtccttcgttgcagcaagtcatgagggaccagctcaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacggtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcagttggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198586.1/1-7422 |Norovirus Hu/GII/30400/2010/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccatt +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---tagaaggatgatacagaggacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgctctctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcatagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggaggggtaggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgcaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcgccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggtgaccagagggtgggtcttatcccacgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacgggatgagcaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgtcctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaggcta +aacgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcggggctcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaagt +acggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacaccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcagaagatctggagga--------gac---taatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgatgaatata +aaagaatcagggaagaaagaaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaagaggaaagggcctctcttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcacaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttactcacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctatatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaactcagcaccaaaaccaaa +ttttggagatcttccaccacccccctgccacccggaacctatgagccagcttatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggttatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttac +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaagcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagctagtcaag +actgataagatctatggaacaatcaagaagagactcctgtggggttcagacctatcaaccatgatacggtgt +gcacgagccttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaataccattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactatgtgcactgtctgaggtcacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagcacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggccgggtggtttggcaaattggaccaaagttca +atactcaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagttcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctgactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagccctactgagaacattgttgtccagtgcca +gaatggacgcgtcacccttgatggtgagttgatgggcaccacccaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaattaggctcactagagatttcc------------actgagtc +tggagattt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctatgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtacagcacttctaccaagaatcagccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaaccccgatgtcgggtggctttata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------t-----------ggc--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198587.1/1-7414 |Norovirus Hu/GII/20153/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaatatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgttc---- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198588.1/1-7431 |Norovirus Hu/GII/10037/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgctcccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ttc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgtttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggcgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacacacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtactaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcccggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198589.1/1-7443 |Norovirus Hu/GII/20144/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagagtagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtctcgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctgaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaagtttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatactccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcatag +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctagggccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcggggacgct---------------------------------a +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198590.1/1-7421 |Norovirus Hu/GII/C2H-39/2011/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtattttctaatat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgagggacaaaccacca +aaa---------------------cccccaagaccacccacaccagagttggtt-------aaagcaatccc +ccc-----------------------------tcccccacccaacgg------ggaggacgaaccaatcatt +tcttacaacg----------tcaa---agagggggtttctggtctgcctgaactctcaactgtcacccaacc +ggaagagagctctacagcattcagcgttccccctcttagccagagggagaacagagatgcaaaggaaccact +gactggaaccatcctggagatgtgggacggggagatctaccattatggcttatatgtggaacgagggttagt +gctaggtgtacacaaaccaccagcagccatcagccttgctaaggttgagctgacccccttgtctttgtattg +gagaccagtgtacaccccac---agtacctcatttcccctgacactctcaaaaagttgcatggggagacatt +cccttatacagcctttgataacaactgttatgccttctgctgttgggtacttgacttgaacgattcatggct +gag---cagaaggatgatacagagaacaacaggcttcttccgaccctaccaggactggaacaggaaacccct +ccccacgatggatgactccaaagtgaaaaaggtggccaatgttgtcctctgtgcactctcgtcattgtttac +aagaccaattaaggacattattgggaagttgaaacccctaaacatcctcaacatcctagccacatgtgattg +gacttttgcaggcacagtagaatccctgatccttttggctgaactgttt---ggagttttctggacaccccc +agatgtgtctgcaatgatcgctcccttactgggtgattatgagctgcagggacccgaggacctcgctgtgga +actcgtacccgtagtaatgggagggataggtttggtgctgggattcaccaaagagaaaatcggcaaaatgct +ttcatctgctgcttcaaccctgagggcatgtaaagatctcggtgcatatgggttggagatcctcaagttggt +catgaagtggtttttcccaaagaaagaagagaaaaacgaattggcaatggtgagatccatcgaggatgcagt +gctagatcttgaggccattgagaacaaccacatgacagctctactcaaggataaagacagccttgcaaccta +catgaggactcttgacatggaggaggagaaggcgaggaaactttccaccaagtctgcctcaccggatattgt +gggcacgataaatgccctactgtcaaggattgcagctgcccggtctctagtgcacagggctaaggaggaact +gtcaagcaggccccgaccggtcgttgtgatgatttcagggagaccaggcatagggaaaacccacctagctag +agagctggcaaagaagatcgcctcctcactcacaggcgaccagagggtgggtcttatcccgcgcaacggggt +cgaccactgggatgcatacaaaggtgaaagggtcgttctctgggacgactacggaatgagtaaccctatcca +cgacgccctcagactccaggagctcgctgatacctgccctcttacacttaactgtgacaggattgagaacaa +aggcaaagtctttgacagtgacgccataataataaccaccaatctggccaacccagcgccactggattacgt +caactttgaagcctg-ctcaagacgcatagacttcctcgtctatgctgatgcccctgaagttgagaaagcta +agcgggacttcccaggccaaccagacatgtggaaagacacctttaaacctgacttctcacacataaaactgg +cattagccccgcaaggaggttttgacaagaatggtaacactcctcatgggaagggtgtcatgaagaccctca +ctgccagttccctcgttgcccgagcatcgggactcctccacgagagattagacgaatacgagctgcagggcc +caactcccacaacattcaacttcgaccgcaacaaggtacttgcttttaggcagcttgctgctgaaaacaagt +atggccttgttgacacaatgagggtcggatcacagctcaagaatgtcaaaactatgacagaactcaagcagg +ctcttaagaacatctcagtcaagaaatgtcagcttgtgtatggtgggggcacgtacacactcgaatctgatg +gcaaaggcaatgtgcatgtcgagaaggtgaacaacgccagtgtgcaaactaacaacgagctctccggggctt +tgcaccatctcaggtgtgccagaatcaggtactatgttaagtgtgtccaggaagctctctactccatcttgc +aaattgctggggctgcattcattaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccaaaccacaggcaggagatctggagga--------gactagtaatgaggagggttgtccaaaacctaaa-- +-aat----gatgagg---agtttgtcatctcctctgatgacatcaaaactgagggcaagaaaggaaagaata +agaccggccgtggcaagaagcacacagccttttccagcaaaggactcagtgatgaggagtacgacgaatata +aaagaatcagggaagaaaggaatggcaagtactccatagaggaatacctacaggatagagacaagtac---t +atgaggaggtggccatagccagggcaactgaggaagacttctgtgaagaagaggaggcaaaaatccggcaaa +ggatatttagaccgacaaggaaacaacgcaaagaggaaagggcctcccttggtttggttacaggttctgaga +tcaggaagagaaacccagatgacttcaagcccaaagggaaactgtgggccgatgatgacaggagtgttgact +acaatgagagacttagtttcgaggctccaccaagcatttggtcacgaatagtcaactttggctcagggtggg +gcttttgggtctcgc-ccagcctcttcataacatcaacccatgtcattccccaaggcgcgcaggagttcttt +ggagtgcccatcaaacaaatacaaattcacaagtcaggtgagttctgccggcttaggttcccaaaaccaatc +aggacagatgtcacaggcatgatcctggaggaaggtgctccagaaggcactgttgccacacttctcatcaag +agaccaactggggaactcatgcccttggcagccagaatgggcacccacgcgaccatgaaaattcagggtcgc +actgttggtggacagatgggcatgttacttacagggtctaacgctaagagtatggacctgggtacaactcct +ggcgattgtggttgtccctacatctacaagagggggaacgactacgtggtcattggggttcacactgccgcc +gctcgtggaggaaacaccgtcatctgtgcaactcaaggaaacgagggtgaggccatgttagaaggtggtgac +aacaagggaacttactgtggagcaccaatattgggccctggaaatgcccccaaaatcagcaccaaaaccaaa +ttttggagatcttctaccacccccctgccacccggaacctatgagccagcctatctgggtggcaaggaccct +agagtgaaaggtggcccctcactgcaacaggtcatgagggaccaactaaaaccattcactgagcccagaggc +aaaccacccaaaccaagtgtgctagaagccgccaagaagactataatcaatgtgcttgaacaaacaatagac +ccacctcagaaatggacatacgcacaggcgtgtgcatcactagacaagaccacttccagcggccacccttat +cacatgcggaagaacgattgctggaatggggagactttcacaggaaaactggcagaccaggcatcaaaggct +aacctaatgtttgaggaaggaaagaacatgaccccagtatacacaggagctctgaaagatgagttagtcaag +actgataagatctatggaacaatcaagaagagactcctttggggttcagacctatcgaccatgatacggtgt +gcacgagctttcggtgggctaatggacgaactcaaggcccattgcgtcacactaccagtcagggttggtatg +aacatgaatgaggatggacccataatctttgagaaacattccagatacaaatatcattatgatgcagactac +t-cccgttgggattcaacacaacaaagagcagtgttggctgcagccctggaaataatgg-tcaaattctcac +cagaaccccatct-ggcccaagtggttgcagaagacctcttatcccccagtgtgatggatgtgggtgacttc +aagatatcaatcaacgaggggttaccctctggtgttccctgcacctcacaatggaactccattgcccactgg +ctcctcacactgtgtgcactgtctgaggttacagacctgtctcctgacatcatccaggcaaattccctgttc +tccttttatggtgatgatgaaatagtgagtacagatatcaaactggacccagaaaaattaacaacaaaattg +aaggaatacgggctaaagccaacccgtcctgacaaaacagaaggacccttaatcatctctgaagatttggat +ggcctgaccttcttacggagaacggtgacccgtgatccggctgggtggtttggcaaattggaccaaagttca +atacttaggcagatgtactggaccaggggaccaaaccatgaggaccccttcgaaacaatgataccacactcc +caaagacccatacaactgatgtcattattgggtgaagctgcgttgcatggtccatcattctacagtaaaatc +agcaaattggtcatctcagaattgaaagagggtggaatggatttttacgtgcccagacaagaaccaatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacagtga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgaattcacagtatcccctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctacttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtgcaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagccattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgcccacatgt +gattgtggatgttagacagctggaaccagtcaacctcccgatgcctgacgttcgcaataactttttccatta +caatcaggggtctgat---tcgagattgcgcctaattgcaatgctgtatacacctcttagggcaaataactc +tggggatgatgttttcactgtgtcttgcagagtgctaactagacctagtcctgacttctcatttaatttcct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccccattctaactatctctgaaatgtccaa +ttctagg---ttcccagtaccaattgattctctgcacaccagtcctactgagaacattgttgtccagtgcca +gaacggacgcgtcacccttgatggtgagttgatgggcaccactcaacttttacctagccaaatctgtgcttt +caggg-----------------------------------------gcatgctaaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgatgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcactccaaaattaggctcactagagatttcc------------actgaatc +tggagattt---tgatcaaagccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgaggcagattttcaacaatggactcttcccga +ctacgctggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccccggtg +agcagctccttttctttcgctcacagttgccat------cttctggcgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcacttctatcaagaatcggccccctccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagctgcacaa +attaggtttcatgactatagccaagagtggtgactctccaataactgtccccccaaatggatacttcaggtt +tgaatcttgggtgaaccccttttatacgcttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggtgttgaccgctggc +ggcttctcccccactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcgccaggtgccacctccacaacctcaatgtcgggtggcttcata-aatca--------- +aa-------------ctgtgcacagatccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccgcacccagcagtgggtcttcagtgaggtca +aattcaacccaaatcac--tagcctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------gt------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttaggacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggac-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KM198591.1/1-7431 |Norovirus Hu/GII/20122/2009/VNM nonstructural polyprotein and capsid protein VP1 genes, complete cds; and capsid protein VP2 gene, partial cds +-----------------------tctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgccgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcaggtacacaagtcgggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagtcggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggc---------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ710245.2/1-7570 |Norovirus GII strain GII/Hu/ZAF/2011/GII.P4_GII.4/CapeTown/6745, partial genome +----gtgaatgaagat---ggcggctaac-gacgcttccgctgccgctgttgct------------aacggc +a------ac----aacgacatcgcaaaatcttcaagtgacc---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagcct-cccccgagggaaataccacaa +aag---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccgggttgcccgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactccatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggccttgt +actgggtgtacacaaaccgccagctgccatcagcctcgctaggattgagctatcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacaccctcaagaagttacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccctttgttgttgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataataggtaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagagctcttt---ggagtgttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcgaccactttgagggcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaacgaactggctatagtgagatctatcgaggacgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcaggccaagaccagtagtattgatgatatcgggcagaccaggaatagggaagacccacctcgctag +agaagtggccaagagaatcgcgtcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagtaaccctgttca +tgatgccctcaggttgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgagaacaa +aggaaaagtctttgatagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaagtcaa +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacatgaaactaa +cattggccccacagggtggcttcgacaagaacggaaacaccccacacggcaagggcgtcatgaagtctctca +ccactggctcccttattgcccgggcatcaggactactccatgagaggttagatgaatttgaactacagggcc +caaccctcaccaccttcaattttgatcgcaataaagtacttgcctttagacaacttgctgctgagaacaaat +atgggttgatggacacaatgagggttgggagacagctcaaggatgtcagaaccatgacagaactcaaacaag +cactcaagaatatcgcaatcaagaagtgccagatagtgtatagtggttacacctacatacttgagtctgatg +gtaagggcgatgtgaaagttgacaaaattcagaacacctccgtgcagaccaacaatgagctgactggtgctc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgttcaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaaaccacaagtggaagacacagagga--------gaccaccagcaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggattagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtgaccattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttcgctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcactacacca +ggtgattgtggctgtccctacatctacaagagaggcaatgactatgtagtcattggagtccacacagccgcc +gctcgtggaggaaacactgtcatatgtgccacccaggggagtgaaggagaggctgtgcttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggaatgccccaacacttagcaccaagaccaaa +ttttggagatcgtccacggcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagagtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggacatttgcacaagcttgcgcgtcccttgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagaacttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaaggaaagaacatgaccccagtctatacagctgcgctcaaggatgagctagttaaa +actgataaaatttatagcaagatcaagaagaggcttctctggggttcggacttggcgaccatggtccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aacatgaacgaggatggccccatcatcttcgagaaacattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctctc +cagaaccacgctt-ggctcaggtagttgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacttgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctt +agggaatatggattgaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaggacttggat +ggcctaaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggacaaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctattgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacgatga +ggttatggctttggagcccgttgttggtgccgcccttgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaatgcgttcaccgc---cggaaaggtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgctaggaataatttctaccacta +caatcaatcaaatgaa---tccaccatcaaattgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatccctcgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaagattgttcacgggtcccagcagtgcctttgccgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ccacagg------------------------------------------------ta---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaatcggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagacttcgtggggaagattcaaggtgcgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttactccaaaactgggtagagttcaatttgcca---------ctgatacaga +ccatgattt---tgatactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggttctactacccaccggaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtggcccccacttttccgggtg +aacagcttctcttctttaggtccactatgcccg------gatgtagtgggta------cccca--------- +--acatggatttggactgcctgctcccccaagaatgggtggcgcacttctaccaagaggcagcccccgcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggcagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagatatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcgct---------------------------------g +ccaggga----------------gagctaatctcagggctgc------------------------------ +------------------------------tgtccccgctcggggtccctcc------------------ag +cacatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccgtgaactgggttagggatca +aaacaggagtttgtcacctttcatga---ggggggcccacaacacatcgtttgtcaccccaccgtctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcacgcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttgaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KJ649705.1/1-7564 |Norovirus GII/Hu/HKG/2013/GII.4/CUHK-NS-141, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaatgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggagtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaatgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaaggatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaatcccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtatacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggtcgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagcgaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgcttatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaagttggcagatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggacgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggttccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +tcatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aacact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaagttg +cagcaagcatccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctt +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tatttt +c-ttt--a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KF895841.2/1-7551 |Norovirus GII isolate Hu/GII.P16-GII.3/Smolensk/S12-31/2012/RUS, complete genome +-----tgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagcct-gtcccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggt---gaagaagaagaaccagtcatt +aggtatgagg----------ttaa---gagtgggatctctggcctgcccgagctcacaacagtcccccaacc +ggacgtggccaacacggcattcagtgttccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggagaagggcttagt +gttgggtgtgcacaaaccacctgcagccataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---agtacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaattgctatgccttttgctgttgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcaggccttaccaagagtggaacagaaaacccct +gcctactatggatgattccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacccataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctttgatattactcgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgattgctcccttacttggagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataaccacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaacccttgacatggaggaggaaaaagccagaagattgtccacaaaatctgcatcccctgacatagt +tgggacgatcaacgccctgctggctcgaatagcagcggctaggtcactagtccacagggccaaggaggagtt +atctagcaggatgagaccagtagttgttatgatatctggcaaaccagggataggcaaaactcatttggccag +ggaggtggcaagaaaggtggcatccactctcacaggggatcaaagagtcgggctcataccgagaaatggtgt +ggaccactgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagcaaccccattca +tgatgctctgcgcatacaagaattggctgatacgtgtccccttaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgaggcaccagaagtagaaaaagcaa +aacgagactttcctggtcaaccagatatgtggaaggacgccttcaagtcggacttttcacatatcaggttgc +aactcgcacctcagggcggctttgacaagaatggcaacaccccacatgggaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggatgaatttgaactccaaggcc +ccacagtcaccaccttcaatttcgaccggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtagacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaaaaatgtggtcatcaagaggtgccagatcatctacggtggctccacgtatgaccttgagtctgatg +gcaagggcaaagttttggtggaaaaggtcaggaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtctactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagatttctgtgaggaggaggaggtcaaaatccgtcaga +ggattttccgtcccaccaggaaacaaagaaaggaagagaggaccacactagggctagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggctggg +gcttctgggtatcgc-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggggtccccatcaaacaaatccaggtccacaaatcaggtgaattttgtcggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgattttggaggaaggcgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcaaccatgaaaattcaaggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggggtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccctggaggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgtgacccg +cgtgtcaagggtgggccctccttgcagcaggtaatgagagaccagttgaagccattcactgagcccaggggt +aaacctccaagaccaagtgtgttggaggcagccaaacaaaccatcatcaatgtcctcgaacaaaccctggac +cctccacaaaaatggacatacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccccac +cacgtccgaaagaatgaattctggaatggtgagaccttcacaggtaaattggcagaccaagcatcaaaagca +aatctaatgtttgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagctggtcaag +actgacaaagtctatggtaagatcaagaagagactgctctggggttctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggctcactgcatatcactcccagtccgagttggcatg +aacatgaatgaagatggcccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtattagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgttggcccccagtgtggtggatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaagctgtcccctgacattgtacaggcaaattctatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttaaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcactttcctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagaggaccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacgggccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtaccagagatcagtaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcaccccttactggccagcaaaacataataga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacccaggaactcccctgg +tgaaatacttctaaatttagaattaggcccagaaataaatccctatctggcgcatcttgctaggatgtacaa +tggttatgcaggtgggtttgaggtgcaggtggtcctggctggaaatgcgtttacagc---aggaaaagtgat +ctttgcagctataccccccaatttcccaactgacaatttgagtgcagcgcagattacaatgtgccctcatgt +aattgtggatgtcaggcagttggaaccaatcaacctcccgatgcctgatgtccgcaacaatttctttcatta +caatcaaggttctgat---tcaaggttacgcttaattgcaatgttgtacacaccccttagggcaaataattc +tggagatgatgttttcactgtgtcatgtagggtattgactaggcccagtcctgatttctcattcaacttcct +cgtcccgcccactgtggaatcaaagacaaaaccttttaccctcccaattttgactatctctgagatgtctaa +ttctaga---tttccagtgccaattgactctctgcacaccagtccaactgataacattgttgtccagtgcca +aaatgggcgcgtcacccttgatggtgagctaatgggcaccacccaactcttgccgagtcagatatgtgcttt +taggggtgtgctcaccagatcaacaagcagggccagtgaccacgctgacacagcaaccccc----------- +-----------aggctct------------------------------------------------t----- +-----------ca----------------------------------attac-------------------- +-------tactggcacatacaactagacaacctaaatgggaccccgtatgatcctgcagaggacataccagc +tcctctggggacaccagactttcggggcaaagtctttggcgtggccagccaga---gaaaccctg------- +----------------------acagcacaaca--------agg-----------gcacatgaggcaaaagt +ggacacaacatctggccgcttcaccccaaaattaggctccctagaaatgtcca---------ct---gaatc +tgatgactt---tgatcaaaatcaaccaacaa---------------------------gattcaccccagt +tgg---cattggagtt---------gacaatgaggcagac---------tttcaacaatggaccttacctga +ctattccggtcag-ttcacc------cacaacatgaatctggccccagctgtcgctcccaattttcccggtg +aacagcttcttttcttccgctcacagctgcca------tcctctggcgggcg------gtcca--------- +--atggtattctagactgcctggtcccccaggaatgggtccaacatttctatcaggaatccgcccctgccca +gacgcaggtggctctggtcaggtatgtcaatcctgatactggtagggtgttatttgaggctaagctgcataa +gctaggctacatgaccatagctaagagtggtgattctccaataactgtacccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttacacactagcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaaatactgta +gggtctttagttaatgcagg---ggctggtgctattaatcaaaaagttgattttgaaaataataaatatcta +caaaatg---------------------------------catcctttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggtttctcccccactgatgcagcccgtggggctattaacgcccccataacaaaagttctggactggagtgga +accaggtactgggcaccaaatgccacctccacaacttcaatgtcaggtggctttacaggtcaa--------- +gc---------------------tgtacacagagct---------acaccaaattttaaaaccaatcaa--- +gccccaa----------------aatccacacccagca--------------gtgg---------------- +------------------------------gtcttcagtgaggtcaagctca------------------ac +ccaactca-----------ccaac------------ttgagctcacactcatctg----------------- +-------------ggt-----cttctcgatc------cagcggatccac-----------ga---------- +------------------------tggtcagctcgttacc-----------at------------------c +ttccag---------------------------------------taggactagagactgggttaaccaaca +gaatttcaatttggaaccacacatgc---ctggatctctcaggacagcttttgttactccaccatctagtac +agcctct---agct------------------------------tagaca---cggtctcaaccgtgcccaa +gagtgttttgga-ctcctggacatctgcgt------------ttaacacgcacagacagccgcttttcgcac +accttcgtaaaaggggggagtcaaa--------tgtttag--t-----------gaaaaga----------- +---t-t-att-ttta-----aa------------tttggtt----------tg-------------taattg +g-atttaaatta-g--a---atcttttaaaaaa--------------------------------------- +------------------------------------------------------------------------ +- +>KJ541743.1/1-7559 |Norovirus Hu/GII.4/SGU-110421/KOR/2011, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgggggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaggtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcacctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaacttcgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcagggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaaggagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcaccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcgccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacgaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggctccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggatcagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgacgaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggacttccctctggggtgccctgcacctcccaatggaactccatcgcacactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaatcatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaatgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcccttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgacgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttacaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KJ685402.1/1-7450 |Norovirus Hu/GII/BG1C0434/2012/BGD, partial genome +------------------------------------------------------------------------ +---------------------cgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggagcaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaagaatgatccagagaacaactggtttcttcaggccctaccaggactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagagtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaattagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgtgg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggttacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatttacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagttgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcgtctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaggaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaggctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtacccaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685403.1/1-7509 |Norovirus Hu/GII/BG1C0204/2011/BGD, complete genome +--------atgatgat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgccaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaactgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggacgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggcgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattggtggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatggtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgcct +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagtaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtttccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgctgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgacgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttacca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacga---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaacgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcgctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggggccttctttgccgggttggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctagtcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcgac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcat +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685405.1/1-7509 |Norovirus Hu/GII/BG1C0282/2011/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagtct-cccccgagggaaaaaccacag +aga---------------------cccccacgaccacccactccagaactggtt-------aaaaatatgcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggggaaatttaccattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacagaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gaggcctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattatctggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccaaagaacaactggtttcttcaggccctaccaggactggaataggaaacccct +ccccactatggatgactctaaaataaagaaggtagctaacatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcctgtaaagaccttggtgcatatgggctggagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggccatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgatctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcatacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggcttcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +agggaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaaactag +cactggccccgcagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtacttgcctttaggcagcttgctgctgaaaataagt +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtacagtggttgcacctattcacttgaatctgatg +gcaagggcaatgtgagagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaaacacacagcattctcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agagaattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagggcctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaaggggaaattgtgggctgacgatgacaggagcgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtagtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgctcctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgcgccacccagggaagtgaaggagaggctacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccaggtagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcttatcttggtggcaaggatcct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggacgagttagttaaa +actgataaaatttatggtaagatcaagaagaggctcctctggggctcggacctggcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaattcaaagcacactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtatacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaagtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaagttgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaatcatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggcggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtggttggtgccgcaattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcagacaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttagaaataatttctaccatta +caaccaaacaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccggttttgactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggagaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgatacaga +caatgattt---tgaaactaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttttaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagatacaggtagggtcctgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctatacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaaggttgaatttgaaaacaacagaaaactg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagtaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggttac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaagtca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctccctt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttatcacctttcatga---ggggggcccacaacatctcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685406.1/1-7445 |Norovirus Hu/GII/BG1C0391/2012/BGD, partial genome +------------------------------------------------------------------------ +--------------------------aatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcactactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcatcgacttccttgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaggacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagagtcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaagaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgagaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +catatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgcgcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcactgg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtgg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggtaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagccaaccttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttttactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggctctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatgtgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggtgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685408.1/1-7509 |Norovirus Hu/GII/BG1C0066/2011/BGD, complete genome +--------atgaagat---ggcgtctatc-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-tccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatgcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaatcctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgaactagcaccactctccttgtactg +gaggcctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtggctaacatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcctgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggcttcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtacttgcctttaggcagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagcttaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtacagtggctgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggagaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagacgacttcaaacccaaggggaaattgtgggctgacgatgacaggagcgtggact +acaacgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagagggcgcacctgagggcaccgtagtcacactactcatcaaa +aggtccaccggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgattatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcttatcttggtggcaaggaccct +agagtcaagggtggcccttctctgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgataaaatttatggtaatatcaagaagaggctcctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaagttctccc +cagaaccacattt-ggctcaagtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaaccgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactaggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtggttggtgccgcaattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcagacaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttagaaataatttctaccatta +caatcaaacaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggccaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacaagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccggttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggagaaattattcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggcagagttcaatttgcca---------ctgatacaga +caatgattt---tgaaactaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtaccacccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggcaga-gacact------cacaatgtgcacctggcccccgctgtagctcccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttttaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagatacaggtagggtcttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaactg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagtaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +tcaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +tacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttatcacctttcatga---ggggggcccacaacatctcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685409.1/1-7450 |Norovirus Hu/GII/BG1C0241-32/2011/BGD, partial genome +------------------------------------------------------------------------ +---------------------cgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgccaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaactgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggcgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattggtggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgcct +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagtaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtttccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgctgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgacgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacga---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaacgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcgctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggggccttctttgccggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctagtcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcgac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcat +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685411.1/1-7442 |Norovirus Hu/GII/BG1C0398/2012/BGD, partial genome +------------------------------------------------------------------------ +-----------------------------cttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aagaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---aaatggtgtttccggcttgcctgacctttctaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagagacgtt +cccctacacagcctttgataacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---tagaagaatgatccagagaacaactggtttcttcaggccctatcaggactggaataggaaacccct +tcctactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgccctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttagcctcatgtgattg +gacctttgcgggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggtacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctgtgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgataagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttggatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacttacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtatgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagttaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcacttccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccccagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaaactc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgccatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caaccaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacaagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagactttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatcattccaatttagcagcaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatcct-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685412.1/1-7509 |Norovirus Hu/GII/BG1C0405/2012/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctacagcg----------ccaa---agatggcgtttccggactgcctgagctcactactgtcagacaacc +ggaagaaaccaacacggcgtttagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagagatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagctatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaagcccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaacgaactggctatggtgagatccattgaggatgcagt +gttagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatataagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgacgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaaggacgctttcagtcctgacttctcacacataaaattgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ctactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------acatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------ggtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaagaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaatagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggactgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgagaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaatactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatataggtatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtcttccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaactgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcactgg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcacaa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttttactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggctctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagcaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685413.1/1-7509 |Norovirus Hu/GII/BG1C0317/2011/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgacg---------------gagtgctttctagcat +ggctgttacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacag +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagacgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcataaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagatactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcgaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccatctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagagtcgtcctatgggacgattatggaatgagcaaccctattca +tgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgatttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgctc +tgcaccacttgaggtgcgccagagtcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggagctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacttatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggatgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatttacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaatactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatggtccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactcggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccacccaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcatccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagctccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatctcagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccaccttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685414.1/1-7509 |Norovirus Hu/GII/BG1C0004/2010/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgctaccgctgccgctgttgct------------aacaac +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccacttaatcagagggagaatagagatgctaaggagccact +aactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagccttgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggacagtctggcaaccta +tatgagaacacttgaccttgaagaggagaaagccagaaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggatacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cgctcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcattc +aaattgctggggctgcatttgttaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gacaaccagcaaggacgggtgcccaagacctaag-- +-gat----gatgagg---agtttgtcgtttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaagggaaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggagggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaataattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catgtgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaagatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagttgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggccttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaactggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggaccaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---ggggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaagtgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaga------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggattaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685415.1/1-7509 |Norovirus Hu/GII/BG1C0241-33/2011/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgccaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaactgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggcgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattggtggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgcct +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagtaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtttccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgctgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgacgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacga---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaacgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcgctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatctagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggggccttctttgccggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctagtcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +catgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcgac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcat +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ685417.1/1-7509 |Norovirus Hu/GII/BG1C0270/2011/BGD, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacag +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagacgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcataaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagatactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcgaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccatctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagagtcgtcctatgggacgattatggaatgagcaaccctattca +tgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgatttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgctc +tgcaccacttgaggtgcgccagagtcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggagctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggatgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatttacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaatactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatggtccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaagccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccacccaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcatccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaatcaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagctccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +agttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatctcagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccaccttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ194500.1/1-7527 |Norovirus Hu/GII/Amsterdam/1/1995 isolate NV_Amsterdam_1_1995, partial genome +--------------at---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----agcgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcccttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaacaaaacaa +tcacaaaa---------------accaccaagaccaccaacaccggaattggtg-------aaaagaatacc +ccc-----------------------------accaccacccaacgg------cgaggatgaaccaacggtg +atatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacacacagaacacagcttatagtgtacccccacttagccaaagagaggtcggcgaagctaaagaaccgct +acctggatccattctggaaatgtgggatggtgagatctaccactatgggctgtacgttgagcgagggcacat +acttggggtgcacaaaccacctgctgcaataagcctcgccaaaattgaactgtcaccactgtctctctactg +gagagtggtttacactcctc---agtacttgatagccccagacactctgaagggcttgaatggagaatcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcaaaggacaaccggcttcttcaggccgtaccaggattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcgaatgctgttctgtgtgttctctcctcactcttcac +tagacccattaaggacattattggaaagctcagaccaatgaacatcctcaatatattggcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaactttgt---ggggtgttctggacaccccc +agacgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggcccagaagatctggccgtgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggaaaagatcggcaagatgct +ttcatcagctgcatccacgcttagggcctgcaaagatctaggagcctatggactggagatactcaaattggt +tatgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaggcaatagaaaacaaccacatgaccactctcctcaaggacaaagacagtctggctacata +catgaggactcttgacctggaggaagagaaagcaagaaaactgtccaccaagtccgcatcacctgacattgt +gggcacagtaaatgcattactggcaaggattgcagccgctaggtcactagtccacaaggctaaggaggagct +ctcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaaattgcatcaaccctgtcgggcgaccaaaggattggacttgtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggtactatgggatgactatggcatgagcaaccccataca +ggatgcactgaggcttcaagagctggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtgtttgacagtgatgccataatcataacaaccaaccttgcaaatccagcaccgctggattatgt +caactttgaggcttg-ctccagacgcatagactttttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgacttccccggccaaccagatatgtggaaagatcactacaaaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttccggtttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgaccgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +atggtatggtggacacactgagagtcggtaatcaactgaagagtgtcaagactatggatgagctcaaacagg +ctataaagaatatcaccattaagaagtgccaaatagtgtacaatgggtgtacctacacaatggagtctgatg +gaaggggcaaggttttggttgacaaggtgcaaaacacaacagtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttactac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcgagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgccctaagccccga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagagtcagggaagaaaggaatggcaaatattcaatagaggagtacctccaagacagggacagatac---t +atgaagagctagccattgctagggccactgaagagaacttctgtgaagaggaggagatcaagatccgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagagccacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgataacaggagtgtggact +acaatgagaggatagattttgaagcgccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtcttttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttacggttcccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaagg +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaaacatggacctaggtacaacacca +ggtgactgtgggtgcccctacgtatacaagaggggcaatgactttgtggtcattggcgtgcacactgcagca +gcacgtggaggcaacacagtcatatgtgccacgcaaggaagcgagggtgaagccactcttgagggaggtgac +ggtaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaagttgagtacaaaaacaaaa +ttctggagatcttccaacgcaccgctcccgccaggtacctatgaaccagcatacctaggtgggaaagatcca +cgtgtgaagggcggtccgtctctgcaacaggtcatgagagaccaacttaaatctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +ccccctcagaagtggtcctatgcccaagcttgtgcatcccttgacaaaacaacctccagtggacacccgcac +cacgttcggaagaatgactactggagtggtgagtccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaagcacatgccaccggtttacaccgcagcgctcaaggatgagctggtgaaa +actgacaaaatctatggcaaaattaagaaaaggctcctgtggggttctgacctctctaccatgattcggtgc +gccagagcatttggtggcctcatggatgagctcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-ggcacaaatagtagctgaagacctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccatcaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactttgtgtgccctttctgaagtgacaggactaggccccgacatcatacaagctaattccatgtac +tctttctacggtgatgatgagattgtgagcactgacataaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcagacccacccggcccgacaagaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgccgaacagtcacccgtgacccagcaggttggtttggaaagctggagcaaagttcc +atcctcaggcagctatactggacaaggggacctaaccatgaagaccccagtgaaaccatgataccacatgca +cagagacctgtgcagctcatggcactactgggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcgcctaggaattcccctgg +tgaagtgcttcttagtttggaattaggtccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---agggaagattat +ctttgcagctataccccctaattttcctattgacaatctgagcgcggcacagatcacaatgtgcccgcatgt +gattgtggatgtcaggcagttggaaccagtcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaagttctgag---tcaagattacgtttgattgcaatgttgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcccagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaaccttttaccctccccattttaaccatctctgaaatgtccaa +ttccagg---tttccagttccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcactggat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaaa----------------------------------ctgacacaccaacccccaggcaatt +cgaccgtcgttggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccggggcaaggtctttggcgtggccagccaga---gaaaccccgac----- +------------a------------gagcaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacatctgaccgcttcgccccaaaattgggctc-------cttagaaat-----aaccactgaatc +tggtgactt---tgaagcaaaccagccaacaa---------------------------aattcaccccag- +--------ttggcatcg---gagttgacaatg---------aggcagaatttcagcaatggtccttacccaa +ctattctggtcag-attact------cacaatatgaacttagccccagctgtcgcccccaattttcctggtg +aacagctacttttcttccgatcacagctgccat------cctctggtgggtg------gtcca--------- +--acggggttctagactgcctgctcccccaggaatgggttcaacacttttaccaagaatcagcccccgccca +aacgcaggtggccctggttaggtatgtcaaccctgacactggcagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatattttagatt +tgaatcttgggttaaccccttttacacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgacatgctcacaaacactgtg +gggtctttggttaatgcagg---ggccaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgacaaggagatgttaagt +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccaatgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccgcctccacaacttcaatgtcgggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +ccaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaacttaccaacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacggttg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaaccaaca +aaatctcaatttggaaccatacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ctaaattt- +------gat----ttag---aatc------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ194504.1/1-7535 |Norovirus Hu/GII/Amsterdam/1994 isolate NV_Amsterdam_1994, partial genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgctggcaa---------aaacaac +a------ac----aacgacaaggaaaaatcttcaggtgaca---------------gcttgttttctaacat +gactgtctcctttaagaaag----ccctcggggcgcggcctaaacaaccg-cccccgggagaaataaaacaa +acacaaaa---------------accaccaagaccaccaacaccggaactggtg-------aaaagaatacc +ccc-----------------------------accaccacccaatgg------cgaggatgaaccaaaggtg +gtatacaggg----------tggg---agaaggtgtgtccgggctgcccgacttaacaaccgtggcgcagcc +tgacgcacaaggcacagcttatagtgtacccccacttagccaaagagaggtcggcgaagctaaagaaccgct +acctggatccattctggagatgtgggatggtgagatctaccactatgggctgtacgttgatcgagggcacat +acttggggtgcataaaccacctgctgcagtaagcctcgccaaaattgaactgacaccactgtctctctactg +gagagtggtttacactcccc---agtacttgatagccccagacactctgaagggtttgaatggagagtcatt +cccatacacagcctttgacaacaactgttacgccttctgttgttgggtcttagatctcaatgactcttggct +tag---caggagaatgattcgaaggacaaccggtttcttcagaccgtaccaagattggaatagaaaacccct +gccaaccatggatgagccaaaaatcaagaaggccgcaaatgctattctgtgcgctctctcctcactcttcac +tagacccattaaggacatcattgggaagctcaaaccaatgaacatcctcaatatattggcaacttgtgactg +gacttttgcaggcatagtggagtcccttattcttcttgctgaacttttt---ggggtgttctggacaccccc +agatgtgtctgcgatgattgctcccttactcggtgactacgagatgcaaggcccagaagacctggccatgga +acttgtacccgtggtaatgggagggataggtttggtgttgggattcaccaaggagaagatcggcaagatgct +ttcatcagctgcatccacgcttaaggcctgcaaagatctaggagcctatggattggagatactcaaattggt +catgaagtggttcttccctaagaaggaagaggctaacgagttagccttggtaagggccatcgaggatgcagt +cctggatttagaagcaatagaaaacaaccacatgaccaccctcctcaaggacaaagacagtcttgctacata +catgaggactcttgacctagaggaagagaaagcaagaaaactgtccaccaaatccgcatcacctgacattgt +gggcacaataaatgcattattggcaaggattgcagccgctaggtcattagtccacaaggctaaggaggagct +ctcaagcagacagaggcctgtcgtcgtgatgatatctggcagaccaggcatagggaagacccatctcgccag +agagctagccaagaaaattgcatcaaccctgtcgggtgaccaaaggattggactggtgcctagaaacggtgt +agaccactgggacgcctacaagggggaaagagtggtactatgggatgactatggcatgagcaaccccataca +ggatgcactgaggcttcaagagttggctgatacctgtcctctaactctaaactgtgacagaattgaaaacaa +gggaaaagtatttgacagtgatgtcataatcttaacaaccaacctcgcaaacccagcaccgctggactatgt +caactttgaggcttg-ctccagacgcatagactttttagtgtatgcagatgcacctgacattgagaaagcca +agcgtgactttcccggccaaccagatatgtggaaagatcactacagaccagactttacacacatcaaacttc +agctagcaccacagggaggttttgataagaatggcaacaccccacatggtaaaggtgtagtgaagtctctga +cgcttgggtcattgatcgccagggcttccggtttgcttcacgagagaatggatgaattcgagctccaaggcc +ctaacctaccaaccttcaattttgaccgcaacaagatcgccgcctttaggcaattggcagctgaaaacaaat +atggtatggtggacacactgagggtcggtaatcaactgaagagtgttaagaccatggatgagctcaaacagg +ctataaagaatatcaccattaaaaagtgccaaatagtgtacaatgggtctacctacacaatggagtctgatg +gaagaggcaaggtttcagttgacaaggtgcaaaacgcaacggtccaaactaacaatgagctttcaggagcgc +tgcaccacttaagatctgcaagaataagatattatgttaaatgtttccaggaagctgtctattctttactac +aaattgctggtgcggcttttgtcacctcacgcattgtgaggcgcatga------acatctcgagcctctggt +cgaagccacctgttgaagagagtgatga--------atctgaagacaaagaagggtgccccaagccccga-- +-gat----gaagatg---acctcactatcgattccaaggacattaaagtggaaggaaagaaaggcaagaaca +agtccggccgaggtaagaaacacacagccttctcatctaagggcctcagtgatgaagagtacgatgagtaca +agagaatcagggacgaaaggaatggcaaatattcaatagaggagtacctccaagacagggacagatac---t +atgaagagctagccattgctaaggccactgaagagaacttctgtgaagaggaggagatcaagattcgtcaga +gaatcttccgccccaccaaaaagcagcggaaagaggaaagagccacacttgggctcgtcacagggtcggaga +tcagaaagaggaatccagatgacttcaagccaaaagggaaactgtgggctgatgatagcaggagtgtggact +acaatgagaggatagattttgaagcgccccctagcgtttggtcaaggatagtcaactttggcacaggctggg +gattctgggtttctc-caagtctcttcataacctcgacacacgtgataccaaaaggaatcacggaggcattt +ggggtgcccatgaaccaaatccaaattcataaatcaggggaattctgccgcttgcggttcccaaaaccaatc +aggccagacgtgagtgggatgattttggaagagggtgcccctgaaggaactgttgcgtccatcctcatcaaa +agaacaacaggggagttgatgccccttgcagccagaatgggaacccacgccacaatgaaaatccaaggaaga +acggtgggtggccagatgggcatgttactcacaggttcaaatgccaaaagcatggacctaggcacaacacca +ggtgactgtgggtgcccctacgtatacaagaggggcaatgactttgtggtcattggcgtgcacactgcagca +gcacgtggaggaaacacagtcatatgtgccacgcaaggaagcgaaggtgaagccactcttgagggaggtgac +gacaagggcacctattgtggagcccccattttaggacctggtaatgcaccaaaattgagcacaaaaacaaaa +ttctggagatcatccaacgcaccgctcccaccaggcacctatgaaccagcatacctaggtgggaaagatcca +cgtgtgaagggcggtccgtctctgcaacaggtcatgagagaccaacttaaacctttcacagagcccagaggg +aaaccaccaaacccgagtgtcctagaatcagcaaagaaaactatcatcaatgttctagagcaggtcattgac +cccccccagaagtggtcttatgcccaagcttgtgcatcccttgacaaaacaacctccagtggaaacccgcac +cacgttcggaaaaatgattactggaatggtgaatccttcacaggaaaacttgcagaccaggcttcaaaagca +aatctcatgtatgaagaaggcaaacacatgccaccggtttacaccgcagcgctcaaggatgagctggtgaaa +actgacaaaatctatggcaaaattaagaaaaggctcctgtggggttctgacctctccaccatgattcggtgc +gccagagcatttggtggactcatggatgagctcaaagcaaattgtatcacacttcctgtcagagttggcatg +aacatgaatgaagatggtcccataatatttgagaaacattccagatacagataccactatgatgcagattac +t-cccgctgggactccacgcagcagcgggcagtgttggcagcagcacttgaaatcatgg-tgaggttctctg +ctgaaccacagct-agcacaaatagtggctgaagacctgctagcaccaagtgtggttgatgtgggtgacttc +aagatcaccattaatgaaggcctaccttctggtgtgccttgcacctcacagtggaactccattgcccactgg +ttgcttactttgtgtgccctttctgaggtgacaggattaggccccgacatcatacaagctaattccatgtac +tctttctatggtgatgatgagattgtgagcactgacattaaattggacccagagaaactgactgcaaaactc +aaagagtacggcctcaaacccacccggcccgacaagaccgaagggccgctggtgatcagtgaagacttgaat +ggtttaacgttcctccgtcgaacagtcacccgtgacccagcaggttggtttggaaaactggagcaaagttcc +atcctcaggcagctatactggacaaggggacctaaccatgaagaccccagtgaaaccatgataccacatgcg +cagagacccgtgcagctcatggcactactgggagaatcctccctacatggaccctcattttacagcaaggtc +agcaagctggttatatctgaacttaaggagggaggaatggatttttatgtgcccagacaagagtcaatgttc +aggtggatgaggttctcagatctaagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcgcccctcactggccagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttctcaatttggaattaggcccagaaataaatccctatttggctcatcttgctagaatgtacaa +tggttatgcaggtggatttgaagtgcaagtggtcctagctggaaatgcgtttacagc---aggaaaggttat +ctttgcagctataccccctaatttccctattgacaatctgagcgcggcacagatcacaatgtgtccgcacgt +gattgtggatgtcaggcagttggaaccaatcaatctcccgatgcctgatgtccgcaacaatttctttcatta +taatcaaggttctgat---tcaagattacgtttggttgcaatgctgtatacacctcttagggcaaataattc +tggagatgatgttttcactgtgtcttgtagggtgttaactaggcccagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaagccttttaccctccccattttaaccatctctgaaatgtccaa +ttccagg---tttccagttccaattgactctctgcacaccagcccaactgagaatatagttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggcaccacccaactcttaccgagccaaatatgtgcttt +caggg-----------------------------------------gcacactcactagat----------- +-----------caacaagcagg------gccag---------------------------------tg---- +-------accaag----------------------------------ccgacacaccaacccccaggcaatt +cgaccatcgttggcacatacaattggataatctaaatggaactccctacgaccctgcagaggacataccagc +tcctttgggcacaccagacttccggggtaaggtctttggcgtggccagccaga---gaaaccccgac----- +------------g------------gcacaaca--------agg-----------gcacatgaagcaaaagt +ggacacaacaactaaccgcttcaccccaaaattgggctc-------cttagaaat-----aatcactgaatc +tgaagactt---tgacacaaaccagtcaacaa---------------------------aattcaccccag- +--------ttggcgtcg---gagttgacaatg---------aggaagaattccaacaatggtccttacccaa +ctattctggtcag-tttact------cataatatgaacttagccccagctgtcgcccccaattttcctggtg +aacagctacttttcttccggtcacagctgccat------cctctggtgggtg------gtcta--------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaggaatcagcccccgccca +aacgcaggtggccctggttaggtatgtcaaccctgacactggcagagtgctatttgaggccaagctacacaa +attgggttttatgactatagcaaagaatggtgactccccaataactgtccctccaaatggatactttagatt +tgaatcttgggttaaccccttttatacacttgcccccatgggaactggaaacgggcgtaga---------ag +gattc---------aataatggctggagcttttgtagcaggattggctggtgacatgctcacaaacactgta +gggtctttggttaatgcagg---ggccaatgctattaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcttcttttaatcatgataaggagatgttaagt +gcacaaattgaggcaacaaagaggctgcaggctgacatgattgcaatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcacgtggggcaattaatgccccagtgacaaaagttttagattggagtgga +acaaggtactgggcaccaaacgccgcctccacaacttcaatgtcaggtggcttcacaagccaa--------- +gt--------------tgtgcacagaaccacaccaaat---------------------------------t +tcaaaac----------------gagccaggcccccaaa--------------------------------- +----------------------------------------------ttcacacccagc------------ag +tgggtctt-----------cagtg------------agatcaagctcaacccaactcaccaacttgagct-- +----------cacact-----catc---------------cgggtcgtcccgatctagcgggtctacgattg +tcagctc--------------------------------------gctgccgt------------------c +ctccag---------------------------------------taggactagggactgggtcaaccaaca +aaatctcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagcac +agcctct---agtt------------------------------caggca---cagtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaacacgcgcagacagccgctgtttgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaaga-tt-------- +-------att-c---------------------------------------------------ttaaattt- +------gat----tttg---aa-------------------------------------------------- +------------------------------------------------------------------------ +- +>KJ194507.1/1-6326 |Norovirus Hu/GII/Amsterdam/3/1995 isolate NV_Amsterdam_3_1995, partial genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------------------------------------------------cctgaggacctcgcggtgga +gttggtgccaatagtaatgggggggataggtttggtgttaggattcaccaaagagaagattgggaagatgct +gtcatctgccgcgaccacattgagggcttgtaaagacctcggcgcatatggattggagatcttaaaattagt +catgaagtggttcttcccgaagaaagaggaagtgagcgagttggctatggtgagggccattgaggacgcggt +gctggaccttgaggcaattgaaaacaaccacatgacctctctactcaaggacaaggacagcctggcggttta +tatgagaaccctcgaccttgaggaagagaaggccaggaagctctcaaccaagtctgcctcaccggatatcgt +aggcacgatcaatgctctcctagcgaggatcgcagctgctcgctctctagtccatcgggcaaaggaggagct +ttccagcaggccaaggcccgttgttgtgatgatatccggcaaccccgggatagggaagactcatctcgccag +ggaattagccaagaaaatcgcaggcaccctcacaggggatcagagagtaggtctcatcccgcgcaacggtgt +cgatcactgggacgcatacaagggagagagaatcgtcctttgggatgactacgggatgagcaaccccatcca +tgatgctctcagaatacaagagcttgctgatacctgccctctaacattaaattgtgatagaatagaaaacaa +aggtaaagtgtttgacagtgatgtcataatcatcaccaccaatctagccaacccagcaccactggactatgt +caattttgaggcatg-ttcgaggcgcatcgatttcctcgtgtatgccgaagcccctgatgtcgagaaggcaa +aacgcgacttcccgggccagcctgacatgtggaagaatgctttcagcactgacttctcgcatataaaattga +tgctggccccacagggtggctttgacaaaaacggtaacaccccgcacgggaagggcgtcatgaaaaccctca +ccatcggttccctcatcgctcgtgcttcagggctcctccatgagaggttggatgaatacgagctgcaaggcc +ctaccctcacaaccttcaactttgaccaaaataaggtgcttgctttcaggcagcttgctgcagaaaacaagt +acggcttaatggagacaatgagagttggagggcaacttaagggcgttaagaccatgcctgagctcaaacaag +cactcaagaatatcttaatcaggaggtgtcaaatagtgtacggtggtgtcacttacacgcttgagtctgatg +gtaagggatgcgtgaaggtagacagagtccagagtactactgtgcaaactaacaatgagttggctggtaccc +ttcatcatctcaggtgtgccaggatcagatactatgtcaagtgcttccaggaagccctatattccatactcc +agattgcgggggctgcatttgtcacctcgcgcattgtcaagcgcatga------acatacaggatctctggt +ccaagccacagttggagaacactgaaga--------cactgccagcaaagacgggtgccttaagcctaaa-- +-gat----gacgagg---agttcgtcatttcatctgacgacattaaggctgagggtaagaaagggaagaaca +agactggtcgtggtaagaagcatacagctttctcaagtaaaggtctcagtgatgaggagtacgatgagttca +aaagaatcagggatgaaagaaatggcaagtactcaatagaagagtatctccaagacagagacaagtac---t +atgaggaggttgccattgctagggcgactgaagaagacttctgcgaggaagaagaggccaagatccgccaga +gaatcttcagaccaaccagaaaacaacgcaaggaggagagagcctctctcggcttggtcacaggctccgaaa +tcaggaagagaaacccagatgatttcaagcctaaaggaaaactgtgggccgatgacgacagaagtgtcgatt +acaatgagaagctcagttttgaggcccccccgagcatctggtcgaggatagttaactttggttcgggttggg +gcttttgggtctccc-ctagcctattcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtgcccgtcaaacaaattcaagtccacaaatcaggtgagttttgccgcttgagattcccaaagccaatt +agaactgatgtaacgggcatgatcctggaagaaggtgcccctgaagggaccgtggcctccctactcatcaag +aggccaactggtgagctcatgcccttagcagccaggatgggcacccacgcgaccatgaagatccagggccgc +gtagttggaggccaaatgggcatgctcctaacaggatccaacgccaagaacatggacctaggcaccacaccc +ggtgactgcggctgcccctacatctacaagagagggaatgactatatagtcatcggagtgcacacagctgcc +gcccgagggggaaacaccgttatatgtgccacccaagggagtgaaggtgaagcaatgcttgagggtgctgac +aacaaaggtacctactgtggcgccccaatcttgggtccaggaagtgccccgaaactcagcaccaagaccaaa +ttttggagatcatccacaacaccactcccccctggcacttatgaaccagcctatctcggtggtaaggatccc +agagtcaaaggcggcccctcactgcaacaagttatgagggaccagttgaaacccttcacagaaccgagaggt +aagcaaccaagaccaaatgtgcttgaggccgccaaaagaaccatcattaatgtccttgaacaaacaatagac +ccacctcagaaatggacgttcgctcaagcttgtgcatcccttgataaaaccacctccagtggccatccacac +cacataaggaaaaatgactgctggaacggggactccttcacaggcaagttggcagatcaggcctcaaaagcc +aatttgatgtatgaagaggggaagaacatgaccccagtctacactggcgcccttaaggatgagttggtcaag +actgaaaagatatatggtacaatcaaaaagagacttctttggggctcagacctagcaaccatgatccggtgt +gctcgggcgtttgggggtctaatggaagaacttaaggcccactgtgtcacacttcccatcagagttggcatg +aatatgaatgaggatggacccatcatctttgagagacactccaggtacaaatatcactatgatgcagattac +t-cccgatgggactctacacagcaaagggctatattagctgcagccctagagatcatgg-taaaattttcct +cagagccacactt-ggctcagaaagttgctgaggatctcctttccccaagtgtgatggatgtgggtgatttc +aagatatcaatcaatgaaggccttccttccggggtaccctgtacctcacaatggaactccatcgcccactgg +cttctcactctttgtgcactttctgaagtcacggacctgtctcccgacattattcaggctaactctctgttt +tctttctatggtgatgatgagattgtgagcacagatataaaattggacccagaaaagttgacagcaaaactg +agggagtatggattgaaaccaacccgccccgataagactgagggacctctgatcatttctgaagacctagat +ggcttgacctttctgcggagaaccgtgacccgtgacccagccggttggtttgggaagttagaccagagttca +atactaaggcagatgtactggactaggggccccaaccacgaagacccatctgaaacaatgataccacattct +caaagacccatacaattgatgtccctactaggtgaagccgcactacacggtccagcattttacagcaagatc +agcaaactggtgattgcagagttaaaggaaggtggcatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacgatggcacttgaaccggtggctggggcttccatagctgcccccctaaccggtcaaaacaatgtgataga +cccctggattagaatgaactttgttcaagccccaaatggtgaatttacagtgtctccccgtaattccccagg +tgaagtattgctaaatttggaattaggtcctgaactgaatccattcttggcgcacctttcgagaatgtacaa +tggttatgcaggcggggttgaagtgcaggtgctgcttgctgggaatgcgttcacagc---agggaaactggt +atttgcagcaatccctccgcatttccctcttgagaatttgagtcctggacaaattaccatgttccctcatgt +aattattgatgttagaacactagaacctgttcttttacctctcccagatgttagaaataatttctttcatta +taatcagcaacccgag---ccccgtatgaggcttgtggctatgttgtatactcctcttagatctaatggctc +tggtgatgatgtgttcacagtttcttgtagggtccttacccgcccttctccagattttgatttcaattattt +ggtccccccaactgtggagtctaaaaccaaaccatttaccctgccaatcttgactattggagaattgtcaaa +ttctagg---ttcccagtcccaatagatgaattgtacaccagtcccaatgaaggagtggttgtgcaacctca +aaatggtagatcaacactcgatggtgagttgctgggcactacacaacttgtaccctcaaacatctgtgcgtt +gcgag-----------------------------------------gg------------------------ +---------------------------------------------cgtatcaatgcccaagtgccagat--- +---gaccaccatc----------------------------------aatggaac----------------- +----------------ttgcaggtcacaaatacaaatgggactcccttcgatcccaccgaagacgtccctgc +accattgggcacgccggacttcctggcaaacatttatggagttaccagtcaga---gaaa------------ +-----cc------------ccaacaacacttgc--------cgt-----------gcccacgatggggtctt +ggcaacctggagccctaaatttacacccaaattagggtctgttgttctgggca---------cttgggaaga +aagtgacct---tgaccttaatcaacccacaa---------------------------gattcacacctg- +--------ttggctt------------------gtttaatacagaccacttcgatcagtgggttctacctaa +ctattctggaaga-ctgacc------ttgaatatgaatttggcaccctctgtgtcccccctctttccaggtg +agcaaatactcttctttaggtcccatatacca-------ctcaaggggggcac-----ttctg--------- +--acggtgccattgactgcttgctcccccaagaatggattcagcatttttaccaggaatcagccccgtcgcc +cacggacgtggctctaattaggtacaccaatcctgatacgggtcgagttttgtttgaggctaaattacacag +gcaaggattcatcacagtggcaaattctggctctaggcctattgttgttcctcctaatggctattttagatt +tgattcttgggttaatcagttttattctcttgcccccatgggaactggtaatgggcgcaga---------ag +ggtgc---------agtaatggctggagcttttatagcaggacttgctggtgacatagtcaccaatggtatt +ggatcacttgtgaatgctgg---agcaaacgcaataaaccaaaaagtggactttgaaaacaataaacaa--- +------------------------------ctacaacaggcctcttttaatcatgacaaggaaatgttgcaa +gcccagatccaggccacaaaacagctacaggctgatatgattgcactcagacaaggggtgttgaccgcgggc +ggcttctctcctactgatgcagcaagaggggcggttagtgcacctatgacgcaagtcttggactggaatggg +actaggcattgggcccccggagccacaaaaacaacttctttctccggtgggttcactagctct--------- +tc-------------ccatgctagaactcttgatttgc---------------------------------c +caagaag----------------acaacagctgcaccagccccg---------------------------- +------acgcctgtgtc--tagacccagttctt--ctgcttctacagtttccactcgctcaacaatcattag +cggatctt--------------------------------ctaactttccttcctcga-------------- +----------ttagga-----gcacctctag------tgtttcttc---------------------ccaat +ctacccc--------------------------------------------ct------------------c +ttcctc---------------------------------------ccgggttagtgaatgggtacacaatca +aaatagggcgctggagccttacatga---ggggagcgctacaaacagctta--------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ407072.2/1-7526 |Norovirus Hu/GII.6/HS245/2010/USA, complete genome +----gtgaatgaagat---ggcgtctaat-gacgctaccactgcccttggcagccaa---aactctgtcaat +g------ac----agtatcaacaccgccccttctaataaagaagaggt------tggtgcattctccaacat +caaagttggttttaagaaaa----tactgggtgccgttcccaaggggact-------------aaagcaccc +agtagtga----------------tcagcgctgccccacagttaagatcgggactaaaacattaacagttcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------gccgtg +cagtttgacg----------cgaagtcggaaactgtgcgtgggctaccagacttgacaacggt---gcagaa +tgaacacgaaaacacaccatacactgtccccccattgagcgaaagggagcacagaccagccactgagccgct +tcctggcacaatactggagatgtgggatggtgaattctaccattactccgtgtacgtcagcggtggcaaagc +cctaggggttcacaagccccctgcagcgataagcctcgcgacgatagagctcacacccatatctctttattg +gaggcccgtttacaccccca---actatctggtctgtccagaaacgttgaaaggcctcgctggtgagaagtt +cccctacacggccttcagcaacaactgttacaacttctgttgctgggtgcttgagctcaatgacacgtggct +tag---caggaaaagcatctccaggaccaccggcttcttcaaaccatatcagtcttggaataggagacccct +cccaaccgttgatgatggaaagatcaaaaaggtggccaacgcaattctctgcgcacttggatcactgttttc +aaaaccaatcaaggacctactgggcaaacttaaaccattgaacttgctgcacttgctcgcatcatgtgactg +gacgtttgcgggtatagtagagacagttatcctaatggcggaacttttc---aacatcttttggacaccgcc +agatgtttccagcttcatagcctccctgataggtgactttgaattgcaagggcctgaggacctggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggttctcggctttactgctgagaagataggccgcatgct +gtcgtccgctgcatcaacattgcgggcatgcaaagacttggggaattatgcccttgacatattgaaactggt +tatgaagtggttctttccaaagaaagaagagaaagccgagatggaaaccctaagggcgatcgaggatgccgt +cctggacatggaagctataggaaacaaccatctcacaaccctcctcaaggacaaggatagcctcacggcttt +catgaagactctggatctagaagaggagaaggcaaggaagctgtctaccaagtcatcctcgccagacatcgt +cggcactattaacgccatactggccagaatagctgctgccaggtccctcttacacaaggctaaagaagaaat +gttcagcaggatcagacccgtggttgttatgatctcgggtaggcctggcattggcaaaacccacatggcaag +acacttggctaagagtatcgccaacaccatgagcggcgaccagagagtagggctcgtcccacgcaacggggt +cgatcattgggacgcctataggggagagagggtggtcttatgggatgattatggcatgggaaaccctgtcaa +agatgccctaacactgcaagagttggctgacacctgcccagtaaccctaaactgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacttagtcaacccagcgcccctcgattatgt +aaacttcgaggcgtg-ctccagaagggtcgactttctggtctatgcagagtcaccagaaattgagaaggtta +agagagacttccccggccaacctgacatgtggaaggaccattttaagccagacttttcccacataaaattga +ctctagccccacagggtggatttgacaaaaatggcaataccccgcatggcaagggcaccatgcgatccctaa +cccaggggtccctgactgcaagggttgcaggtcttgttcatgagaggagagacgagtttcagctccagggga +acgaccttcaaacatacaactttgacaccaacagggtctctgcatttaggaagctggccgcagacaacaagt +atgggatcatggagacaatgagagtgggcacggcgcttaagagtgtcaagaccttggaagatctgaaagttg +ccctgagggatgtgaagtttaatgagtgtgagataatttacaggaactccaaataccgagtctcttccaatg +gtaaaggttctgtctctgttgacaaagtcgagggccaaacatcccagactgcaaacgaagtgggtgcagcac +tccttagactcaggcaggcaagagccagatactatgtcagctgcttccaagatctcgtctatactctaatac +aggtcgccggagcatcattcgttgtca---------------acagga------tctctaaaaggttctgct +gggagagatgggtcaaaccaaccgagac-------------ccaggaaacgagtgaatccga-----aaagg +aagtagcccaaggca---gatgggagattgaacccaaggacacagaaccagaaggtaagaagggtaagaaca +agaaaggaagaggcaagaaacacacagctttctccagcaaaggcctgagtgatgaggagtatgacgagttca +agagaatcagagaagaaaggagcggaaaatactccattgaggaatacctgcaagaccgggatcgctac---t +atgaagaagtggcagttgcccgggcgacagaggaggacttctgtgaagaggaggaggccaagataagacaaa +gaatctttcgccccacaaagaaacagaggaaggaagaaagaggggtgcttggtttggtcactggctcagaca +tcaggaagaggagaccagacgatttccaaccgaagggcaatctgtgggcagacgacaccaggagtgtggact +acaacgagagacttgatttcgaggctcccccgagtgtctggtcaagaatagtcccactgggcactggctggg +gcttctgggtctcat-ccaacctcctgatcacaacaacacacgtcctacctaaggggattaaggaacttttt +ggagttgaaatcaaacagattcaaatccataaatctggagagttctgcaggttcaggttcccgagaccaatc +agaccagatgtcacagggctcgtgttggaggaaggtgctccagaaggcactgtctgctccgtacttgtaaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +actgtcggtggccagatggggatgctcctcacaggggcaaatgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaaacgtggcaatgatatagttgtcgcgggtgtccacaccgcagca +gcccggggaggcaacactgtcatatgtgccactcaaggacaagatggggaggcagtccttgagggaaatgag +aaccttggcacttactgcggtgccccaattttgggtccaggcaaggcgcccaaacttagcacgaagaccaaa +ttctggcgttcatcaccagacgctttgccgccaggcacttatgagcctgcctacttgggaggcaaggaccct +agagtggaaaaaggaccatccctgcagcaagtcatgagggaccagctaaaacctttcacagaacccaggggc +aagccacctagacctgcagtcttagaagaagccaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaaaccatggacctattcccaagcatgtgcctcactggacaagaccacttccagtggtagcccccat +catgtcaggaaaaatgaccattggaatggggaatccttcactggcccccttgcagaccaagcatccaaagcc +aacctcatgtacgagcaggccaaacatgtgcagcccgtgtacacggccgcactcaaagatgagctagtcaaa +actgacaagatctacaaaaagataaagaaaaggctcttatgggggtcggaccttggtacaatgattaggtgt +gccagggcctttggcggtctcatggatagtatgaaggcaagttgcatagcccttccatgtagggtaggaatg +aacatgaatgaagatggtcccatcatatttgacaaacactctaagtataggtaccattatgatgctgactat +t-ccaggtgggactcaacccagcaaaggagcattctctcggccgctatggaagtgatgg-tgcggttctctg +ccgaaccagagct-ggcacaagtggttgcagaggacctcctggcacctagccaactagatgttggcgacttt +gtcatctcagtccaggagggtctgccatcgggggtcccatgcacatcacaatggaattcaatagcacactgg +atcctaaccttgagtgcgatggcagaagtgtcgggtctctcaccagatgttgttcaagcccattcctgtttc +tcattctacggtgatgatgagatcgtcagcactgacatcaaccttgatcccatgaagttgacacagaaactc +agagagtatggtctggttcccactcgacctgacaaaactgagggtcccctcgtaataactgaagatctcacc +ggcctaacgttcctgcgtaggtcaattgcacgggacccagctgggtggtttggaaaattggaccaagactca +atcctcagacagttgtactggacaaggggccccaatcatgagaacccatatgagagcatggttcctcattcc +cagcgggccacacagctcatggcccttctcggtgaggcttcactgcatggcccccagttttacaagaaggtt +agcaagatggtcatcaatgaaatcaaaagtggtggtctggaattctatgtgcccagacaagaggccatgttc +agatggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgtcgtcggccaacaaaacataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcaccgtttcaccgaggaactcgcccgg +tgagatgctattaaatcttgaattgggcccagagctcaacccttacctaagtcacctgtcccgtatgtataa +tgggtatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacattttcccgtagaaaacatcagtgcagctcaaataactatgtgcccccatgt +aattgttgatgtgagacaacttgaaccagtacttctgccccttcctgacataaggaataggttctttcatta +caaccaggagaacacc---ccccggatgagacttgtggctatgctttatacccccctgagggc---caactc +tggtgaagatgtgtttactgtttcttgcagggtcttgacccgtcctgcccctgattttgaatttactttctt +ggtaccaccaactgttgagtcaaagactaaacctttcacactgcccatattaactcttggtgagctatctaa +ttccaga---ttcccagccccaatagatatgttgtacactgacccaaatgagggaattgtggtccaaccaca +aaatggtaggtgcactcttgatggcactctgcaaggcaccacacaactggtccccacccaaatttgtgcttt +caggg-----------------------------------------gcacactaattggccaa--------- +----------acatcaagatct------tc----------------------------agactcaaccg--- +--actcagcccct--------cggagaaggg----------------atcaccca----------------- +----------ctccatgtgcaattaaagaaccttgatggcacgcagtacgacccgactgatgaagtgccagc +agtccttggtgccattgacttcaaggggactgtctttggggtggccagtcaga---gagatgtgtcagggca +-----ac---aagtggga---------gcgact--------cga-----------gctcatgaagtgcacat +caacacaaccgatcctaggtacacaccaaaactgggatccattctcat---gc---------actcagagtc +ggacgactt---tgtgactggacagccggtcc---------------------------gtttcacaccca- +--------taggaatgggtgaca---------------------acgactggcaccagtgggagctgcctga +ctactctggacac-ctaacc------ctgaacatgaaccttgccccagcagtcgctcctgctttcccgggcg +agaggattcttttcttcaggtcaatggtcccgt------ctgctggtggcta------tgggt--------- +--ctggacaaatagattgcctcatgccacaggagtgggttcagcatttctaccaggaagctgcaccatccca +atctgccgtggcacttattaggtatgtcaatcctgacacaggcagaaacatctttgaggctaaattgcacag +ggaaggtttcatcaccgtggcaaattctggtaacaaccctattgttgtcccccctaatgggtactttaggtt +tgaggcttgggtgaatcaattttacactttgacccccatgggaactggtcaggggcgtagg---------ag +gaatc---------aataatggctagtgcttttcttgcaggtcttgctggcgacgtcataacaaatggcgtt +ggatctctaataaatgctgg---agctaatgcagtcaatcagaaagttgaatatgattttaataaacag--- +------------------------------cttcaaatggcatcatttaaacatgataaagagatgttgcaa +tcacaagtgttggcaaccaagcagttgcagcaggagatgatgaacataaggcagggggtgttgactgctggc +ggcttctcccccgcggatgctgctagaggggccgtcaatgccccaatgacaaagattctggactggaatggc +accaggtattgggcaccaaatagcatgaaaaccacaagttattcagg-acagttttctagcagccctgttca +ca-----------agtcccctgctccttctcagcacactgcttt---------------------------g +ccaa-------------------agagtagattgcaa----------------------------------- +----------------------------------------------------------------------aa +tgattttg-----------ctagtgtatatagtttcccttcctctgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtcag-------cagg--------aa +ccgggtc----t---tccag-------------------gtccatctccccat---------ccacagcgac +ccctac-------------------ctt--------------gtctagaaccagcgactgggttaggggaca +gaatgagaggctcagcccgtttatgg---atggtgctctccaaactgcctttgtcacacctccatcgagcaa +agcttct---tcaa------------------------------atggta---cggtctcaaccgttcccaa +agctgttttgga-ctcctggacccctatgt------------ttaacacacataggcagcctctcttcgccc +acccacgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagagtg-------- +-------atc-aggt--------------------tttcttc------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ407073.1/1-7509 |Norovirus Hu/GII.4/HS292/2012/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------ctcccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtatttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggagatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtacacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +tccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtactaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgatacttgtcccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccacgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacgtttcaatcaagaagtgccaaatagtgtatagtggttgtacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaacgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgcccaggaggccctgtattccatcattc +aaattgccggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaaaaaca +agactggccgcggcaagaagcacacagtattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagccactctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgattttagaagaaggcgcacctgagggcaccgtggccacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgactatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcatcggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagtatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcgttgcagcaagtcatgagggaacagttgaagccattcacagaaccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaacatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagctttcggaggcctgatggatgagctcaaaacacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcgatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagatctgaat +ggcctaactttcctgcggagaacagtgacccgcgacccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccgtctgaaacaatgattccacactcc +caacgacccatacaactgatgtccctattgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaacaatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattttctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gtgatgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggcagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatacaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccactttcccaggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctcttttaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttcctcc------------------aa +cacgtctt-----------caagc------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ407074.2/1-7496 |Norovirus Hu/GII.2/HS255/2011/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaacgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcaggtgaag---------------gcttattcacaaatat +gtcttccaccttaaagaaag----ccctcggggcccggcccaaacagtct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaactcccgagttggtt-------aagaggatacc +ccc-----------------------------tcccccacctaatggtgaagaagaa---gaaccagccatt +aggtatgagg----------ttaa---gggtgggatctctggcctgcccgagctcacaacagtcccccaacc +agatgtggccaacacggcattcagtgtcccaccgctgagcttgagagaaaacagggaggccaaggaaccgct +gacaggggcaatattagagatgtgggatggagagatataccactatggcctgtacgtggaaaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagcatggcaaaagtggagctgacgccgttgtcattgtactg +gcgtgtggtctacacccccc---aatacctcatctcccctgaaactctcaggaggctcaacggagaggcatt +cccttacaccgcctttgacaacaactgctatgccttttgctgctgggtattagacctcaatgactcatggct +taa---caggaggatggtgcaaagaacaacaggcttcttcagaccttaccaagagtggaacagaaaacccct +gcctactgtggatgactccaaaatcaagaaggtggcaaacatattcctgtgttcattgtccacgttgttcac +cagacctataaaagacctcataggaaaaattaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacattcgccggaatagtggagtctctgatattacttgctgagctcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttgaagactacgagttgcaagggccagaagacctcgccgttga +gctcgtacctgtggtaatgggagggattggtttggtgttgggattcaccaaagagaaaattggcaaaatgtt +gtcctcagcagcatcaacgctcagggcttgtaaagatcttggtgcctatggcttagagatactcaaattggt +catgaagtggttcttcccaaagaaagaagaggccaatgagctagccatggtgagagctatagaggatgctgt +actggatcttgaggcaatagaaaataatcacatgacaactctgttgaaagacaaagacagcctagcaaccta +catgaaaaccctggacatggaggaggagaaagccagaagattgtccacaaaatctgcatcccctgacatagt +cgggacgatcaacgccctgctggctcgaatagcagcggcaaggtcactagtccacagggccaaggaggagtt +atctagcaggataagaccagtagttgttatgatatctggcaaaccagggataggtaaaactcatttggccag +ggaagtggcaagaaaggtggcatccactctcacaggggatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagagtcgtgctgtgggacgactatggcatgagtaaccccattca +tgatgctttgcgcatacaagaattggctgatacgtgtccccttaccttaaattgcgacagaattgaaaataa +gggaaaagtttttgacagtgaagttataataattacaacaaaccttgccaatccagctccacttgattatgt +caactttgaggcttg-ttccaggagaattgacttcctggtgtacgccgaggcaccagatgtagaaaaggcaa +aacgagactttcctggtcaaccagatatgtggaaggacgcattcaagtcggacttttcacatatcaagttgc +aacttgcacctcagggcggctttgacaagaatggcaacaccccacatggtaaaggagtgatgaagaccctca +ccaccggttccctgattgcccgtgcatcaggcttactgcatgagaggatggacgaatttgaactccaaggcc +ccacagttaccaccttcaatttcgatcggaacagaatcaccgcattcagacaattggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaatcaattaaaaggggtgaaaaccatggaagaactcaaacaag +caatcaggaatgtgatcatcaagaggtgccggatcatctacggtggctccacgtatgaccttgaatctgatg +gcaagggcaaagttttggtggaaaaggtcaagaacacctctgtacagaccaacaacgagttggccggagccc +tgcatcacctcaaacatgcccgaatcaggtactatgtcaaatgtgtgcaagaagcagtttactctatcatac +aaattgccggcgctgcgtttgtcaccacacgcattgcacgccgcatga------acatacaagagctttggt +cgaagccaccatt---agaccaaaatga--------atcagaggctaaggaagaggtccccaagtcagaa-- +-gat-------gacg---agttcatcatatcttctaaggacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacactgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaagaggacttctgtgaggaggaggaggtcagaatccgtcaga +ggatcttccgtcccaccaggaaacaaaggaaggaagagagggccacactaggactagtaactggttcagaaa +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaactgtgggccgatgacaacagaagtgttgact +acaatgagaaactggactttgaggcccccccaagcatatggtctaggattgtgagctttggttctggttggg +gcttctgggtatcac-caagcctgttcataacatcaactcatgtaatccctgcaggcataacagaggcattt +ggagtccccatcaaacaaatccaggtccacaaatcaggtgaattttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcttggaagaaggtgcgcctgagggcaccgtggcaaccgtgctcatcaaa +cgccctaccggagagctcatgccccttgcagccagaatggggacacacgcagccatgaaaattcagggccgc +atggttggcggacagatgggtatgttgctcactggttcaaatgctaaaggaatggatttgggaacaactcct +ggtgattgtggctgtccctacatctacaaaaggggcaatgactatatagtcattggtgtgcacacagcagca +gcccgtggtggaaacaccgtcatctgtgccacacagggaagtgagggtgaggcaactcttgagggtggagat +gacaaaggaacatactgtggggcacccattctaggccccgggggggcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcgaacacgcctcttccaccagggacatatgagcctgcctacctcggtggccgcgacccg +cgtgtcaagggagggccctccttgcagcaggtaatgagagaccagttgaaaccattcactgaacccaggggt +aaacctccaagaccaagtgtgttggaagcagccaaacaaaccatcatcaatgttctcgaacaaaccctggac +cctccacaaaaatggacgtacgcacaggcgtgtgcttcacttgacaaaaccacctccagcgggcatccctat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggtaaattggcagaccaagcatcaaaagca +aatctgatgtttgaggaagggaagcacatgacaccagtgtatacagcagcccttaaggacgagctggtcaag +actgacaaagtctatggaaggatcaagaagagattgctctggggctctgacttgtccaccatgatccggtgc +gccaggtcctttggtgggctcatggatgagatgaaggcacactgcacatcactcccagtccgagttggcatg +aacatgaatgaagatggtccaataatatttgagaagcactccagatacaagtaccactatgatgcagactac +t-cccgctgggattcaacacaacagagggcagtactagcagcagccttggaaatcatgg-tcaggttctctg +cagagccacaatt-ggcacagatagtcgctgaggatctgctggcccccagtgtggtagatgtaggagacttt +aaaatttcaataaatgaagggctcccctctggtgtaccatgcacttctcaatggaattccatcgcacactgg +ctgctaaccctctgtgccttgtctgaagtcaccaaactgtcccctgacattgtacaggcaaattccatgttc +tcattttacggtgatgacgagattgtcagcaccgatataaaattggaccctgaaaagttgaccaccaaattg +aaggagtacggcctgaaaccaactcgcccagacaaaaccgagggacccctgatcatcagtgaggatttgaac +ggactcacttttctccggaggacggtgactcgtgacccagctggctggtttggaaaattggaccaaagttca +atattgaggcagatgtactggactagagggccaaatcatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaaaatc +agtaaattggtcataactgaactcaaagaaggtgggatggacttttacgtgccaaggcaggaacccatgttc +aggtggatgaggttctctgacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacagtga +ggtcatggctcttgaacccgtggctggtgccgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccccaatggcgaatttacagtctctccccgtaatgcccctgg +tgaagtgctactaaatctagagttgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgttagctgggaacgcgttcacagc---cggcaagttggt +cttcgccgccgtgccacctcacttcccggttgaaaaccttagcccacagcaaattaccatgttccctcatgt +gattatagatgtaaggaccttggaacctgttttattaccactccctgatgttaggaataatttcttccacta +taatcagaaagatgat---cctaaaatgagaattgtggctatgctttataccccccttaggtctaatggttc +aggtgatgatgtgttcacagtttcctgcagggtgttgactagaccctcccctgattttgacttcacatatct +ggtgccaccaacagtggaatctaaaacaaaaccattcaccctcccaatcctcacacttggggaactttccaa +ttctagg---ttcccagtgtccatagaccagatgtacaccagccctaatgaagttatatcagtgcagtgtca +aaatggtaggtgcacattggacggggagcttcaggggacaacacaactccaagtcagtggcatttgtgcttt +caagg-----------------------------------------gggaagtgaccgccc----------- +-----------acttgca------------------------------------------------tg---- +-------acaatg----------------------------------atcac-------------------- +-------ctatacaatgtcaccatcacaaacttgaatgggtccccttttgacccctccgaggacgttcctgc +ccctctgggcgtgcctgacttccagggaagggtctttggtgtcatctcccaaa---gagacaaacacaatag +ccct--------gggcataatgaaccagcaaac--------agg-----------ggacacgacgctgtggt +ccctacttacacagcacagtacactccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---tacagtcaaccaaccagtca---------------------------aattcaccccag- +--------ttggactc---------aatgacactgaacat---------tttaatcaatgggtggtccccag +atacgctggtgcc-ctaaac------ctcaacacaaaccttgccccttctgttgctccagtatttccagggg +agcgcctgcttttcttcagatcatacgttccc------ctcaagggtggtta------tggaa--------- +--atccagccattgattgcctattaccacaagagtgggtgcaacacttctatcaggaggctgccccatcaat +gagtgaggtggcccttgtcaggtacattaacccggatactggtcgggcactgtttgaggccaagctccacag +agctggtttcatgacagtctcgagcaacaccagtgccccggtggttgtgcctgccaatgggtacttcagatt +tgactcttgggttaatcaattctattctctcgcccccatgggaactggaaatgggcgtaga---------ag +ggttc---------aataatggctggagcctttgtagctggtcttgcaggggacgtgctcagcaatgggctc +agttcattaattaatgcagg---tgccaatgcaataaatcagagggcagaatttgattttaatcagaaatta +cagcaaa---------------------------------attctttcaatcatgataaggagatgttgcag +gcccagatccaggcaactaagcagctgcaggcagacatgatggctataaaacagggggtcctgacagctggc +ggcttttcccctgctgatgcagccagaggtgctgtgaatgcgcccatgacacaggcgctggattggaacggc +acaaggtattgggcaccaggctctatgaggaccacatcttattctggaaaatttacatcaacc--------- +gc---------------------cccagtgaggcaggccgact----------------------------- +tccagca----------------cacccaaagccggcct-tc--------gagtgg---------------- +------------------------------ttcttctgtgtcctcctttgcc------------------ac +tcagtctt-----------caagg------------ccaactctgaccacaacca----------------- +----------ctgggt-----cctcacatgg------cacagcctcatc-----------aa--------at +tcaactcgc----agcacaagcctctcccaatcaacggtctc------tagag------------------c +tacatc---------------------------------------taggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacggcctttgtcaccccaccttccagcag +ggcgtct---gac---------------------------------ggga---cagtctcaaccgtcccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctctttgcac +acctccgtaagaggggggagtcaca--------tgcttag--t-----------gaaaag------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ407075.1/1-7509 |Norovirus Hu/GII.4/HS288/2012/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggcttcttcagaccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggacctcgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcctgcaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaacgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacactagaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtattgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaaactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagggttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtcttaatcaaaaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaaccggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccgacaagaaaacaacgcaaggaggaaagatcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgccgcttgagattcccaaaaccaatt +aggactgatgtgacgggcatgatattagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctataagaggggtaatgactatgtggtcattggagtccacacggctgcc +gcgcgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatctttgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +aaggagtatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctattgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtggttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----actagtacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagtccaatttgcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggccggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttctttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggattacaacatataatgcaggccgctttcccacccct--------- +ca---------------------actctcgggggcact---------------------------------g +ccaggaa----------------gagcaaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggctccccc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcttga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KJ407076.1/1-7506 |Norovirus Hu/GII.4/HS66/2001/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagcgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaacacggccttcagtgtccccccactcaaccagagggaaaatagagatgctaaggagccatt +gactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctgacaccactctccttgttttg +gagacctgtgtatactcccc---agtatctcatttctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgttatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaaccggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatccttaacatcttagcctcatgtgattg +gactttcgcaggcatggtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaaaagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagatgaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccagaaagctctcaaccaagtccgcatcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccgagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcatacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagatctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaaagatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactacgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctaccaacaaggacgggtgcctaaaacctaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcgagcaaaggtctcagtgatgaggagtacgacgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgcgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +agacctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccactacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccgtcatcaatgtccttgaacaaacaatcgac +ccacccgagaaatggtcattcacgcaagcttgcgcgtcccttgataagactacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggattccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcgcactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagagacattccaggtacaaatatcactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagatttaaat +ggtctgaccttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggtcccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccatcattctacagcaaaatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taaccaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ctcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgacggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggctcgacc--------cgc-----------gcccacaaagccacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtacttccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccactttcccgggtg +agcaacttctcttctttaggtccactatgcccg------ggtgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacactggcccacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgcaga---------cg +tgtat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttctttccaatttagtagcaatctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggccactaagaaattgcaacagggcatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggga----------------gaaataaccttagggccac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +cacacttt-----------ctagc------------attcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggcaccagtgtctcgagtcttccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaaaaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC577174.1/1-7548 |Norovirus Hu/GII.4/Jiangsu1/2011/CHN, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------at----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aggaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggaccttgcagtaga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaagagct +ttccagcagaccaaggcctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgtccccttactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgatttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgctcgcctttagacagctagctgctgaaaacaaat +atgggttgatagacacaatgagagttgggaaacagctcaagaatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggcactgaga +tcaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggacctggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcccagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgtacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgtcgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtagta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaattccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttctctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgctactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctatacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattttctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcgcc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +tacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc------------ct----t--------ttct-- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC577175.1/1-7547 |Norovirus Hu/GII.4/Jiangsu2/2012/CHN, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccatt +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaagagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaatgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggagtccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggagattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaggacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtatacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcattgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gwtggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcacggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggcgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacctttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggctatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagttaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtgggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-t-----t--------ttc--- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF509946.3/1-7531 |Norovirus Hu/GII.4/AlbertaEI063/2012/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattgat +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgatcctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctatctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctatacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggagtaccttgtacctctcagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacattattcaggccaactcccttttc +tccttttatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagacccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tggt-----ta-----t------ctttc----------t---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF509947.2/1-7483 |Norovirus Hu/GII.4/AlbertaEI337/2011/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor capsid protein genes, complete cds +--------------------------------------------cgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagcgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaagcagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatccc +ccc-----------------------------ccccccgcccaatgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaaacaacc +ggaagaatctaacacggccttcagtgtccccccactcagtcagagggagaatagagatgctaaggagccact +tactggagcaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtctcgt +actaggtgtgcacaaaccaccagctgccatcagcctcgcaaggattgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgattcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +tcccactatggatgactccaaactaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataataaggaaactaaagcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatgggtggaattggtttggtgctagggttcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagacctcggtgcatatgggctagaaatcttaaagttggt +catgaagtggttcttcccgaaaaaggaggaagcaaatgaattggctatagtgagatctatcgaggacgcagt +cttggatctcgaggcaattgaaaacaaccacttgaccaccttgctcaaagacaaagacagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacattgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgatgatgatatcaggcaagccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctttgggatgactatggaatgagcaaccccgttca +cgatgccctcaggttgcaagaactcgctgacacctgccccctcactctaaactgtgacagaatcgagaacaa +aggaaaggtctttgacagcgatgtcatcattattactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcgcacataaaactgg +cattggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagaccctca +ctactggctcccttattgcccgggcatctgggctactccatgagaggttagatgagtttgaactacagggcc +caactctcaccaccttcaattttgaccgtaataaagtgcttgcctttagacaacttgctgctgagaacaaat +atgggttgatagacacaatgagagtggggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgaatctgatg +gcaagggcaatgtgaaagttgacaaaactcagagcgcctccgtgcagaccaacaatgaactgactggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gaccactaacaaagacggatgcccaaagcccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagggaggaaaggaatggtaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaagcaacgaaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcagacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataacgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaagagttcttt +ggagtccccatcaagcaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcgcctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaacttatgcccctagcagctaggatggggacccatgcaactatgaagatccaagggcgc +actgttgggggccaaatgggcatgcttctgacaggatccaatgccaaaagcatggatctgggtactacgcca +ggtgattgtggctgtccctatatctacaagagaggtaacgactatgtggtcattggagtccacacagctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aataaggggacatactgtggcgcacccatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccgcctggcacctacgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagagatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagcggtcatccgcac +cacatgcggaaaaacgactgttggaacggggagtccttcacaggcaagctggctgaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgccctcaaggatgaattagttaaa +actgacaaaatttatggtaaaatcaagaagaggcttctctggggctcggacttggcgaccatgatccgttgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacgcatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttcccctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgcgcgctctctgaagtcacaaatttgtcccctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaactggacccagagaaattaacagcaaagctc +agggaatatgggttaaaaccaacccgccctgataaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtattggactaggggccccaaccatggagacccatctgaaacaatgatcccacactcc +caaagacctatacaattgatgtccctactgggggaggccgctctccacggcccagcgttctacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggcggcatggatttttacgtgcccagacaagagccaatgttt +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacctacagttgagtcaagaaccaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcccttggagaagttgttcacgggtcccagcagtgcttttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gccgca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgaca--------cgc-----------ggccacaaagctatagt +gtacactgggagcgccgactttgctccaaaattgggtagagttcaatttgaga---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcacccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggcaga-aatact------cacaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgcaga---------cg +tgtag---------tataatggctggagctttctttgctggattagcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctggagggt +gggttctctgagacagatgcagcccgcggggcaatcaatgcccccatgacaaaagctttggactggagcggg +acaagatactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accgtcgggggcatt---------------------------------g +ccaggaa----------------gagctaatctcagggatgc------------------------------ +------------------------------tgtccccgctcggggttcctct------------------aa +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaagaatttgtcacctttcatga---ggggggcccacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaa--------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC962453.2/1-7567 |Norovirus GII strain GII/Hu/ZAF/2010/GII.P4_GII.4/Bushbuckridge/5928, partial genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagcct-cccccgagggaaataccacag +aga---------------------cccccacgaccacctactccagaactgatt-------aagaatgttcc +ccc-----------------------------ccccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +taccggatcaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagatctgtgtacactcctc---aatacctcatctccccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactctaaattaaagaaggtagccaacatattcttgtgtgctctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgctcccttactcggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatgggtgggattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagacctcggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatagtgagatctatcgaggatgcagt +cttagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtttggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctctttggttcatcgagcaaaggaggaact +ttccagcagaccaaggcctgtagtgttgatgatatcaggtagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +tgaccattgggatgcgtacaagggggagagggtcgtcctttgggacgattatggaatgagcaaccctattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccgtgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgacttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcacgaagtctctca +ccactggctcccttattgcccgggcaaccgggttgctccatgagaggttagatgaatttgaactacagggcc +caacactcaccacctttaacttcgatcgcaataaagtgcttgcctttagacaactagctgctgagaacaaat +atggactgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacaaaattcagagcgcctccgtgcagactaacaacgagctgaccggtgccc +tgcaccatttgaggtgcgccaggattagatactatgtcaagtgcatccaggaagccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ctaagccacaagtggaagacacagagga--------gaccaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagggaagaaaggaatggtaagtattccgtaaaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaactgaggaagacttctgtgaagagggggaggccaaaatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaaatacacaagtcaggcgagttctgccgcttgagattcccaaagccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtagtcacactacttatcaaa +aggcccactggggaactcatgcccctagcagttaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccaaatgggcatgctcctgacagggtccaacgccaaaagcatggacctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggcaatgactatgtggccattggagtccacacggctgct +gctcgtgggggaaacaccgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +gacaaggggacatactgtggtgcaccaatattaggcccagggagtgccccagcacttagcaccaagaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agaatcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaagcttccaaagcc +aacctgatgtatgaagaagggaagaatatgaccccagtcttcacagcttcgctcaaggatgaactagttaag +actgacaaaatttatggtaagatcaggaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagctttcggaggcctaatggatgaattcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaaatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtgatggacgtgggcgacttc +acagtatcaatcaatgagggtcttccctccggggtgccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggactcagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttaaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacaatatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cggaaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgtttccccatat +agtagtagatgttaggcaactggagcctgtgttgatccccttacccgatgttaggaataatttctaccacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtttcttgtcgcgttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctatcccagttttaactattgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcagcgcctttgttgttcaaccaca +aaacggcaggtgctcgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------ta---- +-------gccaca----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacagttatgatccaacggaagaaatcccagc +ccctttaggaactccagatttcgtgggcaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +actcactgggagcgccaactttactccaaagctgggtagaattcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatacccg------gatgcagcgggta------cccca--------- +--atatggatttggactgtctgctcccccaggaatgggtgcagttcttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgaatgcaagcttcataa +atcaggctacattacagtggcccacacaggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttcctttcaatttagcagcaatttacaacaggcttcctttcaacatgataaggagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcagtgctcctagagggt +ggattctctgagacagacgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------g +ctaggga----------------gggctaatcttagggctgc------------------------------ +------------------------------tgtccccactcggggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aa---ggaacttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------ct---gtcttttaaaaaaa-------------aaa---------------------- +------------------------------------------------------------------------ +- +>KC962462.3/1-7570 |Norovirus GII strain GII/Hu/ZAF/2011/GII.P4_GII.4/Empangeni/8491, partial genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacaacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaaagtattcc +ccc-----------------------------ccctccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctcgaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtctcgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +caggcccataaaagacataatggggaagctaaagcctctcaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggaatccctgatactcttggcagagctcttt---ggaattttctggacgccccc +agatgtgtctgcgatgattgcacccttactcggtgactatgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatgggtggaattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatccgctgcatccaccttgagagcatgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaaaaaggaggaggcgaatgaactggctttagtgagatctatcgaggatgcagt +cttggatctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtaatgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccgcgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctttgggacgattatggaatgagcaaccccattca +cgatgccctcaggttgcaagagctcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccacttgactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagatgcccctgacgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgacttctcacacatgaagctgg +cattggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaaggctctca +ccacaggctcccttattgcccgggcatctgggttgctccatgagagattagatgaatttgaactacaaggcc +caactctcaccaccttcaattttgatcgcaacaaagtacttgcctttagacaacttgctgctgagaacaaat +atggactagtggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagagtgtctcaatcaagaagtgccagatagtgtatagtggttccacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcgcgtccgtgcagaccaacaatgagctgaccggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ccaagccacaagtggaaaacacagagga--------gaccaccaacaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaggggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagggaagaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +gaatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcgggttggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgagttctgtcgcctgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtctcactactcatcaaa +aggcccactggggagctcatgcccctagcagctagaatggggacccatgcaactatgaagatccaagggcgt +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctataagagaggtaatgactatgtagtcattggagtccacacagctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccgcctgagaaatggtcattcgcgcaagcttgcgcgtcccttgacaagaccacttccagcggtcacccgcac +cacatacggaaaaatgatggttggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgcttaaagatgaattggtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggacttgggaaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacgcatatcactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaggacctcctttcccctagcgtggtggacgtgggcgacttc +acaatatcgatcaacgagggtcttccctctggggtgccttgcacctcccaatggaattccatcgcccactgg +ctactcactctctgtgcgctctctgaagtcacaaatttgtcccctgacaccatacagacaaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgataaaactgaaggaccccttgtcatctccgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattctacagcaaaatc +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctaggaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cgggaagatcat +atttgcagcagtcccaccaaatttcccaactgaaagcttgagccccagtcaggtcactatgttcccccatat +aatagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +taatcaatcaaatgac---cccactatcaagttgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgaggccatcccccgattttgacttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgattgacggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcata----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaca----------------------------------actacaca----------------- +----------------atgaatttggccactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtactcacccaaa------------------- +-----cc-----acaaagacagatggctcgaca--------cgc-----------ggccacaaagctacagt +gtgcattgggagcgccgactttgctccaaaattgggtagagttcaatttgaaa---------ctgacacaaa +caatgatct---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccagaatggtgaaactgcccacaggaatgaaccccaacagtgggtgctcccgag +ttactcaggcaga-aatact------cccaatgtgcatttggcccccgctgtagcccccacttttccgggtg +aacaacttctcttcttcagatccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctactaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggttcacatgatttggttatcccccctaatggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcaa---------cataatggctggagccttctttgctggattggcatctgacgtccttggctctgggctt +ggttctctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaagcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcagcaggaaatgatgaaagttaaacaggcagtgctcctagagggt +gggttctctgagacagatgcagcccgtggggcgatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcggggatact---------------------------------g +ccgggaa----------------gagctaatcttagggatac------------------------------ +------------------------------tgtccccgctcggggttcctcc------------------ag +cacatctt-----------ctaaa------------tcttctattgctactt-------------------- +----------ctttgt-----attcaaatca------aactgctacaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----tct---------tt- +-------a-------ga---gtctttgaaaaaaa-------------aaaa--------------------- +------------------------------------------------------------------------ +- +>KF712491.1/1-7509 |Norovirus Hu/GII.4/NIHIC17.8/2013/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacacycctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaggagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagcacctccgttcagaccaacaacgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttrtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgaagagtaca +agagagttagagaggaaagaaatggcaagtactccatagaggagtatcttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggyctactggtgaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggytggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttattgggagaggccgcactccacggcccagcattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccrcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccayaaagctacagt +gtacactgggagcgccgacttttcyccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatrctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gaagcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagyatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712492.1/1-7278 |Norovirus Hu/GII.4/NIHIC1.8/2012/USA, partial genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------------gatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgatcgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagttaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctatctatctcatttgtccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaagggaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggagcgccgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgat---acccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttgtttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712493.1/1-7505 |Norovirus Hu/GII.4/NIHIC1.10/2012/USA, partial genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatatagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +taatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaagggaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggggcgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgat---acccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttgtttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712494.1/1-6991 |Norovirus Hu/GII.4/NIHIC1.7/2012/USA, partial genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---------------------------------------------------------------------ctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagtagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagaatttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccactt +aataatagatgttaggcaactggaacctgtgatgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattttaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacaaa------------------------------------------------aa---- +-------ctcata----------------------------------gctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaagggaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggagcaccgaattcactccaaaactgggtagaatccaacttgtca---------ctgacacaga +caacgatct---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgat---acccaccaaaatgaaccccaacaatgggtactcccaag +ttacttaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttgtttatcccccccaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgctt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712495.1/1-7508 |Norovirus Hu/GII.4/NIHIC17.3/2012/USA, partial genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------rgaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgwtgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagrttgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-rat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agyaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgay +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataycattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctccyagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgtyatttctgaagacttagat +ggyttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggycccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttaytgggagaggccgcactccacggcccaacattctacagtaaaatc +agyaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tcyaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgccactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gatscagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +accaggctatgttacagtggctcacactggtcaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgccccyatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctytcgttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcytagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggarcggg +acaaggtactgggctcccgatgctaggactacaacatayaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccgggattcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712496.1/1-7509 |Norovirus Hu/GII.4/NIHIC2.3/2010/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggccaaaacaggcc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaagagatccc +acc-----------------------------tcccccgcccaacgg------ggaagatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaacaatacggccttcagtgtycctccactcaaccagagggagaatagggatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacamggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +tag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaaggtaaagcccctcaacatcctcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +actcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaasaggaarmgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacycttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagactcatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggggaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccctgaggtcgaaaaggcga +agcgcgatttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaatgggaacaccccacacgggaggggcgtcatgaagtctctca +ccactggctccctcattgcccgggcatcggggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaggtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaacgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagayttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaagaaacaacgcaaggaagaaagagcttctcttggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacttactgtggtgcaccaatcctaggcccagggaatgccccaagactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggcggcaaagacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgaacagacaattgac +ccacctgagaagtggtcattcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaaggaaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagatctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaarcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggaagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtaatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatctctgaagacttagac +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaaggcccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaatgcgtttaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccayat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaagccatttactgtcccaatcctgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaarttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttrggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttggcaa------------------------------------------------tt---- +-------ctcgya----------------------------------gttacaca----------------- +----------------atgaatctggcctctctaaattggaacaattatgacccagcagaagaaattccagc +cccactgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggagagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +yaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggaagatagyaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtgcacctggcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccacyatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcttgtttgagtgyaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttagtcattccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagagggt +ggattctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggga----------------gaatcaattctaggactyc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tatatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +atctgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712497.1/1-7509 |Norovirus Hu/GII.4/NIHIC27.2/2012/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccccaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattacggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacacactcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcggtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttactcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaatgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggttcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttaaggtgtgccagaataagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagtaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaagaaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctccctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacaatt-ggctcaggtagttgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacaacaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggagacccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagcttaaagaaggtggtatggatttttacgtgcccagacaagagcctatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaatcat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaagttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccactcagagccaataatgc +cggggatgatgtcttcacggtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggagcaattacgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtattcaatttgcta---------ctgatacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------gattcaccccag- +--------tcggtgtcattcaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccaggtg +aacagctccttttcttcaggtccactatgcccg------gatgtagcggata------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacatgatttggtcattccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaggattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagtagtaatctacaacaagcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctactaaaaagttgcaacaggaactgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tatccccgcccggggctcccca------------------ag +catatctt-----------ccaat------------gtttctactgctaatt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccgatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712498.1/1-7509 |Norovirus Hu/GII.4/NIHIC17.9/2013/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtycccccactcaatcagagggagaatagggatgctaaggaaccact +aactggracaattctggaaatgtgggatggagagatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgwtgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagrttgggaaaatgtt +gtcatctgctgcatcyaccttgagagcttgcaaagaccttggtgcataygggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaggaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaayaa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtrcagagcacctccgttcagaccaacaaygagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttrtggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgaagagtaca +agagagttagagaggaaagaaatggcaagtactccatagaggagtatcttcaggacagggacaratac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggytcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggyctactggtgaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggayctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagytggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtrgtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttattgggagaggccgcactccacggcccatcattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaycatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcaacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacayt------cayaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gaagcagcgggta------cccca--------- +--acatggatttggactgtctrctcccccaggaatgggtgcagcatttctaccaggaagcagccccagcaca +atctggtgtggcyctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctytckttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctycaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacargcaatgctcctagagggt +gggttytctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgc-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712499.1/1-7503 |Norovirus Hu/GII.4/NIHIC1.16/2012/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatgtagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtagggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttctcaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaaggaaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggaccgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga------ccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttggttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712500.1/1-7500 |Norovirus Hu/GII.4/NIHIC1.14/2012/USA, partial genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatgtagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtagggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttctcaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaaggaaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggaccgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga------ccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttggttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712501.1/1-7509 |Norovirus Hu/GII.4/NIHIC17.6/2012/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaggagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagcacctccgttcagaccaacaacgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgaagagtaca +agagagttagagaggaaagaaatggcaagtactccatagaggagtatcttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttattgggagaggccgcactccacggcccagcattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttccccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatactaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gaagcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712502.1/1-7509 |Norovirus Hu/GII.4/NIHIC35/2013/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------racagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacactacaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcaaggtcttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatttctccagacgccctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccaaagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctcttaacatcatcaacatcctggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatggactagagatcttaaaattagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaactta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagtagaccaagacctgttgtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaggcttg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaatgcttttagctctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagactggatgagttcgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttmagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgtacctacacacttgagtctgatg +gcaagggcaacgtgaaagttgacagagtacagagtacctccgttcagaccaataatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaagccttgtattctatcatcc +agattgctggggcagcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgatgaataca +agagaattagagaggaaagaaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccgagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggaccgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtcaactggggaactcatgcccctagcagctagaatgggaacccacgcaaccatgaagattcaaggacgc +actgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgtggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggyacttatgaaccagcctaccttggtggcaaagacccc +agggtcaagggtggcccctcgctgcagcaagtcatgagggaccagctaaaaccatttacggagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgagcagacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtactggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttcttaccctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaagaatatgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaatcatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggtgaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttt +agatggatgaggttctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcaggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatcttaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttagaaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagcacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaagctrggtagagtccaatttgcca---------ctgacacaga +aaatgactt---cgttactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccagcaatgggtgctcccaag +ctactcaggcaga-aacacc------mataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------ccccr--------- +--acatggatttggactgtctgctcccccaggaatggatacagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtagg---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggycatcaatcaaaaagttgaatttgaaaataacagaaaactg +caacaggcttccttccaatttagtagcaacctacaacaagcttcctttcaacatgataaagagatgctccaa +tcacaaattgaggccaccaagaagttgcaacaggagatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagctcgtggggcagtcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatataatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggcgcc---------------------------------a +ccaggaa----------------gagctaaccttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------gg +cacacctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712503.1/1-7505 |Norovirus Hu/GII.4/NIHIC28.3/2012/USA, partial genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---ggatggcgtttccggcttgcctgayctttccaccgtcagacaacc +ggaagaatccaacacggccttcagtgtccctccactcagtcagagggagaacagagacgctaaggagccact +gactggaactattctggaaatgtgggatggagaratctatcattatggtctrtatgtggagcgaggtctcat +attaggtgtgcacaaaccaccagccgccattagcctcgccagaatagaactaacaccactctccttgttctg +gaggcctgtgtatactcctc---agtacctcatctctccagatactctcaggaaattgcacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatactcctgtgtgcactgtcttcgctattcac +caggcccataaaagatttaatagggaagctaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttgggagaactcytt---gggattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcawccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatagtgagatccattgaggacgcagt +tctggatctcgaggcaattgagaacaaccatatgaccaccttgctcaaagacaaagacagtctggcagtcta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgcagcacgctctctggtgcaccgagcaaaggaggagct +ctccagcagaccaagacctgtggtgatgatgttgtcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaacggcgt +cgaccactgggattcgtacaggggggagaggatcgtcctttgggacgactatggaatgagcaatcccatcca +cgatgccctcagactgcaagaactcgctgacacctgccccctcaccctaaattgtgataggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcaccactaacctggctaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgcgacttcccaggccaacccgacatgtggaagaacgccttcagctctgacttctcacacataaaactga +cactggctccacagggtggcttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccattggctcccttattgccagggcatcagggctactccatgagaggctagatgaatttgaattacagggcc +caaccctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgcagaaaacaaat +atgggttaatggaaacaatgaaagtcgggagacagctcaaggacgtcaggacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccaaatagtatacaatggtagtacctacacacttgagtccgatg +gcaagggcagtgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaatgagctggctggcgcac +tgcaccatctaagaagcgccagaataagatactatgttaagtgtgtccaggaggccctgtattccataatcc +agattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagagcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcttctctcggcctagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagcccccccaagcatctggtcgaggatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggaattcttt +ggggtctctgtcaagcaaattcaggtacataaatcaggtgaattttgccgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactacttattaaa +agatccactggtgaactcatgcccctagcagccaggatgggaacccatgcaaccatgaaaattcaagggcgc +actgtcgggggtcaaatgggcatgcttctgacaggatccaacgccaaaagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggttataggagtccacacggctgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagctacactcgagggtggtgac +aataaaggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaagctcagtactaagaccaaa +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagctgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcatttgcacaagcttgcgcgtcccttgacaaaaccacttccagtggccatccacac +cacatgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcggaccaagcttccaaggcc +aacctgatgtttgaagaagggaaaagcatgaccccaatctacacagctgcacttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgattcgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtatacataccactatgatgctgattac +t-ctcgatgggattctacacaacagaggggcgtgttggcagcagctctagagatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaggacctcctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggccttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttctatggtgatgatgaaattgtcagcacagatataaaattggacccggaaaaattgacagcaaagctc +agggaatatgggctgaagccaacacgccctgacaaaaccgaaggrccccttgtcatctctgaagacttggat +ggcctgaccttcctgcggaggactgtgacccgcgacccagcaggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcacttcatggcccagcattttacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctaccccatctga---tgggtcctcggccaacctcgtcccagaggtcaacaatga +ggttatggctttagaacccgttgctggcgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgtccttgggccctgatttgaacccctacctttcccacttgtctagaatgtataa +tggttatgcaggtagttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagtcccaccaaatttccgaactgaaggcttgagccccagccagatcaccatgttcccccacat +aataacagatgttagacaattggaacctgtgttgatccccttgcctgatattaggaacaatttctaccatta +taatcaatcaaatgac---cccactattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgttttcacagtctcttgccgagttctcacaaggccatcccccgattttgatttcatatttct +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcctaactgttgaggagatgaccaa +ctcaaga---ttccctattcctttggaaaagytgttcacgggccctagcagtgcctttgttgttcagccaca +aaatggtagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccgca----------- +-----------ttggaaa------------------------------------------------tt---- +-------ctcgcg----------------------------------agtacaga----------------- +----------------atgaacctggcctccctaaattggaacaattatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgcaggtaagatccaaggtgtgctcacccaga------------------- +-----cc-----acaaggcatgatggctcgacc--------cgc-----------ggtcacaaagccacggt +gtacactggaagtgccggattcaccccaaagctaggcagtgttcaattctcca---------ctgacacaga +caatgacct---tgaggccaaccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcatccaggacggcaacgc---ccaccaaggagaacctcagcaatgggtgctcccaaa +ctatgcaggcaga-gatggt------cacaatgtacacctagcccctgccgtggcccccactttcccgggtg +agcaacttctcttctttaggtccaccatgcccg------ggtgtagcgggta------tccca--------- +--atatgaatttggactgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atccgatgtggcattacttagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctacgtgacagtggctcacactggcccacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtagg---------cg +tgcat---------tgtaatggctggagctatcattgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagtcgattttgaaaataataaacaactg +caacaaaactccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgggaatcaaacaggcagtactcctaaagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggctcccaatgctagcaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------gccctcgggggcgtt---------------------------------g +ccaggaa----------------gaactaatctcaggactgc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtct-----attcaaatca------aactgtttcaac----------gag--------ac +ttggtac--------ttcagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---gaggggctcacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712504.1/1-7509 |Norovirus Hu/GII.4/NIHIC11.3/2013/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgca------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacggccacctactccagaactggtt-------aaaagtattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcctgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaataaagacgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttctacaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgtttac +cagacccataaaagatataatagggaagataagacctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgacttcgagctgcaaggacctgaggaccttgcagttga +gcttgtccccgtggtgatgggaggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcttccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaaattgat +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggacgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtacaccgagcgaaggaggagct +ttccagcagaccaagacccgtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtagctaagagaatcgcagcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaacccaattca +cgatgccctcaggctgcaagaactcgctgacacttgtcccctcactctaaattgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcaa +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggatacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcagatagtgtatagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaaattgacagaatccaaagcgccgccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaagagtgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggccttagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggcyattgccagggcgacygaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagrccaacaaggaaacaacgcaaggaggaaagagcctccctcggtctggtcacwggctctgaaa +tyaggaaaagaaayccagawgacttcaaacccaaagggaaattgtgggctgacgatgacaggaatgtrgact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctattcataacatcaacycatgtcataccccagggygcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcgggcgagttctgycgccttagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggycacrctactcatcaaa +aggtccactggggaactcatgcccctagcwgctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggtatgcttctgacaggttccaaygccaagagcatggacctgggtactacacca +ggtgattgtggctgyccctayatctacaagagrggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgcyacccaggggagtgarggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggyycagggagtgccccaacacttagcaccaaraccaaa +ttctggagatcrtccacagcrtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagctraagccattcacagagcccagrggc +aagccrccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaacgtccttgagcaaacaattgat +ccacctgagaartggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccargcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacyccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggytcggacttggcgaccatgatccggtgt +gctcgwgcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagtcacaaacctgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattaacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaaccgtgacccgcgacccagctggttggtttggaagactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctrctgggagaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtrgcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaamtttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggatcctgtgttgattcccttacccgatgttaggaacaatttctaccatta +yaatcaatcaaatgat---tctaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttyatattttt +ggtgccacccacagttgaatcaagaaccaaaccattctctgtcccarttttaactgttgaggagatgaccaa +ttcaagg---twccccattcctttggaaaagttgttcacgggccccagtagtgcctttgtcgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaaa----------- +-----------tttcaaa------------------------------------------------ca---- +-------ctcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------gcccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgaaa---------ctgacacaaa +caatgattt---tgatgccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggcggaaccacccaccaaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgctcccccaagaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcatag +accaggctatgtcacagtggcccacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctatcattgctggattggcatctgacgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacaattgattttgaaaataacagaaaattg +caacaagcttccttccagtttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tacccccgcccggggttcctct------------------ag +cacatctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtacgcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712505.1/1-7506 |Norovirus Hu/GII.4/NIHIC17.4/2012/USA, partial genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgwtgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgayaagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-rat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggyctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataycattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctccyagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgtyatttctgaagacttagat +ggyttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggycccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttaytgggagaggccgcactccacggcccaacattctacagtaaaatc +agyaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tcyaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgccactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gatscagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttytgtttgagtgtaagcttcataa +aycaggctatgttacagtggctcacactggtcaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgccccyatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctytcgttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcytagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggarcggg +acaaggtactgggctcccgatgctaggactacaacatayaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccgggrttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712506.1/1-7502 |Norovirus Hu/GII.4/NIHIC1.12/2012/USA, partial genome +---------tgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatgtagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtagggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttctcaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaaggaaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggaccgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga------ccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttggttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712507.1/1-7500 |Norovirus Hu/GII.4/NIHIC1.11/2012/USA, partial genome +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatt-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatgtagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaataactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtagggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttctcaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaagggaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggaccgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga------ccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggctcacaccggccaccatgatttggttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF712510.1/1-7509 |Norovirus Hu/GII.4/NIHIC2.2/2010/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggccaaaacaggcc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaagagatccc +acc-----------------------------tcccccgcccaacgg------ggaagatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaacaatacggccttcagtgtycctccactcaaccagagggagaatagggatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacamggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +tag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaaggtaaagcccctcaacatcctcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +actcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaarmgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacycttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagactcatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggggaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccctgaggtcgaaaaggcga +agcgcgatttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaatgggaacaccccacacgggaggggcgtcatgaagtctctca +ccactggctccctcattgcccgggcatcggggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaggtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaacgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaaratccggcaaa +ggatcttcagaccaacaaagaaacaacgcaaggaagaaagagcttctcttggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacttactgtggtgcaccaatcctaggcccagggaatgccccaagactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggcggcaaagacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgctagaagctgccaagaaaaccatcatcaatgttcttgaacagacaattgac +ccacctgagaagtggtcattcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtatgaagaaggaaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagatctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaarcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggaagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtaatggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatctctgaagacttagac +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaaggcccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaatgcgtttaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaagccatttactgtcccaatcctgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaarttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttrggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttggcaa------------------------------------------------tt---- +-------ctcgya----------------------------------gttacaca----------------- +----------------atgaatctggcctctctaaattggaacaattatgacccagcagaagaaattccagc +cccactgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggagagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggrgtgccgactttactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +yaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggaagatagtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtgcacctggcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccacyatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcttgtttgagtgyaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttagtcattccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagagggt +ggattctctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggga----------------gaatcaattctaggactyc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +tatatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +atctgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF306213.1/1-7578 |Norovirus Hu/GII.3/Jingzhou/2013402/CHN, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacggccacccaccccagaattgatc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagctcaccactgtcaggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccact +gaccggaacaatcctggaaatgtgggatggggagatctatcattatggtctgtatgtggagcgaggccttgt +gcttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactcgcaccactttctctattttg +gaggccagtgtacacaccac---agtatctcatctctccagacactcttaggaggctgcatggagagtcgtt +cccttacacagcctttgacaacaactgctatgccttctgttgttgggttcttgacctaaacgactcgtggtt +gtg---caggagaatgatccaaaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcctatcaaagatataataggaaaggtgagaccgctcaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtagaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatatggattggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggccatggtgaggtccattgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagtttggcaaccta +catgagaacccttgacctcgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctactggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctccagcaggccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcggcttcgcttacaggggaccagcgtgtgggcctcatccctcgcaatggcgt +tgatcactgggatgcatataagggtgaaagagtcgtcctatgggatgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctgaactgtgacaggattgagaacaa +gggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgagacgcattgacttcctcgtgtatgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaattgg +cgctggctccgcagggtggtttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctta +ccactggttccctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caactcccaccacctttaactttgaccgcaataaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaagcagctcaaggatgtcaagaccatgccagagctcaaacagg +cactcaagaatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttataggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagaccaacaatgaacttgccggcgccc +tacaccaccttaggtgtgccagaatcagatattatgtcaagtgtgtccaagaggccctgtattccatcatcc +aaattgctggagctgcatttgtgaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtagaggatacagagga--------aaccgtcagcaaggatgggtgcccaaaacccaag-- +-gat----gatgaag---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaggggaagaaca +aatctggccgtggtaagaagcacacggcattctcaagtaaaggtctcagtgatgaggagtacgatgagtaca +aaaggatcagggaagaaagaaatggaaaatattccatagaggaatacctccaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaggaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagaggacctccctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaaacctaaaggaaagctgtgggctgatgacgacaggagtgttgacc +acaatgagagactcaattttgaagccccgccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgtccccatcaaacagattcagatacacaaatcgggtgaattctgccgtttgaggtttccaaaaccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacattactcatcaaa +aggccaactggggaactcatgcccctggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgctaagagtatggacctaggcaccacacca +ggtgactgtggctgtccctacatttacaagaggggaaatgactacgtagtcattggagttcacacggctgcc +gcccgtggaggaaacactgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgat +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagactaaa +ttctggaggtcgtccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccctcattacaacaagttatgagggaccaactgaaaccattcactgagcccaggggc +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcgtcaacgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcacaagcttgcgcttcccttgacaagaccacttccagcggtcatccgcac +catatgcgaaaaaatgactgttggaacggggagtccttcacaggaaaattagcagaccaggcttccaaggct +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgggcattcggaggcctgatggaggaactcaaagcacactgtgtcacactacccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttggcagcagccttagaaatcatgg-tcaagttctccc +cagaaccgcacct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aagatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggtcacaaacctgtcccctgacatcattcaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaagttggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgaaggaccacttgtcatctctgaagacctgaat +ggtctaactttcctgcggaggaccgtgacccgcgacccagcgggctggtttggaaagttggaacagagttca +atacttagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacattcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcacttcacggcccagcattctatagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagaaccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctgccggcctcgtcccagagatcagcagtga +ggcaatggcgctagaaccagtggcgggtgcagcgatagcagcacccctcactggtcagcagaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatctcctagaaattcccctgg +tgaagttcttctcaatttggaattgggtccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtggatttgaagtacaggtggtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctattccccctaattttccaattgataatctaagtgcagcacagatcacaatgtgtccacatgt +gattgtggatgtcaggcagctggaaccagtcaacctcccgatgcctgacgtccgcaataacttcttccatta +caatcaagggtctgat---tcgagattgcgcctaattgcaatgctatatacacctcttagggcaaataattc +tggggacgatgtttttactgtgtcttgcagagtgctaactagacctagccctgacttctcatttaattttct +tgtgccacccactgtggagtcaaagacaaaacccttttccctccctattctgactatctccgaaatgtccaa +ttctagg---ttcccagtaccaattgattctttgcacaccagccctactgagaacattgttgtccagtgtca +gaatgggcgagtcacccttgatggtgagttgatgggcaccacccaactcttacctagccaaatctgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggctgatacagcaacccctagattgttta---- +-------attatt----------------------------------attggcat----------------- +----------------atacaattggataacctaaatggaactccttatgaccctgcagaagatataccagc +ccccctagggacaccagatttccggggtaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ctgacgccacgact--------agg-----------gcacatgaagcaaagat +agacacaacatctggccgcttcaccccaaaactaggttcactagagatttcc------------actgagtc +tggagattt---tgaccaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------tgagccagattttcaacaatgggctcttcccga +ctatgcaggccag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttgccat------cttctggtgggcgg-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggtgcagcatttctaccaagaatcagccccctccca +aactcaagtggccctagttaggtatgtcaaccctgacactggtagagtgttatttgaggccaagttgcacaa +attacgtttcatgactatagccaagagtggtgactccccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattggctggtgatatgctcacaaatactgta +ggatctttagttaatgcagg---ggctaatgccattaatcaaacaattgattttgaaaataataaatat--- +------------------------------ttgcaaaatgcctcttttaatcatgataaggagatgttgagt +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaagcaaggggttttgaccgctggc +ggcttctcccctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgagatactgggcaccaggtgccacctccacaacctcgatgtcgggtggcttcacg-aatca--------- +aa-------------ctgcgcacagacccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaacccacccccaacagtgggtcctcagtgaggtca +aattcaacccaaattac--cagcctgagttcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgtcagctcaatac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggttaaccaaca +aaattttaatttggaaccacacatgc---ctggatctcttagaacagcttttgtcactccaccatctagtac +agcctct---agct------------------------------caggca---cagtctcaactgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaaggtta-------- +-------ttt-taa--------------------attt-g--------gt-ttaagattggatttaa-ttt- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaa-- +------------------------------------------------------------------------ +- +>KF306214.1/1-7605 |Norovirus Hu/GII.4/Jingzhou/2013403/CHN, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +ata---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagcgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagttatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtgttagacctaaatgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gactttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactgactatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaagactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctggtggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtatacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagaaagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgatcctagaagaaggcgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagcttatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacaccgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaaa +ttttggagatcatccacaacaccgctcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggacgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatacagatatcactatgatgctgattat +t-cccggtgggattcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacggactgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcagatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttttatcacta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgactttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggagctccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagttaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcagg-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaatggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------ttcttt +a-gt----------------gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaaaa +a---------aaaaaaaaaaaa-------------------------------------------------- +- +>KC464496.1/1-7519 |Norovirus Hu/GII.12/CGMH38/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaactcgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaaattaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactgattacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatatatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagacctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagagggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcacaaatga +gaccatggcacttgaaccggtggctagggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattacattaaactttgggcaagctcccactggacatcttaccctttcacccccctattcgcctgg +ggaagtcctactaaacttggaattacgccctgaactaaatccatatttggctaacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttaaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaaatcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaatcgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC464497.1/1-7505 |Norovirus Hu/GII.12/CGMH39/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaaaaggaaaaagctaggaaactctccaccgaatccgcttctcgtgatattgg +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgattatggaatgagtaaccccattca +tgacgcccttaggctacaagaactcgttgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatggacttcattgtgtacgatgatgcccccgacgctgaaaaggcaa +aacgagacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaaattaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tgcaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactgattacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatatatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagacctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagagggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgcagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacctca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaaatcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------ga----- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC464498.1/1-7522 |Norovirus Hu/GII.12/CGMH40/2010/TW, complete genome +--------atgaagatggccgcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggaattaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaattaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtggtggaatccctaattctccttgcagaactcttc---ggagttttctggacgccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttcccctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtgatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaatcaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagccgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaagcccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgcagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacctca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggtgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaga +aaatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgacatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctagtccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC464499.1/1-7514 |Norovirus Hu/GII.12/CGMH41/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagacctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaactcgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaaattaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactgattacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatatatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagacctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagagggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttcttccacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttaaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaaatcaccaacattaacggaaccccttttggtccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttctacagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcagatt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcatcaacacactctatcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-t-------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC464500.1/1-7519 |Norovirus Hu/GII.12/CGMH42/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagagatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacgggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagcaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggccttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaagaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagcccttaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaattcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccattatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagaaccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggtcccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctcttgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KF429760.1/1-7506 |Norovirus Hu/GII.4/NIHIC28.4/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---ggatggcgtttccggcttgcctgatctttccaccgtcagacaacc +ggaagaatccaacacggccttcagtgtccctccactcagtcagagggagaacagagacgctaaggagccact +gactggaactattctggaaatgtgggatggagagatctatcattatggtctgtatgtggagcgaggtctcat +attaggtgtgcacaaaccaccagccgccattagcctcgccagaatagaactaacaccactctccttgttctg +gaggcctgtgtatactcctc---agtacctcatctctccagatactctcaggaaattgcacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatactcctgtgtgcactgtcttcgctattcac +caggcccataaaagatttaatagggaagctaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttgggagaactcttt---gatattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcaaccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatagtgagatccattgaggacgcagt +tctggatctcgaggcaattgagaacaaccatatgaccaccttgctcaaagacaaagacagtctggcagtcta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgcagcacgctctctggtgcaccgagcaaaggaggagct +ctccagcagaccaagacctgtggtgatgatgttgtcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaacggcgt +cgaccactgggattcgtacaggggggagaggatcgtcctttgggacgactatggaatgagcaatcccatcca +cgatgccctcagactgcaagaactcgctgacacctgccccctcaccctaaattgtgataggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcaccactaacctggctaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgcgacttcccaggccaacccgacatgtggaagaacgccttcagctctgacttctcacacataaaactga +cactggctccacagggtggcttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccattggctcccttattgccagggcatcagggctactccatgagaggctagatgaatttgaattacagggcc +caaccctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgcagaaaacaaat +atgggttaatggaaacaatgaaagtcgggagacagctcaaggacgtcaggacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccaaatagtatacaatggtagtacctacacacttgagtccgatg +gcaagggcagtgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaatgagctggctggcgcac +tgcaccatctaagaagcgccagaataagatactatgttaagtgtgtccaggaggccctgtattccataatcc +agattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagagcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcttctctcggcctagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagcccccccaagcatctggtcgaggatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggaattcttt +ggggtctctgtcaagcaaattcaggtacataaatcaggtgaattttgccgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactacttattaaa +agatccactggtgaactcatgcccctagcagccaggatgggaacccatgcaaccatgaaaattcaagggcgc +actgtcgggggtcaaatgggcatgcttctgacaggatccaacgccaaaagtatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggttataggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagctacactcgagggtggtgac +aataaaggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaagctcagtactaagaccaaa +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagctgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcatttgcacaagcttgcgcgtcccttgacaaaaccacttccagtggccatccacac +cacatgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcggaccaagcttccaaggcc +aacctgatgtttgaagaagggaaaagcatgaccccaatctacacagctgcacttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgattcgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtatacataccactatgatgctgattac +t-ctcgatgggattctacacaacagaggggcgtgttggcagcagctctagagatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaggacctcctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggccttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttctatggtgatgatgaaattgtcagcacagatataaaattggacccggaaaaattgacagcaaagctc +agggaatatgggctgaagccaacacgccctgacaaaaccgaaggaccccttgtcatctctgaagacttggat +ggcctgaccttcctgcggaggactgtgacccgcgacccagcaggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcacttcatggcccagcattttacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctaccccatctga---tgggtcctcggccaacctcgtcccagaggtcaacaatga +ggttatggctttagaacccgttgctggcgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgtccttgggccctgatttgaacccctacctttcccacttgtctagaatgtataa +tggttatgcaggtagttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagtcccaccaaatttccgaactgaaggcttgagccccagccagatcaccatgttcccccacat +aataacagatgttagacaattggaacctgtgttgatccccttgcctgatattaggaataatttctaccatta +taatcaatcaaatgac---cccactattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgttttcacagtctcttgccgagttctcacaaggccatcccccgattttgatttcatatttct +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcctaactgttgaggagatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggccctagcagtgcctttgttgttcagccaca +aaatggtagatgcacgaccgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccgca----------- +-----------ttggaaa------------------------------------------------tt---- +-------ctcgcg----------------------------------agtacaga----------------- +----------------atgaacctggcctccctaaattggaacaattatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgcaggtaagatccaaggtgtgctcacccaga------------------- +-----cc-----acaaggcatgatggctcgacc--------cgc-----------ggtcacaaagccacggt +gtacactggaagtgccggattcaccccaaagctaggcagtgttcaattctcca---------ctgacacaga +caatgacct---tgaggccaaccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcatccaggacggcaacgc---ccaccaaggagaacctcagcaatgggtgctcccaaa +ctatgcaggcaga-gatggt------cacaatgtacacctagcccctgccgtggcccccactttcccgggtg +agcaacttctcttctttaggtccaccatgcccg------ggtgtagcgggta------tccca--------- +--atatgaatttggactgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atccgatgtggcattacttagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctacgtgacagtggctcacactggcccacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtagg---------cg +tgcat---------tataatggctggagctatcattgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagtcgattttgaaaataataaacaactg +caacaaaactccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgggaatcaaacaggcagtactcctaaagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggctcccaatgctagcaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------gccctcgggggcgtt---------------------------------g +ccaggaa----------------gaactaatctcaggactgc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtct-----attcaaatca------aactgtttcaac----------gag--------ac +ttggtac--------ttcagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---gaggggctcacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429762.1/1-7481 |Norovirus Hu/GII.4/NIHIC17.7/2012/USA, partial genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcgaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctaccattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctagatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactgttcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgctggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgttgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaggagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagcacctccgttcagaccaacaacgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgaagagtaca +agagagttagagaggaaagaaatggcaagtactccatagaggagtatcttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggctaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttattgggagaggccgcactccacggcccagcattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagcatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acat-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429766.1/1-7509 |Norovirus Hu/GII.4/NIHIC13/2011/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaagtgttcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacagttctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagacataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctagaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgaggacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaataggaaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagagctcgctgacacttgccccctcactttgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgtaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggcgccc +tgtaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagctctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagatctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagagagaaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactaatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggcggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagctttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccacta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagctacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaattaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactgttaagatttgtgaacccagatacaggtagggtcttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagtcgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacatagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagctaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcaca---------------------------------a +ccaggaa----------------gggctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagccttccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429768.1/1-7503 |Norovirus Hu/GII.4/NIHIC1.13/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatgtagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggc +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggatgactatggaatgagcaatcccatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctgaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgcgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgatatgtggaagaacgccttcagtcctgatttcacacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgaccgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggacagccagaatgagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaaaccacaagtggaaaacacagagga--------gactaccagcagggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtagggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggtaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatagcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaagtactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttctcaactgaaggcttgagccccagccaggtcactatgttcccccactt +aatagtagatgttaggcaactggaacctgtgatgatccccttacccgatattaggaataatttctatcatta +caatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgt +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaaccaacccattctctgttccaattctaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ctacaaa------------------------------------------------aa---- +-------ctcata----------------------------------cctaccaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaaccccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaagggaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggaccgtcgagttcactccaaaactgggtagaatccaacttttca---------ctgacacaga +caacgatct---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga------ccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggtaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagcttcataa +atcaggttatgtcacagtggcccacaccggccaccatgatttggttatcccccctaatggttatttcagatt +tgattcctgggtcagccccttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggctacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgt------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agtatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccaggctggcgttt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429769.1/1-6156 |Norovirus Hu/GII.2/SnowMountRS/1975/USA, partial genome +--------atgaagat---ggcgtctaat-gacgcttccgctgccgctgctgtc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cctccaaggccacccaccccagaactggtg-------aaaaagatccc +acc-----------------------------tcctccgcccaacgg------ggaggacgaaccggtcgtt +cactatagtg----------ctaa---agatggtataactgggctgcccgaacttacaacagtgaggcaacc +agaagaggccgctacagcattcagcgtcccacccctcgaccagagagagaacagggacgctaaagaaccatt +gaccggcaccgtcttggagatgtgggatggcgagatctaccattatggcctatatgtggagcgagggctggt +gctaggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gagaccagtgtacacccccc---agtacctcatcgctcctgacaccctcaggaagctgcacggggagtcatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttggacctaaacgattcttggtt +gag---cagaaggatgatacaaagaacaactggctttttcagaccttaccaggattggaataggaagcccct +ccccaccatggatgactccaagttgaagaaggtggccaacatacttttgtgtgccttgtcatcactattcac +tagacccatcaaggacataatcgggaaactcaggcctctcaacattcttaacatcctggcttcttgtgattg +gactttcgcaggtatagtggagtctctaattctcctagctgaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacccgaagaccttgctgtgga +acttgtaccgatagtaatgggggggataggattggtgttggggttcaccaaggaaaggattgggaagatgct +atcatctgctgcttccaccctgagggcctgcaaagacctcggcgcttatgggctggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaagaggcaaacgagcttgcgatggtgagggctattgaggatgcagt +cctagatctcgaggctattgagaacaaccatatgacagctctactcaaagacaaagatagcctcgcaacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccaccaagtccgcttcacctgatatagt +gggcacgatcaacgccctgctggctagaatcgccgctgctcgttcccttgtacacagggccaaggaagaact +gtccagcaggctaaggccagttgttgtgatgatatctggcaaaccaggtatcgggaagacccatctggctag +agaattggcaaagaagatcgctacaaccctctcaggagaccagagggtaggcctcatcccccgcaacggagt +tgatcactgggatgcttacaagggtgagagagtcgttctctgggacgattatgggatgagtaaccctgtcca +tgatgccctaagactccaagaacttgctgacacctgccccttgaccctaaactgtgacagaattgagaacaa +gggcaaggtctttgacagtgatgccataatcatcacaaccaacctggccaacccagctccacttgattatgt +caactttgaagcttg-ctccaggcgcattgacttccttgtgtatgccgatgcacctgacgttgagaaagcaa +agcgcgacttcccgggacaacctgacatgtggaagagcgcttacagttccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacggaaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaaagattggatgagttcgagctacagggac +ccaaccttacaactttcaacttcgaccgtaataaaatacaggctttcaggcagcttgccgctgaaaacaaat +atggcctggtggacacaatgagagtgggtggacaactcaagggtgtcagaactatgccagaacttaagcagg +ccctcaagaacatatcaatcaggaggtgccagatagtgtatggtggcagcacctatacacttgaatctgatg +gcaaagggaatgtgaaagtggaaaaagtacaaaataccaacgtccaaatcaacaacgagctaactggtgctt +tacaccatctccggtgcgctaggatcaggtactatgttaaatgtgttcaggaggctctttattccatcatcc +agattgctggggccgcttttgtaaccacgcgcattgtgaagcgcatga------acatacaaaacttgtggt +caaggccaccagtaggagatgcggagga--------ggttgctagccaggatggttgcccaaagcccaaa-- +-gat----gatgagg---agttcgtcatctcgtctagtgacatcacacctgaaggcaagaaaggaaagaaca +agactggccgcggcaagaaacacacagccttctcgagcaagggtctcagtgatgaggaatatgatgagtaca +aaagaatcagggaagaaaggaatggcaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaagaagtggccatagccagagcaactgaggaagacttctgtgaggaagaagaagccaagatccgacaga +ggatatttaggccaacgagaaagcaacgcaaggaggagagggcttcccttggccttgtcactggctcagaga +tcaggaagagaaacccagacgacttcaaacccaaaggaaagctgtgggctgatgatgaaagggtcgtcgact +ataacgagaaactcagttttgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttctgggtgtccc-ccagtctgtttattacatcaacccatgtcataccccaaggcactcaggaattcttt +ggtgtacccgtcaagcagattcaaattcacaaatcaggggagttctgccgcctgagattccctaaatcaatc +agaactgatgtgacaggcatgattctagaagagggggccccagaaggaaccgtggtctcattactcatcaag +agaccaaccggtgagctcatgcctctggcagccagaatgggcacccatgcgactatgaggatccaaggtcgc +acggttggaggccagatgggtatgttgctaacagggtccaatgctaagagcatggatttgggtacaacacct +ggtgactgtggctgcccctacatttacaagagaggcaatgactacgtagtcatcggcgtgcacacagccgct +gctcgcggaggtaacactgtcatctgtgcaacccagggtagtgaaggtgaggccacgctcgagggcggtgat +aacaaaggcacctactgtggagctccaatactaggccctggtaacgcacccaagctcagcaccaagaccaaa +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcctacttaggtggtaaggacccc +agggtgaagggtgggccttcactgcaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagccgccaagaagaccatcatcaatgtgttggagcaaacaatagat +cccccccaaaaatggtcattttcacaagcatgcgcgtcgcttgataaaaccacctccagcggccacccccac +cacatacggaagaacgattgctggaatggggagtctttcacaggaaaattggcagatcaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtctacacaggggctctcaaggatgaactggtcaag +actgacaagatctatggacagatcaagaaaaggcttctttggggctcggacttggcaacaatgatccgttgt +gcacgggcgtttggagggttgatggatgagcttaaggcccattgtgtaacacttcctgtcagggttgggatg +aacatgaatgaggatggacccataatttttgaaaagcactccaggttctcataccactatgatgcagactac +t-cacgctgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-ttaaattctcac +cagaaccacactt-ggcccaaattgttgcagaggacctcctagcccccagtgtgatggatgtaggtgatttc +aaaataacaattaatgagggtctgccctcgggagtaccctgcacatcgcagtggaattccatcgcccactgg +cttctcacactctgtgcactatctgaagtcacaaacctggctcctgacatcatacaagctaactccttgttc +tctttctatggtgatgatgaaattgtaagcactgacataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaaaccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggcttgacctttctgcggaggaccgtaacccgcgatccagctgggtggtttggcaagttagaccagagttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +cagaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccagcattttacaccaaaatc +agtaaattggtcatcacagagctgaaggaaggtggcatggatttttacgtgcccaggcaggaacccatgttc +aggtggatgagattctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggtcatggctcttgagcccgtggctggcgctgccttagcggctccagtcactggccaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcactgtttccccacgcaatgcccctgg +tgaagtgctattgaatctagaactgggtccagaactgaacccttatctggcacacttggcaaggatgtacaa +cgggtatgccggtggaatggaggtgcaggtcatgctagctgggaatgcgtttacggc---tggaaagttggt +cttcgccgctgttccacctcatttcccggttgaaaaccttagcccgcagcaaattaccatgtttccccatgt +gattatagatgttaggactttagaacctgttttactaccacttcctgatgttaggaataacttcttccacta +taaccagaaagatgac---cctaagatgagaattgtggccatgctttacactccccttagatcgaatggttc +tggtgatgatgtattcacggtctcttgtagagtgttgactaggccttcccctgattttgatttcacatacct +agtgccaccaacagtggagtctaaaacaaaaccattcactatcccaatcctcacactcggggagctttccaa +ttctaga---tttccagtgtccatagatcagatgttcactagccccaatgaagtcatatctgtgcagtgtca +gaatggaaggtgtacattagacggggagcttcaaggaacaacacaactccaagtcagtggtatctgtgcatt +tagag-----------------------------------------gagaagtgactgcccac--------- +-----------ttgcatga--------------------------------------------taatg---- +-------accatc----------------------------------tttataat----------------- +----------------gtcaccatcacaaatttaaacgggtctccttttgacccctctgaggacatccctgc +tcccctgggtgtgcccgactttcaagggagggtttttggtgtcattagccaga---gagacaa--------- +-----cc-----acaatgccagtggacataacc--------agcctgcaaacaggggacacgatgctgtggt +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429776.1/1-7509 |Norovirus Hu/GII.4/NIHIC17.1/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +accaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtcctcggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429777.1/1-7509 |Norovirus Hu/GII.4/NIHIC27.1/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccccaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacacactcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcggtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttactcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaatgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaacttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttaaggtgtgccagaataagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagtaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaagaaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctccctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacactccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtattggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacaatt-ggctcaggtagttgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacaacaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccacggagacccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagcttaaagaaggtggtatggatttttacgtgcccagacaagagcctatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaatcat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaagttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccactcagagccaataatgc +cggggatgatgtcttcacggtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggagcaattacgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------gattcaccccag- +--------tcggtgtcattcaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccaggtg +aacagctccttttcttcaggtccactatgcccg------gatgtagcggata------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttttaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacatgatttggtcattccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaggattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagtagtaatctacaacaagcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctactaaaaagttgcaacaggaactgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttctacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tatccccgcccggggctcccca------------------ag +catatctt-----------ccaat------------gtttctactgctaatt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccgatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429778.1/1-7509 |Norovirus Hu/GII.4/NIHIC18.1/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcttttgacaacaactgttatgccttttgttgctgggttctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtaaggtccatcgaggatgcagt +cctggatctagaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagcctggcaaccta +catgaggacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaataggaaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactttgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcataatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgatgtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataagt +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggcgccc +tgcatcacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagctctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aggctggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagagagaaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtcactctcggtttggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggagctcatgcccctagcagctagaatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +tactggagatcgtccactgcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagctttttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccacta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgacttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagctacgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccggcaca +atctgatgtggcactgttaagatttgtgaacccagacacaggtagggtcttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagtcgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaatcgaggccaccaaaaagttgcaacaggaaatgatgagagctaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcgatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------gccctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aactacctcaac----------gag--------ac +ttggttc--------tacagccggttctggtaccagtgtctcgagccttccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429779.1/1-7506 |UNVERIFIED: Norovirus Hu/GII.4/NIHIC28.1/2012/USA genomic sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctggtc-------aaaaacattcc +ccc-----------------------------tcccccrcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tyaa---ggatggtgtttccggcttgcctgatctttccaccgtcagacaacc +ggaagaatccaacacggccttcagtgtccctccactcagtcagagggagaacagagatgctaaggagccact +gactggaactattctggaaatgtgggatggagaaatctatcattatggtctgtatgtggagcgaggtctcat +attaggtgtgcacaaaccaccagccgccattagcctcgcyagartagaactaacaccactctccttgttctg +gaggcctgtgtatactcctc---agtacctcatctctccagatactctcaggaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactatggatgactccaarttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcccataaaagatttaatagggaagctaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttygcaggcatagtggaatccttgatactcttgggagaactcttt---gggattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgagctggctatagtgagatccattgaggacgcagt +tctggatctcgaggcaattgagaacaaccatatgaccaccttgctcaaagacaaagacagtctggcagtcta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcytcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgcagcacgctctctggtgcaccgagcaaaggaggagct +ctccagcagaccaagacctgtagtgwtgatgttgtcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaacggcgt +cgaccactgggattcgtacaggggggagaggatcgtcctttgggacgactatggaatgagcaatcccatcca +cgatgccctcagactgcaagaactcgctgacacctgccccctcaccctaaactgtgataggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcaccactaacctggctaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgcgacttcccaggccaacccgacatgtggaagaacgccttcagctctgacttctcacacataaaactga +cactggctccacagggtggcttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccattggctcccttattgccagggcatcagggctactccatgagaggctagatgaatttgaattacagggcc +caaccctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgcagaaaacaaat +atgggttaatggaaacaatgaaagttgggagacagctcaaggacgtcaggacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccaaatagtatacaatggtagtacctacacacttgagtccgatg +gcaagggcagtgtgaaagttgacagagttcagagtgcctccgtgcagaccaacaatgagctggctggcgcac +tgcaccatctaagaagcgccagaataagatactatgttaagtgtgtccaggaggccctgtattccataatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagagcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcttctctcggyctagtcacaggttctgaga +ttaggaaaagaaacccagatgayttcaagcccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccmccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggaattcttt +ggggtctctgtcaagcaaattcaggtacataaatcaggtgaattttgccgcttgagrttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactacttattaaa +agrtccactggtgaactcatgcccctagcagccaggatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagtatggacctgggtaccacacca +ggtgattgtggctgyccctacatctacaagagaggaaatgactatgtggttatwggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagctacactcgagggtggtgac +aataaaggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaagctcagtactaagaccaaa +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcactgcarcaagtcatgagggatcagytgaagccatttacagagcccagaggc +aarccaccaaagccaagcgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcatttgcacaagcttgcgcgtcccttgacaaraccacttccagtggccatccacac +cacatgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcggaccaagcttccaaggcc +aacctgatgtttgaagaagggaaaagcatgaccccagtctacacagctgcacttaaggatgaattagttaar +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgattcgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaarcattccaggtayacataccactatgatgctgattac +t-ctcgatgggattcwacacaacagaggggcgtgttggcagcagctctagagatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaggacctcctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagttacaaayttgtctcctgacacyatacaggctaattccctcttc +tctttctatggtgatgatgaaattgtcagcacagatataaaattggacccagaaaaattgacagcaaagctc +agggaatatgggctgaagccaacacgccctgacaaaacygaaggaccccttgtcatctctgaagacttggat +ggcctgaccttcctgcggaggactgtgacccgcgacccagcaggttggtttgggaaaytggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcacttcatggcccagcattttacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgcyaccccatctga---tgggtcctcggccaacctcgtcccagaggtcaacaatga +ggttatggctttagaacccgttgctggcgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaacccctacctttcccacttgtctagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagtcccaccaaatttccgaactgaaggcttgagccccagccagatcacyatgttcccccacat +gataatagatgttagacaattggaacctgtgttgatccccttgcctgatattaggaacaatttctaccatta +yaatcaatcaaatgac---cccacyattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgttttcacagtctcttgccgagttctcacaaggccatcccccgattttgatttcatatttct +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcctaactgttgaggagatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggccctagcagtgcctttgttgttcagccaca +aaatggtagatgcacgactgatggcgtgctcttaggtaccacccaaytgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccgca----------- +-----------ttggaaa------------------------------------------------tt---- +-------ctcgcg----------------------------------agtacaga----------------- +----------------atgaacctggcctcccwaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaaccccagattttgcaggtaagatccaaggtgtgctcacccaga------------------- +-----cc-----acaaggcatgatggctcgacc--------cgc-----------ggtcacaaagccacggt +gtacactggaagtgccggattcaccccaaagctaggcagtgttcaattctcca---------ctgacacaga +aaatgacct---tgaggccaaccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcatccaggacggcaacgc---ccaccaaggagaacctcagcaatgggtgctcccaaa +ctatgcaggcaga-gatggt------cacaatgtacacctagcccctgccgtggcccccactttcccgggtg +agcaacttcttttctttaggtccaccatgcccg------ggtgtagcgggta------tccca--------- +--atatgaatttggactgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atccgatgtggcattacttagatttgtgaatccagayacaggtagggttttgtttgagtgcaaacttcataa +atcaggctacgtgacagtggctcacactggcccacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtagg---------cg +tgcat---------tataatggctggagctttcattgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataataaacaactg +caacaagactccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgggaatcaaacaggcagtactcctaaagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggctcccaatgctagcaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------gccctcaggggcgtt---------------------------------g +ccaggaa----------------gaactaatctcaggactgc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtct-----attcaaatca------aactgtttcaac----------gag--------ac +ttggtac--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---gaggggctcacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429780.1/1-7450 |UNVERIFIED: Norovirus Hu/GII.4/NIHIC8.5/2012/USA genomic sequence +------------------------------------------------------------------------ +---------------------cgcaaaatcttcaagtgaca---------------gagtgctttctagcat +ggctgacactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggacacaccacag +aaa---------------------cccccacgaccacccacyccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagyg----------ccaa---aggtggcgtcaccggtttacccgagctctccaccgtccggcaacc +ggaagaaaccaacacggccttcagygtccccccactcaaccagagggaaaacagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggggagatctaccattacggcctatacgtggagcgaggccttgt +acttggcgtgcataaaccaccagccgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctyaagaaattacatggagagtcgtt +cccctacacagcctttgacaacaattgctatgccttctgctgctgggtcytggacctaaacgactcatggct +gag---taggagaatgattcagaggacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaaataaagaaggtagctaacatattcctgtgtgcactatcttcgctgttcac +caggcccataaaagatataatagggaaaataaarcctctcaacatcctcaatattttggcctcatgtgactg +gactttcgcgggcatagtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgactacgagttgcaaggacccgaggaccttgcggtgga +acttgttcctgtggtaatggggggaattggtttggtgttgggattcaccaaagaaaagattggaaaaatgtt +gtcatctgctgcatccaccctaagggcttgcaaagatcttggtgcatatgggctggaaatcytaaaactggt +tatgaagtggttctttccaaagaaagaggaagcaaatgaattggccatggtgagagccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgactgccttgctcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaggagaaggccaggaarctctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgctgccgcacgttccctggtacaccgagcaaaggaggaact +ttccagcagaccaagacctgttgtcctaatgatgtcaggcaaaccaggaataggaaagacccatcttgctag +ggaggtagccaagagaatcgcggcctcccttacaggagaccagcgtgtgggcctcatcccacgcaacgccgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggatgactacgggatgagcaatcccatcca +cgatgccctcaagttgcaggaactagctgacacttgtcccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccggcaccactggactatgt +caactttgaggcatg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +aacgtgactttccaggccaacctgacatgtggaagaacgctttccattctgatttctcccacataaaattaa +cactggctccacagggtggtttcgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ctgttggctccctcattgcccgggcatcagggctacttcatgagagactagatgagtttgaactacagggcc +cagctcccaccaccttcaactttgatcgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acggattgatggacacgatgaaagttgggaggcagctcaaggatgttagaaccatgccagaactcaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgtacggtggctgcacctacgcacttgagtctgatg +gcaagggcaatgtgaaagttgacaaagttcagagtgcctctgtgcagaccaacaatgagctggccggcgccc +tacaccatctaaaatgcgccagaattagatactatrttaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagatacagggga--------ggccaccaacaaggatgggtgcccaagacccaaa-- +-gat----gatgagg---agctcgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agacaggccgcggcaagaarcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagatgaaagaaacggcaaatactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggattttcaggccaacarggaaacaacgcaaagaggaaagggcctctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaagggaaaactgtgggctgatgatgacagaagtgtggact +acaacgagaagctcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctctc-ccagtttgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaagcaaattcagatacacaaatcaggcgaattttgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacgggtatgatcctggaagaaggcgcgcctgaaggcaccgtggccaccctactcatcaag +agacctactggagaactcatgcccctagcagccagaatgggcacccatgcaaccatgaaaattcaaggacgc +accgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactttgtggttattggggtccacacagccgcc +gcccgcgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggccacacttgaaggtggtgac +aataagggaacatactgtggtgcaccaattctaggcccagggagcgccccaaagctcagcgccaagaccaaa +ttctggagatcatccacaacgccactcccacctggcacctacgaaccagcctaccttggcggcaaggatccc +agagtcaagggcggcccttcactgcaacaggttatgagggatcagttgaaaccattcacagagcccagaggc +aaaccaccaaaaccaagtgtattggaagctgccaagaaaaccatcattaatgttcttgaacagacaattgac +ccacccgagaaatggtcattcgcgcaagcctgcgcgtcccttgacaagaccacttccagcggccatccgcac +cacatgcggaaaaacgactgttggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagctagttaaa +actgacaaaatctatggcaagatcaagaagaggcttctctggggctcggacctagcgaccatgatccggtgc +gcccgagcattcggaggcttgatggatgaactcaaagcacactgtgtcacactccctrtcagggttggtatg +aacatgaatgaggatggccccatcatctttgagagacattccagatacaaataccactatgatgctgactac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagccctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtgatggatgtaggcgacttc +acaataacaatcaatgagggtctcccctctggggtgccctgcacctcacaatggaattctattgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatttgtcccctgacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatttctgaagatttgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atacttaggcagatgtactggactagaggacctaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaaactggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccarcccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgctggtgccgctattgcggcacctgtrgcgggycaacaaaatgtaattga +cccctggattagaaataattttgtrcaagcccctggtggagagttcacagtgtcccctagaaatgctccrgg +tgaaatwctrtggagygcggccttgggcccygacttaaacccctayctytctcatttggcyagaatgtacaa +tggttatgcaggtggytttgargtgcargtaatcctygcrgggaaygcgttcaccgc---sgggaaratcat +atttgcagcagtyccaccaaattttccaactgaaggyttgagtccyagccaggtcactatgttcccccatgt +agtagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +yaatcaatcaaatgaa---tctactattaaattgatagcaatgctgtacacaccacttagggcyaataatgc +yggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtaccacccacaattgaatcaagaactaaaccattcaccgtcccagtcttaacagttgaggaaatgaccaa +ctcaaga---ttccctattcccctggaaaaattgttcactggtcccagcaatgcyattgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttgggcactacccagctgtctgctgtyaacatctgcacctt +cagag-----------------------------------------ggaatgtcacccaac----------- +-----------gtggcaa------------------------------------------------ca---- +-------sccatg----------------------------------agtacaca----------------- +----------------atgaatttggyctcccaaaattggaacarttatgacccaacagaagacatcccagc +ccccctggggaccccagatttcgtgggaaggatccggggcgtgctcacccaga------------------- +-----cc-----acaaagcacgatggctcgacc--------cgc-----------gcccacatggccacagt +gagcactgggagtgctgacttcaccccaaagctgggcagcgttcaattcgaca---------ctgacacaaa +caacgattt---ggaawctcaccaaaacacga---------------------------agttcaccccag- +--------tcggcgtcacccatgatggtatcaacgcacaccaaagtgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-tctggc------cacaatgtgcatctagcccctgccgttgctcccactttcccgggtg +agcaactcctcttctttaggtccaccatgcccg------gatgtagcgggta------cccca--------- +--acttgaatatggattgcctactcccccaggartggatacagcacttctaccaagaagcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacaccggcagggttctgtttgagtgcaaactccataa +atcagggtatctcacagtggcccacactggttcatatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgtac---------cataatggctggagctctctttgctggattggcttctgatgtccttagctctggactt +ggttccctaatcaacgctgg---ggccggggtcatcaatcaaaaagttgactttgaaaataacagaaaattg +caacaggactctttccaatttagtagtaatctgcaacaggcttcctttcaacatgataaggagatgctccaa +gcacaaattgaggctaccaagagactgcaacagggcatgatacagatcaaacaggcagcgctccgagagggt +ggattttctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaagactctggactggaatgga +acaaggtactgggctcctgatgccaggaccaccacatacaacgcaggcagcttttccacccct--------- +ca---------------------gccttcgggagcatc---------------------------------a +tcaagaa----------------gaaataatgttagggcttc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tgtgcttt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgc-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggaaccagtgtctcgagtcgcccgt------------------c +atctgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---aggggkctctcaacacatcatttgtcaccccaccatctagtag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429782.1/1-7466 |Norovirus Hu/GII.4/NIHIC1.3/2010/USA, partial genome +-------------------------------------------------------------------atagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgacatagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaaacagtctggcagccta +catgaaaaccctcgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +agatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagtcctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagtccaaagcgcctccatgcagaccaacaatgagctggctggcgccc +tacaccatctaaagtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggaagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgaggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttcg +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgttccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctttgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccactatcaaattgatagcaatgttgtatacacctcttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------ctcata----------------------------------actacgca----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggagcgccgaatttgctccaaaactgggtagagtccaatttgcca---------ctgacacaga +cagtgattt---tgatactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtaatactgcccaccaaaatgaaccccaacaatgggtactcccaag +ttactcaggcaga-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgtcacagtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccactcct--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agcatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaggcaaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429784.1/1-7509 |UNVERIFIED: Norovirus Hu/GII.4/NIHIC8.4/2012/USA genomic sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----accgacaccgcaaaatcttcaagtgaca---------------gagtgctttctagcat +ggctgacactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggacacaccacag +aaa---------------------cccccacgaccacccacyccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagcg----------ccaa---aggtggcgtcaccggtttacccgagctctccaccgtccggcaacc +ggaagaaaccaacacggccttcagygtccccccactcaaccagagggaaaacagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggggagatctaccattacggcctatacgtggagcgaggccttgt +acttggcgtgcayaaaccaccagccgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctyaagaaattacatggagagtcgtt +cccctacacagcctttgacaacaattgctatgccttctgctgctgggtcytggacctaaacgactcatggct +gag---taggagaatgattcagaggacaactggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaaataaagaaggtagctaacatattcctgtgtgcactatcttcgctgttcac +caggcccataaaagatataatagggaaaataaaacctctcaacatcctcaatattttggcctcatgtgactg +gactttcgcgggcatagtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgactacgagttgcaaggacccgaggaccttgcggtgga +acttgttcctgtggtaatggggggaattggtttggtgttgggattcaccaaagaaaagattggaaaaatgtt +gtcatctgctgcatccaccctaagggcttgcaaagaycttggtgcatatgggctggaaatcttaaaactggt +tatgaagtggttctttccaaagaaagaggaagcaaatgaattggccatggtgagagccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccacatgactgccttgctcaaagacaaagacagcttggcaaccta +catgaggacccttgaccttgaggaggagaaggccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgctgccgcacgttccctggtacaccgagcaaaggaggaact +ttccagcagaccaagacctgttgtcctaatgatgtcaggcaaaccaggaataggaaagacccatcttgctag +ggaggtagccaagagaatcgcggcctcccttacaggagaccagcgtgtgggcctcatcccacgcaacgccgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggatgactacgggatgagcaatcccatcca +cgatgccctcaagttgcaggaactagctgacacttgtcccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaatctggccaacccggcaccactggactatgt +caactttgaggcatg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +aacgtgactttccaggccaacctgacatgtggaagaacgctttccattctgatttctcccacataaaattaa +cactggctccacagggtggtttcgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ctgttggctccctcattgcccgggcatcagggctacttcatgagagactagatgagtttgaactacagggcc +cagctcccaccaccttcaactttgatcgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +acggattgatggacacgatgaaagttgggaggcagctcaaggatgttagaaccatgccagaactcaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgtacggtggctgcacctacgcacttgagtctgatg +gcaagggcaatgtgaaagttgacaaagttcagagtgcctctgtgcagaccaacaatgagctggccggcgccc +tacaccatctaaaatgcgccagaattagatactatgttaagtgtgtccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaartggaagatacagggga--------ggccaccaacaaggatgggtgcccaagacccaaa-- +-gat----gatgagg---agctcgtcatttcatccgacgacatcaaaactgagggcaagaaggggaagaaca +agacaggccgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagatgaaagaaacggcaaatactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaggaggaggaggccaagatccggcaaa +ggattttcaggccaacaaggaaacaacgcaaagaggaaagggcctctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaagggaaaactgtgggctgatgatgacagaagtgtggact +acaacgagaagctcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctctc-ccagtttgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaagcaaattcagatacacaaatcaggcgaattttgtcgcttgaggttcccaaaaccaatc +agaactgatgtgacgggtatgatcctggaagaaggcgcgcctgaaggcaccgtggccaccctactcatcaag +agacctactggagaactcatgcccctagcagccagaatgggyacccatgcaaccatgaaaattcaaggacgc +accgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactttgtggttattggggtccacacagccgcc +gcccgcgggggaaacactgtcatatgtgccacccaagggagtgaaggggaggccacacttgaaggtggtgac +aataagggaacatactgtggtgcaccaattctaggcccagggagcgccccaaagctcagcgccaagaccaaa +ttctggagatcatccacaacgccactcccacctggcacctacgaaccagcctaccttggcggcaaggatccc +agagtcaagggcggcccttcactgcaacaggttatgagggatcagttgaaaccattcacagagcccagaggc +aaaccaccaaaaccaagtgtattggaagctgccaagaaaaccatcattaatgttcttgaacagacaattgac +ccacccgagaaatggtcattcgcgcaagcctgcgcgtcccttgacaagaccacttccagcggccatccgcac +cacatgcggaaaaacgactgttggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagctagtyaaa +actgacaaaatctatggcaagatcaagaagaggcttctctggggctcggacctagcgaccatgatccggtgc +gcccgagcattcggaggcttgatggatgaactcaaagcacactgtgtcacactccctgtcagggttggtatg +aacatgaatgaggatggccccatcatctttgagagacattccagatacaaataccactatgatgctgactac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagccctagaaattatgg-tyaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcccagcgtgatggatgtaggcgacttc +acaataacaatcaatgagggtctcccctctggggtgccctgcacctcacaatggaattctattgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatttgtcccctgacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatttctgaagatttgaat +ggcctgaccttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atacttaggcagatgtactggactagaggacctaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccagcattctacagcaaaatt +agcaaactggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgctggcgccgctatcgcggcacctgtggcgggtcaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaatgctccggg +tgaaatactatggagcgcggccttgggccccgacttaaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaagtaatcctcgcggggaatgcgttcaccgc---cgggaagatcat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatgt +agtagtagatgttagacaattggaacctgtattgattcccttacctgatgttaggaataatttctatcacta +taaycaatcaaatgaa---tctactattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaggatgtcttcacggtctcttgccgagtcctcacgaggccatcccccgattttgattttatttttct +ggtgccacccacaattgaatcaagaaccaaaccattcaccgtcccagtcctgactgttgaggaaatgaccaa +ctcaaga---ttccccatccctttggaaagactgtatactggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttgggcactacccagctgtctgccgtcaacatctgcamctt +cagag-----------------------------------------gggatctcactcaca----------- +-----------ttgcaaa------------------------------------------------ct---- +-------ctcatg----------------------------------agtacaga----------------- +----------------atgaatttggcttctccaaattggaacaattatgacccaacagaagaaattccagc +ccccctgggaaccccagattttgtgggaaagattcggggcttgctcacccaaa------------------- +-----cc-----acaaggggggatggctcgacc--------cgc-----------gcccacttagccacggt +gcgcactgggagtgctgacttcactccaaagctgggcagaatccaattctcca---------ctgacacmga +ccatgactt---tsamtmtsrccaaaacacra---------------------------arttcaccccrg- +--------tyggygtcgyccaggatggtgacaacccacaccaaagtgaaccccaacaatgggtgctcccaar +ttactcaggyaga-smtgky------cacaatgtgcayctagccccwgcygttgcccccactttcccaggtg +agcagcttctcttctttaggtccaccatgcccg------ggtgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcacttctaccaagaagcagccccagcaca +atctgatgtggcyctgctgagattygtgaatccagacaccggtagggttctgtttgagtgcaagctccataa +atcaggrtatgtcacagtggcccacwcyggctcacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggarcggggcgtaga---------cg +tgtac---------cataatggctggagctctctttgctggattggcttctgatgtccttagctctggactt +ggttccctaatcaacgctgg---ggccggggtcatcaatcaaaaagttgactttgaaaayaacagaaaattg +caacagractctttccaatttagtagtaatctgcaacaggcttccttycaacatgataaggagatgctccaa +gcacaaattgaggcyaccaagagaytgcaacagggcatgatacagatcaaacaggcagcgctccgagagggt +ggattytctgaaacagatgcagcccgcggggcaatcaacgcccccatgacaaagactctggactggaatgga +acaaggtactgggctcctgatgccaggaccaccacatacaacgcaggcagcttttccacccct--------- +ca---------------------gccttcgggagcatc---------------------------------a +tcargaa----------------gaaataatgttagggcttc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tgtgcttt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgc-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggaaccagtgtctcgagtcgcccgt------------------c +atctgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---aggggtctctcaacacatcttttgtcaccccaccatctagtag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429785.1/1-7509 |UNVERIFIED: Norovirus Hu/GII.4/NIHIC17.2/2012/USA genomic sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagy +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------rgaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +yccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagrttgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctyaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagratcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcatygcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaakggtaatgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggyctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agyaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggyacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgay +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcrcactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctytagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctccyagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtctyccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgtyatttctgaagacttagat +ggyttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggycccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaartactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tcyaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtgccactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gatccagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttytgtttgagtgtaagcttcataa +accaggctatgttacagtggctcacactggtcaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgccccyatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctytcgttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcytagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggarcggg +acaaggtactgggctcccgatgctaggactacaacatayaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccgggattcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429787.1/1-7506 |Norovirus Hu/GII.4/NIHIC28.5/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---ggatggcgtttccggcttgcctgatctttccaccgtcagacaacc +ggaagaatccaacacggccttcagtgtccctccactcagtcagagggagaacagagacgctaaggagccact +gactggaactattctggaaatgtgggatggagagatctatcattatggtctgtatgtggagcgaggtctcat +attaggtgtgcacaaaccaccagccgccattagcctcgccagaatagaactaacaccactctccttgttctg +gaggcctgtgtatactcctc---agtacctcatctctccagatactctcaggaaattgcacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatactcctgtgtacactgtcttcgctattcac +caggcccataaaagatttaatagggaagctaaggccccttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttgggagaactcttt---ggtattttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcaaccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatagtgagatccattgaggacgcagt +tctggatctcgaggcaattgagaacaaccatatgaccaccttgctcaaagacaaagacagtctggcagtcta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgcagcacgctctctggtgcaccgagcaaaggaggagct +ctccagcagaccaagacctgtggtgatgatgttgtcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctcccttacaggagatcagcgtgtgggcctcatcccacgcaacggcgt +cgaccactgggattcgtacaggggggagaggatcgtcctttgggacgactatggaatgagcaatcccatcca +cgatgccctcagactgcaagaactcgctgacacctgccccctcaccctaaattgtgataggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcaccactaacctggctaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcattgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgcgacttcccaggccaacccgacatgtggaagaacgccttcagctctgacttctcacacataaaactga +cactggctccacagggtggcttcgacaagaacggaaacaccccacacggaaagggcgtcatgaagactctca +ccattggctcccttattgccagggcatcagggctactccatgagaggctagatgaatttgaattacagggcc +caaccctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgcagaaaacaaat +atgggttaatggaaacaatgaaagtcgggagacagctcaaggacgtcaggacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccaaatagtatacaatggtagtacctacacacttgagtccgatg +gcaagggcagtgtgaaagttgacagagttcagagtgcctccgtacagaccaacaatgagctggctggcgcac +tgcaccatctaagaagcgccagaataagatactatgttaagtgtgtccaggaggccctgtattccataatcc +agattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaaaacctatggt +ccaaaccacaagtggaaaacacagagga--------gactaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgaaggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagagcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcttctctcggcctagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagcccccccaagcatctggtcgaggatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggaattcttt +ggggtctctgtcaagcaaattcaggtacataaatcaggtgaattttgccgcttgaggttcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactacttattaaa +agatccactggtgaactcatgcccctagcagccaggatgggaacccatgcaaccatgaaaattcaagggcgc +actgtcgggggtcaaatgggcatgcttctgacaggatccaacgccaaaagtatggatctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggttataggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaagctacactcgagggtggtgac +aataaaggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaagctcagtactaagaccaaa +ttctggagatcgtccacagcaccactcccacctggtacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagctgaagccatttacagagcccagaggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcatttgcacaagcttgcgcgtcccttgacaaaaccacttccagtggccatccacac +cacatgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcggaccaagcttccaaggcc +aacctgatgtttgaagaagggaaaagcatgaccccaatctacacagctgcacttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgattcgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtatacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagagatcatgg-tgaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaggacctcctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggccttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaggctaattccctcttc +tctttctatggtgatgatgaaattgtcagcacagatataaaattggacccggaaaaattgacagcaaagctc +agggaatatgggctgaagccaacacgccctgacaaaaccgaaggaccccttgtcatctctgaagacttggat +ggcctgaccttcctgcggaggactgtgacccgcgacccagcaggttggtttgggaaactggatcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagatccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcacttcatggcccagcattttacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctaccccatctga---tgggtcctcggccaacctcgtcccagaggccaacaatga +ggttatggctttagaacccgttgctggcgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgtccttgggccctgatttgaacccctacctttcccacttgtctagaatgtataa +tggttatgcaggtagttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---tgggaaaatcat +atttgcagcagtcccaccaaatttccgaactgaaggcttgagccccagccagatcaccatgttcccccacat +aataacagatgttagacaattggaacctgtgttgatccccttgcctgatattaggaacaatttctaccatta +taatcaatcaaatgac---cccactattaaattgatagcaatgctgtatacgccacttagggccaataatgc +tggggatgatgttttcacagtctcttgccgagttctcacaaggccatcccccgattttgatttcatatttct +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagtcctaactgttgaggagatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggccctagcagtgcctttgttgttcagccaca +aaatggtagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccgca----------- +-----------ttggaaa------------------------------------------------tt---- +-------ctcgcg----------------------------------agtacaga----------------- +----------------atgaacctggcctccctaaattggaacaattatgacccaacagaagaaatcccagc +ccccctgggaaccccagattttgcaggcaagatccaaggtgtgctcacccaga------------------- +-----cc-----acaaggcatgacggttcgacc--------cgc-----------ggtcacaaagccacggt +gtacactggaagtgccggattcaccccaaagctaggcagtgttcaattctcca---------ctgacacaga +caatgacct---tgaggccaaccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcatccaggacggcaacgc---ccaccaaggagaacctcagcaatgggtgctcccaaa +ctatgcaggcaga-gatggt------cacaatgtacacctagcccctgccgtggcccccactttcccgggtg +agcaacttctcttctttaggtccaccatgcccg------ggtgtagcgggta------tccca--------- +--atatgaatttggactgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atccgacgtggcattacttagatttgtgaatccagacacaggtagggttttgtttgagtgcaaacttcataa +atcaggctacgtgacagtggctcacactggcccacatgatttggtcatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtagg---------cg +tgcat---------tataatggctggagctatcattgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagtcgattttgaaaataataaacaactg +caacaaaactccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggagatgatgggaatcaaacaggcagtactcctaaagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggttttggactggagtgga +acaaggtactgggctcccaatgctagcaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------gccctcgggggcgtt---------------------------------g +ccaggaa----------------gaactaatctcaggactgc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtct-----attcaaatca------aactgtttcaac----------gag--------ac +ttggtac--------ttcagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------gaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---gaggggctcacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgcct------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429788.1/1-7503 |Norovirus Hu/GII.4/NIHIC20/2012/USA, partial genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgttacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagccttgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaataactgttatgctttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaagcccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctttgtcctcgctattcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggacctcgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccactttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccaccttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctacaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaattaggtactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaatcgctggggctgcatttgtcaccacgcgcatcgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaaacacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaagaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggttcacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgtcgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcttcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaggctgccaagaagaccatcattaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaactggtcattgcggagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +cggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagtcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgca----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccgacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaatcagaatacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggcagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatatgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatggcaaaaactttggactggagcgga +acaaggtactgggctcccgatgccaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcgct---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggagcccacaacatctcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------g-------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429790.1/1-7509 |Norovirus Hu/GII.4/NIHIC17.5/2012/USA, complete sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggagaaatctatcattacggcctgtatgttgagcgaggttttgt +gctgggcgtacacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgtactg +gagacctgtgtacacccctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcggctaacatattcctgtgcgccctgtcttcactattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaggagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgctctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgagacgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgagacttcccgggccaacctgacatgtggaaaaacgcttttagccctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatggaaagggtgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggtc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaagcaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagtacagagcacctccgttcagaccaacaacgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgaagagtaca +agagagttagagaggaaagaaatggcaagtactccatagaggagtatcttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgagttctgtcgcttgaggttcccaaagccaatc +aggaccgatgtggctggcatgattttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaaggtcgc +actgttggaggtcagatgggcatgcttctgacaggttccaacgccaaaagcatggatctaggcaccacgcca +ggcgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaaaaacatgaccccggtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgctcactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagcacagacataaaattagacccagaaaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttattgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaacctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttccccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatactaaccaaaacacta---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggcactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgccag------gaagcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgacgtcctcagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaacagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +tcacaaattgatgccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcacc---------------------------------a +cctggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccagggttcctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctatgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429791.1/1-7444 |Norovirus Hu/GII.4/NIHIC1.5/2011/USA, partial genome +------------------------------------------------------------------------ +------------------------aaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgacacagtggtt +tcttatagcg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcagtcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaacctatcattatggcctgtacgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagccttcgacaacaactgctacgccttttgttgttgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgactccaagttaaagaaggcggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacgtttgcaggcatagtggagtccttgatactcttagcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactacagggacctgaggaccttgcagtgga +gcttgtccctgtagtgatggggggaattggtttggtgctaggattcaccagagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaaacactctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaaaacccaccttgccag +agaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggccttgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaacttgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaaggacgccttcaggcctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttgttgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccaaatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggtcgacagagtccaaagcgcctccatgcagaccaacaatgagctggctggcgccc +tacaccatctaaagtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagagactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcataagtcaggtgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacaacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaataattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcactggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcacttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcatttggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggacctcttgccatctctgaagacttgaat +ggcctgactttcttgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttcg +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccggccaggttactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattggtagcaatgttgtatacacctcttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatattttt +agtgccacccacaattgaatcaaaaactaaatcattctctgtcccaattttaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtacccttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaaa----------- +-----------ttacaaa------------------------------------------------ta---- +-------ctcaca----------------------------------gctacgaa----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +ccccctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgaaggaaaatggctcaacc--------cgt-----------gcccacaaagctacagt +gtacactgggagcaccggatttactccaaaactgggtagagtccaatttgtca---------ctgacacaga +cagagatct---tgaaactaaccaagacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtga---tgcccaccaaaatgaaccccaacaatgggtactcccaag +ttacttaggtaca-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggactgtctgcttccccaggaatgggtgcaatatttctatcaagaggcagccccagcaca +atctgatgtggctttgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgtcacagtggctcacaccggccgccatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcagccccttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagattccttccaatttagtagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggaatggg +acaaggtactgggctcccggtgctaggactacaacatacaatgcaggccacttttccactccc--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +agcatctt-----------ctaat------------tcttctactgctacct-------------------- +----------ctgtgt-----attcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgaa-ctcccagactggcgctt------------tcaatacgcgcaggcagcctctctttgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KF429792.1/1-7509 |UNVERIFIED: Norovirus Hu/GII.4/NIHIC1.6/2012/USA genomic sequence +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgttaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgatatagtggtt +tcttatagcg----------tcaa---agatggtatctctggtttacctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtatccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtacgtagagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcttcatgtgattg +gtcttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactgcagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tgtgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaaagcagtctggcagccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatygt +gggcacartcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaaraccyaccttgccag +agaagtggctaagagaatcgcagcctccctyacaggagaccagcgtgtaggcctygtcccacgcaatggcgt +cgaccaytgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +mgatgccctcagattgcaagaactygctgacacttgtcccctcaccctraactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaayytggctaacccagcaccactggactatgt +caacttygaagcatg-ctcgaggcgcatygacttcctcgygtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagracgccttcagtcctgatttcwcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccaratagtgtacagtggtrgcacctacayacttgagtctgatg +gcaagggtaatgtgaaggtygacagagtccaaagcgcctccrtgcagaccaacaatgagctggctggcgccc +tacaccatctaaagtgcgccagaatragatactatgtcargtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcrtcaagcgcwtga------ayatacaaarcctatggt +ctaagccacaagtggaaaacacagagga--------gactaccagcarggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgaaggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agggctgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggayctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcacttgataagaccacctccagtggtcacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaagatttatggcaagatcaagaaaaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttcccctagcgtggtggacgtgggtgacttt +acaatatcaattaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttggat +ggcctgactttcttgcgaagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctcg +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggccaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccttggattagaaacaattttgtgcaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaartactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcgccgc---cggaaaaatcat +attcgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccactt +aataatagatgttaggcaactggaacctgtgatgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacacctcttagggctaataatgc +tggtgacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaaaaactaaaccattctctgttccaattttaactattgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccccagcagtgcccttgttgttcaaccaca +aaacggcagrtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcayccata----------- +-----------ttrsaaa------------------------------------------------ta---- +-------stcata----------------------------------gctacmma----------------- +----------------atgaatttggctgctcaaaattggaacagttatgacccaacagaagaaatcccagc +cccyctaggaactccagatttcgtgggaaagatycaaggtgtgctcacccaaa------------------- +-----cc-----acgaaggcagatggctcaacc--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgaatttgttccaaaactgggtagagtccaatttgcca---------ctgacacaga +cagagatct---tgaagctaaccaaaatacaa---------------------------agttcaccccaa- +--------tcggtgtcatccaggakggtaacactacccaccgaaatgaaccccgacaatgggtgctcccaag +ytactcaggcata-aataat------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatgratttggactgtctgcttccccaggaatgggtgcaryatttctatcaagaggcagccccagcaca +atctgatgtggctytrctaagatttgtgaatccagacacaggtagggttttgtttgagtgyaagcttcataa +atcaggytatgtcacagtggcycacaccggccamcatgatttrgttatccccccyaatggttatttcagatt +tgattcctgggtcarccccttctacacacttgcccccatgggaaatggracggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaayagaaaattg +caacaagmttccttccaatttagtagcaatctrcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggrttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaarggttttggactggagtggr +acaaggtactgggctcccgrtgctargactacaacatacaatgcaggcyacttttcyactccy--------- +ca---------------------acactcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +mrwatctt-----------ctaay------------tcttctactgctamct-------------------- +----------ctgtgt-----aytcaaatca------aactrcttcaac----------gag--------ac +ttggttc--------tacagctggttctggyaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttggrttgaggatca +aaataggratttgtcacctttyatga---rgggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccrtgcmcaa +agaagttttgaa-ctccyrgactggcgctt------------tcaatacgcgcaggcagcctctcttygctc +acattcgtaggcgaggggagtcacr--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC894942.1/1-7556 |Norovirus Hu/GII.4/Guangzhou/GZ2010-L88/CHN/2011, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcaccctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---aggtggtgtttccggtatacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctactattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacgcggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcatcctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggaatccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaggagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctcccaggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcttccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaagggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgcga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgaaggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttttcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggataaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttccctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggagactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtagcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaaggaaagaacatgactccggtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcattccaggtacagataccactatgatgcagactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-tcaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagaaaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccccgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaacaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcaatcaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +tcctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----actaagggggatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaaa +ttattcaggtagt-gatgtc------cctaatgtacacctagcccctgctgtagcccccaatttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgaatgtaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaagccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgcttttccgcccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +cacatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>KC894943.1/1-7556 |Norovirus Hu/GII.4/Guangzhou/GZ2010-L91/CHN/2011, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcaccctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---aggtggtgtttccggtatacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggaatccttggtactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaggagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcttccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcagtcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgaaggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggataaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggagactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccgcccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattggc +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccggtctacacaggtgcacctaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatctttgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-tcaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagaaaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccccgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaacaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcaatcaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +tcctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----actaagggggatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaaa +ttattcaggtagt-gatgtc------cctaatgtacacctagcccctgctgtagcccccaatttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgaatgtaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaagccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgcttttccgcccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +cacatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>JX439815.1/1-7538 |Norovirus Hu/GII/Seoul1055/KOR/2010, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaatgg------agaggatgacatagtggtt +tcttatagcg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagagtagagaagctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcactatggcctgtacgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcctttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtggctaacatattcctgtgtgcattgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgaactacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaaaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +agaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagtcctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtacagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgagggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactcaatagaagagtaccttcaagacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattatggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaattatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaggaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgcggagagctgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgctcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagccatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggccctagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctgggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcgacc--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggcg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgcttccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggcactgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttactgtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccactcct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggactgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +catatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------aa------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX439816.1/1-7537 |Norovirus Hu/GII/Seoul1072/KOR/2010, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcctccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggcgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcttgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcttcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcttttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcgaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgaaagactagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccaaatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccaaggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggaaccgtggttacactactcatcaaa +agatccactggggagctcatgcccctggcagctaggatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctataagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatctgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtaattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggccgtcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtatcccctaggaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcgacc--------cgt-----------ggacacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatctggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccgggctt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaattcagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcttggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------a------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX439817.1/1-7538 |Norovirus Hu/GII/Seoul1282/KOR/2010, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaggcctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggggtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgagaaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgacctggaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaaaggcaatgtgaaagttgacagaatccaaagggccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagcggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcggtcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagccatgctgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgaggcagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------aa------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX439818.1/1-7537 |Norovirus Hu/GII/Seoul1367/KOR/2010, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcttcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggttctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagttgagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgaactacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaggacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctagtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaaccctatcca +cgatgccctcagattgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagtcctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgttaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactactagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagaatacgatgaataca +agagaattagagaagaaaggaacggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaagggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagctttggttcaggctggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcacccgagggcaccgtggtcacactgctcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggccactggagtccacacggctgcc +gctcgtgtgggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaactattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaaaaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggatccagaaaagttgacagcaaaactc +agggaatatgggttaaaaccaacccgtcccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctacggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcgctccacggcccagcattctacagcaagatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggccggcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagtcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagccatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgacttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgacactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggtcaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcttggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------a------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX439819.1/1-7538 |Norovirus Hu/GII/Seoul1488/KOR/2011, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcctccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggccttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaatatattcctgtgtgccctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggccccttaacatcctcaacatcttagcctcgtgtgattg +gacttttgcaggtgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttacttggcgactacgagctacaagggtctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaagttgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggcgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcttccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctctctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcggtcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagccatgctgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactggaagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctaccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgaggcagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------aa------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX448566.1/1-7538 |Norovirus Hu/GII.4/Seoul/1071/2010/KOR, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaacccacaa +aga---------------------cccccacgaccacctattccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgccaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactatgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +tctggatctcgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagtctggcaaccta +tatgagaacacttgacctggaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcaagaatcgccgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggttgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcggaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgttgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctgatcacaggttctgaaa +ttaggagaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaagtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaagaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaaatcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggccgtcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagccatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgacttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgacactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatctggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccgggctt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaattcagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcttggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-t-t-tgat-----ta-----t------aa------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC631814.1/1-7575 |Norovirus Hu/GII.4/MI001/2011/USA ORF-1, ORF-2, and ORF-3 genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttacctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgataacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaaatggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctggtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcaggactactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacatttcaatcaagaagtgccagatagtgtatagtggttgcacctatatacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagtgaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttccgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagttatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgtcctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaactggagcagggttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccgtacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatcttagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgatccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagcaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagc------cacaatgtgcacctagcccctgctgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgataaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcagcgcccccatgacaaagactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctcc------------------ag +tacacctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgac-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaa----------------- +------------------------------------------------------------------------ +- +>KC631815.1/1-7507 |Norovirus Hu/GII.4/MI002/2011/USA ORF-1, ORF-2, and ORF-3 genes, complete cds +-----------aagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttacctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgataacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaaatggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcaggactactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacatttcaatcaagaagtgccagatagtgtatagtggttgcacctatatacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagtgaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttccgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagttaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagttatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgtcctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgaccttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaactggagcagggttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccgtacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatcttagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgatccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagcaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagc------cacaatgtgcacctagcccctgctgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttaggtt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgataaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcagcgcccccatgacaaagactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctcc------------------ag +tacacctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaag------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>HF952122.1/1-7559 |Norovirus Hu/GII.4/C00007880/2011/UK complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---ggatggtgtatccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaggctag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatctgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaatccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccgagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcccctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctatatctacaagagaggcaacgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgtac +cacgtacggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaac +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattcctcactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctgaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaaccccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcacacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952124.1/1-7559 |Norovirus Hu/GII.4/C00007892/2011/UK complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---ggatggtgtatccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaggctag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatctgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaatccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccgagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcccctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctatatctacaagagaggcaacgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgtac +cacgtacggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaac +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattcctcactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctgaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaaccccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcacacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952125.1/1-7559 |Norovirus Hu/GII.4/C00007893/2011/UK complete genome +----gtgaatgaaaag---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttccagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatttc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaggaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtaccttatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgcgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcaggccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacgtgccccctcactctaaactgtgacaggattgaaaataa +aggaaaagtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atggactgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacaccgaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggactcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaga +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtaacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcttatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttaaagccattcaccgagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaaaaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgtgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +ctgctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattttacagcaaaatc +agcaaattggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccactatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctgcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaagacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccgaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacacc------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcaggtctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggagtgggtgcagtatttctatcaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccacccggggttcctcc------------------at +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952128.1/1-7559 |Norovirus Hu/GII.4/C00007915/2010/UK complete genome +----gtgaatgacgat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtacacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaactta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggtaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccctcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttatagtaaaatc +agcaaattggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcctgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaaaattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctgatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952129.1/1-7548 |Norovirus Hu/GII.4/C00007916/2011/UK complete genome +---------------t---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---ggatggtgtatccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaggctag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatctgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaatccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccgagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcccctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctatatctacaagagaggcaacgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgtac +cacgtacggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaac +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattcctcactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctgaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaaccccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcacacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952130.1/1-7559 |Norovirus Hu/GII.4/C00007918/2011/UK complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctggcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ctc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaagttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcaggccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacgtgccccctcactctaaactgtgacaggattgaaaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatttggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgtgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacaccgaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtata +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaga +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgattatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgtgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +ctgctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattttacagcaaaatc +agcaaattggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcagcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccgttctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaagacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttattcaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacacc------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggagtgggtgcagtatttctatcaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaacccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggtcaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccacccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttccattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952132.1/1-7559 |Norovirus Hu/GII.4/C00007928/2011/UK complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---ggatggtgtatccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcagaccctatcaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgactg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagctggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatggtgaggtctatcgaggatgcagt +cctagatctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagaaaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgcccccttactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaggctag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgccttcagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatctgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaatccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccgagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttggaagaaggcgcccctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctatatctacaagagaggcaacgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaactcttagcaccaagaccaaa +ttctggagatcgtctacagcgtcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactacagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgtac +cacgtacggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaac +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattcctcactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttatagcaaaatc +agcaagttggtcattgcagagctgaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaaccccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccagaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcacacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccctatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcctccttccaatttagtagcaatctacaacaagcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----c--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952133.1/1-7559 |Norovirus Hu/GII.4/C00007934/2010/UK complete genome +----gtgaatgaaagt---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtacacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagctagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaagatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttatagtaaaatc +agcaaattggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaatctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttgcccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaaccaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcactacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaaaattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggt +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgcccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HF952135.1/1-7559 |Norovirus Hu/GII.4/C00007952/2011/UK complete genome +----gtgaatgaaaaa---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttccagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatttc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaggaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtaccttatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgcgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcaggccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacgtgccccctcactctaaactgtgacaggattgaaaataa +aggaaaagtctttgacagtgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacaccgaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggactcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaga +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtaacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcttatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttaaagccattcaccgagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaaaaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgtgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +ctgctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattttacagcaaaatc +agcaaattggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccccagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctgcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaagacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccgaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacacc------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcaggtctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggagtgggtgcagtatttctatcaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttctttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaagttgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccacccggggttcctcc------------------at +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC631827.1/1-7559 |Norovirus Hu/GII.4/Hong Kong/CUHK6080/2012/CHN, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttccaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtagaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagatactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---taggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactatttac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaactcttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgacgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcaggccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgt +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagcttagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +actgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaagctc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagcaaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtggcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggttatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC662537.1/1-7492 |Norovirus Hu/GII/Hy-718/KOR, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacag +aga---------------------cccccacgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaaccagtggtt +tcttatagcg----------tcaa---agatggtgtttccggcttgcctgagcttatcactgtcaggcagcc +ggacgaagtcaacacggcgttcagtgttcccccactcaaccaaagggagaatagggacgccaaggaaccact +aactggaacaattctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtctagt +acttggcgtgcacagaccacctgctgccatcagccttgccaaggttgaactaacaccactctctctgttttg +gaggccagtgtacacacctc---agtatctcatttctccagacactcttaggaggctgcacggagaatcgtt +cccctatacggcctttgacaacaattgctatgccttctgttgttgggtcctggacctaaacgactcgtggtt +gtg---taggagaatgatccagaggacaactggtttctttaggccctaccaagactggaataggaaacccct +tcctactatggatgattccaagttgaagaaggtagctaacgtattcctgtgcgcgctttcttcactattcac +caggcccatcaaagacataatagggaagctgagacctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgaatacgagctgcaggggcctgaggaccttgcagtgga +actcgtcccaatagtgatgggggggattggtttggtgctaggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgcaaagaccttggtgcatacgggctggaaatcttgaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggacgcggt +gctggacctcgaggcaattgagaacaaccacatgactgcccttcttaaagacaaagatagcttggcaaccta +tatgagaaccctcgacctcgaggaggagaaggccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaatgctcttctggcgagaatcgccgctgcgcgctccctggtgcatcgggcgaaggaggagct +ctctagcagaccaagacctgttgttgtgatgatatcaggcagaccagggatagggaaaacccaccttgccag +ggaattggccaagagaattgcagcttccctcacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccattgggacgcatacaagggagaaagagtcgtcctgtgggacgattatggaatgagtaatcccatcca +tgatgccctcagattgcaagaacttgctgacacctgccccctcacgctaaattgtgacaggattgagaataa +aggaaaggtatttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +taactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagatgcccctgaggtcgaaaaggcaa +aacgtgacttcccaggtcaacctgacatgtggaagaacgcttttagtcctgacttctcgcacataaaactga +cgctggctccgcagggaggtttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaactctca +ccactggctctctcatcgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caacccccaccaccttcaacttcgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +acgggttaatggacacaatgagagttggtagacaactcaaggatgtcaggactatgccagagctcaaacagg +cactcaagaatatctcaatcaagaggtgtcagatagtgtacagtggctgcacctacacgcttgaatctgatg +gcaagggtgacgtgaaagttgatagagttcagagcgccactgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgtgccagaattagatactatgtcaagtgtgttcaggaggccctgtactccatcatcc +aaattgctggtgctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagatctttggt +ccaaaccacaggttgaagatacagagga--------gaccgctagcaaggatgggtgcccagaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aatctggccgtggcaagaagcatacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaaatactccatagaagagtaccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaggaagaagaagccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggagagagcctctctcggcctggtcacaggctctgaaa +tcagaaaaagaaacccagacgatttcaagcctaaagggaagctgtgggctgatgacgacaggagtgttgact +acaacgagagaatcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagtctgttcataacatcaactcatgtcataccccatggcgcacaggagttcttt +ggggtttctatcaaacagattcagatacacaaatcgggtgaattctgtcgcttgaggtttccaaaaccaatc +aggactgacgtgacaggcatgatcttggaagaaggtgcgcccgaagggaccgtggccacattactcatcaag +aggccaactggagaactcatgcccttggcggccagaatgggaacccatgcaaccatgaagatccaagggcgc +accgttggaggtcaaatgggcatgcttctaacaggatccaacgccaagagtatggatctgggcaccacaccg +ggtgactgtggttgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacggctgcc +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggtggtgac +aacaagggaacctactgtggtgcaccgatcttaggtccaggtagtgccccaaaactcagtaccaagactaaa +ttttggagatcatccacagcaccactcccacctggtacctatgaaccagcctaccttggcggcaaagacccc +agagtcaagggtggtccttcattgcaacaagttatgagggaccagctgaaaccatttactgaacccaggggc +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcatgcgcgtccctcgacaagaccacctctagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgtacgaagagggaaagaacatgactccagtttacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaaaatcaaaaagaggcttctctggggctcggacctggcgaccatgatccggtgt +gctcgggcttttgggggcctgatggatgaacttaaagcacattgtgtcacactccccgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgaaagacattccagatacaaatatcactatgatgctgattac +t-ctcggtgggactcaacacaacagcgggccgtactagcagcagccttagaaatcatgg-ttaagttctccc +cagaacctcatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggatgtaggtgatttc +aaaatatcaattaatgagggcctcccctctggggtaccctgcacctcccaatggaattccatcgcccactgg +ctcctcaccctctgtgcactttctgaggtcacaaacctgtcccctgacattatccaggccaattccctcttc +tccttctatggtgatgatgaaattgtgagcacagacgtaaagctggacccagagaagctgacagcaaaactc +aaggaatacgggctgaaaccaacccgccctgacaagactgaggggccccttgttatctctgaggacctgaat +ggcttgactttcctgcggaggactgtaacccgcgatccagctggctggtttggaaaactggaacagagttca +atacttaggcaaatgtactggactaggggccctaatcatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtctttgctgggcgaggctgccctccacggcccagcgctctacagcaaaatc +agcaagttagttattgcagaactaaaggaaggtggcatggatttctacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatcaaa---tgatggtgcagctagtctcgtaccagagggcattaatga +gactatgccattggaacccgttgctggtgcatctattgctgccccagtggcgggacaaaccaacataattga +cccctggataagaacaaattttgtacaagcccctaatggagagtttacagtgtcaccaagaaattcccctgg +agaaattttattaaatttagaattaggaccagatctgaatccttatttggcccatcttcctagaatgtataa +tggttatgctggaggtgttgaggtgcaagtgctcctcgctgggaacgcgttcacagc---aggtaagatatt +gtttgcagcaatcccacctaactttcctgtagatatgattagcccagctcaaattactatgcttccccattt +gattgtagatgttagaactttggaacctattatgatacccttgcctgatgttaggaatgtgttctatcattt +taataatcaacctcaa---cctagaatgagattagtggctatgctttatacccccttgaggtctaatggttc +aggggatgatgtcctcactgtgtcttgtagagtgctaactaggccaactcctgattttgaatttatctatct +ggtgcccccttctgtagagtccaaaactaaaccattcacactaccaatattaaccatttctgaattgaccaa +ctcccgg---ttccctattccaatcgagcaattgtatacggctccaaatgagaccaatgttgtccagtgtca +gaatggcagatgcaccttagatggagagctccagggcacaacccagctgttgtcaagtgcagtttgctctta +caggg-----------------------------------------gcaggactgtggccaataatg----- +----gggataattgg----------------------------------------------------g---- +-------atcaaa----------------------------------atttgc------------------- +-----------------tccagctgacctatccaaatggtgcaagctatgaccccactgatgaagtgccggc +accattgggcactcaagattttagtgggatgttgtatggagtgttgacccagg---acaatgtgaatg---t +gagcaca-----ggagaggccaaaaatgctaag--------ggg-----------atatac---------at +atccaccactagtgggaaattcaccccaaaaattgggtcaattggattgcatt---------ca---ataac +tgagcacgt---gcaccccaaccaacagtcgc---------------------------ggttcacccccg- +--------ttggagtc---gccgtgaatgagaaca---------ccccctttcagcaatgggttctgccaca +ttatgcaggtagtactcgct------ctc-ataccaatttgggcactgctcttgccccgactttccctggtg +agcaattgctgttcttcaggtcccgtgtcccat------gtgtccaaggcctacaggggcagg--------- +--atgcgttcatagattgcctcctgccccaagagtgggtgaatcatttttaccaagaggcagccccttccca +agcagacgtcgcccttattaggtatgtcaaccctgatactggtcgtacgctgtttgaagccaagttgcatag +atcaggtttcatcactgtgtcacatactggtgcttaccctcttgtagtccccccaaatggtcattttaggtt +tgattcttgggttaatcaattttactcactcgcccccatgggaactggtaatgggcgtaga---------ag +aatcc---------agtaatggcaggagcatttatagctggtttggccggtgacatgctgacttctgctgtt +ggttcactgacctctgcagg---agccaatgccatcaatcagaaattgaattttgattacaacaaacaa--- +------------------------------ctccaaaatgcatccttccagcatgataaggaaatgttgcag +gctcaaattgatgccacaaagaaacttcaatctgaaatgattgcaatcaagcatggggttttgaccgcgggc +ggcttttccccagctgatgcagctagaggggcagtcaatgccccaatgactagagtgctggattggtcaggg +acacgttactatgctccaaattctgtgcaaactactagctattctggacaattcaccccctcg--------- +-------------------------------ccagtcc---------------------------------a +ccgggtg----------------caggtgaaat--------------------------------------- +------------------------------------------------------------------------ +--cttctt-----------ctaat------------tcatctcagcggaccgcagctccaag---------- +--cagcatccgtagtc-----tgtcaactca------atcaacttct-------------gt--------aa +caggctc--------tacctccctaggggggccctct---gaaacctcct---------------------c +tagctc---------------------------------------tagaacagcagactgggt---acggca +acagagggctcttagcccgtacatgc---atggagccctgcggacggcatatgtcacaccgccgtcaagcag +ggcctcc---agtg------------------------------tgagct---ctgtctcaacagtgcccaa +aggggttttgga-ctcctggacacctgtgt------------ttaacacacgcaggcagccgctatttgcac +acctcaggaagaggggggagtcaca--------agtttag--t-----------gaaaaggat--------- +-----------------------------------------aatcaatgt-ttaaatg--------tgatt- +---------------tt---attttccttgca---------------------------------------- +------------------------------------------------------------------------ +- +>KC960615.1/1-7511 |Norovirus Hu/GII.4/20199/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------ccaccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccaccatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcctataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcctgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaacatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctccggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcattccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagagaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccactcct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccgccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC960616.1/1-7499 |Norovirus Hu/GII.4/20406/2010/VNM, partial genome +------------------------------------------gccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcgt +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacagttctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagacctcggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccccattca +cgatgcccttaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-ggc----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggggtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacagatacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggttgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaagctacacttgaaggcggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccagtcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtaagcacagacataaaattggacccggaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagttccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaacgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517361.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH51/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagc +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcgaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagcccaaggatgtcaagaccatgtcagaccttaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagcgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tataccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaggagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgtctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacgggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactatcatatgtgccacccaggggagtgagggagaagccacacttgagggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatctcttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacccaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatgcggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcttgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gcacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgccgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------ccttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517362.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH52/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaactgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcgtagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcacccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaactgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgctttgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cggccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagaccttaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tataccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatgattgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctggcgggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactatcatatgtgccatccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatctcttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcgagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaggtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggacccaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctccgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaactagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattcccagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatagctctggagcccgttgttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgaccgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatatcgcccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccagcagtgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaccttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgacgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------ccttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517364.1/1-7509 |Norovirus Hu/GII-4/New Taipei/CGMH54/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggacttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgtattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cactggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacgtcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagtcacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccagaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcctggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtacaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcttccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacaccggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcggagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctacactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgtagctaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccgcccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +caaatctt-----------ctagc------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccacttttcgctc +acatttgtaagcgaggggagtcacg--------ggggtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517365.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH55/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcctcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaattagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaccc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcccgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctatcagcctcgccaagatcgaactaacaccactccccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttaaagcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tgcatcacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaagacgggtgtccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattgaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacggccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggcactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcataagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttgggggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttagacaccacccagctgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgcacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagcggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacagagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccttttttcgctc +acatttgtagggggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517368.1/1-7509 |Norovirus Hu/GII-4/New Taipei/CGMH58/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaattagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcagcc +ggaagaaactaatacggcctttagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgcacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccctttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcttggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgagggtgcagt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcagccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtggtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgatagcgatgtcattatcatcaccactaacctagccaacccagcaccactgggctatgt +taactttgaggcatg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcgg +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cattggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcgagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctactcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacgaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaggaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgaggaaccagctgaaaccatttacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgcccagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacgggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccacgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatggatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaactgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgaaaccaactcgccctggtaaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcagagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgcacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggagaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcgggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaacgaccaa +ttcaagg---ttcccaattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaactatgtcccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaaggtccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactcctcttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +cgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccgctaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccttttttcgctc +acatttgtaggggaggggagtcacg--------ggggtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517369.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH59/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaattagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactagtacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gaa---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatgatgagatccatcgaggatgcagt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tgcatcacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgtccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacggccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggcactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagagggaatgactatgttgtcattggggtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +c-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgagaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcaacagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcaccatgttcccccatat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgactttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacagagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acgaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------gacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517372.1/1-7509 |Norovirus Hu/GII-4/New Taipei/CGMH62/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcctccgcccaacgg------agaggatgaattagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccttaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctagggttcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaagcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctctctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtataagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +agggaaggtcttcgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +taactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcctttagtcctgatttctcacacataaaactgg +cattggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcatcgcccgggcatcagggctactccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaaaggcaatgtgaaagttgacagagttcagagtacttctattcagaccaacaatgagctggctggcgccc +tgcatcacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------tgccaccaacaaggacgggtgtccaaaacccata-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aatctggccgtggcaagaagcacacggccttctcaagtaaaggtctcagtgacgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcgagtactccatagaagagtacctacaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggcactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatttggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagagggaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaagggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcagatttagcaaccatgatccggtgc +gctcgagctttcggaggcctattggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgttggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaaattgacagcaaagctt +aaggaatacggattgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgaccttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagtcaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaagtcaccatgttcccccatat +aatagtggatgctaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcctaactgttgaagaaatgaccaa +ctcaagg---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcgcccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcgaaa---------ctgacacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttctctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggactgcctgctacctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccagtggttattttaggtt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaatagcagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------atcttcaggggcatt---------------------------------g +ccaggaa----------------gagtcagtcccaggactcc------------------------------ +------------------------------catccccgctcggggctccccc------------------aa +cacatcct-----------ctaat------------gcttctactgctactt-------------------- +----------ctttgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtccccctt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagccttttttcgctc +acatttgtaggggaggggagtcacg--------ggggtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517376.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH66/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaagacataatagggaagttgaaacctcttaacatccttaacattctggctgcatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +actagacctcgaggcagttgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgccgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggtcaagaagatcgcggcctccctcacaggggaccagcgcgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcgggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcgccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggctactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacgagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaagcagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcacgatcaagaagtgccagatagtgtacagtggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaggttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaagatgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +gaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgtatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaggatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacgcagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaagtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgagggaaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccggcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacagggaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggagggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaagtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtccacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcagggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcgcctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517377.1/1-7509 |Norovirus Hu/GII-4/Taoyuan/CGMH67/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccactcacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaggaaaccaacacggcgttcagtgtccccccactcaaccaaagagagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcctgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagacctcggtgcatacggactggaaattttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggctactccatgagagactagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtggtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgccgtctcatccgacgacatcaaaactgagggcaagaaaggggagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggccctgaaa +ttaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgtaaaagagttcttc +ggagtccctatcaagcaaacccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcgatgtccttgagcaaacaattgac +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggatctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttgggcccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggactaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaacgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatgcaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccggc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaacgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccaaacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatgattattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcgacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgcccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC517378.1/1-7509 |Norovirus Hu/GII-4/New Taipei/CGMH68/2012/TW ORF1, VP1, and VP2 genes, complete cds +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacggggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagccagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatatggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcgtccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttccggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccattca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccacatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtggcgggtatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaagaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacagggaaattggctgaccaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtgaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacgcttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcgacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaagttggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctacagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacatgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactggaacctgtgttgattcccttacccgatgttgggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagtacaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaatagaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacgacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC463910.1/1-7559 |Norovirus Hu/GII.4/Ohio/684/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +agaagaatctaacacggccttcagcgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagtctcgctaaggttgagctagcaccactccccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagagattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcgtagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgattacgagctacaaggacctgaggacctcgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgccgcgtccaccttgagagcctgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaacgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccttgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataagactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggtc +cagctattaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagggttgggaaacaactcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctatactccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaatacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccgacaagaaaacaacgcaaggaggaaagatcctccctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagccaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatattagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagctgctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagaggggtaatgactatgtggtcattggagtccacacggctgcc +gcgcgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatctcggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccattatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaggatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacctcccattagagttggaatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-tcaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggatgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +aaggagtatgggttaagaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcttaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtggttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatactcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgtcaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---tccaccatcaaattgatagcaatgttgtacacgccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattttctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacaggccccagtagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcactcaaa------------------- +-----cc-----actagtacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaattttcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaatacaa---------------------------aattcaccccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctagcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggccggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttctttccagtttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggattacaacatataatgcaggccgctttcccacccct--------- +ca---------------------actctcgggggcacc---------------------------------a +ccaggaa----------------gagcaaatctcagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcttga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-aaa-t-tgat-----ta-----t------ctttc------------tc----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>KC597139.1/1-7441 |Norovirus Hu/GII.17/C142/1978/GUF, partial genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcgagtgacg---------------gagtgctttctagcat +ggctgtcacttttaagcgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacag +aga---------------------cccccaaggccacctaccccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaaccagtggtt +tcttatagcg----------ccaa---agatggcgtttccggtttgcctgagctttccactgtcaggcagcc +ggatgaaatcaacacggcgttcagtgttccccctctcaaccaaagggagaatagggatgccaaggaaccact +aactggaacaattctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttctg +gagacctgtgtacactcccc---agtatctcatctccccagacactctcaggagactgcacggagaatcgtt +cccctatacagcttttgacaacaattgctatgccttctgttgttgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctaccaagactggaataggaaacccct +ccctactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcgctattcac +caggcccatcaaagacataatagggaagctgagacctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggactccccc +agatgtgtctgcgatgattgcccccttactaggtgattacgagctacaggggcctgaggaccttgcagtgga +actcgttccaatagtgatgggggggattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctgtggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctcttctggcgagaatcgctgctgcacgttccctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgttgttgtgatgatatcaggcaaaccagggatagggaagacccaccttgccag +ggaattggccaagaggatcgcagcctccctcacaggggaccagcgtgtgggtctcatcccacgcaatggcgt +tgaccattgggacgcatacaagggagaaagggtcgtcctatgggacgactatggtatgagtaatcccatcca +tgatgccctcaggttgcaagaactcgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaggtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaggtcgagaaggcga +aacgtgatttcccaggccaacctgacatgtggaagaatgctttcagtcctgacttctcgcacataaaactga +tgctggctccacagggtggcttcgacaagaatggcaacaccccacatgggaaaggcgtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caactctcaccaccttcaactttgaccgcaacaaggtgcttgcttttagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagttggaagacagctcaaggatgtcaggaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtatagtggctgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagtgccactgtgcagaccaataatgaactggccggtgccc +tacaccatctaaggtgcgccagaattagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaagacacagagga--------gactgtcaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgaag---agttcgtcgtttcatccgacgacatcaagactgagggcaagaaggggaagaaca +agactggccgtggcaagaagcatacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagattcgacaga +ggattttcaggccaacaaggaaacagcgcaaagaggagagggcctctctcggtttggtcacaggttctgaaa +tcaggaagaggaacccagatgatttcaagcccaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaaacaaattcagatacacaaatcgggcgaattctgtcgcttgaggtttccaaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaagggaccgtggtcacactactcatcaag +aggccaactggagaacttatgcccttggcagccagaatgggaacccatgcaaccatgaggattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaagagtatggatctaggcaccacacca +ggtgactgtggctgtccctacatttacaagagggagaatgactacgtggtcattggagtccacacggctgcc +gctcgtggaggaaatactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggcggtgac +aataagggaacctactgtggtgcaccaatcttaggtccaggaagtgccccaaaactcagcaccaagactaaa +ttttggagatcatctacaacaccactcccacctggtacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggtccttcattgcaacaagttatgagggaccagctgaaaccatttacagagcccaggggc +aaaccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaaatggtcattcacgcaagcttgcgcgtccctcgacaagaccacctccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaaattggcagatcaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtctacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcatttggaggcctgatggatgaactcaaggcacattgtgttacacttcctgtcagagttggtatg +aacatgaatgaggatggtcctatcatctttgagagacactccagatacaaatatcattatgatgctgattac +t-ctcggtgggattcaacacaacaaagggccgtgttagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccgcacct-ggcccagatagttgcggaagaccttctctcccccagtgtgatggatgtaggtgacttc +aaaatatcaatcaatgagggtctcccctccggggtaccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctctgaagttacaaatctgtcccctgacatcattcaggctaattccctcttt +tccttctatggtgatgatgaaattgtgagtacagacataaagttggacccagagaaattgacagcaaaactc +aaagaatacggattgaaaccaactcgccctgacaaaactgagggaccccttgttatctctgaagacctgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagctca +atacttaggcaaatgtactggactaggggccccaatcatgaagatccatccgaaacaatgataccacactcc +caaagacccgtacaattaatgtctttgctgggcgaggctgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgat +gatggcgtcgaatgacgctgctccatctaa---tgatggtgctacgggcctcgtcccagagatcaaccacga +gacccttcctctggaaccggtggcgggtgcagccattgccgcgcctgtcactggccaaaataatataattga +tccctggattagaacaaattttgtacaagcacccaatggagagttcactgtctcacctagaaactctcctgg +agaaattcttttaaatttggaattgggtcctgatttaaacccatatttggcacacttatctagaatgtacaa +tgggtatgctggtggcgtggaagttcaagtcctcctagcagggaacgcgttcactgc---agggaaaattct +cttcgctgccgtgccaccaaatttcccagttgaattcttgagtcctgcacaaatcaccatgttgccacactt +aatagttgatgttagaacccttgaacctatcatgataccactccctgatgttaggaacaccttcttccatta +caataaccaacctgcc---aaccgcatgcgactggtagccatgttgtatacccctttgagatctaatggttc +cggcgatgatgtcttcactgtttcatgtagagtgctgactaggcccaccccagattttgagttcacatattt +ggtccccccttcagtagagtctaagactaaacccttttctctacctatattaaccatttctgaattaaccaa +ttcaaga---tttcctgcacccatagattcattgtacacagcccaaaacaacaatctcaatgtccaatgtca +aaatggtcggtgcacactggatggtgaactgcagggaaccactcagttgctgccttcaggcatatgtgcttt +caggg-----------------------------------------gcaaattaacagcagatgtac----- +----accaaagccac----------------------------------------------------g---- +-------atgaca----------------------------------gatggcac----------------- +----------------atgcagctgacaaatcttaatgggaccccctttgatccaacagaggatgtgccagc +tccgttaggcaccccagatttcacaggcctcctcttcggagtggcgagtcaga---ggaatg---------- +-----tt-----gtatccaatccaaacaccacc--------agg-----------gcacacgaggctgtgat +ctccacaaccagttcacagtttgtgccaaaattaggatcaatcaactttggta------------gtacaag +tgatgattt---ccagttacaacaacccacca---------------------------aatttacaccag- +--------ttggaatt---aaggttgagagtggac---------atgattttgaccaatgggccctgcccag +atattcaggtcat-ttaacc------cttaatatgaatcttgccccgcctgttgctccaaatttccctggtg +aacagctgttgttctttagatcaaatgttcctt------gtgctggtggcgt------cagtg--------- +--atggtgtcatcgactgtttgttgcctcaggagtggatacagtacttctaccaggagtctgctccctccca +gtctgatgtggcccttatcaggtacgtcaatcctgacacgggtcgcacactcttcgaggcgaaactccacag +aacaggctacatcactgttgctcattcaggtgattatccccttgttgtcccctctaatggatacttcagatt +tgattcttgggtgaaccagttttactcactcgcccccatgggaactggaaacgggcgcaga---------cg +ggtgc---------agtaatggcaggagcttttatagcaggtcttgcaggtgacatgctcaccaacacagtt +ggttcactagtgaatgctgg---aaccaatgccataacccaaaaggtggactttgaaaacaacaaacag--- +------------------------------ctccagtctgcttccttccaacatgacaaagacatgctccaa +gcacaagtggctgccaccaagcagttgcaggctgacatgatcgccatcaaacaggggatattgaccgctggc +ggcttttcccccactgatgcggcgagaggagcagtgggtgcacccatgaccaaggtcctcgattggtccggt +actcgttactgggcgccaaattccacgaggacaactggctactcagggcagttcacatcaacg--------- +cccttgcacacacccacgaaaacaagtcagcctgctcc---------------------------------t +gtcaaaa----------------gaacccaacccccttcttcctcttcag---------------------- +---------------gt--agtatctatagccttccaacacagagtactgtcttgagtaagccttctttcgg +c---tctt-----------ctgtt------------tgttctgcttcaacacaatctacaaa---------- +----------------------------------------------------------------------at +tgagttc--------agtttctt------------------------------------------------c +aatgga---------------------------------------cagaacagtaaattgggt---taatca +gcaaagaagcctcagcccctacatga---gtggtgctctcaacatatctcatgtaacacctccatcgagtag +ggcttcg---agtt------------------------------cgggaa---cagtctcaactgtgcccaa +agaagttttgga-ctcctggacatctgcat------------ttaacacacacagacagccg---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC576909.1/1-7509 |Norovirus Hu/GII.4/NIHIC4.2/2011/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------agatgttttctaacat +ggctgtcactcttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggacgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagccacgccagggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctctcaacatcatcaacatcctggcctcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggccatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcgcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcagactgcaagaactcgctgatacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagtacctccgttcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaggggaagaaca +agactggccgtggtaaaaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaggggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccacttccacctggcacctatgaaccagcctaccttggtggtaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtcttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgacttttctgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactttggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcagatgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---cctaccattaaattgatagcaatgctgtatacaccactcagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccagtcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttggta---------ctgatacaga +taatgactt---tgaaactcaccaaaacacaa---------------------------gatttaccccag- +--------tcggtgtcatccaggatggtgcgaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggaaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggcg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atccgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagcaatctacaacaagcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaactgatgaaagtcaaacagacaatactcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tatccccgcccggggctccccc------------------ag +catatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC576910.1/1-7441 |Norovirus Hu/GII.6/S9c/1976/SEN, partial genome +--------------------------------------------ctttggcagccaa---aactctgtcaat +g------ac----agcactaacaccaccccttctaacaaagaggaggc------tggtgcattctccaacat +taaagttggaattaagaaaa----tgctgggtgccgtgcccaaaaacccc-------------aaggcaccc +agcggtga----------------ccagcactgtcccacggttaagattggacctaaaactttagtgatccc +acc-----------------------------agagcccccaaacgg------tgaagat------gttgtg +cagtttgacg----------cgaagtcggaaactgtgcgtgggattcccgatctgacgacagt---gcaaaa +tgaacatgaaaacaccccatacacggtccctccactgagtgaaagggaacatagaccagccactgagccact +ccctggcacaatactggagatgtgggatggtgagttctaccactactccatctatgtcagcggtggcaaagc +cctgggggtccacaaacccccagcagctataagcctcgcgacaatagagctcacccccatatctctctactg +gcggcctgtctacaccccaa---attatttggtctgtccagacacattgaagggccttgctggtgaaaagtt +tccctacacggccttcagtaataactgctacaacttctgttgctgggtgcttgagctcaatgacacatggct +ttg---cagaagaagcatttccagaaccactggcttcttcaaaccataccagtcttggaacaggaagcctct +cccaaccgttgacgatggaaaaatcaaaaaggtggccaacgcaatcctctgtgcgcttggctcactgttttc +aaaaccaatcaaagaccttttgggaaaactcaaaccactaaacctactacacctactcgcgtcctgtgactg +gacattcgcaggcatagtggagacggtcatcttaatggcggaactcttc---gatgtcttttggactccgcc +agatgtctccaactttatagcctctctgataggtgattttgagctacaagggcctgaggacttggctgtgga +gcttgtccccgtggtcatgggtggcataggaatggtcctcggtttcactgctgagaagatagggcgcatgtt +gtcatctgccgcatcaactctgcgggcgtgcaaagatctggggaactacgccctcgacatactaaaactagt +cacgaagtggttcttcccaaagaaagaagagaaggctgagatggagactttgagggcgattgaggacgccgt +attggacatggaggcgatagggaacaaccacctcacgacgctcctcaaggacaaggacagtctcactgcatt +tatgaagactctagacctggaggaggagaaagcaagaaaactgtcaacaaagtcatcctcgccagacatcgt +cggtaccatcaatgccatattggccagaatagcagctgccagatcccttctacacaaggccaaggaagagat +gtttagcaggattagaccagtggttgtcatgatctcaggcaggcctggtattggcaaaacccatatggcgag +gcatctggctaagagtatagccaacaccatgagtggagaccagagagttgggctcgtccctcgcaacggggt +tgaccactgggacgcctacagaggagagagagtggtcctgtgggacgactatggtatgggaaaccctgtcaa +agatgccttaacattgcaagaactggccgacacctgtccagtcactctaaattgtgacaggattgagaacaa +gggaaagatgtttgacagtgatgtcatcataattacaactaatttggtcaaccctgcacccctcgattacgt +aaattttgaggcttg-ctccagaagaattgacttccttgtttatgcagaatccccagaaatagaaaaggtca +aaagagacttccctggccaacctgatatgtggaaagaccacttcaagccggacttctcacacataaaactga +ccttagccccccagggcgggtttgacaagaatggtaacaccccacatggtaagggtaccatgcggtccctaa +cccaagggtccctgactgcaagagtcgcaggtctcgttcatgagaggagagatgaattccagctacaagggg +atgacctccaaacatacaactttgacaccaacagggtctctgcgttcagaaaactggccgcggataacaagt +atggaatcatggagacaatgagagtgggagcggcactcaagaacgtcaaaactttggaagaccttaaagttg +ccttgaaagatgtgaaattcaatgaatgtgagatcatttacaggaactccaagtaccgagtctcatccaatg +gcaagggcgctgtctctgttgacaaaatcgaagacctcacatctcagactgcaaacgaggtgagctcagccc +tcctcaggctcagacaagcaagggccagatactacgtcagctgcttccaggaccttgtctacaccctcatac +aggttgctggggcttcattcgttgtca---------------atagga------tctcgaagaggttctgct +gggaaaggtgggttaagccgaccgagac-------------tcaggaaacgaatgagcccga-----gaagg +aaactgcccaaggta---gatgggagattgaacccaaggatgcagaaccagaaggtaaaaagggcaaaaaca +agaaaggaagaggcaagaaacacacagccttctccagtaagggcttgagtgatgaagagtatgatgaattca +agaggatcagggaagaaagaaacgggaagtattccattgaggaatatctgcaggaccgggatcgttac---t +acgaagaagtagcggtcgcccgtgcaacagaagaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccaacaaggaaacagaggaaagaagagaggggggtgcttggcctggttactggctcggaca +tcagaaagaggagaccagatgacttccagccaaagggtaacttgtgggcagatgacaccagaagtgtggact +ataacgaaaggcttgactttgaggcccctccaagtgtgtggtcaaggatagtcccactgggcaccggttggg +gtttttgggtctcat-ccaacctccttatcacaacaacacatgtcctacctaagggcatcaaggaactcttt +ggagttgatgtcaaacaaatccaaattcataaatctggagagttttgcaggttcagattcccgagaccaatc +aggccagacgtctcagggctcgtgttggaagagggcgcaccagagggtaccgtctgctctgtactcgtgaag +agatcaacaggtgagatgatccctctggcagtaaggatgggtacacatgcatccatgaaaatccagggcagg +actgtcggtggccaaatggggatgcttctcacaggagcgaacgcaaagaacatggatcttggcaccggtcca +ggtgactgcggttgtccttacatctacaaacgcggtaatgacataattgtggcaggtgtccacaccgcagca +gcccgagggggcaacactgtcatctgcgccacccaagggcaggatggggaggcagtccttgaagggaatgag +aatcttggcacgtactgcggtgccccaattttaggtcctggcaaagcgcccaagctcagcacgaaaaccaaa +ttttggcgctcgtcgccggatgccctgccacctggcacatatgagcctgcttacctgggaggcaaggacccc +agagtggagaaaggaccctccctacagcaagtcatgagagaccagttaaaacccttcacggagcccagaggc +aaaccaccaaggcccacagtcctagaagaggctaaaaagacagtgatgaatgtcctagaacaaaccattgac +cctgctaaaccatggacctactcacaagcatgtgcctccctggacaagaccacttccagtggtagccctcac +cacgtcaagaaaaatgaccattggaatggagagtctttcactggcccccttgcagatcaagcgtccaaagcc +aatcttatgtatgagcaggccaaacacatgcagcccgtgtacacggctgcactcaaagatgagctcgtcaag +actgataaaatctataagaagataaagaagaggctcctttgggggtcggatctgggcacaatggtcagatgt +gccagagcttttggtggcctcatggacagcatgaaagcaagctgcataaccctcccgtgcagggtaggtatg +aacatgaatgaggacggacccatcatctttgacaagcactcaaaatacaggtatcactatgatgctgactac +t-ctaggtgggattcaactcaacaaaggagcatcttgtctgccgctatggaagtgatgg-tgcggttctctg +cagaaccagaact-ggcacaagtggttgcagaagaccttctagcacccagccaactagacgttggtgacttt +gtcatctcagtccaggaaggtttaccatcaggagtcccatgcacatcacaatggaactcgatagcgcattgg +attttaaccttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgtttc +tccttctatggtgatgatgagattgtgagcactgatattaaccttgacccttcaaaactgacacagaaactt +agggagtatggtctggtccccacccggcctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctaacgttcctacgtaggtcgattgcacgggacccagctgggtggtttggaaaactggatcaagactca +attctcagacagttgtactggacaagagggcccaatcatgaaaacccatatgagagtatggtcccccactct +cagcgggccacacagctcatggccctccttggtgaagcttcattgcatgggccccagttttacaagaaggtc +agcaagatggtcatcagtgaaattaagagtggtggtctggagttttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtctcaccaaggaattcgcctgg +tgagatgcttttaaatcttgagttgggcccagaacttaatccctatttaagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccctgtagaaaacatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacaacttgaaccagtgcttctgcccctccctgatataaggaacaggttcttccatta +caaccaagagagcacc---ccccggatgaggcttatagccatgctttatacacctctgagggc---caattc +tggtgaggacgtgttcactgtgtcctgcagggttttgactcgtcccgctccagattttgagttcacattttt +agtgccaccaactgttgaatcaaagacaaaacctttcactttgcctattctgacccttggtgagttgtctaa +ttctcgc---tttccggctgctatagatatgctttatactgatcctaatgaatcaatagttgtacaacccca +aaatggtaggtgcactcttgatggcaccttgcaaggcacaacacaattggtccccacacaaatttgtgcctt +tagag-----------------------------------------gcactctgatcagccag--------- +----------accgcgagagcg------gc----------------------------cgactcaacag--- +--attccccccag--------agagcccgtg----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacaatacgacccaacggatgatatacctgc +agtcctgggggctattgacttcaaaggtacagtttttggagtggccagtcaaa---gggatgtctctgggca +-----ac---aagaacagggccactatgccacc--------cga-----------gcccatgaagcacacat +tgatacaactgacccaaagtatgcacccaaattaggcacaatccttat---ta---------aatctgaatc +taatgattt---tactacaaatcagcccatta---------------------------ggttcactccgg- +--------tgggcatgggtgaca---------------------acaattggagacagtgggagctacctga +ttattctggtaga-ttaact------ttgaacatgaacctcgctcccgctgtttctccgtctttccctggtg +aacgaattcttttcttcaggtctatagtaccat------cagccggaggctt------cggat--------- +--ccggttatatagactgtctcatacctcaggaatgggtacagcacttctaccaggaagcagcgccttcgca +atccgctgttgccctggttagatatgtcaaccccgacactgggcgtaacatctttgaggccaagttacatag +agaagggttcctcaccgtggctaactctgggaacaatcctattgtggtcccccccaatggttattttagatt +tgaagcttgggttaatcagttttatacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcaggattagcaggtgatgtcgtgtcgaacggcatc +ggatcccttatcaatgcagg---tgctaatgcagttaatcaaaaagtggagtatgactttaacaagcaa--- +------------------------------cttcagatggcatcattcaagcacgacaaggagatgctacaa +tcacaggtgttggcaaccaaacaactgcagcaggagatgatgaacataaggcaaggggtgttgaccgctggc +ggcttctcccccgccgatgctgctaaaggggctgttaatgccccaatgacgaagattctggactggaatggc +acaagatattgggcaccaaacagtatgaaaaccacaagctattcagg-acagttttctagcagccctgttca +ta-----------gatcctttgctaccccccagcatactgctcc---------------------------a +ccaa-------------------agggcaagttgcaa----------------------------------- +----------------------------------------------------------------------gg +tgattctg-----------ctagtgtgtacagttctccctctaccatttcttcac----------------- +---------------------aatcaaccca---ttcaacagcgctgtctg-------cagg--------aa +ctgggtc----g---tccag-------------------gtccacctccacgt---------ccacagcaac +ctctac-------------------ctt--------------gtctagaaccagcgagtgggtcagaggaca +gaatgaaaggcttagcccgtttatgg---atggtgctctccaaactacctttgtcacaccaccatcgagcaa +ggcttca---tcaa------------------------------atggga---cggtgtcaaccgtgcccaa +agctg-tttgga-ctcctggactcctatgt------------tcaatacgcataggcagcctctcttcgccc +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC576912.1/1-7509 |Norovirus Hu/GII.4/NIHIC4.1/2011/USA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------agatgttttctaacat +ggctgtcactcttaaaagag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggacgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagccacgccagggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaggttaaggcctctcaacatcatcaacatcctggcctcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaagaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcttaaagttagt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggccatggtgagatccatcgaggatgcggt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcgcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcagactgcaagaactcgctgatacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaaaggcaatgtgaaagttgacagagtccagagtacctccgttcagactaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaggggaagaaca +agactggccgtggtaaaaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaggggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccacttccacctggcacctatgaaccagcctaccttggtggtaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtcttatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgacttttctgcggagaactgtgacccgcgaccctgctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaggagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaagtaactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactttggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcagatgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---cctaccattaaattgatagcaatgctgtatacaccactcagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatatttct +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccagtcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggagaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagagattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttggta---------ctgatacaga +taatgactt---tgaaactcaccaaaacacaa---------------------------gatttaccccag- +--------tcggtgtcatccaggatggtgcgaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggaaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggcg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atccgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcataccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagcaatctacaacaagcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaactgatgaaagtcaaacagacaatactcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tatccccgcccggggctccccc------------------ag +catatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC576915.1/1-7064 |Norovirus Hu/GII.4/KL45/1978/MYS, partial genome +----------------------------------------ctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacatccg-cccccgagggagataccacaa +aga---------------------cctccacgaccgcccactccggagttgatc-------aagaaagtccc +tcc-----------------------------ccccccacctaacgg------ggaagaggaaccagtggtc +tcttataacg----------tcaa---ggatggcgtttctgggttgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccctccactcaaccaaagggagaacagggatgccaaggaaccact +aactggaacaatcctggagatgtgggatggggagatctatcattatggcttgtatgtggaacgaggcctggt +gcttggcgtgcacaaaccgccggcagccattagcctcgctaaggtcgaattaacaccactctctttgttctg +gagacctgtctacactcccc---agtacctcatctccccagacaccctcaggagattgcatggtgaatcctt +cccttatacagcctttgacaacaactgttatgccttttgttgctgggttttggacctgaacgattcatggtt +gag---caggaggatgatacagaggacaactggcttcttcaggccttaccaggattggaacagaaaacctct +tcccaccatggatgattccaaattaaagaaagtggccaacatattcctgtgtgctttgtcttcactattcac +tagacctatcaaggacataataggaaagctaagacctcttaatatcctcaacattttagcttcatgtgattg +gacctttgcaggtatagtggaatccctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactacgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtggtaatggggggaataggtttggtgctagggttcaccaaagagaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaggatcttggcgcatatgggctggagattttaaaactagt +catgaaatggttcttcccaaagaaagaggaggcgagtgaattggccatggtgagatccatcgaggacgcagt +gttggacctcgaagcaattgaaaacaaccatttgaccaccctgctcaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaaactttcaaccaagtccgcctcacctgacatcgt +gggtacaatcaacgctctcctggcgaggatcgcggctgcccgctccctggtgcatcgggcaaaagaagaact +ttccagcaggccaagacccgttgtcgtgatgatatcaggaaaaccagggatagggaagactcaccttgccag +agagctggctaagaagatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccattgggacgcgtacaagggagagagggtcgtcctttgggacgactacggtatgagtaaccccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactgaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccaccaacctggccaacccagcgccactggactatgt +caattttgaggcatg-ctcgaggcgcatcgatttcctcgtgtacgccgaagcccctgatgttgagaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaatgcctttagccctgacttctctcacataaagctaa +tgctggccccgcagggtggttttgataagaatggcaacaccccacatgggaagggtgtcatgaagaccctca +ccaccggttccctcatcgcccgtgcttcaggactcctccatgagaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcaggcagcttgccgctgaaaacaagt +acgggttgatggacacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaaacaag +cactcaagaatatctcaattaagaagtgtcagatagtgtatggtggcagcacctacacgcttgaatctgatg +gtaagggtagtgtgagggttgacaaagttcagagtgccaccgtgcaaaccaacaatgaactagccggcgccc +tgcatcatctcaggtgcgctaggatcaggtactatgttaagtgtgtccaggaagccctgtattccatcattc +aaattgcaggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaaaccacaactggaggacacgggaga--------agccactagcaaagacggatgcccaaaacccaaa-- +-gat----gaagagg---agtttgttgtctcatccgacgacatcaaggctgagggcaagaaagggaagaaca +agtctggtcgcggcaagaaacacacagccttctcgagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaattagggaggaaagaaacggcaagtactctatagaggagtatctccaagacagagacaagtac---t +atgaggaggttgccatcgccagggcgactgaagaggacttctgcgaagaggaagaggccaagatccggcaga +ggatctttagaccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggctctgaga +tcaggaaaaggaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagctttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggctggg +gtttctgggtttctc-ccagtctgttcataacgtcaactcatgttataccccagggcacacaggagttcttt +ggagtgtccatcaagcaaatccagatacacaaatcaggcgagttctgtcgcctgcggttcccaaaaccaatc +aggactgatgtgacgggtatgatcctagaggagggtgcccccgaaggcactgtggccacactactcatcaag +agaccaactggcgagctcatgcctttagcagccagaatgggcactcatgcaaccatgaaaattcaaggtcgc +actgttggaggccaaatgggtatgctcctaacagggtccaacgccaaaagtatggacctgggcaccacacct +ggcgactgcggttgtccctacatttacaagagagggaacgactacgtggtcatcggggttcacacggctgct +gcccgaggggggaacactgtcatatgtgctacccaggggagtgaaggtgaggccacacttgagggcggtgac +aacaaaggcacctactgtggtgctccaatcctaggtccaggaagtgccccaaaactcagcactaaaaccaaa +ttctggaggtcgtccacagcaccactcccacctggcacctatgaaccagcatacctcggtggtaaggaccct +agagtcaagggtggtccttcactacaacaagttatgagggaccagttgaagccattcacggaaccaaggggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaactattattaatgtccttgaacaaacaatagac +ccacctcaaaaatggacatttgcacaagcttgcgcgtcccttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggggattcctttacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggagggaaagaacatgactccagtttacacaggtgcccttaaggatgagttggtcaaa +actgacaagatatatggtaagatcaagaagagactactctgggggtcggacctggcaaccatgatccggtgt +gcccgggcattcgggggcctaatggatgagctcaaggcccactgtgtcacgcttcctgtcagagttggaatg +aacatgaatgaggatggccccatcatctttgaaaagcactctaggtatagatatcactatgatgcagactac +t-ctagatgggattcaacacaacaaagagctatattggctgcagccctagaaatcatgg-ttaaattctccc +cagagccacactt-ggcccaggtagttgcagaagacctcctgtcccctagcgtgatggacgtgggtgatttt +aagatttcaatcaacgagggtctcccctctggggtgccctgcacttcacaatggaactctatcgcccactgg +ctcctcaccctctgtgctctttctgaggttacggatctttcccctgacatcgttcaggccaattctctcttc +tccttctatggtgatgatgagattgtgagtacagatataaaattggacccagaaaaattgacggcaaagctg +aaggaatacggactgaagccaacccgccctgacaagactgaagggcctctgatcatctctgaggatttaaat +ggtttgaccttcctgcgtaggaccgtgacccgtgatccagctggttggtttggtaaattggaacaaagctca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagctgatgtctttgctgggtgaggctgcattgcacggcccaacattctacagcaagatc +agtaaactagtcatcacagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcggacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtcctcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacctgttgttggtgctgctatagcagcacctgtggcaggtcaacaaaatataattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactgtggagcgcgcctctgagccctgatttgaacccctatctctctcacttatctagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgattcttgcggggaatgcgttcaccgc---gggaaagatcgt +gtttgctgctgtcccacccaattttccaactgaaggtctgagtcccagtcaagtcacaatgtttcctcacat +aatcgtggatgttaggcaattggaacctgtgctgatccccttaccagatgttagaaataacttctaccatta +taatcaagcaaatgat---tccaccctgaagttgatagctatgttatacacaccactcagggctaacaatgc +cggggatgatgttttcactgtctcttgtcgagtccttacaagaccatctcctgactttgattttattttcct +ggtcccacccacagtcgaatcaagaaccaaaccattcactgtcccagtacttactgttgaagagatgactaa +ttcaaga---tttcctatccctctagaaagattatttacaggccccagcactgcttttgttgttcagcccca +aaatggcagatgcacaactgatggcgtccttcttggcaccactcagttgtcggctgtcaatatctgtaactt +cagag-----------------------------------------gggaagtcaatcaca----------- +-----------ttgccgg------------------------------------------------ta---- +-------ctcacg----------------------------------attacacc----------------- +----------------atgaggctaacttctcagaattggaacaactatgacccaacagaagagattccagc +ccctcttgggaccccagactttgtagggaggattcaaggtgtgctcactcaga------------------- +-----cc-----accagaagtgatggctcgacc--------cgc-----------tcccacaaggccacagt +gagcacggggagtgttcacttcactccaaaattgggcagtgttcagttcacca---------ccgacacaac +caatgatct---taatgctgggcaaaacacaa---------------------------aattcaccccgg- +--------tcggtgtcgagcaaaccagcggcga---ccaccaaagtgagcctcaacaatggacactcccaaa +ttactcaggtact-ccaaat------cataatgtgcatttggcccccgctgttgcgcccactttcccgggtg +aacagctgcttttctttaggtccactctacctg------ggtgtggcgggta------cccta--------- +--atatgaatctggactgcttgctcccccaagagtgggttttgcacttctaccaagaagctgccccagcaca +atctgatgtggccttgctgaggtttgttaacccagacacaggaagagtgttgtttgaatgtaagctccatag +atcaggcttcatcacagtggcccactctggttcacatgacttggttattccccctaatggttatttcagatt +tgattcctgggttaatcagttttacactctcgcccccatgggaaatgggtcggggcgtaga---------cg +ggtgg---------tataatggctggagctttcttcgctggattggcatctgatgtcctcggttctggtctt +ggttctctaatcaatgctgg---agctggggccataaaccaaaaggtggaatttgagaataatagaaaatta +caacaagcttcctttcaatttagcagtaatttgcaacaggcttcttttcaacatgacaaagaaatgctccag +gctcaaattgatgctacccacaaattgcaacaaggtttaatgcagatcaaacaggcagtgctcctagagggt +gggttttccgcggcagacgccgctcgcggggcgatcaatgcgcccatgacaaaagccctggattggagtgga +actaggtactgggctcccgaggccagagtcacaacatacaatgcaggccacttt------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409238.1/1-7511 |Norovirus Hu/GII/10101/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggct +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcagatattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgctcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccactccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409239.1/1-7511 |Norovirus Hu/GII/10127/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcacactttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409240.1/1-7511 |Norovirus Hu/GII/10370/2010/VNM, complete genome +------gaatgaagat---ggcgtccaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctagaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cgctcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggatt +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcccaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgct +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaagccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacccgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttgactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ctactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagtcaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409241.1/1-7511 |Norovirus Hu/GII/10405/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataagacctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgagaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggagtccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +aaaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcactaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccagtcttccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtaagcacagacataaaattggacccggaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgaccgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------gcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409242.1/1-7509 |Norovirus Hu/GII/10406/2010/VNM, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaatcctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagttacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacaacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacggctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccatactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaacttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagcgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacactggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggttaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccattaatcaaaaagttgaatttgaaaataacagaaaattg +cagcaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtat-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409243.1/1-7509 |Norovirus Hu/GII/10411/2010/VNM, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggttactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggatcagagaagaaaggaacggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggcccactggggaactcatgcccctagcagctaggatgggtacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggatctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggagcagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagagacattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccctactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatcctgacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgcttctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggtact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409244.1/1-7511 |Norovirus Hu/GII/10420/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggagaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcgggcgagttttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409245.1/1-7511 |Norovirus Hu/GII/20048/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcctttagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctaaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ctagcctatttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggggcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaacggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgtt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409246.1/1-7511 |Norovirus Hu/GII/20064/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409247.1/1-7511 |Norovirus Hu/GII/20079/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacactgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggcattcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggtttttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagctttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaacggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcagatagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttattcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------at---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409248.1/1-7511 |Norovirus Hu/GII/20107/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---gaagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409249.1/1-7511 |Norovirus Hu/GII/20108/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409250.1/1-7511 |Norovirus Hu/GII/20144/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggccgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagagtagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtctcgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaggacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctgaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaagtttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatactccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaattcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcatag +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgttcttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctagggccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcggggacgct---------------------------------a +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409251.1/1-7511 |Norovirus Hu/GII/20146/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattgcctgagctttccaccgtcaggcaacc +ggaagaagccaatacggcctttagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaactattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtatctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctgttcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacgtcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctaaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaattttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ctagcctatttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggggcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--atatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaacggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcgtt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409252.1/1-7511 |Norovirus Hu/GII/20150/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcatcgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacacctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ttaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409253.1/1-7511 |Norovirus Hu/GII/20151/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaagccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcggaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgtcaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------atcttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtcacccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409254.1/1-7511 |Norovirus Hu/GII/20153/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaatatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409255.1/1-7511 |Norovirus Hu/GII/20154/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggcgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatctatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagtcgacagaatccagagcacctccgtacagaccaacaacgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcactacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgatttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggatcagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacatct-ggctcaggtggtcgcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctataaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgcggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcgtaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409256.1/1-7511 |Norovirus Hu/GII/20156/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gaa---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatcgtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcgccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agggtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaggctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggatgagttagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggagatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaagttgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttgttgttcaaccaca +aaatggtaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagca---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccgcccct--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409257.1/1-7511 |Norovirus Hu/GII/20159/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409258.1/1-7511 |Norovirus Hu/GII/20161/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaagcccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatacgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttggtagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccataacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409259.1/1-7511 |Norovirus Hu/GII/20162/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccagcaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +accaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +caacaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409260.1/1-7511 |Norovirus Hu/GII/20164/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactattggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaagccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcggaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409261.1/1-7511 |Norovirus Hu/GII/20171/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcttggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcgcctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409262.1/1-7511 |Norovirus Hu/GII/20172/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcatatcttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcagggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatgc-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409263.1/1-7511 |Norovirus Hu/GII/20173/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttctggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgactg +gactttcgcaggcatcgtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggggctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccacgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgcggtgcgccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggatgagttagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggagtatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccctgctgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagaattcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggagcctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttgttgttcaaccaca +aaatggtagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgcg----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctattaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggcctcctcc------------------ag +tatatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409264.1/1-7511 |Norovirus Hu/GII/20176/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagacgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409265.1/1-7511 |Norovirus Hu/GII/20180/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +cggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409266.1/1-7511 |Norovirus Hu/GII/20182/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacccggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcggaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttaccgtcccaatcttaaccgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacagacaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccagaactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409267.1/1-7511 |Norovirus Hu/GII/20184/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcttggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcgcctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagtttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409268.1/1-7511 |Norovirus Hu/GII/20185/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcatcgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409269.1/1-7511 |Norovirus Hu/GII/20187/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaaatagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatttaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttaat +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaattaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacttatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcgcaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggcgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggatcacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409270.1/1-7511 |Norovirus Hu/GII/20189/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaagtttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggattggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409271.1/1-7511 |Norovirus Hu/GII/20190/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgctaccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgtcgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggttattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattaacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgattctcgcgggaaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagacggctcgacc--------cgt-----------ggccataaagctacggt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctatacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaattatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409272.1/1-7511 |Norovirus Hu/GII/20192/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccatctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcaaaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaacgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcgggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgacgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409273.1/1-7511 |Norovirus Hu/GII/20196/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +taactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacactcgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacgaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgcggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409274.1/1-7511 |Norovirus Hu/GII/20198/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggta-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgccagggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacgaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409275.1/1-7511 |Norovirus Hu/GII/20202/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---ggatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcacctctggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattga +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccaccaggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgctcgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccgtctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409276.1/1-7511 |Norovirus Hu/GII/20205/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------ggatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcttggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-aat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaaggtaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggatcacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409277.1/1-7511 |Norovirus Hu/GII/20206/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaagatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcgacctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagacgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataataggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409278.1/1-7511 |Norovirus Hu/GII/20208/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtctacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctatcattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacaccccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gaa---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatcgtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttactcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagcatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggtcgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcattc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcattacatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaaatactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggctccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcctgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagtggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcgccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agggtcaagggtggcccctcgctgcagcaagtcatgagagaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaggctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcgctcaaggatgagttagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctatgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttaaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgataccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggagatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +attcgcagcagttccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaagttgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggccccagcggtgcctttgttgttcaaccgca +aaatggtaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagca---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatgtc------cacaatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccgcccct--------- +ca---------------------accctcggggtcatt---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtctcctcc------------------ag +tacatcct-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409279.1/1-7511 |Norovirus Hu/GII/20215/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgacttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaggaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaatatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatatactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccctttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409280.1/1-7511 |Norovirus Hu/GII/20217/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccattaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgccag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgtaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatttaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcatcgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctatctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaagaagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaaattcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaattccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409281.1/1-7511 |Norovirus Hu/GII/20229/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggagatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttagtagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtattagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacctagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgagtcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgttatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcgca +atctgatgtggctctattaagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggatgct---------------------------------g +ccaggaa----------------ggatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacgtctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409282.1/1-7511 |Norovirus Hu/GII/20230/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttagacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattacggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcattaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgaggacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgctgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaagcagctcaaggaagtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaggagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagtatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttgggggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +cacgtgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcctctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +agggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaactccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cacaatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaaccagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccttaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaatgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409283.1/1-7511 |Norovirus Hu/GII/20233/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcgattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaaacctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------ggatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409284.1/1-7511 |Norovirus Hu/GII/20248/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacaaaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggatt +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccgccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtcctcgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgataagaccacttctagcggccacccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaagct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaacgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttaccccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggtcaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgctcccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgacgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409285.1/1-7511 |Norovirus Hu/GII/20258/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaca-- +-gat----gatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgtaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacccttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctacggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaagtttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409286.1/1-7511 |Norovirus Hu/GII/20263/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaagt +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccatattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggtcaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccatagccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatatttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgcgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggccttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ctagaaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409287.1/1-7511 |Norovirus Hu/GII/20271/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +gactgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagacgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccaaagaaggaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcgattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattga +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaaacctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatttgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaagtgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------ggatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409288.1/1-7511 |Norovirus Hu/GII/20276/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaagt +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagagcttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccatagccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatggccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccagaaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcagacagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409289.1/1-7511 |Norovirus Hu/GII/20302/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggagatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaattaacaccactctccctgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgttatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +cagacccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +tctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgcagctgaaaacaaat +atgggttagtagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgattggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggagccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcctaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaagttccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgttatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcgca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggatgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatttgtcacccttcatga---ggggggctcataatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409290.1/1-7511 |Norovirus Hu/GII/20344/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaagt +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtgcagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggagctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccacccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccgtttactgtcccaattttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggtgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctggggactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccagaaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcctctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409291.1/1-7511 |Norovirus Hu/GII/20350/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------gaatgctttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagcgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcactcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccactttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatgtgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattctggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409292.1/1-7511 |Norovirus Hu/GII/20357/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------ttaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +tactggaacgattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggatcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgctgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacatacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgacgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaattagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagtcgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacctacagtcgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409293.1/1-7511 |Norovirus Hu/GII/20365/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattga +cactggctccacaaggtggctttgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaccttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------atattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaggagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaagggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaaggcccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgttgtacacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtccttactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +catatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409294.1/1-7511 |Norovirus Hu/GII/20373/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggacgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccactgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttggtagacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaaaaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatcaggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaaggacgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtggaggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaaccaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccaggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccgtctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409295.1/1-7511 |Norovirus Hu/GII/20407/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcgtctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggacctcgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcacagagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctctctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggct +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagctcctccgtacagaccaacaatgagctggctggtgccc +tgcatcacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcagatattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgctcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggtggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgcggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtagg---------cg +tgcct---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaagtttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409296.1/1-7511 |Norovirus Hu/GII/20413/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcgtctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggacctcgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctctctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggct +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagctcctccgtacagaccaacaatgagctggctggtgccc +tgcatcacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcagatattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgctcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggtggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgcggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtagg---------cg +tgcct---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggtta--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaagtttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409297.1/1-7511 |Norovirus Hu/GII/20424/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcgcacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacgcagagga--------ggccaccgacaaggacgggtgcccaaaacccaaa-- +-gat----gatgggg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtctccatcaaacaaattcaggtgcacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggtgtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------taggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagattcgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctatacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gctcccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409298.1/1-7511 |Norovirus Hu/GII/20448/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcgtctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggacctcgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccagggataggaaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctctctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggct +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagctcctccgtacagaccaacaatgagctggctggtgccc +tgcatcacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcagatattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagagactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgctcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgcggcgcaccaatcctaggcccagggggtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atacttaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------actacaca----------------- +----------------atgaacttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgttgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaatggaacggggcgtagg---------cg +tgcct---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggagacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaagtttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409299.1/1-7511 |Norovirus Hu/GII/20457/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctggcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataagacctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaggagtacgatgagtaca +aaaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacttatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccagtcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgtaagcacagacataaaattggacccggaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaagg---ttccccattcctttggagaagttgttcacgggccccagtaatgcctttgttgttcaaccaca +aaacggcaggtgcacgaccgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtgcacctggcccctgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggagatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggccac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgttcgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409300.1/1-7511 |Norovirus Hu/GII/20460/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagtagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctacggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggatcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccgacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagttgggcagtgttcaattcagta---------ctgacacaga +agatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409301.1/1-7535 |Norovirus Hu/GII/20469/2010/VNM, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctaacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgctgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagacataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactaccagctgcaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaaggagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagtatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaagagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgactatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggggtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaacgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcattatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccccctgggaactccagatttcgtggggaagattcagggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggcacacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcgatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtatgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----aa-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409302.1/1-7533 |Norovirus Hu/GII/20477/2010/VNM, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactgggacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagagattggatgaattcgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatgggaacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggttattggggttcacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggtaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttggttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaggcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattttacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gccgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaattaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaatgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409303.1/1-7511 |Norovirus Hu/GII/20478/2010/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------ctcccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttacagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggagatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggaaagggtcgttctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgcgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggttactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaagcctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaatgagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcactgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccacgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatctatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaataatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggag----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgttct-----------ctaac------------tcttccattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409304.1/1-7511 |Norovirus Hu/GII/30017/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttctaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gtttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcccataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409305.1/1-7511 |Norovirus Hu/GII/30026/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaaacagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatccctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattag +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggggtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtaatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------gactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409306.1/1-7511 |Norovirus Hu/GII/30040/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409307.1/1-7511 |Norovirus Hu/GII/30045/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttctaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gtttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409308.1/1-7511 |Norovirus Hu/GII/30112/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccattgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcactcaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggaaccacccaccgaaatgaaccccaacaatggatgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tatgatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgtt---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------tag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgggtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409309.1/1-7511 |Norovirus Hu/GII/30113/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaatgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggagatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttctgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgagaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaataaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +gggtctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgtcgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctgggttggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409310.1/1-7511 |Norovirus Hu/GII/30129/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggagatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttggtagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgttatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggatgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409311.1/1-7512 |Norovirus Hu/GII/30199/2009/VNM, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtc +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgccctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaaaaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggccccttaacatcctcaatatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctagcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactacgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctacttcatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggatacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatacttcgatcaagaagtgccagatagtgtatagtggcagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccattatcc +agattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacttatggt +ctaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaacggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagctttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagagctcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggaccagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacagacaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggtctaatggacgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcaccctctgtgcgctctctgaagttacaaatttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtaacccgcgacccagctggttggtttgggaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagtcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcaccatgttcccccacat +gatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtctcttgtcgggttctcacgaggccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgatct---tggtgccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttctttagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttactgtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcgt---------tataatggctggagctttctttgctggattggcatctgacgtcctgggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcagcatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaattaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggga----------------gagctaaccttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctct------------------ag +cacatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggcgtaatgt----------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409312.1/1-7511 |Norovirus Hu/GII/30201/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggagaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattaatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409313.1/1-7511 |Norovirus Hu/GII/30206/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacaccctcaagagattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctgggatttaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaaatgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaagtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatttgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaacttaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggcaaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaataat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaaacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatctggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgactttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttagactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggatccc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tgcagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409314.1/1-7511 |Norovirus Hu/GII/30207/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggagaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccaccaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409315.1/1-7511 |Norovirus Hu/GII/30211/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccaccaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagtagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctacggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggatcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccgacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagttgggcagtgttcaattcagta---------ctgacacaga +agatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttccattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409316.1/1-7511 |Norovirus Hu/GII/30212/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggagaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcgggcgagttttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409317.1/1-7511 |Norovirus Hu/GII/30257/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaacctct +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttctttagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaagttaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtacttgccttcagacagcttgcagctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagcttgctggcgccc +tgcatcatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctatattctatcatcc +agattgctggggccgcatttgtcaccacgcgcattatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccgaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctcac-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtaaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaggtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgatttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttatccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagacaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaagaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttgctccaaaactgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgttcgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccctaatggctattttaggtt +tgattcttgggtcaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgcttcaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaattcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>KC409318.1/1-7511 |Norovirus Hu/GII/30266/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccacttaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggagaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggtacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccggggataggaaaaactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcgggcgagttttgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactgctcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgcct---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX989073.1/1-7557 |Norovirus Hu/GII.4/GZ2010-L26/Guangzhou/CHN/2010, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgaactttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagagtagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccctgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggacctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +cagacccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gaccttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctggggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcactaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaagaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaactggtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcatcgccagggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataagt +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcaaaaccatgccggaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgtacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactacgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgaaaaactcagttttgaggctccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcccccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +aataagggaacatactgtggcgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcaccctccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaggaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataagactgagggacctcttgttatttctgaagatttagat +ggcttgaccttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggtcctaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggcgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaaccaaaccatttactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acgaaaggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-gatatc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggcagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattcgctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgcttttccacccct--------- +ca---------------------atctccgggggtact---------------------------------g +ctaggaa----------------gagccaatcccagaactcc------------------------------ +------------------------------tacccccgctcggggctctccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtttcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>JX989074.1/1-7559 |Norovirus Hu/GII.4/GZ2010-L87/Guangzhou/CHN/2011, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaaactaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgcttggtgactacgagctacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgaaagcttgtaaagaccttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaacgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccgcgcaatggcgt +cgaccattgggacgcgtacaagggggagagggtcgtcctatgggacgattacggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccacctttaattttgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaaggatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacaggatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcactacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggatggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +accgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatttacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccctcactgcagcaagtcatgagggagcagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagacaacttccagtggtcatccgcac +cacatgcggaagaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgtacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaggagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +taatcaatcaaatgac---tccaccatcaagttgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaaccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcagtttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagcttctcttctttagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccacaaaaaagttgcaacaggaaatgatgagagtcgaacaagcaatgctcctagagggt +ggatcctctgagacagatgcagcccgtggggcaatcaacgcccccaagacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcacc---------------------------------a +ccaggga----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttct--------------------------------------------- +------------------------------------------------------------------------ +- +>JX989075.1/1-7550 |Norovirus Hu/GII.6/GZ2010-L96/Guangzhou/CHN/2011, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccaacagagaagaggt------tggtgcattttccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacact-------------aaagcgccc +agcggaga----------------ccagcactgccccacggtcaagatcgggtccaaaacactagtgatccc +gcc-----------------------------ggaacccccaaacgg------cgaggat------attgta +cagttcgacg----------caaaatcagaaactgtgcgtgggctacccgacctgacgacagt---gcagaa +tgaacatgagaacaccccgtacacagttcctccactaagtgaaagggaacacaggccagccgctgagccact +ccccggcacgatactagagatgtgggacggtgaattctaccactactccatctacgtcagcggaggcaaagc +cttgggggtgcacaaacccccagcggctataagcctcgcgacagtggagctcactcccatatccctttactg +gcggcctgtctacactccaa---actacctggtccatccagacacactgaagggccttgctggagaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgctgggtacttgagcttaacgacacgtggct +ttg---caggaggagtatatccaggaccaccggcttcttcaagccatatcagtcttggaacagggagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcacttggctcactattctc +aaagccaatcaaagacctactgggcaaactcaagccactcaacctgctacatctgcttgcgtcgtgtgattg +gacgtttgcaggtatagtagaaacagtcatcttgatggcggaactcttt---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttggtgggtgattttcagttgcaaggacccgaggacttggctgtgga +gctggtccccgtggttatgggaggcatagggatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgccgcgtcaactctaagggcatgcaaagatctagggaactatgccctggacatactgaagctagt +tatgaagtggtcctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggacgccgt +attagacatggaggcaatagggaacaaccacctcacaacactcctcaaggacaaggacagcctcactgcatt +catgaaaaccctagacctagaggaggagaaagcaaggaaattgtcaacgaagtcatcatcaccagacatcgt +cggcaccattaacgccatactggctagaatagcagccgctagatccctcctacacaaggccaaggaagagat +gttcagcagaattagaccagtggttgtcatgatttcaggtagacctggcattggtaaaacccatatggcaag +gcatctggctaagagcatagccaacacaatgagtggggaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggatgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgttaa +agatgccttgacactgcaagaactggccgacacctgtccagtcaccttgaattgtgataggattgaaaacaa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttgatcaaccctgcacctcttgattatgt +taacttcgaggcttg-ctccagaagaatcgacttccttgtctatgcagagtcaccagaaatagaaaaggtca +agagagacttccctggtcagccagatatgtggaaagatcacttcaaaccggatttttcccacataaagctaa +ctttggccccccagggcgggtttgataagaatggcaacaccccacatggtaaaggcaccatgcgttctctga +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgagttccagctgcaaggag +ataacctacagacatacaactttgacaccaatagggtctctgcgttcaggaaactagccgcagataacaagt +atggaatcatggagacaatgagagtgggtgcagcactcaagaatgtcaagaccttggaagacctcagagttg +ctttgagagatgtaaaattcaatgaatgtgagatcatctacaagaacaccaagtaccgggtctcatctgatg +gtaaaggcacagtctctgttgacaaagtcgaggacctcgcttcccaaaccgcaagcgaggtgagctcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgtttccaggaccttgtctacactcttatac +aggttgctggggcttcatttgtcgtca---------------acagaa------tctccaagaggttctgct +gggaaagatgggttaaaccggccgatac-------------ccaggagacgagtgagcccga-----gaagg +aagctgcccagagtg---gatgggagattgaacccaaggacacagaaccagagggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagcaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaataccttcaagaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggatttctgtgaagaggaggaagccaagataaggcaaa +gaattttccgcccaacaaggaagcaaagaaaagaggaaaggggtgtgctcggcctggtcactggcacagata +tcaggaagagaagaccggatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggact +acaacgagagacttgatttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaatctcctaatcacaacaacacatgttctgcccaagggtattaaggaacttttt +ggcgttgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtgttggaagagggtgcgccagagggcactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacacatgcatctatgaaaatccagggcagg +actgttggtggacaaatgggcatgctccttactggggcaaacgcaaagaacatggaccttggaaccggccca +ggggattgcggttgcccttatatttacaagagaggcaatgacatagtcgtggcaggtgtccataccgcggcg +gcccgaggaggcaacacagtcatctgtgccactcaggggcaggacggggaagcagttctcgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcaaggcgcccaagctcagtacgaagaccaag +ttttggcgctcatcgcctgatgccctgccacccggcacatatgaacctgcctacctaggaggcaaagacccc +agagtggagaagggtccttccctgcagcaagtcatgagggatcaattaaaacctttcacagaacccagaggt +aaaccaccaagaccctcagtcctggaagaagctaagaagacagtaatgaacgtcctggaacagaccattgac +cctgctaaaccatggacttactcacaagcatgtgcttccctggataagaccacttccagtggcagcccccac +cacatcagaaagaacgaccattggaatggagagtcttttacaggccctctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcctgtgtacacagctgcactcaaggatgagctcgttaga +actgacaaaatttataagaagataaagaagaggctcctgtgggggtcggaccttggcacgatggtcaggtgc +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgtagagtgggaatg +aacatgaatgaggatggacccatcatttttgacaagcactccaaatatagataccattatgatgctgactac +t-ctaggtgggactcaacccaacaaaggaacatcttgtccgccgccatggaagtgatgg-tgcggttctccg +cggagccagaatt-ggcacaagtagtcgcagaggacctcttggcacctagccagctggacgttggcgacttt +gtcatctcagttcaggaaggcctgccatcaggagtcccatgcacgtcacaatggaattcaatagcccactgg +atcttgaccttgagtgcgatggcagaggtgtcaggcctttcaccagatgttgtgcaggcccattcctgtttc +tctttctatggtgatgatgagattgtgagcactgacatcaaccttgacccctcaaaactgacacagaaactc +agggagtacggtctggtccccacacgacctgacaaaactgaaggccccctggttataactgaggacctcacc +ggcctaacattcctgcgcaggtcgatcgcgcgggatcccgctgggtggtttgggaagctggaccaagactca +atcctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagtatggtcccccattcc +cagcgggccacacaactcatggcccttcttggagaagcctcactacacggaccccaattctacaagaaggtc +agtaagatggtcataagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacagaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacttgagtcatttgtcccgcatgtacaa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaatattagtgcagctcaaattacaatgtgcccccatgt +gattgttgatgtgagacagcttgaacctgtgcttttgcccctccctgacataaggaacagattctttcatta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacacctcttagagc---aaactc +tggtgaggacgtgttcactgtgtcttgcagagtcttgacccgcccagcccctgattttgagttcacattctt +agtgccaccaaccgtggaatcaaagactaagccttttacactccctattttaaccctaggggaactatccaa +ttccaga---ttccctgctccaatagacatgctgtacacagatcctaatgagacaattgtggtacaaccaca +aaatggtagatgcaccctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttgatcagccaa--------- +----------acgtcgaggtca------gc----------------------------agattcaacag--- +--actcagctcca--------cgggtgagga----------------accacccc----------------- +----------cttcacgttcagctgaagaacctcgacgggacaccatatgacccaacagatgaggtgccggc +agttctgggtgccatagactttaaaggaactgtgtttggagtcgctagccaga---ggaacactacagggag +-----ct---ctgtaggg---------gcgact--------cgt-----------gcccatgaggtgcacat +agacaccacaaaccctagatacaccccaaaacttggttctgtgttgat---gc---------attctgagtc +tagtgattt---tgatgatggacaaccaaccc---------------------------gcttcacaccca- +--------ttggcatgggagcag---------------------atgattggcaccaatgggaattgcccga +atattcaggtcac-cttact------ctcaacatgaacctagcccctgcagttgctcctgctttccccggtg +agcgcatcctcttctttaggtcagtggttccat------ctgctggtggcta------cggat--------- +--caggccaaatagactgcctcatcccacaggagtgggttcagcacttctatcaggaggccgccccttcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacacag +agaagggttcattactgtggcaaattctggaaacaaccccatagttgtgcccccgaatggctattttaggtt +tgaggcctgggtcaatcaattctacacactcacccccatgggaactggacaggggcgcagg---------ag +agtcc---------aataatggcaggagctttctttgcaggacttgcaggtgacgccataacgaatggtgtc +gggtccctgatcaacgctgg---ggccaatgcaatcaaccagaaggtggagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcttttaagcatgacaaggagatgctgcaa +tcacaagttctagccaccaaacaactccagcaggaaatgatgaacataaggcaaggggtcttgaccgctggc +ggcttttcccctactgatgccgcgaggggcgctgtaaacgcgccaatgacaaagatcctggattggaatggt +acaagatattttgccccaaatagcatgaaaacaaccagttattcagg-tcagttttccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtc---ctgattc---------------------------c +caaa-------------------aagtcaaaattaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtatatatagttctatgtctactgctccttcac----------------- +---------------------aatcaaccca---ttcaatgattctgactt-------cagg--------gt +ctggatc----g---tccag-------------------gacaacctcctctc---------ccacagtgac +ttccac-------------------cct--------------atctaggaccagtgactgggtgagggggca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacaacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcgaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------tcaatacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagattg-------- +-------atc-aggt--------------------tttcttc------tt-ccttcttt---c---tccttt +t------------cttt-----ctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC013592.1/1-7556 |Norovirus Hu/GII.4/HS191/2004/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagcgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagccaacacggccttcagtgtccccccactcaaccagagggaaaatagagatgctaaggagccatt +gactggaacaattctggaaatgtgggatggggagatctaccattacggcctatatgtggagcgaggtcttat +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctgacaccactctccttgttttg +gagacctgtgtatactcccc---agtatctcatttctccagacactctcaagaaattacacggagaatcgtt +tccctacacagcctttgacaacaattgttatgccttctgttgctgggtcttggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaaccggtttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctatcttcactattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatccttaacatcttagcctcatgtgattg +gactttcgcaggcatggtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttacaaggacccgaggaccttgcagtgga +actcgttcctgtagtgatggggggaattggtctggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaaaagcttgtaaagatcttggtgcatacgggctggaaatcctaaagttagt +catgaagtggttcttcccaaagaaagatgaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgaggacccttgaccttgaggaggagaaagccagaaagctctcaaccaagtccgcatcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccgagacctgttgtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaggtggccaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcatacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgtcataattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgcgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cactggctccacagggtggcttcgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagatctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcagaaccatgccagatcttaaacaag +cactcaaagatatctcaatcaagaagtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaacgagctggccggcgccc +tacaccatctaaggtgcgccagaatcaggtactacgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagggga--------ggctaccaacaaggacgggtgcctaaaacctaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgatatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcgagcaaaggtctcagtgatgaggagtacgacgagtaca +agagaattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgcgaagaggaggaggccaagattcggcaaa +ggattttcaggccaacaaggaaacaacgcaaggaggaaagggcctctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagatgatttcaagcccaaggggaaactgtgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtctctc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggcgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +agacctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggaaaatgactatgtggttattggggtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaagaccaaa +ttctggagatcgtccactacaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagttatgagggatcagttgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaagctgccaagaaaaccgtcatcaatgtccttgaacaaacaatcgac +ccacccgagaaatggtcattcacgcaagcttgcgcgtcccttgataagactacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggattccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcttaatggatgaactcaaagcgcactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagagacattccaggtacaaatatcactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaattgttagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagatttaaat +ggtctgaccttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcagacaaatgtactggactaggggtcccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccatcattctacagcaaaatt +agcaagttggttattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccggg +tgagatactatggagcgcgcccttgggccctgatttgaacccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taaccaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ctcaaga---ttccccattcctttggaaaagttgtacacgggtcccagcagtgcttttgttgtccaaccaca +aaatggcaggtgcacgactgacggcgtgctcttaggcactacccagctgtctgctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcatg----------------------------------actataca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagagaggatggctcgacc--------cgc-----------gcccacaaagccacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaatacacca---------ctgacacaaa +caatgattt---tcaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggcgtcatccaggacggtaataa---ccatcaaaatgaaccccaacaatgggtacttccaaa +ttactcaggtaga-actggt------cataatgtgcacctagctcctgccgttgcccccactttcccgggtg +agcaacttctcttctttaggtccactatgcccg------ggtgtagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggaatgggtgcagcacttctaccaagaagcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacactggcccacatgatttggttatcccccccaatggttactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgcaga---------cg +tgtat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttctttccaatttagtagcaatctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggccactaagaaattgcaacagggcatgatgaaggttaaacaggcgatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggctcctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggga----------------gaaataaccttagggccac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +cacacttt-----------ctagc------------attcccactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggcaccagtgtctcgagtcttccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaaaaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>KC175323.1/1-7559 |Norovirus Hu/GII.4/Hong Kong/CUHK3630/2012/CHN, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgccaaggagccact +aactggaacaatcattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccattagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---attatctcatctctccagacactcttaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggcttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaagaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtggcacctacacacttgaggctgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagtaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaggctgtgggctgatgatgacagaagtgttgact +acaatgagaaacttaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaagtcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagagggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagaccct +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgactgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtaccttgcacctcccagtggaattccatcgcccactgg +ctcctcactctgtgtgcactctctgaagtcacggacctgtcccctgatatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtacccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggtaggtgcacgactgatggcgtgctcctaggcaccacccaactatctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccata----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggagcaattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------ttggtgtcatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cctaatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaggctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +taagtctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t-----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX846924.1/1-7527 |Norovirus Hu/GII.3/HK71/1978/CHN, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------gccagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactaaatagtat +ggctgtcacttttaaacgag----ccctcggggcccggcccaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acccccacgaccgcccactccggagttggtc-------aaaaagatccc +gcc-----------------------------tcccccgcccaacgg------ggaggacgagttagtggtc +tcctatagta----------ttaa---agatggcgtctccggtttgcctgagctctccaccgtcagtcaacc +agacgaggccaacacagcatttagtgtccccccattaaaccaaagggagaacagagatgctaaggaaccact +gcccggcaccatcctggagatgtgggacggagagatctaccattatggcctgtacgtggaacggggtctggt +gcttggggtacacaaaccaccagcggctattagtcttgccaaggttgagttgacaccattgtctctatattg +gagaccagtgtacacccccc---agtaccttatgtccccggacactctcagaaagctacatggagaactatt +cccttatacggcctttgataataactgttatgccttctgttgttgggttttagatctaaacgactcttggct +tag---caggagaatgatacagagaacaactggctttttccggccctaccaggactggaacagaaagcccct +tcccaccatggatgattccaaattgaaaaagatggccaatataatactgtgtgctttgtcatcgctgtttac +caggcccattaaggacataattggaaagttgagacccctaaacatcctcaatatattggcttcctgcgattg +gacttttgcaggtatagtagaatccctaatcctcttggcagagctcttt---ggagttttctggacgccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgagctacagggacctgaagaccttgctgtgga +gctcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaagaaaagattggaaaaatgct +atcatctgctgcatccactcttagggcttgtaaagaccttggagcatacgggttggaaatcttaaaattggt +catgaagtggttcttcccgaagaaagatgaggcaaacgagctcgcaatggtgagatccatcgaggacgcagt +attggatctcgaagcaattgaaaacaaccacatgacctctttgctcaaagacaaggacagtttggcaaccta +catgagaactctagatcttgaagaggagaaggctagaagactctccaccaagtctgcctctcctgacatcgt +gggcacaatcaatgccctattggcgcggatcgcagccgcccgctccctggtgcatcgggcaaaagaagagct +ctctagcaggccaaggcccgttgttgtgatgatatcaggcaaaccaggaataggaaagactcacctcgctag +agagttagcaaagaaaattgcagccaccctcacaggagatcagagggtgggccttgtcccacggaacggtgt +tgaccactgggacgcatacaaaggtgagagagtcgtcctttgggatgactatgggatgagcaaccccattca +cgacgccctcagactgcaagaacttgctgacacgtgccccctaacactaaattgtgataggattgagaacaa +gggaaaagtctttgacagtgacgctataatcattacaactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcaaggcgcattgacttcctcgtgtatgctgacgcccctgatgttgaaaaggcga +agcgcgactttccaggacaacctgatatgtggaaggacgctttcaaacccgacttctcacacataaaactaa +tgctggcccctcaaggtgggtttgataagaacggcaacaccccacacggaaagggcgtcatgaaaaccctca +catctggttctctcattgcacgtgcatcagggctcctccatgaaagattggacgaatacgagttgcaaggcc +caacgcccacaaccttcaatttcgaccagaacaaggtctttgctttcaggcaactcgctgctgaaaacaaat +acgggttgatggacactatgagagtgggaagccagctcaagggagtcaaaactgtgtcagagcttaagcagg +cgctcaagaacatcgcaattaaaaggtgccagatagtctacagtggttccacatactcacttgaatctgatg +gcaaaggtaatgtgaaagttgagaaggtacagagtacaactgtgcaaacaaacaatgagctatctggtgcgc +tacaccacctcagatgcgccaggatcagatattatgttaagtgtgtccaggaggccctttattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaaacgcatga------acatacaaaatctctggt +ctaagccacaggtggaggatgcagaaga--------aaccatcaataaagatgggtgcccaaagccaaaa-- +-gat----gatgagg---aatttgtcatctcgtctgaagacatcaaagtcgagggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcaagcaagggtctcagtgatgaggagtacgatgaataca +aaagaattagagaagaaagaaatggtaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaagaggtggccatagccagggctactgaagaggacttctgtgaggaagaggaagccaaaatccgacaga +ggattttcagaccaacgaggaaacaacgtaaagaggagagggcttctcttggcctggtcacaggctcagaaa +tcaggaagaggaacccagacgacttcaaacccaagggaaagttgtgggctgatgacgacaggagtgtcgatt +acaatgagaaactcagctttgaagctcccccaagcatctggtcaagaatagtcaactttggttcaggttggg +gtttctgggtttcac-caagtttgtttataacatccacccatgttatacctcagggatcacaggagttcttc +ggggtttccattaaacagatccaaatccacaaatcgggtgagttctgccgactaagatttccaaaaccaatc +agaactgatgtgacaggcatgatcctggaggaaggggcccctgaaggaacagtggccacactactcataaag +agaccaactggggagctcatgccactggcagctaggatgggcacccacgcaactatgaagatccagggtcgc +actgttgggggccaaatgggaatgctcttgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtgggtgcccatatatctacaaaagaggaaatgactacgtggtcattggagtccacactgccgcc +gctcgcggggggaacaccgtcatctgtgcaacccagggaagcgagggtgaggccatgcttgaaggtggtgac +aacaaaggcacctattgcggtgccccaatcctaggtccaggaaatgcccccaagctcagtactaagaccaaa +ttttggaggtcctcaacagctccactcccacctggcacatacgaaccagcctacctcggaggtaaggacccc +aggatcaaaggtggcccctcattacaacaagtcatgagagatcaattaaagccattcacggaacccaggggc +aaaccaccaaacccaagtgtgctagaagctgccaaaaagaccatcattaatgttcttgaacaaacaatagac +ccaccacaaaaatggtcatttgcacaagcatgcgcatcgcttgacaaaaccacctccagtggccacccgcac +cacatgcggaagaatgaatgttggaatggagagtccttcacaggaaaattggcagaccaagcttcaaaagct +aacctaatgtatgaggaaggtaaaaacatgaccccggtctacacaggtgccctcaaggatgagctagtcaaa +actgacaaaatatatggcaagattaagaagaggctcctctgggggtcagacctggcaaccatgatccggtgc +gctcgagcattcggagggctaatggatgaactcaaggcccactgcgtcacactccctattagggttgggatg +aacatgaatgaggatggccccatcatctttgagaagcactccaggtacaactaccattatgatgcagattac +t-ctcggtgggattcaacacaacagagggctgtgttagctgcagctctagaaatcatgg-taaaattttccc +cagaaccacacct-agcccagatagtcgcagaagaccttttgtcccccagtgtgatggacgtgggcgatttc +aaaatatcaatcactgaagggctcccctctggggtgccttgcacctcacaatggaactccatcgcccattgg +ctcctcacactctgtgcactctctgaggtaacaaatttgtcccctgacaccatccaagcaaattctcttttc +tctttctatggtgatgatgaaattgtgagcacagatattaaattggatccagaaaagctgacagctaaattg +aaagagtatgggctaaaaccaactcgccctgacaagactgaaggacctctggtcatctctgaggacttgaat +ggtctgaccttcctgcggagaactgtaacccgcgacccagctggttggtttggaaaattggaacagagttca +atacttagacaaatgtattggaccaggggccccaatcatgaggacccctccgaaacaatgataccacattcc +caaagacccatacagctaatgtccctactaggtgaagctgcactgcatggcccatcattctacagcaagatc +agtaagctagttattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagaaccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgctgctccatctaa---cgatggtgccgccggcctcgtcccagagatcaacaatga +ggcaatggcgctagagccagtggcgggtgcagcgatagcagcacccctcactggccagcaaaacataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtgtcacctaggaattcccctgg +tgaagtgcttcttaatttagaattaggtccagaaataaacccctatttggctcaccttgctaggatgtacaa +tggttatgcaggtgggtttgaagtgcaggtagtcctggctggaaacgcgtttacagc---aggaaaggtgat +ctttgcagctataccccccaattttccaattgataatctgagcgcagcacaaattacaatgtgcccgcatgt +gattgtggatgtcaggcagctggaaccaattaatcttccgatgcctgatgtccgcaacaatttctttcatta +taatcaagggtctgat---tcgaggttacgcttaattgcaatgctgtatacacctcttagggcaaacaattc +cggagatgatgtttttactgtgtcctgtagagtattaactaggcctagccctgatttctcattcaattttct +tgtcccacccactgtggaatcaaagacaaaacccttcaccctccccattctgactatctctgaaatgtctaa +ttccagg---tttccagtgccaattgactctctacacaccagcccgactgagaacattgttgtccagtgcca +aaatgggcgcgtcactcttgacggtgagttaatgggtaccacccaactcttgccgagtcagatatgtgcttt +caggg-----------------------------------------gcacgctcaccagat----------- +-----------caacaagcagg------gccagtgatcaagccgacacagcaacccctaggttattca---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggacaatctaaatggaaccccctacgaccctgcagaggacataccagc +ccctctgggaacaccagacttccggggcaaggtctttggcgtagccagccaga---gaaa------------ +-----cc------------ctgacagcacaaca--------aga-----------gcacatgaagcaaaagt +ggacacaacatctggtcgcttcaccccgaaattgggttccctagaaatatcc------------actgaatc +cgatgactt---tgacccaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacaa------------tgaggcagattttcagcaatggtccttacctga +ctattccggtcag-ttcact------cacaacatgaacttagccccagctgtcgcccccaatttccctggtg +agcagcttcttttcttccgctcacagttgccat------cttctggtgggcgg-----tcta---------- +--acgggattctagactgcctggtcccccaggaatgggttcaacacttctaccaggaatcagcccctgccca +aacacaggtggccctggttaggtatgtcaaccctgacactggtagagtgctatttgaggccaagctacataa +attaggtttcatgactatagctaagaatggtgactctccaataaccgtccctccaaatgggtactttaggtt +tgaatcttgggtgaaccccttttatacacttgcccccatgggaactggaaatgggcgcaga---------ag +gattc---------aataatggctggagcctttatagcaggattggctggtgacatgctcacaagtactgtg +ggatctttagttaatgcagg---ggctagtgctatcaatcaaaaagttgattttgaaaataataaatat--- +------------------------------ttacaaaatgcatcttttaatcatgataaggagatgttaaat +gcacaaattgaggcaacaaagaggctacaggctgacatgattgctatcaaacaaggggtcttgaccgctggc +ggcttttcccccactgatgcagcccgtggggcaattaatgcccccataacaagagttttggactggagtgga +acgaggtactgggcaccaaacgccacctccacaacctcaatgtcaggtggcttcaca-agcca--------- +aa-------------ctgtacacagaaccacaccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaagtccacacccagcagtgggtcttcagtgagatca +aactcaacccaactcac--tagcttgagctcacactcatccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cggttgttagctcattgc-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ttccaa---------------------------------------caggactagggattgggtcaatcaaca +gaatttcaatttggaaccacacatgc---ctggatctctcaggacagcttttgtcactccaccatctagtac +agcctct---aatt------------------------------cagaca---cggtctcaaccgtgcccaa +aagtgttttgga-ctcctggacatctgcgt------------ttaatacgcgcagacagccgctattcgcac +accttcgcagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------tct-taa--------------------attt-a--------gt-tt------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX846925.1/1-7492 |Norovirus Hu/GII.2/KL109/1978/MYS, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgta------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----cccttggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cccccaaggccacccactccagaactggtg-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------ggaagatgaaccggtcgtt +cattatagtg----------ccaa---agatggcataactgggctgcccgaacttacaacagtgaggcagcc +agaagaggttgctacagcattcagcgtcccacccctcgaccagagagagaatagggacgctaaggagccatt +gaccggcaccatcttggagatgtgggatggcgagatctaccattatggcctatatgtggagcgagggctggt +gcttggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gagaccagtgtacacccccc---agtatctcatcgctcctgacaccctcaggaaactgcacggggagttatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttggaattaaatgattcttggtt +gag---cagaaggatgatacagagaacaactggctttttcaggccttaccaagattggaataggaagcccct +ccccaccatggatgactccaagttgaagaaggtggccaacatacttttgtgtgccttgtcatcactattcac +tagacccatcaaggacataattgggaaactcaggcctctcaacatccttaacatcctggcttcttgtgattg +gtctttcgcaagtatagtggaatctctaattctcctggctgaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacctgaagatcttgctgtgga +acttgtaccggtagtaatgggggggataggattggtgttggggttcaccaaggaaaagattgggaagatgct +atcatctgccgcctccaccctgagggcctgcaaagaccttggcgcctatgggctggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaggaggcaaacgagcttgcgatggtgagggctattgaggacgcagt +cctagatctcgaggctattgagaacaaccatatgacagctctactcaaagataaagatagcctcgcgacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccactaagtccgcttcacctgatatagt +gggcacgatcaacgccctactggctagaattgccgctgctcgttcccttgtacacagggccaaggaagaact +gtccagcagactaaggccagttgtcgtgatgatatctggcaaacctggcatcgggaagacccatctggctag +agaattggcaaagaagattgctacaaccctctcaggagaccagagggtaggcctcatcccccgcaacggagt +cgaccactgggatgcttacaagggtgagagagtcgttctctgggacgactatggaatgagtaaccctgtcca +cgatgccctaagactccaagaacttgctgacacctgccccctgaccctaaactgtgacagaattgagaacaa +gggcaaggtttttgacagtgatgccataatcatcacaaccaacctggctaacccagctccacttgattatgt +caactttgaagcttg-ctccaggcgcattgacttcctcgtgtatgccgatgcacctgacgttgagaaggcga +agcgcgacttcccgggacaacctgacatgtggaagagcgcttacagtcccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacgggaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaaagactggatgaattcgaactacaaggac +ccaacctcacaactttcaactttgaccgtaataaaatacaggcttttaggcagcttgctgccgaaaacaaat +atggcctggtagacacaatgagagtgggtggacaactcaagagtgtcagaactataccagaactcaagcagg +ccctcaagaacatattaatcaaaaggtgccagatagtgtacggtggcagcacctacacacttgaatctgatg +gcaaagggagtgtgaaagtggaaaaagtgcaaaataccaacatccaaatcaacaatgagctagctggtgctc +tacaccacctccgatgcgccaggatcaggtattatgttaaatgtgttcaggaggctctttactccattatcc +aaattgctggggccgcgtttgtaaccacgcgcattgtgaagcgcatga------acatacagaacttgtggt +caaggcctccagtaggagatgcggagga--------ggtcactagccaggatggttgcccaaagcccaaa-- +-gat----gatgatg---agttcgtcatctcgtctagtgacatcacgcctgaaggcaagaaaggaaagaaca +agactggccgcggtaagaaacacacagccttctcgagcaagggtctcagtgatgaggagtacgatgagtaca +aaagaattagggaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaagtggccatagccagggcaactgaggaagacttctgtgaggaagaagaagccaagatccgacaga +ggatatttaggccaacgaggaagcaacgcaaggaggagagggcttcccttggccttgtcaccggctcagaga +tcagaaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgatgaaagggttgttgact +ataatgagaaactcagtttcgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttttgggtgtccc-ctagcctgttcattacatcaacccatgttataccccaaggcactcaggaattcttt +ggtgtacccatcaagcagattcaaattcacaaatcaggggagttctgccgcctgagattccctaaatcaatc +agaactgatgtaacaggcatgatcctagaagagggagccccagaaggaaccgtggtctcactactcatcaag +agaccaaccggtgagctcatgcccctggcagccagaatgggcacccatgcgactatgaagatccaaggtcgc +acggttgggggtcagatgggcatgttgctaacagggtccaatgctaaaagcatggatttgggcacgacgcct +ggtgactgtggctgcccctacatttataagagaggcaatgactacgtggtcatcggcgtgcacacagccgcg +gctcgcggaggtaacactgtcatctgtgcaacccagggtagtgaaggtgaggccacgctcgaaggcggtgat +aacaaaggtacctactgtggagctccaatactaggtcctggtaacgcacccaaactcagtaccaagactaag +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcctacttaggtggcaaggatccc +agggtgaagggtggaccttcactacaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagccgccaagaagaccattatcaatgtgttggagcaaacaatagat +ccccccaaaaaatggtcattttcacaagcatgtgcgtcgcttgataaaaccacctccagcggccacccccac +cacatacggaagaacgattgctggaatggagagtcttttacaggaaaattggcagatcaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtctatacaggggccctcaaggatgagctggtcaag +actgataagatttatgggcagatcaagaaaaggcttctttggggctcggacttggcaacaatgatccgttgt +gcgcgggcgtttggagggttgatggatgagcttaaggcccattgtgtaacacttcctgtcagggttggaatg +aacatgaatgaggatggacccataatctttgaaaagcactccaggttctcataccactatgatgcagactac +t-cacgatgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-taaaattctcac +cagaaccacattt-ggcccaaactgttgcagaggatctcctagcccccagtgtgatggatgtaggtgatttc +aaaataacaattaacgagggtctgccctcgggagtaccctgcacatcacagtggaattccatcgcccactgg +ctcctcacactctgtgcactatctgaagtcacaaacctggctcctgacatcatacaagctaactccttgttc +tctttctatggtgatgatgaaattgtgagcactgatataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaagccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggtttgacctttctgcggcggaccgtgacccgtgatccagctgggtggtttggcaagttggaccagagttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +caaaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccaacgttttacaccaaaatc +agtaaattggtcatcacagagctgaaggaaggtggcatggatttttacgtgcccagacaggaacccatgttc +aggtggatgaggttctcggatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggcgcagccggcctcgtgccagaaagtaatagtga +ggtcatggctcttgagcctgtggctggtgctgccttggcagccccggttaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaattcacagtttctccccgcaatgcccctgg +tgaagtgctattgaatctagaattgggtccagaattaaatccttatctggcacatttggcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgctagctgggaacgcgttcacagc---tggcaaattggt +cttcgctgctgtaccacctcattttccggttgaaaaccttagcccacagcaaattaccatgttcccccatgt +gattatagatgttaggactttggaacctgttttgttgccactccccgatgttagaaataatttctttcatta +taatcaaaaagatgat---cctaagatgagaattgtggctatgctttatactcccctcaggtccaatggttc +tggtgatgatgtgtttacagtctcttgtagggtgttgactagaccctcccctgattttgattttacatacct +ggtgccaccaacagtggaatccaaaacaaaaccatttactcttccaatccttacacttggggagctttccaa +ctctaga---tttccagtgtccatagatcagatgtacactagccccaatgaagtcatatctgtgcagtgcca +gaatggaaggtgcacactggatggggagctccaaggaacaacacagctccaagttagtggcatttgtgcatt +caaag-----------------------------------------gagaagtgaccgcccac--------- +-----------ttgcagga--------------------------------------------caatg---- +-------atcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctctgaggacatccccgc +ccccctgggtgtgcccgactttcagggaagggtctttggtgtcatcactcaaa---gagacaa--------- +-----ac-----agaatgccgctggacaaagcc--------agccggcaaacaggggacacgatgctgtagt +tcccacttacacagcccagtacaccccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---taaagtcaaccaaccagtaa---------------------------aattcaccccag- +--------tcggtctca---------atgatac---------agaacatttcaatcagtgggtggttcctag +gtacgctggtgct-ttaaat------ctaaatacaaatcttgccccctctgttgctccagtgtttccagggg +agcgtttgctcttctttaggtcatacctccccc------ttaagggtggtta------tggaa--------- +--acccagctattgattgcctgctaccacaagagtgggtgcagcatttttatcaggaagcagccccctcaat +gagtgaggtggcccttgtcagatacatcaatccggacactggccgggcgctgtttgaggccaaactccacag +agctggtttcatgacagtctcgagtaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtgaaccaattttattctcttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------agtaatggctggagctttcgtagctggtctcgcgggggatgtgctcagcaatgggctc +agttcactaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaaccagaga--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttttcccctactgatgcagccagaggcgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggactacatcctactctggcaggtt------------------- +-----------------------cacatcgaccgcccc---------------------------------g +gcaaggc----------------aggccgactt--------------------------------------- +------------------------------tcaacacactcaaaatcggccttcg---------------ag +tggctctt-----------ctgtg------------tcctcttataccactcaat----------------- +----------cttcaa-----gaccaactct------aaccacaaccac----------aggg--tcctcac +acggtac--------aacctcatccaattcgacccgtagcacaaacctttcccagtcgacggtctctagggc +tacctc---------------------------------------taggactagtgagtgggttagagatca +aaataggaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccccaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX846927.1/1-7534 |Norovirus Hu/GII.6/CHDC4073/1984/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgctgcctttggcagtcaa---aactctgtcaat +g------ac----agtaccaacaccaccccttctaacaaagaagaggt------tggtgcattatccaacat +caaagttggatttaagaaaa----tgctgggtgccgtacccaagagcacc-------------aaagcaccc +agcagtga----------------tcagcatcgccccacagttaagatcgggcctaaaacattagtagtccc +tcc-----------------------------tgagcccccaaatgg------tgaagac------accata +cagtttgatg----------cgaagtcagaaactataagtgggctaccagatttaacaacggt---gcaaaa +tgaacacgagaacaccccttacactgtccctccattgagtgagagggaacacagaccagccactgagccact +tcctggcacaatattggagatgtgggatggtgaattctaccactattccgtgtacgtcagcggcggcaaagc +tctaggggttcacaaacctccagcagctataagcctcgcgacgatagagctcacccccatatctctttactg +gaggcccgtttacaccccca---actacttggtctgcccagacacattgaagggtcttgctggtgaaaagtt +cccctacacggctttcagtaacaactgttataacttctgttgctgggtgcttgagctcaatgacacatggct +tag---cagaagaagcatctccagaactaccggcttcttcaaaccataccagtcttggaacaggaagcctct +tccaaccgttgatgacgggaagatcaaaaaggtggccaacgcaatcctctgtgcactcggctcgctgttttc +aaaaccaatcaaagacctgttaggcaagcttaaaccattgaacctgttacacttgctcgcgtcatgtgattg +gacgtttgcgggtatagtggagacagttatcttaatggcggaacttttc---aatgtcttttggactccgcc +agatgtctctaatttcatagcctccctgataggtgactttgaattgcaagggcctgaggacctggctgtgga +gcttgttcccgtggtcatgggtggtgtaggaatggttctcggcttcaccgctgagaagataggccgcatgct +gtcatccgctgcatcaacactgcgagcatgcaaagacctagggaactatgcccttgacatactcaaattggt +catgaagtggttcttcccaaagaaagaagagaaagccgagatggaaaccttaagggcgattgaggatgccgt +cctagatatggaagccatagggaacaaccatctcacgaccctcctcaaggacaaggacagcctcacggcctt +catgaagactttggacctagaagaggagaaggcaaggaaattgtccactaaatcatcctctccggacatcgt +cggcactatcaatgccatactggcaaggatagctgccgccagatccctcctacacaaggccaaagaagaaat +gttcagtaggatcagaccagtggttgtcatgatatcaggcaggcctggcattggcaaaacccatatggcaag +acacttggctaagagcatcgccaacaccatgagtggcgaccagagggtcgggctcgttccgcgcaacggggt +cgaccactgggacgcctacaggggagagagggtggtcttatgggatgactacggtatggggaaccctgttaa +agatgctttgacactacaagaactggccgacacctgcccagtcactctaaattgtgataggatcgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacgaccaacctagtcaaccctgcgcccctcgattatgt +gaacttcgaggcgtg-ctccaggagagttgacttcttggtctatgcagagtcaccagaagttgaaaaggtta +agagagatttccctggccaacctgacatgtggaaagaccactttaagccagacttttcccacataaagttga +ccctagccccccagggtgggtttgacaagaatggtaacaccccgcatggcaagggcaccatgcgatccctaa +cccagggatccctgactgcgcgagttgcaggccttgttcatgagaggagagatgagttccagctccaaggga +acgacctccaaacgtacaactttgacaccaacagggtctccgcattcaggaagctggctgcagacaacaagt +atggaattatggaaacaatgagagtgggtgcggcactcaaaaatgtcaagactttggaagacctgaaagtcg +ccttgagggatgtaaaattcaatgagtgtgaaataatttacaggaactctaagtatcgagtctcttccaacg +gtaagggctctgtttctgttgataaagttgaggatcatgcatcccagactgaaaatgaggtgagctcagcac +ttctcaggctcagacaagcaagggccagatattatgtcagctgcttccaagacctcgtctacactctcatac +aggttgccggggcatcattcgttgtta---------------acagga------tctccaaaaggttctgct +gggagaggtgggtcaaaccaaccgagac-------------ccaagaagcgaatgaagtcga-----aaagg +aagtagctcaaggta---aatgggagattgaacccaaggacacagaaccagaaggcaagaagggcaagaaca +agaaaggaagaggcaagaaacacacagctttctccagtaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaacggaaaatactccattgaggaatacctgcaagaccgggaccgctac---t +acgaagaagtggcagttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaagataagacaaa +gaatcttccgcccgacaaagaaacagagaaaggaggaaaggggggtgctaggcttggtcaccggctcagaca +tcagaaagaggagaccagacgatttccaaccaaaaggtaaactgtgggcagacgacaccagaagtgtggatt +acaatgagagacttgatttcgaggctcccccaagtgtctggtcgagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaacctcctgatcacaacaacacatgtcttgcctaagggggttaaggaactcttt +ggagttgaaattaaacaaatccaaatccacaaatctggagagttctgcaggtttagatttccaagaccaatc +aggccagacgtcacaggactcgtgttggaggaaggcgctccagaaggcactgtctgttccatactcataaag +agacctacaggtgagatgatccccctggcagtgaggatgggcacgcatgcatccatgaaaatacagggtagg +accgttggtggccagatggggatgcttctcacaggggcaaacgcgaagaacatggatcttggcaccggtcct +ggtgactgcggttgtccttacatctacaagcgcggcaatgacatagttgtcgcgggtgtccacaccgcagca +gcccgggggggcaacactgtcatatgtgccactcaagggcaagatggagaggcagtccttgaggggaatgag +gacctcggcacttactgcggtgctccaatcctgggccctggcaaggcgcctaaactcagcacgaagaccaaa +ttctggcgttcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaggaccct +agagtggagaaaggaccctccctgcagcaagtcatgagagatcagctaaagccctttacagagcccaggggc +aaaccacctagacctgcagtcttagaagaagctaaaaagacagtgatgaatgttctagaacaaaccattgac +cctgctaagccatggacctactcgcaagcatgtgcctcactggacaaaaccacttccagtggtagcccccac +catgtcaagaaaaatgaccattggaatggggagtccttcactggtccccttgcagatcaagcatctaaagcc +aacctcatgtatgaacaggccaaacatatgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatgggggtctgaccttggcacaatgatcaggtgc +gccagggcttttggcggtctcatggacagcatgaaggcaagttgcatagctcttccatgcagagtgggaatg +aacatgaatgaagatggccccatcatatttgacaaacactctaagtacaggtatcactatgatgctgactat +t-ctaggtgggattcaactcagcaaaggagcattctctctgccgctatggaagtgatgg-tgcggttttctg +ctgaaccagaatt-ggcacaagtagttgcagaggaccttttggcacctagccagctagatgttggcgatttt +gtcatctcagtccaggagggtctgccatcaggagtcccatgcacatcacagtggaattcaatagcacactgg +atcctaactttgagtgcaatggcagaagtgtcaggtctctcaccagatgttgtccaagcccactcctgcttt +tcattttatggtgatgatgagatcgttagcactgacatcaaccttgaccccatgaaattgacacagaaactc +agggagtacggtctggttcccacccgacctgataaaactgaaggccccctcgtcataactgaagacctcacc +ggcctgacgttcctacgtaggtcgattgcacgggatccggctgggtggtttggaaaattggaccaggactca +attctcaggcaattatactggacaagggggcccaatcatgagaacccatacgagagcatggtcccccattct +cagcgggccacacagctcatggcccttcttggtgaggcttcactgcatggtccccagttttacaagaaagtt +agcaagatggtcatcaatgagatcaagagtggtggtctggaattttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctgctccatcgaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaatcgcagctcctgttgtcggtcagcaaaatataattga +cccctggattagagaaaattttgtccaagcaccacagggcgagttcactgtttcaccaaggaattcgcctgg +tgagatgctcttaaatcttgagctgggcccagaacttaatccctatttgagtcatttgtcccgcatgtacaa +cggatatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tgggaaaatcat +ctttgccgccgtaccaccacatttccctgtagaaaacatcagtgcagcccagataactatgtgtccccatgt +gattgttgatgtgagacagcttgaaccagtgcttttgcccctccctgatataagaaataggttcttccatta +caaccaggagaacacc---ccccggatgaggctcgtagccatgctctatacacctctaagggc---caattc +tggcgaggatgtgttcactgtgtcctgtagggttctgactcgccccgctccagattttgagttcacattttt +agtgccaccaactgtcgaatcaaaaacaaaaccctttactttacctatcctaacccttggtgagttgtctaa +ctcccgc---tttccggctgctatagatatgctttacactgaccccaatgagtcaatagttgtacagcccca +aaatggtaggtgcactcttgatggcaccttgcaaggcacaacacaattagttcccacacagatttgtgcttt +tagag-----------------------------------------gtaccctgatcagccaa--------- +----------accgcgagagcg------gc----------------------------tgactcaacag--- +--actccccccag--------agagcccgta----------------atcatcca----------------- +----------ttacacgtccaggtcaagaacctagacggcacacagtacgacccaacggatgatatacctgc +agtccttggggctattgacttccaaggcacagtctttggagtggctagtcaga---gggatgtctctggaca +-----ac---aagaacagggccactatgccacc--------aga-----------gcccatgaagcacacat +tgacacaactgacccaaagtatgcacccaaattgggcacaattcttat---ta---------aatctgattc +tgatgattt---taatacaaatcagcccatta---------------------------ggttcactccgg- +--------tgggcatgggtgaca---------------------acaattggagacagtgggaattacccga +ttattctggcaga-ctaacc------ttgaatatgaacctagcccctgccgtttctccatccttccctggtg +aacgaatccttttcttcaggtctatagtaccat------cagccggcggcta------cgggt--------- +--ctggttatatagactgtctcataccccaggaatgggtacaacacttctaccaggaagcagcgccttcaca +atctgccgttgcactggttaggtatgtcaatcccgatactgggcgtaacatctttgaggccaagttacacag +agaaggcttcctcaccgtggccaattctggaaacaacccaattgtggtcccccccaatggttattttaggtt +tgaggcttgggttaatcagttttacacacttgcccccatgggatctggacaggggcgtaga---------ag +ggccc---------agtaatggctggagccttcttcgcagggttagcaggtgatgtcgtgtcgaacggcatc +ggatcccttattaatgcagg---tgccaatgcagttaatcaaaaggttgagtatgattttaataagcaa--- +------------------------------cttcagatggcatcatttaaacatgacaaggagatgctacaa +tcacaggtgctggcaaccaaacaactgcagcaggagatgatgaacataaggcagggggtgttgaccgctggc +ggcttctcccctgcggatgctgctagaggggctgttaatgctccaatgacgaagatactggactggaatggc +acaagatattgggcaccaaacagcatgaaaaccacaagctattcagg-acagttctctagtagccctgtaca +ca-----------gacctcctgctgctccccagcatactgctcc---------------------------a +ccaa-------------------aaagtaagttgcaa----------------------------------- +----------------------------------------------------------------------gg +tgattctg-----------ttagtgtatatagttctccctctactgtttcttcac----------------- +---------------------aatcaaccca---ttcaacagtgctgtctg-------cagg--------aa +ctgggtc----a---tccag-------------------gtccacctccacgt---------ccacagcagc +ctccac-------------------ctt--------------gtctcggaccagtgactgggttaggggtca +gaatgaaaggcttagcccgtttatgg---atggtgccctccaaactacctttgtcacaccaccatcgagcaa +agcttca---tcaa------------------------------atggga---cggtctcaaccgtacccaa +agctgttttgga-ctcctggactcctacgt------------tcaatacgcataggcagcctctcttcgccc +atttgcgtaggcgaggggagtcaca--------aatttag--t-----------gaaaagagtg-------- +-------att-aggt--------------------tttctt------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX846928.1/1-7497 |Norovirus Hu/GII.4/NIHIC9/2011/USA, partial genome +--------------------------------------------cgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccgtcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtaccttatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactggggatgattccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggagaaaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +aggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgctgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggaaagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgagacgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +aacgtgacttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggactgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacaaaatccaaagcgccaccgtgcagatcaacaatgagctggctggtgccc +tacaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaagacacagagga--------gactgtcagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaactgtgggctgacgatgacaggaatgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatt +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcataaaa +aggcccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcgcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacggctgcgctcaaggatgaattagttaaa +actgacaaaatttatagtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctcgaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccagtggaactccatcgcccactgg +cttctcactctctgcgcgctctccgaagtcacaaacctatcccctgataccatacaggccaactctctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaagtggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagaaaaatc +agcaagttggtcattgcagagttaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagctggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataacttctaccatta +caatcaattaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttcttacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgccttcgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +ttacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtaacaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------caaaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaagcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggtcatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaagcttccttccagtttagcagcaatcaacaacaggcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcggcccgtggggcaatcaacgcccccatgacaaaagctctggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccatgagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat--------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX459900.1/1-7558 |Norovirus Hu/GII.4/Randwick/NSW882J/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatacaacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +aactgggacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcaaggttttgt +gctgggcgtgcacaagccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacaccctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccctaccaagattggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +taggcccataaaagacataataggaaagttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagaccttggtgcatatggactagagatcttgaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcaaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggaaagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactacgt +caactttgaggcgtg-ctcgagacgcatcgacttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagttcgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atggattgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaacgtgaaagttgacagagtacagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaagacccaaa-- +-gat----gatgggg---agttcgtcatttcatctgacgacattaaaacagagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgaataca +agagaattagagaggaaagaaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgtaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccggaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataacgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaata +aggaccgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtctcactactcatcaaa +aggtctactggagaactcatgcccctagcggctagaatgggaacccacgcaaccatgaagattcaaggacgc +actgttggaggtcagatgggcatgcttttgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgtggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctaaaaccatttacggagcctaggggt +aagccaccaaagccaagtgtgttagaagctgctaagaaaaccatcatcaatgtccttgagcagacaattgat +ccacctgagaagtggtcgttcgcacaagcttgcgcatcccttgataagaccacttctagcggccatccgcac +cacatgcgaaaaaatgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaagtttatggtaagatcaagaagaggcttctctggggctcggacctggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgagctcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtactggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagtgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaaattgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggccccttgttatttctgaagacttagac +ggtttgacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaatcatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggtgaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---tggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttagaaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtctttacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacctacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggtcacaaagctacagt +gtacactgggagtgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---cgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgttatccaggatggaaatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ctactcaggcaga-aacacc------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggtcctgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtagg---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaggcttccttccaatttagtagcaacttacaacaagcttcctttcaacatgataaagagatgctccaa +tcacaaattgaggccaccaaaaagctgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctccgagacagatgcagctcgtggggcaatcaacgcccccatgacaaaagttttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggtcgcttttccacccct--------- +ca---------------------accctcgggggtacc---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggtccctcc------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcgaatca------gaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +atctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459901.1/1-7559 |Norovirus Hu/GII.4/Caringbah/NSW409G/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgttacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaagaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaatgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaacagagatgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agttccttatctctccagacactctcaagaaactgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggaggatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggacctcgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaaaattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaatcatatgaccatcttgcttaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtacatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +tgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagccctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagcggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggtcgtggtaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttaagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacgcaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatcttagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccttaggccccgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctaccacta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccatccctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatcctacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +atacactgggagcgccgacttttctccaaaactgggtagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctaccatgcccg------ggtgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaagcagccccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagccttctttgctggattggcatctgacgtccttggctctggactt +ggctccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cttgtctt-----------ctaac------------tcttctattgccactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggaaca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ca-----t------ctttc------------tt----t--------tcttt- +-------t-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459902.1/1-7559 |Norovirus Hu/GII.4/Berowra/NSW767L/2012/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtccgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcgcgttctctggtgcatcgagcgaaggaggagct +ttccagcaggccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctatcca +cgatgccctcaggctgcaagaactcgctgacacgtgccccctcactctaaactgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagttgaaaaggcga +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcaattctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacagg +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacaccgaaga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaga +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggcgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgtgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacattgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtaccctgcacctcccagtggaactccatcgcccactgg +ctgctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggggacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattttacagcaaaatc +agcaaattggttattgcagagctaaaagaaggtggcatggatttttacgtgcctagacaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaagcaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaagtttcccaattgaaggtttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagtcctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggagaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------ggaatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaagacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacacc------cataatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttctttagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatctggactgtctgctcccccaggagtgggtgcagtatttctatcaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagatacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggc +gggttctttgagacagatgcagcccgtggggcaattaatgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcgggccgcttttccacccct--------- +ca---------------------accctcgggggcatc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccacccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------gaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +gaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459903.1/1-7559 |Norovirus Hu/GII.4/Jannali/NSW774M/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------gatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggacgacatagtggtt +tcttatagtg----------tcaa---aggtggcgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcttcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctacacagcttttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggccatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcgaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacctaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatttggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgaaagactagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagaactcaagcaag +cactcaagaatatttcaatcaagaagtgccaaatagtgtatagtggtagcacctatacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgcccaaaacccaaa-- +-gaa----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgacgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccaaggagcgaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggaaccgtggttacactactcatcaaa +agatccactggggagctcatgcccctggcagctaggatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagaggggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcttatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctaaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaattaacgagggccttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaagactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgcggagaactgtgacccgcgacccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacattcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctaggaacgctccagg +tgaaatactgtggagcgcgcccctaggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcgacc--------cgt-----------ggacacaaggctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +ccatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatagt------cacaatgtgcacctggcccccactgtagcccccacttttccgggtg +agcaacttctcttctttagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatctggttatcccccccaatggttattttaggtt +tgattcttgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccgggctt +ggttctttgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaattcagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------aa +tacacctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggtcgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459904.1/1-7559 |Norovirus Hu/GII.4/Doonside/NSW536I/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgatg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcagcc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagacgctaaggagccact +cactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccgccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgtccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaaataaagaaggtagctaacatatttctgtgtgctctgtcctcgctattcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacctttgcgggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgctgt +tctggatctcgaggcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagtctggcaaccta +catgagaacacttgaccttgaagaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctgaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcattgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcca +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctacttcatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgaccgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagagctcaaacaag +cactcaagaatgtctcaatcaagaagtgtcaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaagccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagggtctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattccctaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgagggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatacggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtctcctgataccatacaggctaattccctcttc +tctttttatggtgatgacgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccagcaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcctttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaatgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttagaaataatttctaccatta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccaca----------- +-----------tttcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttatgatccaacagaagaaatcccagc +ccccctaggaactccagatttcgtggggaagattcaaggtatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggcagggttcaatttgcca---------ctgacacaga +caatgattt---tgtaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ctactcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggcactgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +aacaggctatgttacagtggctcacactggccaacatgatttagttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcgga +acaaggtactgggctcccgatgctagaactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggccac------------------------------ +------------------------------tgtccccacccggggtccctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggagtttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctctc------------tt----t--------tcttt- +-------t-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459905.1/1-7560 |Norovirus Hu/GII.4/Randwick/NSW938K/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccgcgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaggaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcaaggtcttgt +gttgggtgtgcacaaaccaccagctgccatcagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---aatacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +taggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcttggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgggcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggctttgataagaacgggaataccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggtttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcactttcacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagatttatggt +ccaagccacaaatggaaaacacagagga--------ggccaccaacaaggacgggtgtccaaaacccaaa-- +-gac----attgaag---agttcgtcatttcatctgacgacattaaaactgaaggtaagaaagggaagaaca +aggccggccgtggcaagaagcacacagccttctcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttagaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggacagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgcc +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggacggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaaggaaagaacatggccccagtctacacagctgcacttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagctgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcggaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatttgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcgctccacggcccaacgttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagtgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +agtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctagggactccagacttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaatttagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtagg-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagctccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttagatt +tgactcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +cgcct---------tataatggctggagctttctttgctggattggcgtctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcctccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctttgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggtcttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ctaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacgtatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcataggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459906.1/1-7560 |Norovirus Hu/GII.4/Miranda/NSW850K/2011/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtctccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacacactcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaggttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgcgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcttatgggacgactatggaatgagcaatcccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcacactaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgatagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------gtccaccaacaaggacgggtgcccgaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaagaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +aataagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggttactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcccagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggcagggttctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgttcttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctttgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggcttacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459907.1/1-7560 |Norovirus Hu/GII.4/Woonona/NSW3309/2012/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacaac +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgttttctaacat +ggctgtcacttttaaacggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtc +tcctatagcg----------ccaa---aggtggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggaaagcagggacgccaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactacatggagagtcatt +cccctatactgcatttgacaacaattgctacgccttttgttgttgggtactagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaaaatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaactggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgacattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgttccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctccctcacaggggaccagcgtgtgggtcttatcccgcgcaatggtgt +cgaccactgggacgcatacaagggtgaaagagttgtcctatgggacgattatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgatagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgatttcctcgtgtacgcagaagcccctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagccctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccaccggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagacctcaaacaag +cactcaagaatatcgcgatcaagaagtgccagatagtatacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagcgccactgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgcccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaagccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagacgaaaggaatggtaagtattccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +ggattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagagaaacccagaagatttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttgtaacatcaacccatgtcataccccaaggagcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgagttctgccgattgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcctagaagaaggtgcgcccgaagggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggaggtgat +agtaaagggacatactgtggtgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccaccacaccactcccacctggcacctacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaagccattcacagaacccagaggc +aaaccaccaagaccaaacgtgttggaagccgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcattcgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccacac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaggcctccaaggcc +aacctaatgtttgaagagggaaagaacatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaagatcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacatct-ggcccagatagttgcagaagacctcctttcccctagcgtgatggatgtaggtgacttc +caaatatcaataagtgagggtctcccctctggggtaccttgtacctcccagtggaattccatcgcccactgg +ctcctcaccctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggcttaaaccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattttatagcaaaatt +agcaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +agtagtagatgttagacaactagaacctgtgctgattcccttacccgatgtcaggaataacttctatcatta +caatcaatcaaatgac---tccactattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctctggaaaagttgttcacgggccccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaatatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagacgaaatcccagc +ccctctagggactccagattttgtggggaagattcaaggcatgctcacccaaa------------------- +-----cc-----acaaggacagatggctcgaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccatgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaagatggtagcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaagcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgtag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttcccttatcaatgctgg---ggctgggaccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctttgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccca--------- +ca---------------------accatcgggggtact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggaaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcacctttcatga---agggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-t----tt--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX459908.1/1-7564 |Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctttctaacat +ggctgtcacttttaagcggg----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccgcgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaattagtggtc +tcttacagcg----------ccaa---agatggcgtttccggactgcctgagctcaccactgtcagacaacc +ggaagaaaccaacacggcgttcagtgtccccccactcaaccaaagggagagcagggacgctaaggagccact +aactggaacaattattgaaatgtgggatggagaaatctaccattacggcctgtacgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctagcaccgctctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactctcaggagattacatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttttgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccgtaccaggattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacatccttaacattctggctacatgtgattg +gaccttcgcaggcatagtggaatccttaatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttgctaggtgattatgaactgcaaggacctgaggaccttgcagtgga +actggtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaatcggaaagatgct +atcatccgctgcatccactttaagagcttgtaaagaccttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagacctcgaggcaattgaaaacaaccacatgaccaccctactcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgtcgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcggcctctctcacaggggaccagcgtgtgggtcttatcccacgcaatggtgt +cgaccactgggacgcatacaagggcgaaagagttgtcctatgggacgactatggaatgagcaaccccatcca +tgatgccctcaggttgcaggagcttgctgacacttgccccctcacgctaaattgtgacagaattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgagacgcattgacttcctcgtgtacgcagaagctcctgaggtggagaaggcaa +agcgcgacttcccaggtcaacctgacatgtggaagaacgctttcagtcctgacttctcacacataaaactgt +cattggctccacagggtggttttgacaagaacggcaacaccccgcatggaaaaggggtcatgaagaccctca +ccactggctccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +cagccctcaccactttcaactttgaccgcaacaagatacttgcttttagacagcttgctgctgaaaacaagt +atgggctgatggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgtcagacctcaaacaag +cactcaagaacatcgcgatcaagaagtgccagatagtgtacaatggtagcacctacacacttgaggccgatg +gcaagggtagtgtgaaagttgacaaagtgcaaagtgccattgtgcagaccaacaatgaactagccggtgccc +tacaccacctaaggtgcgctagaatcagatactatgttaagtgcgtccaggaggcactgtattccatcatcc +aaatcgctggggctgcattcgtcaccacgcgcatcgctaagcgcatga------atatacagaatctctggt +ccaaaccacaggtggaagacacagaaga--------gatggccaacaaagatggttgcctaaaacccaaa-- +-gat----gatgaag---agtttgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agtccggccgtggcaagaagcacacagccttttcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagagacaggtac---t +acgaggaggtggccattgccagagcaaccgaagaggacttctgtgaagaagaggaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaagctgtgggctgatgatgacagaagtgttgact +acaacgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggctggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaagtgcaaaagagttcttc +ggagtccctatcaagcaaatccagatacacaaatcaggtgaattctgccggttgagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaggggaccgtggccacactgctcatcaag +agaccaactggagagctcatgcctctggcagccagaatggggacccatgcaaccatgaaaattcaggggcgc +acagttggagggcaaatgggtatgctcctgacaggatccaacgccaagagtatggacctaggcacaacacca +ggcgactgcggctgcccctacatttacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagcgagggagaagccacacttgaaggaggtgac +agtaaagggacatactgtggcgcaccaatcttgggcccagggagcgctccgaagctcagtaccaagactaag +ttttggagatcatccacaacaccactcccacctggcacttacgaaccagcctacctcggtggcaaagacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctgaagccattcacagaacccagaggc +aaaccaccaagaccaaatgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccaccccaaaaatggtcatttgcgcaagcttgcgcatcccttgacaaaaccacctccagcggccacccgcac +cacatgcggaaaaacgattgttggaatggggagtccttcacaggaaaattggctgatcaagcctccaaggcc +aacctaatgtttgaagagggaaagagcatgactccagtctacacaggtgcacttaaagatgagttggtaaag +accgataaagtttatggtaaggtcaagaagaggcttctgtggggttcagatctggcgaccatgatacggtgc +gcccgagcttttggaggcctcatggatgaactcaaggcacactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaagcactccagatatagatatcactatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagcactagaaatcatgg-ttaagttctctc +cagaaccacacct-ggctcagatagttgcagaagacctcctttcccctagcgtaatggatgtaggtgacttt +caaatatcaataagtgagggtctcccctctggggtgccttgtacctcccagtggaattccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaactcccttttc +tccttctatggtgatgatgagattgtaagcacagacataaagttggacccagagaagctgacagcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagacctggat +ggcctgacattcctccggagaactgtgacccgtgatccagctggctggtttggaaaattggaacaaagttca +attctcaggcaaatgtactggaccaggggtcccaaccatgaagatccatttgaaacaatgataccacactcc +caaagacccatacaattgatgtccttgctgggcgaggctgcactccacggcccggcattctatagcaaaatt +agcaaattagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctaaatccctacctatcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactagaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cctaccattaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtttcttgccgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------tcacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacgattatgacccaacagaagaaatcccagc +ccctctaggaactccagattttgtggggaagattcaaggcgttctcacccaaa------------------- +-----cc-----acaaggacagatggctcaaca--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgaaa---------ctgacacaga +ccgtgattt---tgaagctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaagatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ctactcaggcaga-aatact------cataatgtgcatctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaaccagttttacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgcag---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttcccttatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcatccttccaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagctacaacaggaaatgatgaaagttaagcaggcaatgctcctagagggt +gggttctttgagacagatgcagcccgcggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accatcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggatgc------------------------------ +------------------------------tgtccctgctcggggttcctcc------------------ag +caaatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctgtttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aagtaggaatttgtcaccttccatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaggttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccactcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tttt-ct--------ttcttt +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JX445152.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI131/2004/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttctaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggagatgtgggatggggagatctaccattacggcctgtatgtggaccgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctgaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +actcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcttaaagttggt +catgaagtggttcttcccgaagaaagaggaagctaatgaactggctatggtaagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttaggcaacttgctgccgaaaacaaat +atgggttgatggacacaatgagagttgggaggcaactcaaggatgtcagaaccatgccagagctcaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaacgtgaaagttgacagagttcagagcacctccgtgcagaccagcaacgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctgtggt +ccaaaccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaggagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcgggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttc +ggagtccctatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtccacaggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgctaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgct +gctcgcgggggaaatactgtcatatgtgccacccaggggagtgagggggaggccacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacgggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggatctagcgaccatgatccgatgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggacggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatctgtcccctgacatcatacaggctaactccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttgaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaggcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccagtcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggagatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggcagtattcaattcaaca---------ctgatacaaa +caatgattt---tgaagctggccaaaacacga---------------------------aattcaccccag- +--------acggtgttgtccaggatggtaatggtacccaccaaaatgaaccccaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccatagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaagaatgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacgggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaactg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgactaaggctttggactggagcgga +acaaggtactgggctcctgatgctagggttacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggcttctcc------------------aa +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445153.1/1-7485 |Norovirus Hu/GII.4/AlbertaEI142/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +-------------------------------------------------ttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaattaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaggaatctaacacggccttcagtgtccctccactcaatcagagagagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggtctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactgacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctgcaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcatcaaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaaggcctgtagtgttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagagtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcagattgcaagaacttgctgacacttgccccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaatcccctgaggtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaacgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------atatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaagacgggtgtccaaaacccaaa-- +-ggt----gatgagg---agttcgtcatttcatccgacgacatcaaaaccgagggtaagaaaggaaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaagaggaggaggccaagatccggcaga +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatgggaacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctatacagctgcgcttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcttgactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agtaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccactcaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------actacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggagccccagattttgtaggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggggggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccactttaccccaaagctgggcagtgttcaattctcta---------ctgatacaag +caatgacct---tgaaactggccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaaa +ctattcaggtaga-gatagt------cacaatgtacacttagcccctgccgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctatcaagagtcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgagaccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgcggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccgcccct--------- +ca---------------------accctcgggggcatc---------------------------------g +ccaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacaccct-----------ctaat------------gcttctactgccactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaa---------ttttatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445154.1/1-7495 |Norovirus Hu/GII.4/AlbertaEI190/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +-------------------------------------------------ttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaatatcacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactgacaccactctccttgttctg +gagacctgtgtatactcccc---agtacctcatctctccagacgccctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagccaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtcctcgatactcttggcagaactcttt---ggagttttctggacaccccc +agacgtgtctgcgatgattgcccctttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctgtcaaccta +catgagaaccctcgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaataccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaacatctcaatcaagaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaataagatactacgtcaggtgtgtccaggaggccctgtattccatcattc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccggcaaggacgggcgtccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaggacttctgtgaggaggaggaggccaagatccggcaga +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgattttaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccagggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctatacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaag +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagttatgagggatcagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccattatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgcgcgctctctgaagttacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttaccatctctgaagacttgaat +ggcctgactttcctacggaggactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatttgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaagg---ttccctattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccagaattggaacaattatgacccaacagaagagatcccagc +tcctctgggaaccccagattttgtaggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggacggctcgacc--------cgc-----------ggtcacaaagccacagt +aagcactggaagtgtccacttcaccccaaagctgggcagcgttcaattctcta---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaga +ctattcaggtaga-gatagt------cacaatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaggtagggttttgtttgagtgcaagcttcataa +accaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggttctggactt +ggctctctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagcagtaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatc---------------------------------g +tcaggaa----------------gaactaatcttagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacaccct-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcatcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------agtgtaatgt-----------gaaaagac-ag------- +---a-a-a-t-tgaa-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445155.1/1-7484 |Norovirus Hu/GII.4/AlbertaEI438/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +--------------------------------------------cgctgctgct------------aacagc +a------ac----aacgtcaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaggatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagaccagtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccaccatggatgattccaaattaaagaaagtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagggga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaagctcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggagtacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacggtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acgttcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaa-------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445156.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI498/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgccaggcaacc +ggaagagtctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagccaacatattcctgtgtgctctgtcttcgctatttac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaaatggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcttatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggattagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagctttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcactggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagtatctggtcgaggatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgttcataacatcgacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccctttacccgatgttaggaataatttctatcacta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccactaggggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagaaatcccagc +ccctctggggactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagt------cacaatgtgcacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggtcaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgagaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctcc------------------ag +tatacctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +agctgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445157.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI513/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagagtctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaaatggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcttatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgtcccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcaa +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggattagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgaagagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagtatctggtcgaggatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgttcataacatcgacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccctttacccgatgttaggaataatttctatcacta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagaaatcccagc +ccctctggggactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagt------cacaatgtgcacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgagaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgaaagttagacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctcc------------------ag +tatacctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445158.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI603/2006/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgctaccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccgcctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcatgcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccaccatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcggagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +atcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaagtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaggg--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaaacccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaagctcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctctctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacggtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacctct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445159.1/1-7488 |Norovirus Hu/GII.4/AlbertaEI009/2008/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +--------------------------------------------cgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +ggctggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacttt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaacaggcttcttcagaccataccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagattctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctaaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggctaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggtaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgacaagactacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacgaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatccga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagtgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgggttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtggggaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acagagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccttttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445160.1/1-7500 |Norovirus Hu/GII.4/AlbertaEI102/2008/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aagtgttttctagcat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggacgcagt +actggaccttgaggcgattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgccgctgcacgttccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgcgactttccgggccaacctgacatgtggaaaaacgcttttagttctgacttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcggaccaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggctctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacagcgcaaggaagaaagagcctccctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaaacccaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcaattttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggcctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcatcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcacactgcgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggttgtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagccacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaatcatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactaggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattcct +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaggaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcggata------tccca--------- +--acatggatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ccaat------------gtttccactgctactt-------------------- +----------ctgtat-----attcaaatca------aactggttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445161.1/1-7494 |Norovirus Hu/GII.4/AlbertaEI210/2008/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +-------------------------------------------------ttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaattgatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctttatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgcactcaagaaactacacggagagacgtt +cccctacacagcctttgataacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatggtccagaggacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcctggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaacgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaagaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattattaccaccaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgagaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccggagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgcccaggaggccctgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaagactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttccctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtagact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatgggaacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaatcgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaaaatcaagaagaggctcctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttatctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccacgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgtcaggcaactggaacctgtgttgattcccttacccgatgttaggaataatttctatcacta +caatcaatcaaacgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctctacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +taatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtactcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtacttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactggtctcccgatgctaggactacaacatacaatgcaggccacttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggttcctcc------------------ag +catatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445162.1/1-7500 |Norovirus Hu/GII.4/AlbertaEI425/2008/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +-------------------------------------------ccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacctttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cctccacgaccacctactccagaattggcc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacttt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaaatggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +tgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagagctcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacttggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggttgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgctttcaggcagcttgctgctgaaaacaagt +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaactag +cactcaagaatgtctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaattcagagcacctccattcagaccaataatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaga-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaaaaaca +agaccggccgtggcaagaagcacacagccttctcaagtaaaggtcttagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttccgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcctctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatctaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgctgcaacaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaacttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgtcctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgccgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattattcacgggtcccagcagcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctattgagattcgtaaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttgattatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgctcctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggtagaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctag +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445163.1/1-7490 |Norovirus Hu/GII.4/AlbertaEI109/2009/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +--------------------------------------------cgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagagtagggatgccaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgaacgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtccgcttcacccgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggccttatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacccgacatgtggaaaaacgcttttagctctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatttaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcctttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatctacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtgcacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggcctactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttacagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatctagcaaccatgatccggtgt +gctcgagcattcggaggtctgatggacgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcgtctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagtgtggtggatgtgggcgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaaatcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggggaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtttcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaagccgtttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgctgactttaccccaaagctgggcagtgttcaatttggta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaagaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggatttc------------------------------ +------------------------------tacccccgcacggggctccccc------------------ag +cacatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaagca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aagaca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445164.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI045/2010/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaacaggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcatcatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaagggtgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagtccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcgctctctgaagtcacaaacctatcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agtaaattggtcattgcagagcttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcactccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacaggaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagccaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445165.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI119/2010/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcagacaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccttaccaagactggaataggaaacccct +tcccactatggatgattccaaattaaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaagcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgatacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaattttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataagt +atggattgatggacacaatgagagttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcagtgtgaaagttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaatccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttggaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgactgtggctgcccctatatctataagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacatactgtggagcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagaccatcatcaatgcccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacacgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaaaatcaagaagagacttctctggggctcggacttggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgaaaagcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggctcaggtagtcgcggaagaccttctttctcctagtgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccgtctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattttacagcaagatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataactttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaataat +attttcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccataaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattcct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagctgttcacgggccccagtagtacctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------actataca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagagatcccagc +ccctctagggactccagatttcgtggggaagattcaaggcgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgaattttccccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcagctcctctttttcaggtctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctactcccccaggaatgggtgcagcatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtattgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +tatatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445166.1/1-7504 |Norovirus Hu/GII.4/AlbertaEI204/2010/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------------------gctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgc +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatggtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgcttttagttctgatttctcacatataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaggaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +tcaggaaaagaaacccagatgactttaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgt +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagaggggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaacgactgttggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggcccaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggacttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgccggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgagagttaaacaagcaatgctcctagagggt +ggattttctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggcccccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaattttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445167.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI065/2011/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgc +actaggtgtgcacaaaccaccagccgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatggtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggtgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgcttttagttctgatttctcacatataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccactttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaacaaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaggaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aggctggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +tcaggaaaagaaacccagatgactttaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagttaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggtaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgt +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagaggggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +catatgcggaaaaacgactgttggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggcaagatcaagaaaaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacgtatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggcccaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataagattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggacttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtggcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcaca----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaatagttacgatccaacagaagaagtcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggttcgacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aacact------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcaatatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatccctcccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgccggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaagaaatgatgagagttaaacaagcaatgctcctagagggt +ggattttctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggcccccgatgctaggattacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaattttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445168.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI388/2011/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +tccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttctacaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaattcaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gattaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcgggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgcgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggggtgccccaacacttagcaccaagaccaaa +ttttggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaacaatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttttaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgtccccgcccggggttctttc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX445169.1/1-7515 |Norovirus Hu/GII.4/AlbertaEI003/2012/CA non-structural polyprotein gene, partial cds; and major capsid protein and minor structural protein genes, complete cds +---------------------------ac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------ggaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +tccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +tagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgctctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacctacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgatacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggtcgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaatgagctggctggtgccc +tgcaccatttgaggagcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaatctatggt +ccaagccacaagtggaaaacacagagga--------gattaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgatatcaaaactgagggcaagaaggggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcgggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgccgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgcgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcttaggcccagggggtgccccaacacttagcaccaagaccaaa +ttttggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttaaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaagttagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacgcttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagggccgtgttggcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaagatcttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagtacagacataaaattggacccagagaaattgacagcaaagctc +agagagtatgggttaaaaccaacccgccctgacaaaactgaaggacctcttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaacggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaagaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggccac------------------------------ +------------------------------cgtccccgcccggggttcttcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX289821.1/1-7169 |Norovirus Hu/GII.4/MD120-12/1987/USA, partial genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtt-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctatcattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagccttcgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctatcaagactggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaatttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcatggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccagcctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcagtgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccacactactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgca +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacttgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggcggtttcgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacactggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccc---------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JX126912.1/1-7558 |Norovirus Hu/GII.4/Ohio/7I/2012/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaagctaatacggcctttagtgtccccccgctcaatcagagggagaatagggatgctagggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggaccgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatccgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcagttgagaacaaccatatgaccaccttgctcaaagacaaggatagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcagccaagtctgcttcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatagagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaatgcctttagttctgatttctcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcgaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtactccattatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcatcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +aagctggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgtaaggaggaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgaattcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggatt +acaataagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcctaagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgagggcaccgcggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaatactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggatccc +agggtcaagggtggcccttcattgcagcaagtcatgagggaccagttgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaaaaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccgatgt +gctcgagcgttcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggcctcccctctggggtaccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgcgcgctctctgaaactacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccaggatgtacaa +tagctatgcaggtggctttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacggtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggccctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggcactacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagacttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctccacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggtagtattcaattcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttatccaggatggcaatggtacccaccaaaatgaacctcaacaatgggtgctcccaag +ttactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcagcttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatctggattgcctactcccccaagaatgggtgcagcacttctatcaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagctccataa +atcaggctacgtcacagttgctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgcaga---------cg +tgtat---------tataatggctggagctttcttcgccgggctggcatctgatgttcttggctctggactt +ggttccttaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaactg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgcccggggcttctcc------------------aa +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacagggatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcttctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-tc----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>JX126913.1/1-7559 |Norovirus Hu/GII.4/Ohio/7G/2012/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaagctaatacggcctttagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggaccgaggtcttgt +actaggcgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatccgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggatagtttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatagagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaatgcctttagttctgatttctcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtactccattatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +aagctggtcgcggcgagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgtaaggaggaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgaattcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggatt +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcctaagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagagggaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaatactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggatccc +agggtcaagggtggcccttcattgcagcaagtcatgagggaccagttgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaaaaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccgatgt +gctcgagcgttcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggcctcccctctggggtaccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgcgcgctctctgaaaccacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattagacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccagcctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccgggatgtacaa +tagctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacggtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggccctagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggcactacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcata----------------------------------attacata----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaaaaaatcccagc +ccctctggggaccccagacttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----cc-----acaaggggagatggctccacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggtagtattcaattcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttatccaggatggcaatggtacccaccaaaatgaacctcaacaatgggtgctcccaag +ttactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcagcttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatctggattgcctactcccccaagaatgggtgcagcacttctatcaagaggcagctccagcaca +atctgatgtggytctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagctccataa +atcaggctacgtcacagttgctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgttcttggttctggactt +ggttccttaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaactg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagctaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatacaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgcccggggcttctcc------------------aa +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>JN400599.1/1-7509 |Norovirus Hu/GII-4/CGMH01/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaaccttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------ccccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgatctctccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactaacaccactctccttgttctg +gagacctgtgtatactccac---agtacctcatctcaccggatgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccttaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctttgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatactcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaagatgtt +gtcatctgctgcttccaccttgagagcttgtaaagatcttggtgcatacgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaagtgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaattgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +aacgtgacttcccaggccaacccgacatgtggaagaactccttcagttctgatttctcacacataaaactga +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactagctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgagctgcagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaacaatgccagagcttaaacaag +cactcaagaatatctcaatcaggaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgctagaataagatattatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggagccgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaactaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtagact +ataatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +agaactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaag +agatccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgctccaaaacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccacctgaaaagtggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgagctcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagacctcctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagttacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttgaagccaacccgccctgataaaactgaaggaccccttgtcatctctgaagacttaaat +ggcctgactttcctgcggagaactgttacccgcgacccagctggctggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagatccatctgaaacaatgatcccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccggcattctatagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagcctatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcacccttgggccctgatttgaatccctacctctcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatttttatcatta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgctgtatacaccactcagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccctgattttgatttcatatttct +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctctggaaaagttgttcacgggtcccagcagtgcctttgttgttcagccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaattgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaaccccagattttgtaggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaagtagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagtgtccagttctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaaa +ctattcaggtaga-gatagt------cacaatgtacacctagcccctgccgtggcccccactttcccgggtg +agcaactccttttctttaggtccactatgcccg------ggtgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcaacacttctaccaagagtcagctccagcaca +atctgatgtggcactgttgagatttgtgaatccagacacaggtagggtcttgtttgagtgcaagcttcataa +accaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tgtaatggctggagctttctttgctggattggcatctgatgtccttggttccggactt +ggctccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccagtttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcggcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccaaccct--------- +ca---------------------acccccgggggcagc---------------------------------g +ccagggg----------------gaactaatctcagggctac------------------------------ +------------------------------cgtccccgctcggggctcctcc------------------ag +catacctt-----------ctagt------------gcttctattgctactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctaatag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------tgtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400600.1/1-7509 |Norovirus Hu/GII-4/CGMH02/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaggagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagcctcaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400601.1/1-7509 |Norovirus Hu/GII-4/CGMH03/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaggagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccttaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagcctcaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaatcagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatctatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaggttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccgca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggaaatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatatcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400602.1/1-7509 |Norovirus Hu/GII-4/CGMH04/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcacctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctatcaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatggactagagatcctgaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaagt +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatttcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaaggcttatggt +ccaagccacaagtggaagacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggttattggagtccacacggctgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggggtgagggtgaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccgctcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccgaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccactcagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagttcagtagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaggttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctgggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgcctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatccagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400603.1/1-7509 |Norovirus Hu/GII-4/CGMH05/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacgt +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagccaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagtctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccaggatcaggtactatgtcaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgccctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcacctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacacg----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----tc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattaagatttgtaaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aagaca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400604.1/1-7509 |Norovirus Hu/GII-4/CGMH06/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatggactagagatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgacaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggtcacacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagacctcctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcgctctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccactcagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tatgatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +cttagggttaataatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400605.1/1-7509 |Norovirus Hu/GII-4/CGMH07/2006/TW, complete genome +--------atgaaaat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaggagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcatttccggtttacctgagctttccaccgtcagacagcc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +accggaccttgaggcaattgaaaacaaccatatgactaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtcttcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtactctatcattc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagcctcaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctatcgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagttggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400606.1/1-7509 |Norovirus Hu/GII-4/CGMH08/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgagaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcatcgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaacgtgaaagttgacagagtccagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +tcagaaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtcgccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aaaccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgttggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatctatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcatcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400607.1/1-7509 |Norovirus Hu/GII-4/CGMH09/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacattcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctatcaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatggactagagatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccaccaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggttccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagcttaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggccgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcgccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcgagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccactcagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaggctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccaatgcctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatccagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------tgtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400608.1/1-7509 |Norovirus Hu/GII-4/CGMH10/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaactcttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaaaggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcgccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaaatacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaaggagtgccagattgtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgcccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcagacaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggaccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccttacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccttcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtgga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaacccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +actaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtctcaac----------gag--------ac +ttggttc--------cacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------tgtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400609.1/1-7509 |Norovirus Hu/GII-4/CGMH11/2006/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaagagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcccaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatataaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcacatcca +cgacgccctcaggctgcaaaaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttaccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtacagtggtttcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagaaaacacagagga--------ggctactaacaagaacgggtgcccaaaacccaaa-- +-gat----gatgagg---aattcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccaccctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttaaaaactgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgggccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctcaggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtctcctcc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400610.1/1-7509 |Norovirus Hu/GII-4/CGMH12/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaggagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagtagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacgatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagcctcaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----atttaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400611.1/1-7509 |Norovirus Hu/GII-4/CGMH13/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagagaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctatcaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccctttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatggactagagatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacttcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagctaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccctttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccactcagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatcttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgaccgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctcaggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtctcctcc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400612.1/1-7509 |Norovirus Hu/GII-4/CGMH14/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agg---------------------cccccacgaccatctactccagaactggtc-------aaagagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcccaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggatctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggcttcgataagaacgggaacaccccacacgggaagggcatcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttaccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagagaacacagagga--------ggctactaacaagaacgggtgcccaaaacccaaa-- +-gat----gatgagg---aattcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaagggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaagtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaagccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgcttccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgagtctcctcc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aagcagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400613.1/1-7509 |Norovirus Hu/GII-4/CGMH15/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaatcgaaaataaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaggtgccagattgtgcatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggaagggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatggagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccttcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaaattgttcaggggtcgcagcagtgctcttgttgttcatccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaacgagccccaacaatgggtgctcccaag +ttattcaggtgga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtacaaacttcataa +atcagactatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcatgggttaatcaattctacacacttgccgccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcactgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccaatttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +actaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------cacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctattcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400614.1/1-7509 |Norovirus Hu/GII-4/CGMH16/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgattccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggttgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaggattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcttggcttcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctgacaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaactatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagtcgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttagaaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtcgccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcgaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagtagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcctccttcactccaaagctgggcagtgttcaatttagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggcagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctccggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgttcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactactactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400615.1/1-7509 |Norovirus Hu/GII-4/CGMH17/2007/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaggagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaaccccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctatacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctatcttcgttattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagcctcaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtcgccccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaatactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggtccctcgttgcagcaagtcatgagagaccaactgaaaccatttacagagcccaggggt +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctcttttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggacttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggtcctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------ggtgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccactcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400616.1/1-7509 |Norovirus Hu/GII-4/CGMH18/2008/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataacacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgttaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgataacaattgctatgccttctgttgttgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcgtctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggagagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgctc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaattatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcactctactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaattggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtataggtaccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtactggcagctgctctagagattatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtgcacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +tacatctt-----------ctaac------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga--gggggggctcacaacatatcgtttgtca-ccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctcttttcgctc +acattcgtaggggaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400617.1/1-7509 |Norovirus Hu/GII-4/CGMH19/2009/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +ccctggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacctgtggt +ccaagccacaagtggaagacacagagga--------ggctaccaacaaggacgggtgcctaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggattttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcccgaaggcaccgtggccacactactcatcaaa +aggtccactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggaggtcgtccacagtaccgctcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-tcaaattctcct +cggaaccgcattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccctaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaacgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggctgctctgaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgcttactcaaa------------------- +-----cc-----acaaaggcagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccaccttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagacgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcactccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400618.2/1-7479 |Norovirus Hu/GII-4/CGMH20/2009/TW, complete genome +--------atgaaagt---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatggaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgctatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacggcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagagaaggaggaact +ttccagcagaccaagacctgtggtgttgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgc +gctcgagcattcggaggcctcatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagaacttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatccccccg------------------ +------------atttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacggtccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaaaattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagtgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcagtgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagcggggttgaggatca +aaaaaggaatttgtcccctttcatgg---ggggggctcacaacatttcttttttcccccccctatttagcag +atccttt---agcc------------------------------aaggca---cagtttcaaccgtgcccaa +aaaagttttgga-ctcctggacgggggctt------------tcaacacgggcaggcagcctttttttgctc +acatttgcaagggaggggagtcacg--------ggggtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400619.2/1-7509 |Norovirus Hu/GII-4/CGMH21/2010/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatggaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccactatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgctatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgttaggattcaccaaggagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagaggttcttcccgaagaaggaggaggcaaatgagctggctataatgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacggcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacttcgt +gggaacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgaatcgagagacggaggaact +ttccagcagaccaagacctgtggtgttgatgatatcaggcaagccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctatcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatctgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacactcagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgc +gctcgagcattcggaggcctcatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggagtatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtattggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagaacttaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagccccttgtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaaaattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggcgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aacatt------cacaatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctctttttcagatctactatgcccg------gatgcagtgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcatactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcagtgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcccctttcatga---ggggggctcacaacatctcgtttgtcccccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctcttttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400620.1/1-7509 |Norovirus Hu/GII-4/CGMH22/2010/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaggatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagcagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttggaaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +tcaggaaaaggaacccagacgacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgattgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacaccatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgtcaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctaaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggtttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaacggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggtgctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +cacatctt-----------ttaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttt--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcccctttcatga---gaggggctcacaacatatcgtttgtcacccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctcttttcgctc +acatttgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400621.1/1-7509 |Norovirus Hu/GII-4/CGMH23/2010/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgttgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacaccctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaatatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgaggaaacgaggaact +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggccacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aacatgaatgaggatggtcccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgtacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaacaatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ctcaagg---ttccccattcctttggaaaaattgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttatgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acgaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------actctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atattcgcaagcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400622.1/1-7509 |Norovirus Hu/GII-4/CGMH24/2010/TW, complete genome +--------atgaaggg---tgtgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaagttatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctgaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcatcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctgcaaggacctgaggaccttgcagtgga +actcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgatttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcacaaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggagacagctcaaggatgtcagaactatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaacgagctggctggtgccc +tgcaccatttgaggagcgccaggatcagatactatgtcaagtgtgtccaggaggtcctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcgaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +accgttggaggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagccaagaggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaaactggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgctccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacgcaacagagagccgtgttggcagcagctctcgaaatcatgg-tcaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaaatggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccaccttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacaggaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacaaataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcgct---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400623.1/1-7509 |Norovirus Hu/GII-4/CGMH25/2010/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagagtctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacgattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaagttatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctgaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagccaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcatcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctgcaaggacctgaggaccttgcagtgga +actcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcctaaagttggt +tatgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctagatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgaggatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgatttcccaggccagcctgacatgtggaagaacgctttcagtcctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccgcacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcacaaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagggttgggagacagctcaaggatgtcagaactatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagatcaacaacgagctggctggtgccc +tgcaccatttgaggagcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcgaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcctagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +accgttggaggccagatgggcatgcttctgacaggatccaacgccaagagtatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtctacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaaaccattcacagagccaagaggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggggagtccttcacaggcaaactggcagaccaggcttccaaggcc +aacctgatgtttgaaaaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacgctccccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacgcaacagagagccgtgttggcagcagctctcgaaatcatgg-tcaaattctccc +cagaaccacattt-ggcccaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaaatggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagccttttacagcaaaatc +agcaagttggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacctacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaaccaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagcaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccaccttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgactcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggaacggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcgct---------------------------------a +ccaggaa----------------gagctaattttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +tacgtttt-----------ctaac------------ttttttattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ctggttt--------tacagctggttttggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcacccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccttttttcgctc +acattcgcaagcgaggggagtcacg--------ggggtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400624.1/1-7509 |Norovirus Hu/GII-4/CGMH26/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaacccacacctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagcgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcatatcttggtggcaaagaccct +agggttaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatggccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacgacaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacagtgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaattttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttt--------tacagctgattttggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccctaccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccttttttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400625.1/1-7509 |Norovirus Hu/GII-4/CGMH27/2010/TW, complete genome +--------atgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacaga +c------ac----aacgacaccgcgaaatcttcaagtgacg---------------gagtgctctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------ccccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatttggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagcgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcatatcttggtggcaaagaccct +agggttaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatggccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctatcatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cacaatgtacacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaaggtttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggacaacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaattttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctgattctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcccctttcatga---ggggggcccacaacatctcgtttgtcacccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctcttttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN400626.1/1-7509 |Norovirus Hu/GII-4/CGMH28/2010/TW, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcactctcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataacacaa +gga---------------------cccccacgaccaactactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggacgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgttaggcaacc +ggaagaaaccaatacggctttcagtgtccctcccctcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgataacaattgctatgccttctgttgttgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaagggcctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcgtctgctgcatctaccttaagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggagagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgctc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaagccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaaggaacccagacgacttcaagcctaaggggaaattatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggcgcgcccgaaggcaccgtggtcactctactcatcaaa +aggtctactggagaactcatgcccttagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaattggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgactccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctactctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtataggtaccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtactggcagctgctctagagattatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggacgtgggggacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacggacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggcttgaccttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccctaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccaacattctacaataaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcaatcaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtgcacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcagtgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gagccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +tacatctt-----------ctaac------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcacccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtttcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctcttttcgctc +acatttgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JQ798158.1/1-7558 |Norovirus Hu/GII.4/5M/USA/2004, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctctccaccgttaggcaacc +ggaagaagccaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctttatgtggatcgaggtcttgt +actaggcgtgcacaagccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcacctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaaccggctttttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatagaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccggcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggttcccttattgcccgggcatcagggctactccatgagaagctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcgatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgccggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgataatagaagtgtggact +acaatgagaaactcagctttgaggccccaccaggcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaaatcaggcgaattctgccgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgctaaaagcatggacctaggcaccacacca +ggtgattgcggctgttcctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacgcttgaaggtggtgac +agtaagggaacatactgcggtgcaccaatcttaggtccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggcggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaatcatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccattattaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctcgacaaaaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcggatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctaggaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacggacataaaattggacccagagaagttggcagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactct +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccccgatctgaatccctaccttgctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttgggaacaatttctatcatta +caaccaatcaaatgac---cccaccattaaactgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagtcctcacgaggccatctcccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgcttttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggagatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcaccccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtgcccaccaaaatgaacctcaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacttagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------ggtgcagcgggta------cccta--------- +--acatgaatttggattgtctactcccccaagaatgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccagaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttacaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acgaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggcttctcc------------------aa +tgcaccct-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------gactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-c-tgat-----ta-----t------cttt-----------c-tc----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>JQ622197.1/1-7583 |Norovirus Hu/GII-4/CBNU2/2007/KR, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttggtggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgatattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtacaggtgatcctcgcggggaacgcgtttaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtgga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------ggtgcagcgggta------tccaa--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcataggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaa--------- +------------------------------------------------------------------------ +- +>JX023286.1/1-7549 |Norovirus Hu/GII.4/CHDC5191/1974/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacctttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggagttgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaacgg------ggaggacgaaccagtggtt +tcttacaacg----------ccaa---gaatggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +aactggaacaatcctggagatgtgggatggggagatctaccactatggcttgtatgtggaacgaggcctggt +gcttggcgtgcacaaaccgccagcagctattagcctcgctaaggtcgaacttacaccactctctttgttttg +gagacctgtctacactcccc---agtacctcatctccccagacacccttaggagattgcatggtgaatcgtt +cccttacacagcctttgacaacaactgttatgccttctgttgctgggttttggacctgaacgactcatggct +gag---taggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcccct +tcccaccatggatgattccaaattaaagaaagtggccaacatattcctgtgtgctttatcttcactattcac +tagacctatcaaggacataataggaaagctaaaaccccttaacattctcaatattttagcttcatgtgattg +gacctttgcaggcatagtggaatctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactacgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtagtgatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttaaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaaacaaccatttgaccaccctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgccctcctggcgaggatcgcggctgcccgttccctggtacatcgagcaaaggaagaact +ttccagcaggccgagacccgttgtcgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaagatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggacgcgtacaagggagagagggtcgtcctttgggatgactacggtatgagtaatcccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactaaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtacgccgaagcccctgatgttgagaaggcga +agcgcgacttcccaggccaacctgatatgtggaagaatgccttcagccctgacttctctcacataaagctga +tgctggccccgcagggtggctttgacaagaacggcaataccccacatgggaagggtgtcatgaagaccctca +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcagacagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaggtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtagtgtgagggttgacagggttcagagtgccactgtgcaaaccaacaacgaactagccggcgccc +tgcatcatctcaggtgcgccaggatcaggtactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaagccacaactggaggacacggaaga--------agccactggcaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtctcatccgacgacatcaaggttgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggcaagtattctatagaggagtacctccaagacagagacaagtat---t +atgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaggaagaggccaagatccgacaga +gaatctttagaccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggctctgaga +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaagcaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggaccgatgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacactactcatcaag +agaccaactggtgaactcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgc +actgttggaggccaaatgggtatgctcctgacagggtccaatgccaagagtatggacctgggcaccacacct +ggcgactgtggttgtccctacatttacaagagagggaacgactacgtggtcatcggggttcacacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagtgaaggtgaggccacacttgagggcggtgat +aacaaaggcacctactgtggcgctccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agaatcaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggaaccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccattattaacgtcctcgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgaccccagtttacacaggtgccctcaaggatgagttggtcaaa +actgacaagatatatggcaagattaagaagagactactttggggatcggacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgagctcaaggcccactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcattccaggtatagatatcactatgatgcagactat +t-ctagatgggactcaacgcaacaaagagctatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccacactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggacgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtgccttgcacttcacaatggaattctattgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacatcgttcaggccaattctctcttc +tctttctatggtgatgatgaaattgtgagcacagatataaaattggacccagaaaaactgacggcaaagcta +aaggaatacggactgaagccaacccgccctgacaagactgaaggacctctaatcatttctgaggatctaaat +ggtttgaccttcctgcgaaggactgtaacccgtgatccagctggttggtttggtaaattggaacaaagctca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgctgccattgcagcacctgtggcaggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcagggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggtctaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtattgatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tctactctcaaattgatagcaatgttgtacacaccactcagagctaataatgc +cggggatgatgtctttacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaatatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggat------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgatccaacagaagaaattccagc +tcccctgggaacaccagactttgtaggaaagatccaaggtttgctcacccaaa------------------- +-----cc-----acaagagcggacggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgatacgaa +caatgattt---ccaaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccactttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaagcagccccagcaca +atccgatgtggccctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaactccataa +gtcaggctatatcacagtggctcatactggcccgtatgatttggttatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgctt---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttctggactt +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaataatagaaaattg +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaaggtttgatgaaggttaaacaggcagtgctcctagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccagggccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggggcatt---------------------------------a +cctggaa----------------gaatcaatcctagggttcc------------------------------ +------------------------------tgcacctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attccaatca------aactgtttctac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacagaaatttgtcgcctttcatga---ggggggctctcaacacatcatttgtcacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac---------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-ct-------------tcttt- +-------a-------at---g--------------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613552.2/1-7559 |Norovirus Hu/GII.4/NSW123B/2010/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggaccttaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtctctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggatcttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagctcctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacgtctcaattaagaagtgccaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccacttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgctggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccttctgaaacaatgattccacactcc +cagagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccacta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgtttacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccata----------- +-----------ctccagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----ca-----acaaggacaaatggctcgact--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcta-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaataggaatttgtcacctttcatga---tgggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613568.1/1-7523 |Norovirus Hu/GII.g-GII.12/Wahroonga/NSW004P/2009/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccatcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccacccttagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacggatgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagcttagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggcacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctatcattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctacaccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggtgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagtttta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgtat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------ttattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613569.1/1-7523 |Norovirus Hu/GII.g-GII.12/Gunnedah/NSW895P/2010/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +gggtgagacgaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactaaaaagactacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgactccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactctgc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgcaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaaaactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgatgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgccagagctcaaacagg +cactcaagaacattacaattagaaagtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +agattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgtaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcaac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcgaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccctatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgacttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttaaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgagtgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaagctcccaatggagagtttacagtttcaccccgcaactcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttaggtctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccccatcttgaccatgggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gataaccatg----------------------------------tttggaat----------------- +----------------atgcaagttaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggtaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgacaatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aattcactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtgtt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgrtatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagccaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgccttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ttgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctgg-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgcagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtggcacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agcttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613570.1/1-7559 |Norovirus Hu/GII.4/Rockdale/NSW006D/2009/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtc +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagctaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaattaaagaaggtagctaatatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaggatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgtgttacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccctgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaaggcctgtggtgttgatgatatcaggcagaccagggatagggaagacccacctcgctag +ggaagtggctaagaggatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cacttaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggctgtgtgaaagttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaagtccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggaccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacagggtccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctacatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggaggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagaccatcattaatgcccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaagatgagctagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttggcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgagctcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagagacattccaggtacacatatcactatgatgctgactac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +gcaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcgctctctgaagtcacaaacttgtcccctgacaccatacaggccaactccctcttc +tctttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaagatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctgggttagaaacaactttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatatttct +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattctaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtcctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcata----------------------------------actacaca----------------- +----------------atgaatctggcttcccaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctctacc--------cgc-----------ggccacaaagccacagt +gtacactgggagcaccgaattttccccaaaactgggtagagttcaatttgcca---------ctgacacaaa +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtggtactacccaccgaaatgaaccccaacaatgggtgcttccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagctcccacttttccgggtg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaacccagacacaggtagggttttgtttgagtgtaagcttcataa +atcgggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctytgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttagactggagcggg +acaaggtattgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacatctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613571.1/1-7559 |Norovirus Hu/GII.4/Miranda/NSW817L/2010/AU non-structural polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacccactccagaactggtt-------aaaaacattcc +ccc-----------------------------tcccccacccaacgg------agaggacgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---aatacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgttgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaagcccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaagagaaagccaggaaactctcaaccaagtctgcttcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ctccagcagaccaaggcctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcttacaagggggagagggtcgtcctgtgggacgattacggaatgagcaaccctattca +cgatgctctgaggctacaagaactcgctgacacttgtcccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgacgtcatcattatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtttcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccttgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagtaaggacgggtgcccaagacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagggaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggctattgccagggcaactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgatgatgacaggagtgtggact +ataatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggtgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactgctcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttgggggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggaggaaacactgtcatatgcgctacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccgcccggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcgggggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaagatggccccatcatcttcgagagacattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgaaggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatggtttaaaaccaacccgccctgacaaaactgaagggccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcaaagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatt +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaacaatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcctgtcgggttctcacgagaccatcccccgactttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacaggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------tcccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----ct-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcagg-aacatc------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +aacagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagctccataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtcctcggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaaagtcgaatttgaaaataatagaaaattg +caacaagcttcctttcaatttagtagcaatctacaacaagcttcattccaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctytgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggattggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttaggtctac------------------------------ +------------------------------tgtccccacccggggttcctcc------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagaactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613572.1/1-7560 |Norovirus Hu/GII.4/StVincents/NSW217I/2010/AU non-structural polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacggg----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agg---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgatgtagtggtt +tcttatagtg----------ccaa---agacggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccagtacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagtctcgccaaggtcgaattaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaagttacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgcaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactacggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtacgcagaggcccccgaggtcgaaaaggcga +agcgcgacttcccgggccagcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactagctccacaaggtggctttgataagaatgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgcttcatgagagattggatgagtttgaactacagggcc +cagctctcaccacctttaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacatacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagttggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgacgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaggaaggtgcccccgaaggcaccgtagtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacactccctgtcagagttggtata +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacggcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagtcaatgttc +aggtggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaacattatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaaccaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acacagggagatggctcgacc--------cgg-----------ggccataaagccacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggcgctcccaag +ttattcaggtaga-agtgcc------cataatgtgcacctagcccctgctgtagcccccaattttccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcgca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgctcccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcctcctttcagtttagcagtaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttacaacaagaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctttgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggaaccc------------------------------ +------------------------------tacccccgctaggggctccccc------------------ag +tatatctt-----------ccaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatgtcgtttgtcactccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ613573.1/1-7559 |Norovirus Hu/GII.4/Helensburgh/NSW295E/2010/AU non-structural polyprotein, VP1, and VP2 genes, complete cds +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatgttcc +ccc-----------------------------tcccccacccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagagtagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatctggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggaccttaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggatcttgcggtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgccgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcactatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgggcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcagacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatgcttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaataatgagctggctggtgccc +tacaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtactccatcattc +aaattgccggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggccaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agttagtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaagttgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgagttctgtcgcttgagattcccaaagccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcattaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggccacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggtccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggt +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacgtgcggaaaaacgactgctggaacggagagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcactcaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccagatacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgctggcagcagctttagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggccaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggtccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaatccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaacccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtctgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccacta +taatcaatcaaatgac---cccaccatcaaactgatagcaatgttgtacacaccacttagggctaataatgc +cggggatgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgattttatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgtttacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccaag------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagagatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----ca-----acaaggacagatggctcgact--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agtttaccccag- +--------tcggtgttatccaggatggtagtactacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagcttctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgcctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgacgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtagg---------cg +tgcgt---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaacaacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggctaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------cgttcccgcccggggttcctcc------------------ag +cacgtctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>JQ911595.1/1-7511 |Norovirus Hu/GII/10002/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggattacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggaagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcgccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtatcttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacgctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +accgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccctatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggaacccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaagagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcgattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggttatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcttgggttaaccaattctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tatgatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aaccgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgaa-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcaaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JQ911596.1/1-7511 |Norovirus Hu/GII/10003/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccactatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattgcacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgcctttagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acagtgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaagagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattacagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +tcctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +gtctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatcttcaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaatcgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaagttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacgtctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JQ911597.1/1-7510 |Norovirus Hu/GII/10012/2009/VNM, complete genome +-------aatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacggc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgggggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgccgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgaatctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagaagatttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactacgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaagtttgtctccagatatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctc +aaggaatatgggttgaaaccaacccgccccgacaaaactgaaggacctctcgttatctctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgagatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttttacacacttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcgggccgcttttccacccct--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----tttcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JQ911598.1/1-7511 |Norovirus Hu/GII/10037/2009/VNM, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ttc-----------------------------tcccccgcccaacgg------agaggatgaagcagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgttgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagctaagacctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctgggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggataggaaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcagacagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccagagcacctccgtacagaccaacaatgagctggctggtgccc +tgcatcatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaggtattccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaga +ttaggaaaagaaacccagatgacttcaagcctaagggaaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgtttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +accgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccatacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcataccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcaacaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcctcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaatggggagtccttcacaggcaagctggcagaccaggcttctaaggct +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctctcgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagacaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcactaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaaccgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaaggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggcgctcccaag +ttattcaggtaga-gatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacgcttgcccccatgggaaacggaacggggcgtagg---------cg +cgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacacacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcggggacgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------aa +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtactaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>JN595867.1/1-7559 |Norovirus Hu/GII.4/New Orleans/2010/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacagc +a------ac----aacgacaccgaaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatccc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---ggatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccatcagcctcgctagagttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattagccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtactggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggagtccctgatactcttggcggaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagaaatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaattaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaatcgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaagctgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctcttggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtagact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aggccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaatgccccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccgaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgat---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaaccccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtggcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--atatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaatcttccttccaattcagtagcagtctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagggttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HQ392821.1/1-7548 |Norovirus pig/GII/Ch6/China/2009, complete genome +---gtgaaatgaagat---ggcgtctaac-gacgctaccactgcctcttgtggc------------gaaaac +a----ccactaagaaagacagtgacaagcccttttggagctttagctccaaaggggacttcttctccaacgt +taaagttggttttaagaaaaagactactaagactccaccagaggagccct---------------------- +---------------------tcatcccccctgatgatcggggtggggcggaac-------aggtccaaccc +ctc------------------------gaagaacccgcggata----------------------------c +caccctaaggtataacgcgcggga---taacacaattgaagggctccctgaacttgattacgtcgaaatgga +tgagaccaaggacaccgcctacgccgtcccaccactcaatttgcgagaacaccaaccagcgcccgaaccact +cccgggcgcgataatagagatgtgggatggcgagatttaccactatggtatctatgctggtggtggtaaagt +tctgggtgtgcacaaaccagcagccgccatctgcctggcgaccattgagctgacccccatctctctttactg +gagagtcgtctacacacccc---agaactccatccccatagattcactgcgccgcctggcaggcgagcgctt +tccttacacagcctttgataacaactgctacactttctgttgctgggttttggaccttaatgactcatggct +ctc---taggaggatggtcactaggaccactggtttctttaggccctaccaagactggaacaccaaacctgt +ccctacagtagatgacagcaagctgaaaaaggttgccaacgtgattctatgcggcctgacctcccttttctc +tagacccatcaaagacatagttgggaagcttaagccccttaacctcatcaatatactggcaacctgtgattg +gacttttggcggaattgtggagtcccttgtcctggtgggtgagcttttc---gggatcttctggacgccgcc +agatgttaccagttttcttgcttcaatcctagatgacttccagctccagggcccagaggatttagcagctga +ggtcgtcccagtacttatggggggtctcggattagtccttggcttcaccacagaaaagattgggcgcatgct +gtcatccgctgcttcgacgctgcgcgcctgtaaagaccttggggcctatggcctcgacatattgaagctggt +ggtcaagtggttcttcccgaaaaaggaggaacaagcagagcttgaaatggtgcgttcaatagaggacgccgt +tttggaccttgaggcgttggaaaacaaccacctcaccacccttcttaaggacaaggatagcctgacggcgtt +tatgaagactctcgatatggaggaagaaaaggcgcggaagctttcaacgcgctcgtcatcaccagatattgt +cggcaccataaacgccttgctcgccagaatttcagcagccaggtcgctcctacacaaggcacgggaagaact +ttgcgccaggattcgcccggtggtcgtcatgatctccggcagaccgggcataggcaaaacccacatggcccg +ccacttggcgcaaaaggtcgctgcggccattggtggcgacaaaaggatcggcttggtgcctaggaatggcgt +tgaccactgggacgcctacaagggagaacgcatagtcttgtgggatgattatggtatgagtaacccaatcaa +ggatgccttgacactccaggagttggccgacacgtgcccagtcaccctaaattgtgataggattgagaataa +gggtaaactctttgatagtgacatcattgtgataaccaccaatttgaccagccctgccccacttgactatgt +taattttgaggcttg-ctctagacgggtggacttcctggtctatgcggagtcacctgacgttgagaaggtga +agaaagagtttcctggccaacccgacatgtggaaggacgcttatcaacaggaccactcgcacatcaagctac +agctggcccctcaaggaggttttgataaaaatggtaacaccccttatggaaagggcgtgatgaagacactca +cccaaaactccctcgtggcgcgtgtcgccgccctcgtccatgagagggctgatgagttcgccctacggggtg +acgatctgcccctctacaacttcgatgtggacaagataaactccttcaggaagatggctgctgacaacagat +acgggttctttgagacaatgaaggtcggggctgctctgaaaaatgtggattcaatggagggtctcaagactg +ccctaaaaggggtcaccctgaaaccctgcaaggtggtttacaaggggacgatctaccagattgagtcaggcc +gt---ggcggactcgcggtcaagaagctagaggaccgctatgcccaaagctctggttccttatttggtgtgc +tcacgagagtccgccaggcgagagccaaatactaccttaaatgctttcaggagctgatttacaccaccctgc +agatcgctggggccgctttcgtgacatcgaggatagttagga------------------ggtctaactggt +gcaactcttggcgacaggcagctgagcc--cggcaccttggccccagccgaggagccactc---ccagca-- +caac--cccaag------actgggaggtcacccctgttgcggcagatcaggagggaaagaaggggaagaaca +aaaagggtcgtggaaagaaacacacggccttctccagcaagggactcagtgatgaggagtatgatgagtata +aaaggataagggaggaacgcgagggcaagtattccattgaagaatacctccgcgaccgagaccgctac---t +atgaagagctggccatcgcacaagcaacagaagagaacttcgcagaggatgatgagatgaggctccgccaga +gaattttcaggcccaccaagaagcagaggagggaggagagagccactcttggcttggtgtctggcactgaaa +tcagaaaaaggaaggctgatgacttccaacctaagggtaaactgtgggctgacgacagtcgtgaggtcgact +acaacgagaccatcaattttgaggccccatcaagcatctggtcacgtgtcgtcccctttggcaccggctggg +ccttctgggtgtccc-cgagccttttgattaccaccactcatgtcgtgcccaaggatacaaccgagatcttt +ggtgtgccaatcgcgcagattcaagtccataaatcaggcgagttttgccgcctgagattcccccgacctatg +aggactgatgtcaatggcctgatcttggaggagggcgcccccgagggcactgtttgcaccatccttattaag +agatccagtggagaactcctgccccttgcggtgagaatgggaacccacgccaccatgaagatacaaggcaga +acaattggcggccagatgggcatgctcctcactggggctaacgcaaagaacatggacctgggaactagtcct +ggagactgcggctgcccctacatatacaagaggggtaatgactttgtggtcgcgggggtgcacactgctgct +gcgaggggcggtaacacggtggtctgtgccactcagggtcctgatggtgaggccaccttagagggcggtgag +aaccacggcacttactgtggcgccccaatcttgggaccagggaaatctcccaagttgagcacaaagactaag +ttttggaggtcctccacggccccgcttccccctggaacctatgaaccagcctatctgggtgggagagacccc +cgcgtggaaaatggcccatcactacagcaggtcatgagagaccaacttaagcccttcaccgcccctagagga +aagccacctaaaccctctgtcctggactccgccaaggacaccatagtgaactttctggagcagacccttgaa +cccgctaaaaagtggagttactcacaggcttgccaatccttggacaagaccacctctagcggcgatccccac +catgttaggaagaatgaccattggaatggtgagaccttcacgggccctctggcagaccaggcctcaaaggct +aatctcctctacgagcagggtaaacatgtccaacccgtctacacggccgccctgaaggatgaacttgtcaag +accgaaaagatttacggcacagtgaagaagaggctcctctggggctcggacctgggcacgatgatcagatgt +gcacgagcctttggaggtttgatggaggagatgaaagagaactgcattctgctgccaatcagggtagggatg +aacatgaacgaggatggaccagctatcttcgagaggcacgcgcggcacacctaccactttgatgctgactac +t-cacggtgggactccacccaacaaagaggcatcctagccgccgcgttggacatcatgg-tgaagttttccg +ccgaaccggagct-agctcaggtggtggcggaggatctccttgcccccagcgtcctcgacgttggcgatttc +cgcatctctatcgtggagggcctcccctctggggtcccgtgtacatcacaatggaactcctttgcccattgg +ctgatcactctctgtgccatgtcagaagtgacgggtctctcacccgacgtgattcaggcccattcctgcttt +tccttctatggtgatgatgagatcgtgagcacggacatcactttggaccccaataaacttacagaaaaattg +aaagaatatggcctgaagccaactaggccagacaaaactgaaggacccttggtgatccagaagaacttggca +gggctaaccttcttgaggaggacgatagtccgcgacccagctggttggtttggtaagcttgacaaggactcc +atcttgaggcaactctactggaccagagggccaaaccatgaagaccccatggaaactatggtgccacattcg +caaagagcagtacaattgatggccctcctgggagaggcctcactgcatggttccaacttctacagcaaagtg +agcagaatggtaataaatgagataaaagaaggtggtctggaattttacgtgcccagacacgaagccatgttt +cgctggatgcggttctcagacctcagcacgtgggagggcgatcgcaatctggctcccaatggtgtgaatgaa +gatggcgtctaacgacgctgctccatctac---ggatggatctgccggtctcgtgccagaggtcaataacga +gactatggctttggaaccagttgtgggggctcctctcgctgctcctgtagctggccaacataatattataga +cccctggattaaaatgaattttgtgcaggcacccaatggagagtttacggtttcccctcggaatgcccccgg +tgaaattttgttagacttggaacttggccctgaccttaacccttatctttctcacctggcccgcatgtacaa +cggctatgcgggtggcatggaggtgcaggttgttttagcaggaaatgcttttactgc---cgggaagattat +ttttgctgctgttccacctaacttcccagcagagaacctcagtgccgcccaggttaccatgtgtccccatgt +gatagttgatgtcaggcaattggaaccagtcatgctccccatgcctgatattaggaacaaactatttcatta +caaccaagttgatgat---ccaaagcttagattgttggcttacctttacacaccccttcgagccaacaatgc +tggagatgatgttttcacggtttcttgccgggttcttactaggccaactcctgattttgagtttatgttttt +ggttccccccactgttgaatctaaaactaagcctttttctttacctagtcttacccttgatgaactttccaa +ttccagg---tttcctgcgcctatagtgcagctttacacaaaccctcatgacaacctggttgtgcaacccca +aaatgggaggtgcactatagatggcctcttgcagggcaccacacaactcgtgtcctgtaatgtttgcagttt +tagag-----------------------------------------g---gaccatcggtga---------- +----tggacagcc---ggcaag-cca----------------------------------------cagtga +ggaggagatcatg----------------------------------cccatg--------------gcctt +caacatccaacgtgagctcatgctagaaaaccttgatggctcaccctatgacccaactgatgacatccccgc +agtgctgggctcccctgactttcagggtgtcatatttggcatcctcagtcaga---ggaatgg--------- +--------------------tgatgggcaaacc--------agg-----------gcacatgaggccaaggt +ggacaccagggcggcccgcttcgcccctaaacttggctttgttgtggcca------------ctgtggagag +cacagactt---ccacgccaatcagcctagca---------------------------gattcacccctg- +--------ttgggttaggtggggatggcaatc------------aggactttgctcagtggaatctaccaac +ctacggtggcgcg-ctgacg------aacaacaccaacctcgccccacccgtgatgcccgtttacccagggg +agcaactcctattcttccgctcccagctaccgagc-tctggtggtgtggttg-------------------- +--gcgggtggctggattgcctgctccctcaggagtgggttcaacacttcttccaggagtcggccacctctca +aagcgatgtggccctagtcaggtatataaaccccaccacgggcagggtgctttttgaggcaaagttgcataa +acagggctttctcactgtggccgcctcgggttcttaccccttggttgttcccgccgatggttatttcagatt +tgagtcctgggtgaatcagttttatactttagcccccatgggaaatggtagtgggcgtagg---------ag +aaccc---------gttaatggcaggacaaattttattgggcttagctactgatcttattgggggtgggata +ggttctttaatcaatgctgg---tgctaatgcaattaatcagaaggttgagtatgattttaataagaag--- +------------------------------ttgcaatctttctcttttgcccatgataaagagatgctacaa +gcacaagtggatgcaactagacaattacagcaagatttgattcaattgaagcaagatactctgctttctgct +ggttatctccctgctgatgcagctagaggctctcttggtgtgcccatgactaaggctctggactggaatggt +acgagatactgggcacctaattctatgagcacctccagctattcagggcg---tttctctc----------- +-------------------gccccacttcaaacttgac-------------------------------ctt +ccag-------------------------aacccgcaacctcctcgcca----------------------- +---accacccaaggctc------------caacttccacttcggggtctacg------------------ag +cgcctct------------tcggt-----------ctcgtcagccccaactgtgtc---------------- +-------------------------------------aacagggctgtcca--------------------- +---gttc----t---tcca----------------------ctactccatcacggtcgtcaaggtcttcaac +caccacaga------------------------------------caggaccagagagtgggtggattcaca +gaac------ctaggcccctatatgg---atggtgccctgcagacggcgtttgttacacctccgtctagcag +gagctct---agtg------------------------------tcggca---cggtctcgaccgtgccaga +ctttgttttgga-ctcatggaccccttcct------------ttaacacgaggaggcaaccgctgtttgcac +acctacgcagacggggagagtcacaagcttaacagcttag--t-----------gaaagatagg-------- +-------gtt----------tt------------tctttttc---------tttcttttc------tgttcc +c------------------tgatctccaaaaaaa-------------aaaaaaaaaa--------------- +------------------------------------------------------------------------ +- +>HQ449728.1/1-7523 |Norovirus Hu/GII.12/HS210/2010/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttagtc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctacctgagctatccaccgtcaggcagcc +ggatgaggtaaacacagcatttagtgtccccccactcaaccagagggaaaatagggatgctaaagaaccgct +gcctggtaccatattggaaatgtgggacggagagatctaccactacggattgtacgtggagcggggtttggt +gcttggagtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctgaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcaacactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtgga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +atcatctgccgcgtccaccctcagagcttgtaaagaccttggggcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggatgcagt +gctggaccttgaagcaattgaaaacaatcacatgaccaccctactcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcactcctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaaggcccgttgttgttatgatatcaggaaagccaggaatagggaaaacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgataggattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaatagat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtactccatcatcc +aaattgctggagccgcgttcgtcaccacgcgcattgcaaagcgcatga------acatacaaaatctctggt +ccaaaccacaggtgggggatgagggaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacattaaagtcgaaggcaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcgggctggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaaatcgggcgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgtggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttgatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggtcccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggaaatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctccggggtgccttgcacatcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggtatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaggcccccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactctagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---ccaaggatgagacttgtggcaatgctctataccccccttagatctaatggttc +tggtgatgatgtattcactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccctatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgacaatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaattcaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacgctccccaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaggagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggcatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gcccaaattcaagccaccaaacagttacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggattggagcgga +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcataccaggaccgttgacctga---------------------------------c +taggaag----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--tagacccagttcta--ttgcctctactgtttctacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttacatga---gcggggcgctgcgtacagcctacgtgacacctccatctagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------ttaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatt- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HQ664990.1/1-7523 |Norovirus Hu/GII.12/HS206/2010/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggaattaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaagacgatgtagtggtg +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgtgacaaacacagcatttagtgtccccccactcaaccagagggaaaatagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagttctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcttcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggtgagacatt +cccttacacggcatttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggatgcagt +gctggaccttgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcactcctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaaaacccatcttgccag +agatttggcaaagaaagttgcagccacccttacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaacttggctaatccggcaccactggactatgt +caactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttaaacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgtagcccgcgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggacgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgcggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggcgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcttggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggcacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggagggaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcgac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaagtatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttgatggatgaactcaaggctcactgtgtcacactccccattagggtagggatg +aacatgaatgaggatggtcccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-tgaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgcgcgctctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgacccgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcgttacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggcggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggccaaaacaatgttataga +cccctggattagattaaactttgtgcaggcccccaatggagagtttacagtctcaccccgcaattcgcctgg +ggaagttctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgctgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaacttctttcacta +caatcagcaaaacgaa---ccgaggatgaggcttgtggcaatgctctataccccccttagatctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaagcctttcacactccctatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattgacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgacaatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttactctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcatag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcaatcgtgaacgccgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +tagaaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttctacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ccacttc--------------------------------------------cc------------------c +atcctc---------------------------------------tcggactagtgattgggtacgcagcca +aaacagagcactggagccttacatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HM748971.2/1-7560 |Norovirus Hu/GII.4/Beecroft/NSW305P/2009/AUS, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgccacttttaaacgaa----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggacgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctacaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaagcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtta------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaggggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtaggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccccagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataacgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcactactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggcgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgtaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctttgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcggggctccccc------------------ag +tatatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagggatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HM748972.2/1-7559 |Norovirus Hu/GII.4/Teralba/NSW881Z/2009/AUS, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggttgagttagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggttttttcaggccctaccaagactggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagtctcatgtgattg +gacctttgcaggtatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagttga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcttatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaagaggcaaatgggctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggatcgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactgcagggcc +cagctctcaccaccttcaatttcgatcgcaataaggtgcttgcctttagacagcttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactatgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattgccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gac----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaagggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattttgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcgggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggtaatgactatgtggtcattggggtccacacggctgcc +gcacgtggggggaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccggggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agggtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaaaccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcacacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacactt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctgtcccctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaaccttgtcccagaggtcaacaatga +agttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgattcccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcccgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtaccaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccggacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccaccccc--------- +ca---------------------gccctcggggacact---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctcc------------------ag +cacgtcct-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtgt-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccataacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HM748973.2/1-7560 |Norovirus Hu/GII.4/Turramurra/NSW892U/2009/AUS, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------ccccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggctttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgctgttgggtcctggacttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcactattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctgcagggacctgaggaccttgcggtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatctcggtgcatacgggctggagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctagatctcgaagcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcaggccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcccatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactacgt +caactttgaagcttg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaataccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcgtcagggctactccatgagaggctagatgaatttgaactacagggcc +caactcttaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcgcctctgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaagctgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaagggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagagaggaatggtaagtactccatagaagagtaccttcaggacagagacagatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctcttggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtttccc-ccagtttgttcataacatcaacacatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaagcaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacattactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaagagcatggatctgggtaccacacca +ggtgattgtggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggaggcaacactgtcatatgtgccacccaggggagcgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccaggaagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggacccc +agagtcaagggtggaccttcactgcagcaggtcatgagggatcagctgaagcctttcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagcttgcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagagacactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacatct-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggcgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagctcctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgtttccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgattttatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccata----------- +-----------ttacagg------------------------------------------------ca---- +-------gtcgta----------------------------------attacaca----------------- +----------------atgaatttggctactcaaaactggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgagccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaactcctcttcttcagatccactatgcccg------gatgcagcgggta------cccta--------- +--acatggatttggactgtctgctccctcaggaatgggtacagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaattcagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggttttggactggagtggg +actaggtactgggctcccgatgctagaactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaattttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +catacctt-----------ctaac------------tcttctactactactt-------------------- +----------ctgtgt-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----c--------ttttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>HM596590.4/1-7536 |Norovirus GII strain Hu/GII.P16-GII.5/RUS/Novosibirsk/Nsk-N490/2010, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgtcgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggcgaag---------------gcctatttacaaatat +gtcttctaccctaaagaaag----ccctcggggctcggcccaaacagcct-gcctcgagggacaactcacaa +aag---------------------ccctcaagaccaccaacgcccgagttggtc-------aagaaaatacc +ccc-----------------------------tcccccacctaatggcga---aaaagaagaaccagtaatt +aggtttgagg----------ttaa---gggtggagtctctggcttacccgaactcacgacagtcccccaacc +ggaaatgaccaatacggcattcagtgtaccaccgttgagcttgagagagagcagggaggccaaggaaccact +gactggggcaatactggagatgtgggatggagaaatataccactatggcttgtatgtggagaaaggcatggt +gttgggcgtgcacaaaccacctgcagctataagtatggcaaaagtggagatgacgccgctgtcattatactg +gcgtgtggtatatactcccc---agtacctcatctcccctgaaactctcaagaggctcaacggagaagcatt +cccttacactgcttttgacaacaactgttatgccttttgctgttgggtattagaccttaatgattcatggct +cag---cagaaggatggtgcagagaacaacaggtttctttagaccctaccaggagtggaacagaaagccctt +acccactgtggatgactctaaaattaagaaggtggcaaacatattcttatgctcattgtccacgctgttcac +caggcctataaaggacatcatagggaaaatcaaaccattaaacatcttgaacatcctggcaacgtgtgactg +gacgttcgccgggattgtagagtctctgatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgctcccttacttggtgaatacgagttgcaagggccagaagacatcgccgttga +acttgtgcctgtagtaatgggggggattggtttggtgctaggatttaccaaagagaaaattggcaaaatgtt +gtcctctgcagcgtcaacgctcagggcttgcaaagatcttggcgcctatggcttagagatactcaaattggt +catgaaatggtttttcccaaagaaagaagaggccaatgagctagccatggtgagagcaatagaggatgctgt +gctggatcttgaggcgatagagaacaaccacatgacagctctgctgaaagacaaagacagcctagcaaccta +catgaaaacactggatttggaggaagaaaaagccagaaggttgtctacaaaatctgcatcccctgatatagt +tgggacaattaatgccctattggcccgaatagcggcagctagatcactagtccacagggccaaagaggagct +gtctagcagaatcaggccagttgttgttatgatatctggcaagccagggataggcaagacccacctggccag +ggaggtggctagaaaggtggcatccaccctcactggggatcaaagagtcggactcataccgaggaatggtgt +ggaccattgggatgcgtacaaaggtgagagggtcgtgctgtgggatgactatggcatgagcaaccccatcca +tgatgccctgcgcatacaggaactggccgacacgtgtccccttaccttaaattgtgatagaattgaaaataa +gggaaaagtctttgatagtgaagtcataataatcacaacaaaccttgccaatccagctccccttgattatgt +caactttgaggcctg-ctccaggagaattgattttctggtgtatgccgacgcaccagaagtagaaaaggcaa +aacgagacttccctggccaaccagacatgtggaaagacgccttcaaagcggacttttcgcatatcaagttac +aacttgcgcctcagggcggctttgataagaatggcaataccccacatgggaagggtgtgatgaagaccctca +ctaccggttctctgattgcccgtgcgtcaggcctactgcatgagaggatggatgagtttgaactccagggcc +ccacaatcaccactttcaatttcgaccgaaacagaatcaccgcctttagacaattggctgcagaaaacaaat +atgggttggtggacaccatgagagttggcaaccaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaagaatgtaaccatcaagaggtgccagattatctacaatggttccacgttcgaccttgagtctgatg +gcaagggtaaagttttggtggaaaaggtcaaaaacacctctgtccaaaccaacaatgagctggccggagccc +tacatcacctcagaagtgctcgaattaggtattatgtcaagtgtgtgcaagaagcaatctactccatcctac +aaattgccggcgctgcattcgttaccacacgcattgcacgtcgcatga------acatacaagagctttggt +caaaaccaccact---agaccaaagcga--------accggaggttaaagaagaggcccccaagttagaa-- +-aat-------gatg---agttcatcatatcctccaaagacattaaggaggaaggaaagaagggcaaaaaca +aaaccggccgtggcaagaaacacactgcattttctagcaagggcttaagcgatgaggagtatgatgagtaca +agaggataagagaagaaagaaatgggaaatactctatagaggagtatcttcaagacagagacaggtac---t +atgaggaactcgccatcgccaaggccacggaggaagatttctgcgaggaggaagaaattaaaatccgccaga +ggatctttcgtcccaccagaaaacaaaggaaggaagaaagggccacgctagggctagtaactggttcagaaa +ttagaaagagaaaccctgatgacttcaaacctaaagggaaactgtgggcagacgacaacaggagtgttgact +acaacgaaaaattggactttgaggcccccccaagcatatggtctaggattgtgagttttggttctggttggg +gcttttgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaaatccaaattcacaagtcaggtgagttttgccggttcaggttcccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagaaggtgcgccagagggcaccgtggcaaccgtgctcattaaa +cgccccaccggagaactcatgcccctcgcagccagaatggggacacacgcaaccatgaaaattcaggggcgc +atggttggcggacaaatgggtatgttgctcactggttcaaatgctaagggcatggatttggggacaactcct +ggtgactgtgggtgcccgtacatctataaaaggggcaatgactatgtagtcattggagtgcacacagcagct +gcccgtggtggaaacactgtcatctgcgccacacagggaagtgaaggtgaggcgactctcgaaggtggagac +gataaaggaacatactgtggggcacccatcctgggtcctggaggggcaccaaaattgagcaccaagaccaaa +ttttggagatcatcaaacacgcctcttccaccagggacatacgagcccgcttaccttggtggtcgtgatcca +cgtgtaaagggtggaccctctttacagcaagtcatgagagaccagttaaagcctttcactgaacccaggggt +aaacccccaaagcccaatgtgctggaggcagctaaacaaaccatcatcaacgtcctcgagcaaactttggat +cccccacaaaagtggacatacgcacaggcgtgcgcttcacttgataagaccacctccagcgggtacccccat +cacgtccgaaagaatgaattctggaatggtgagaccttcactggcaagttggcagatcaagcgtcaaaagcg +aacttgatgtttgaggaagggaaacacatgacgccagtgtacacagcagccctcaaggatgagctggtcaag +actgacaaaatctatggaaagatcaagaaaagattgctctggggttctgacttgtccaccatgatccgatgt +gccagggcttttggtggactcatggatgagatgaaggcacactgcatatcactcccagtccgagttggtatg +aacatgaatgaggatggcccaataatatttgagaaacattccagatacaagtaccattatgatgcagactat +t-cccgctgggactcgacacaacagagggctgtcctagcagcggccttggaaataatgg-tcagattctctg +cagaaccacaact-ggcgcaaacagtcgctgaagacctgctggcccccagtgtggtggatgtaggagacttt +aaaatttcaataaacgaggggctcccttctggtgtgccatgcacttcccaatggaactccatcacgcattgg +ctactaactctttgtgctgtgtctgaagtcaccaacctgtcccctgacatcgtacaggcaaattccatgttc +tcattctacggtgatgacgagattgtcagtaccgatataaaattagaccctgaaaagttaactaccaaattg +agggagtatggtttgaaaccaacccgcccagataaaactgagggacccctgatcatcagtgaggatttggac +gggctcaccttcctccggaggacagttgcccgtgacccggctggctggtttggaaagttggatcaaagctca +atactgagacagatgtactggaccagaggaccaaaccacgaagatcccagtgaaacaatgataccccattct +caaagacccatacagctcatggcactgcttggcgaggcctctcttcacggaccatctttctacaacaagatt +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccaaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgctgccggcctcgtgccagaaagtaacaatga +ggcaatggctcttgaacccgtggcgggagcgtctctagccgcgcctgtcactggtcaaactaatataataga +cccctggatcagaactaattttgtccaagcccctaatggtgaatttacagtttcccctcgaaattcccctgg +agaaatattggtcaatttggagctgggtccagaattaaacccttatctggcacatttatctaggatgtacaa +tggttatgcaggtggtatggaggtgcaagtattgctcgcagggaacgcgttcactgc---tggtaagatcat +cttcgctgccgtgccaccttattttccagttgaaaatcttagcccttctcaaataacaatgttcccacatgt +gattattgatgttagaaccttggaacctgtgttactcccaatgcctgatgtcagaagtactttgtttcattt +caatcaaaaggatgaa---cctaaaatgaggcttattgctatgctttacactcctctccgctctaatggttc +tggtgatgatgttttcaccgtttcatgtaggatccttaccagaccttcccctgaatttgattttacatattt +agtgccaccaacagtagagtcaaagactaagcctttcacactgcctgtgctaacactgggagagctgtccaa +ctccaga---tttcccctctccattgatgagatggtcaccagtcctaatgagtccatagttgtccagccaca +gaatggcagagtcacgctggacggtgagctgttgggcacaactcaattgcaagcatgcaacatctgctcttt +gagag-----------------------------------------ggaggatcacagggc----------- +-----------aggttcc------------------------------------------------ca---- +-------atgaac----------------------------------aacac-------------------- +-------atgtggaacctgcagatcacaaacctaaatggtacacaatttgaccccacggatgatgtcccagc +cccccttggtgtgcccgattttgcaggtgaggtttttggtgtacttagtcaga---gaaacagg-------- +------------ggtgagggcaacccagcaaac--------agg-----------gctcacgatgcagtcgt +ggccacttatagtgacaagtacacccccaaattgggcttagtgcaaattggaa---------cttggaacac +caatgatgt---tgaa---aatcagccaacaa---------------------------aattcacaccaa- +--------ttggcctg---------aatgaggttagtgatggccatcggttcgaacagtggaccctgcctag +gtactctggtgcc-ctaact------ctaaatatgaacttggctcctgctgtagccccactctttcctggag +agcgccttctcttcttccgctcttatgtacca------ttgaaaggtggatt------tggga--------- +--accctgctatagattgtctggtgcctcaagaatgggtccaacacttctaccaggaatctgccccctctct +gggagacgtggccctagtcaggtatgtcaacccagacaccgggcgtgtcctctttgaggccaaactccacaa +gggtgggttcttaactgtgtcaagcaccagtacagggcctgttgtggtgccagccaatggttatttcagatt +tgattcttgggttaatcaattttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +atttc---------aataatggcaggagcttttatagcaggtttagcaggtgatgtgcttagtaatggcctc +ggttcgttgatcaatgccgg---agccaatgctattaatcaaagagcagaatatgattttaatagacaattg +cagcaaa---------------------------------attcttttaatcatgataaagaaatgttgaat +gcccagatccaagcaacaaaacaattgcaggctgatatgatagcaatcaaacaaggagtgctggctgctggg +ggcttttccccaactgacgcggccagaggagctgtcaatgcacccatgacccaagcactggattggagcggc +actaggtactgggcccctggatcaatgaagaccaccagctactctgggaagtttgtgtccatg--------- +aa---------------------ccctgtcaggcaggttgaattctcgc---------------------aa +cccagaa----------------agagtgcaactacaccatc--------aagtgc---------------- +------------------------------cagttctgtgtcttccggtaga------------------ac +taactcaa-----------caaac------------tccactcaatcaactgttgtca-------------- +----gtgcttcttcag-----tgccaccttc------cagaggctcccc----------------------- +------------------------tgcttcctctactttgtc------aaggg------------------c +tacagc---------------------------------------tagaacatccaattgggttgaagaaca +aaataggaatttggagccctacatga---agggtgccctccaaacagcatttgtcactcctccctccagcag +agcatct---agca------------------------------atggat---cagtctcaactgtaccaaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgctt +accttcgcaagaagggggagtcaca--------agcttag--t-----------gaaaagataatt------ +---a-g-tgg-ttaa-----ta-------------------------------------------------- +-------------attg---atcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>HQ169542.2/1-7547 |Norovirus Hu/GII.6/186/2005/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctacctctgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacaccaccccttccaataaagaagaggt------tggtgcattctccaacat +caaagttggacttaagaaaa----tgctgggtgccgtgcctaaaaacacc-------------aaagcaccc +agcgatga----------------ccggcactgccccacagttaagatcgggtccaaaacactagtgatccc +gcc-----------------------------agaacccccaaacgg------tgaggat------attgtg +cagttcgatg----------caaaatcagaaactgtacgtgggctacccgacctgacgacagt---gcagaa +tgaacatgagaacaccccgtacacagtccctccactgagtgaaagggaacacaggccagccgctgagccact +ccccggcacaatactagagatgtgggatggtgaattctaccattactccatctacgtcagcggaggcaaagc +tctgggggtgcacaaacccccagcggctataagcctcgcgacagtggaactcactcccatatccctttactg +gcgacctgtctacactccaa---actacctggtccacccagatacactgaagggtcttgctggtgaaaagtt +tccctacacggcctttagtaacaactgctacaatttctgttgttgggtgcttgagcttaacgacacgtggct +ttg---caggaggagtatatccagaaccactggcttctttaagccatatcagtcttggaacaggaagcccct +ccccaccattgatgatggaaaaatcaaaaaggtggccaatgcaattctctgcgcacttggctcattgttctc +aaagccaatcaaagacctactgggcaaactcaagccacttaacctactgcatctgcttgcgtcgtgtgactg +gacgtttgcgggtatagtagagacagtcatcttaatggcggaactcttc---aatgtgttctggaccccacc +tgatgtttccaatttcatagcctccttgataggtgattttcagttacaaggacccgaggacttggctgtgga +gctcgtccccgtggttatgggaggcataggaatggtcctcggtttcactgccgagaagattggccgcatgtt +gtcatctgctgcgtcaactctaagggcatgcaaagatctggggaactacgccctagacatactaaaactagt +tatgaagtggttctttccaaagaaagaagagaaggccgaaatggagaccttgagggcgattgaggatgccgt +attggacatggaggcaatagggaacaaccatctcacgacactcctcaaggacaaggacagccttactgcatt +tatgaaaaccctagacctagaggaggagaaagcaagaaagctatcaacgaagtcatcctcaccagatatcgt +cggcaccattaacgccatactggctagaatagcagccgctaggtccctcctacacaaggccaaggaagagat +gtttagcagaattagaccagtagttgtcatgatctcaggtagacctggtattggtaaaacccacatggcaag +gcatctggctaagagtatagccaacacaatgaatggagaccagagagttggacttgtcccgcgcaacggggt +tgaccactgggacgcttacaggggggagagagtggtcctgtgggacgactacggtatggggaaccctgtcaa +agatgccttgacactgcaagaactggccgacacctgtccagtcaccttgaactgtgataggattgagaataa +ggggaagatgtttgacagtgatgtcatcataatcacgaccaatttggtcaaccctgcacctctcgattatgt +gaacttcgaggcttg-ctccagaaggattgatttccttgtctatgcagagtcaccagagatagaaaaggtca +agagagacttccctggtcagcctgatatgtggaaagatcacttcaaaccggacttttcccacataaagctga +ctttggccccccagggcgggtttgacaagaatggcaacaccccacatggtaaaggcaccatgcgttctctaa +cccaggggtctctgactgcaagagtggcgggccttgttcatgagaggagagatgaattccagctgcaagggg +atagcctacagacatacaattttgataccaacagggtctctgcgtttaggaaactagccgcagataacaagt +atggaatcatggagacaatgagagtaggtgcggcactcaagaatgtcaagaccttggaagacctcagagttg +ctttgagagatgtaaaattcaatgaatgtgagatcatctacaggaacaccaagtaccgggtctcatctgatg +gtaaaggtacagtctctgttaacaaagtcgaggacctcacttcccaaaccgcaaacgaggtgagttcagccc +tcctcaggctcagacaagccagggccagatattatgtcagctgcttccaggaccttgtctacactctcatac +aggttgctggggcttcatttgtcgtca---------------acagga------tctccaagaggttctgct +gggagagatgggttaaaccgaccgagac-------------ccaggagacgagtgagcccga-----gaagg +aaactgcccagagtg---aatgggagattgaacccaaggacacagaaccagaaggtaagaagggcaagaaca +agaaaggaaggggcaagaaacacacagccttctccagtaaaggcctgagtgatgaagagtatgatgagtaca +aaaggattagggaagaaagaaatggaaagtactccattgaggaatacctccaagaccgtgaccgctac---t +acgaagaagtagcagttgcccgagcaacagaggaggacttctgtgaagaggaggaggccaagataaggcaaa +gaatcttccgcccaacaaggaagcaaagaaaagaggaaaggggtgtgctcggtctggttactggcacggata +tcaggaagagaagaccggatgacttccaaccaaagggcaatttgtgggcagatgacactaggagtgtggatt +acaatgagagacttgatttcgaggcccccccaagcgtgtggtcaaggatagtcccactgggcaccggctggg +gcttctgggtctcat-ccaacctcctaattacaacaacacatgtcctgcctaagggtattaaggaactcttc +ggcgtcgacgtcaaacaaatccaaatccacaaatctggagaattttgcaggtttagattcccaaaaccaatc +agaccagacgtctcagggcttgtattggaagaaggtgcaccagagggtactgtctgctccatactcgtgaag +agaccaacaggtgagatgatccctctagcggtgaggatgggcacgcatgcatctatgaaaatccagggcagg +actgttggtggccaaatgggtatgctcctcactggggcgaacgcgaagaacatggacctcggcaccggcccg +ggagattgcggttgcccatacatttacaagcgcggcaatgacatagtcgtggcaggtgttcataccgcagcg +gcccgaggaggcaacactgtcatctgtgccactcaagggcaggacggggaagcagttcttgaagggaatgag +agccttggcacttactgtggtgccccaatcctaggtcctggcaaggcgcccaagctcagcacgaagaccaag +ttctggcgctcatcgcctgatgccctgccacccggcacatatgaacctgcctacctaggaggcaaagacccc +agagtagagaagggaccttccctgcagcaagtcatgagggatcagttgaaacctttcacagaacccaggggc +aaaccaccaagacccacagtcctggaagaagctaaaaagacagtaatgaacgtcctggaacagaccattgac +cctgctaaaccgtggacttactcacaagcatgtgcttccttggataagactacttccagtggcagcccccat +cacatcagaaagaacgaccattggaacggagagtcttttacaggccccctcgcagaccaagcatccaaagct +aatctcatgtatgagcaggccaaacacatgcagcccgtgtacacagctgcacttaaggatgagctcgtcaaa +actgacaaaatctacaagaagataaagaagaggctcctatgggggtcggaccttggtacaatggtcaggtgc +gccagggcctttggtggtctcatggacagcatgaaagcaagttgcatagccctcccgtgcagagtgggaatg +aacatgaatgaggatggacctatcatttttgacaagcactctaaatacagataccattatgatgctgactac +t-ctaggtgggactcaactcaacaaagaagcatcttgtccgccgccatggacgtgatgg-tgcggttctctg +cggaaccagaatt-ggcacaagtagttgcagaggacctcttggcacccagccagctggacgttggcgacttt +gtcatctcagttcaggaaggcctgccatcaggagtcccatgtacgtcacaatggaattcaatagcccactgg +atcttgaccttgagtgcaatggcagaagtgtcaggcctctcgccagatgttgtgcaagcccattcctgcttc +tctttctatggtgatgatgagattgtgagcactgacatcaaccttgacccttcaaaactgacacagaaactc +agggagtatggtctggtccccacccgacctgacaaaactgaaggccccctggtcataactgaggacctcacc +ggcctaacattcctgcgcaggtcgatcgcgcgggatcccgctgggtggtttgggaagctggaccaagactca +atcctcagacagttgtactggacaagagggcccaaccatgagaacccatacgaaagtatggtcccccattcc +cagcgggccacacaactcatggcccttcttggagaagcctcactacacggaccccaattctacaagaaggtc +agtaagatggtcataagtgagatcaagagtggtggtctggagttttatgtgcccagacaagaggccatgttt +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgagagtgtgaatgat +gatggcgtcgaatgacgctgctccatccaa---tgatggtgctgccaacctcgtaccagaggccaacaatga +ggttatggcacttgaaccggtggtgggagcctcaattgcagctcctgtcgtcggtcaacaaaatataattga +cccctggattagagaaaattttgttcaggcaccacagggtgagtttactgtttcaccaagaaactcgcctgg +tgagatgcttttaaatcttgaattaggcccagagctcaatccttacctgagtcatttatcccgcatgtataa +tggttatgctggtggcatgcaggttcaggtggtcctagctgggaatgcgttcacagc---tggtaaaatcat +ctttgccgccgttccaccacatttccctgtagagaatattagtgcagcccaaatcacaatgtgcccccatgt +gattgttgatgtgagacagcttgagcctgtacttttgccccttcctgacataaggaatagattctttcacta +caaccaggaagacacc---ccccggatgagacttgtggccatgttgtacacacctcttagagc---aaactc +tggagaggacgtgttcacagtgtcttgcagggtcttgacccgcccagcccctgactttgagttcacgttctt +agtgccaccaaccgtagaatcaaagaccaagcctttcacactccctattttaaccctaggggaactatccaa +ctccaga---ttccctgctccaatagacatgctgtacacagatcccaatgagacaattgtagtacaaccaca +aaatggcagatgcactctagatgggacactccaagggaccacccagctggtgcccacccaaatttgctcttt +taggg-----------------------------------------gcacgttggtcagccaa--------- +----------acgtcgaggtct------gc----------------------------agattcaacag--- +--attcagctcca--------cgggtgagga----------------accatccc----------------- +----------cttcacgttcagctgaagaaccttgacgggacaccatatgacccaacagatgaggtaccggc +agttctgggtgccatagatttcaaaggaactgtgtttggagtcgctagccaga---gaaacaccacaggggg +-----ct---ctgtaggg---------gcgacc--------cgt-----------gcccatgaggtgcacat +agatactacaaaccctagatacaccccaaaacttggttctgtgttgat---gt---------attctgagtc +tagtgattt---tgatgatggacaaccgactc---------------------------gcttcaccccca- +--------tcggcatgggagcag---------------------atgattggcgccaatgggaattgcccga +atattctggtcac-cttact------cttaacatgaacctagcccccgcagttgcccctgctttccccggtg +agcgcatcctcttcttcaggtcagtggttccat------ctgctggtggtta------cggat--------- +--caggacaaatagactgcctcatcccacaggagtgggttcagcacttctaccaggaggccgccccatcaca +atctgcggtggctcttattagatatgttaaccctgacactgggagaaacatctttgaggcaaagctacatag +agaagggttcatcactgtggcaaattctggaaacaaccccatagtcgtgcccccaaatggttatttcaggtt +tgaggcctgggtcaatcaattttacacactcacccccatgggaactggacaggggcgtagg---------ag +agtcc---------aataatggcaggagccttctttgctggattagcaggcgacgccataacaaatggtgtc +gggtccctgattaacgctgg---ggccaacgcaatcaatcagaaggtagagtatgatttcaacaaacaa--- +------------------------------ctccaattggcatcctttaaacatgacaaggaaatgctacaa +tcacaagttctggccaccaaacagctccagcaggaaatgatgaatataaggcaaggggtcttgaccgctggc +ggcttttcccctacagatgccgcgagaggcgctgtaaacgcgccaatgacaaagattctggattggaatggc +acaagatattttgctccaaatagtatgaaaacaaccagttattcagg-tcagttttccagtaatcctgtgca +ta-----------ggcaacccactttgtcccgtc---ctgattc---------------------------c +caaa-------------------aagtcaaaattaat----------------------------------- +----------------------------------------------------------------------ag +tgattctg-----------ctagtatatatagttctatgtctactgctccttcac----------------- +---------------------aatcaaccca---ttcaatgattctgactt-------cagg--------gt +ctggatc----g---tccag-------------------gacaacctcctctc---------ccacagtgac +ttccac-------------------cct--------------atctaggaccagtgactgggtgagggggca +aaatgagaggcttagcccgttcatgg---atggtgctctccaaacgacttttgtcacaccaccatcgagcag +agcttca---tcaa------------------------------atgggt---cggtctcaaccgttcccaa +agctgttttgga-ctcctggactcctatgt------------ttaacacccataggcagcctctcttcgctc +acttgcgtaggcgaggggagtcaca--------agtttag--t-----------gaaaagattg-------- +-------att-aggt--------------------tttcttc------tc-ccttcttt---c---tccttt +t------------tctt-----tt------------------------------------------------ +------------------------------------------------------------------------ +- +>HQ009513.1/1-7558 |Norovirus Hu/GII.4/JB-15/KOR/2008, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aatagc +a------ac----aacgacaccgtaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +gga---------------------cccccacgaccacccactccagaactgatc-------aaaaatatccc +ccc-----------------------------tcctccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctatcattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgccagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagagactacacggagagacgtt +cccctatacagcctttgacaacaactgctacgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacagggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaagcaattgaaaacaaccatatgaccactttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgccag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caacttcgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccactttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggtaatgtgaaggttgacagagttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaagcctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggtaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaggtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccgagatccggcaaa +ggatcttcaggccgacaaggaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggttacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggtaaggatccc +agagtcaagggtgggccttcactacagcaggtcatgagggatcagctgaagccattcacagagcccaggggt +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgataagaccacctccagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggcaagattaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacgtaccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttcacaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcttgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcggcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggtactcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acgagggcagatggctcgacc--------cgt-----------ggccacaaagctacagt +gtacactgggagcgccgactttgctccaaaactgggtagagttcaatttgcca---------ccgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtaatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttatttcagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggatccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggga----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtactagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtctcc---------------------------------------------- +------------------------------------------------------------------------ +- +>AB541201.1/1-7509 |Norovirus Hu/GII-4/Aichi1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcctccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttctggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattacggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaagcatt +tccctacacagcctttgacaacaactgctacgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccctactacggatgactccaaattaaagaaggtagctaacatattcctgtgcactctgtcttcgctattcac +caggcccataaaagacataataggaaaggtaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggacgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcatgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgttaaaaccatgccagaacttaaacaag +cactcaataatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaaatgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggtaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcctccctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcactaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaatatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgccattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgtcaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaagtgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccctacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tatgatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccta +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggattggagcgga +acaaggtactgggtccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggcccc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttcgcacctttcatga---ggggggctcacaacgtatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541202.1/1-7509 |Norovirus Hu/GII-4/Aichi1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactagcaccactttccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaggatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccttaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttc +ggagtccccatcaaacaaattcaggtgcataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctatctgaagttacaaacttgtctcctgacaccatacaagctaattcccttttc +tctttttatggtgatgacgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattacagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtagtcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgtcagacaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtccctattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccggc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aataat------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaagcaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------actctcgggggcact---------------------------------a +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgttacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcttcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541203.1/1-7509 |Norovirus Hu/GII-4/Aichi2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcttgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgtagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541204.1/1-7509 |Norovirus Hu/GII-4/Aichi2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggagac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctaaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcaaaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacaacaaagctt +aaggaatacgggttgaaaccaacccgccctgataagactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcgagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaatacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttctctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagaactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541205.1/1-7509 |Norovirus Hu/GII-4/Aichi3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541206.1/1-7509 |Norovirus Hu/GII-4/Aichi3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctatacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatctcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagcgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaacttatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggagac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcat +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcaaaccaggcttccaaagcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacaacaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgtttaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttctctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagggctacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagaactcc------------------------------ +------------------------------tgcccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541207.1/1-7509 |Norovirus Hu/GII-4/Aichi4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccctcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541208.1/1-7509 |Norovirus Hu/GII-4/Aichi4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaagtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggagcgcgaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggcagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaataaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatta------acatccaagacttatggt +ccaagccacaggtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaggggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggctaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaggcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtagaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgaccccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcactgtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541209.1/1-7509 |Norovirus Hu/GII-4/Aichi5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgtttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541210.1/1-7509 |Norovirus Hu/GII-4/Aichi5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcgggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaatgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggttgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaagctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaactcgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcacttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541211.1/1-7509 |Norovirus Hu/GII-4/Akita1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttatctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccattcaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacata----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acgaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541212.1/1-7404 |Norovirus Hu/GII-4/Akita1/2008/JP genomic RNA, nearly complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------tttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaaccccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagagattacacggagaaacatt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaggtctgcttcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcatgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +catctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatac +agattgctggggctgcatttgtcaccacgcgcataatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaacgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaaactggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gcacgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattctaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccggatttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcgattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggacggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +accaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaagatactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541213.1/1-7509 |Norovirus Hu/GII-4/Akita2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcgtatagtg----------ccga---agatggcgtttccggtttgcccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctatatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatacgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcaggctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaggggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttagacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccgaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcccaaagggaaactgtgggctgatgatgacagaagtgtggact +acaatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaag +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggacgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcggccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttgcctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacggtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatctggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gagtcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------ggg--------ac +ttggttc--------tacagctggttctggcaccaatgccccgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggaaca +aaacagagatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541214.1/1-7509 |Norovirus Hu/GII-4/Akita3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccactcaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaaggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaaaacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggtccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541215.1/1-7509 |Norovirus Hu/GII-4/Akita3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcgtatagtg----------ccga---agatggcgtttccggtttgcccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctatatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatacgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcaggctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaaacccccacacgggaggggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttagacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccgaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcccaaagggaaactgtgggctgatgatgacagaagtgtggact +acaatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaag +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggacgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcggccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataactttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaataccatggagcgaacccttaggccctgatctgaatccctacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttgcctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacggtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatctggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gagtcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------ggg--------ac +ttggttc--------tacagctggttctggcaccaatgccccgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggaaca +aaacagagatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541216.1/1-7509 |Norovirus Hu/GII-4/Akita4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcgtatagtg----------ccga---agatggcgtttccggtttgcccgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctatatgttgagcgaggtcttgt +gctgggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggtatagtggaatccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatacgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcaggctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgagacgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaggggcgtcatgaagaccctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +caactcttgccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaac +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttagacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccgaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcatacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccatcgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcccaaagggaaactgtgggctgatgatgacagaagtgtggact +acaatgaaaaacttagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaag +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagttgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggacgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttt +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctttgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcggccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacttatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttgcctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacggtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatctggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcacc---------------------------------g +ccaggaa----------------gagtcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------ggg--------ac +ttggttc--------tacagctggttctggcaccaatgccccgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggaaca +aaacagagatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541217.1/1-7509 |Norovirus Hu/GII-4/Akita5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctagggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactttgaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactagactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccccatcaagcaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcataaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +gactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541218.1/1-7509 |Norovirus Hu/GII-4/Aomori1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgaa----ccttcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggatgacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541219.1/1-7509 |Norovirus Hu/GII-4/Aomori1/2008/JP genomic RNA, complete genome +--------atgaaaag---agggtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaggtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctagcaaccta +catgagaacccttgaccttgaggaggagaaagccaggagactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcctatcca +cgatgccctcaggttacaagaactcgctgacacttgccccctcaccttaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgctcgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaagcaag +cactcaagaatatcacaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcgaaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacagctgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaattcccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcgagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccgg- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccgggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541220.1/1-7509 |Norovirus Hu/GII-4/Aomori2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagctagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcagatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggttaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactttataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggatctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagatcgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttccatgg---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541221.1/1-7404 |Norovirus Hu/GII-4/Aomori2/2008/JP genomic RNA, nearly complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +----------tttaaacgag----ccctcgggacgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcgggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctagcaaccta +catgagaacccttgaccttgaggaggagaaagccaggagactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcctatcca +cgatgccctcaggttacaagaactcgctgacacttgccccctcaccttaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgctcgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcgaaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacagctgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaattcccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcgagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccgg- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccgggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541222.1/1-7509 |Norovirus Hu/GII-4/Aomori3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcctccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcattaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgtcc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagctcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaacaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541223.1/1-7509 |Norovirus Hu/GII-4/Aomori3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaggtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacagg +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagagacaaatac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcgccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtttg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagtcaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgttattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcacggc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttaccwgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgatttgatatttga +cacgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541224.1/1-7509 |Norovirus Hu/GII-4/Aomori4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgtcgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccctaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541225.1/1-7509 |Norovirus Hu/GII-4/Aomori4/2008/JP genomic RNA, complete genome +--------atgaagaa---tgggtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aagtgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gttgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccctgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctatacagccttcgacaacaactgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacgactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttctttccgaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagccttgcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccctctcactctaaattgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcactaccaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +aagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaaaggcaatgtaaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagagtcaggtactatgtcaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtaa------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccagaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaggacttctgtgaggaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtctagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaagtttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtggcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +agggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgagaccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacagg +agatgattt---tcaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +agcaggctatgtcacagtggctcacaccggccagcacgatttggtcatcccccccaatggttactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaagcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagactttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagtcaaccccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541226.1/1-7509 |Norovirus Hu/GII-4/Aomori5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttatctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccagtacggccttcagtgtccctccactcaatcaggggaagagtagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggatccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccattcaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacata----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttacccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acgaggtactgggcccctgatgctaggactacaacgtacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541227.1/1-7509 |Norovirus Hu/GII-4/Aomori5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagatataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaagaagagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgatacttgcccccttactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttccgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtatccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaata +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagttatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgtgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccacttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tatagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aaaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541228.1/1-7509 |Norovirus Hu/GII-4/Chiba1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaggatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactagctatggtgagatccatcgaggatgcagt +actggaccttgaggcaatcgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgttatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggctgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaatgtgaccccagtttacacaggtgcacttaaggatgaattagtcaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctcaggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgtcagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtttcgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcccttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacacaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccctacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541229.1/1-7509 |Norovirus Hu/GII-4/Chiba1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatatttctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgctttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agatcgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacagggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggtctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gaaacaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541230.1/1-7509 |Norovirus Hu/GII-4/Chiba2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaagtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcgatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggtcaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541231.1/1-7509 |Norovirus Hu/GII-4/Chiba2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagaaaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +cggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctaacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgttaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tacaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaatacagagga--------ggccaccaacaaggacgggtgcccaaaacttaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtacctccaggacagggacaaatac---t +acgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +ataatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgagggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggacccc +agggtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagagacttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcgtcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +ccgaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaggacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagtcaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccgcttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgctgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaacgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcataccggccagcatgatttggtcatcccccccaatggttatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccgtttttccaccccc--------- +ca---------------------accttcggggatact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctgctgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggaccaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgttt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541232.1/1-7509 |Norovirus Hu/GII-4/Chiba4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaagtgccgcaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagaccagtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacggcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcaat +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcctgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatattaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagtcgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgtctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcacacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcgaaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgccgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccccggtggagagttcacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccctaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------actctcgggggcact---------------------------------g +ccaggaa----------------gaattaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctagt------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +agctgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541233.1/1-7497 |Norovirus Hu/GII-4/Chiba4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctaccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gttgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccctgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctatacagccttcgacaacaactgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacgactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttctttccgaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaatcatatgaccaccttgctcaaagataaagacagcctagcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccctctcactctaaattgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcatcatcactaccaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtaaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagagtcaggtactatgtcaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtaa------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccagaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtctagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcatacctcagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgt +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggtccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaagtttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtagtggcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctttgtgcactctctgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagtaaagctt +agggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatctctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgagaccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttgactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +agcaggctatgtcacagtggctcacaccggccagcacgatttggtcatcccccccaatggttactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctaaccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaagcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaagactttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagtcaaccccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ta------------gcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctctccgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541234.1/1-7509 |Norovirus Hu/GII-4/Chiba5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagagaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcggggtcttgt +gttgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgagctaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaaccctcgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----atagagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgattttggaagaaggtgcgcccgaaggcaccgtggtcacattactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccaactgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcattcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatcattcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggcgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgttgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtggcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcccttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttgggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------gattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttactcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------cataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaagagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541235.1/1-7509 |Norovirus Hu/GII-4/Chiba5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacattatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagtcgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgtgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-agctcaggtagtcgcagaagaccttctctctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactacttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541236.1/1-7509 |Norovirus Hu/GII-4/Ehime1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttatctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctcaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagagatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccattcaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtccaggaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacata----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtgga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacacccctatgacaaaggctttggactggagcgga +acgaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541237.1/1-7509 |Norovirus Hu/GII-4/Ehime1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaggtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gaccggaaccattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaggaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaagggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaggtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gcacgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacattct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttacccgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttactggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgactttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgcccggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541238.1/1-7509 |Norovirus Hu/GII-4/Ehime2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccccctactccagaactggta-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagaggtcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagtaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggacttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaactttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtattgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtcccctcc------------------ag +tatatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541239.1/1-7509 |Norovirus Hu/GII-4/Ehime3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccccctactccagaactggta-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagaggtcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagtaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggacttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaactttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtattgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtcccctcc------------------ag +tatatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541240.1/1-7509 |Norovirus Hu/GII-4/Ehime3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgaaaataa +aggaaaggtctttgacagtgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattga +cactggctccacagggtggatttgataagaacgctaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggacgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaggccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatatcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaataaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagcttcgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccaccctactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctacgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacattgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacaactc +tcaagacccatacaattgatgtccttactaggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggtcaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccccggtggagagttcacagtgtcccctagaaacgctcccag +tgaaatactatggagcgcgcccttaggccctgacctgaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctataaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagattcaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccaaaatgaaccccaacaatgggtgctcccagg +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagctcccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaaatcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541241.1/1-7509 |Norovirus Hu/GII-4/Ehime4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggta-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgaacgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactccac---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacattatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcagactgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgagaaacttagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgttataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggaacgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgctgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaggcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagtaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccacgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccccgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaactttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaactggaacctgtattgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacaattgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-ggtgtc------cataatgtacacctggcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------ggtgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgttcgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtcccctcc------------------ag +tatatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541242.1/1-7509 |Norovirus Hu/GII-4/Ehime4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacggccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaagtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatta------acatccaagacttatggt +ccaagccacaggtggaaaacatagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaggggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactacttatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaggcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcatccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcactgtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541243.1/1-7509 |Norovirus Hu/GII-4/Ehime5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacggc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtctccggtttacctgagctttccaccgtcaggcaacc +ggaagaaatcaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgctaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagagattacacggagaaacatt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggcagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggatcttggtgcatatgggctagagatcctaaagttggt +tatgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaataaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaagggaagact +ttccagcagaccaagacctgtagtcatgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagaaaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccgcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaaccccatcca +tcgtagcctcaggctgcaagaactcgctgacacctgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtatatgcagaagcccccgaggtcgagaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgctttcagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +catctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatac +agattgctggggctgcatttgtcaccacgcgcataatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtagaaaccacagagga--------ggctatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagagca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gcacgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgtgcactctctgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacaacaaagctt +aaggagtatggattgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +ataatcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgttcaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaataccatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcgattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggacggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctatttcaggtt +tgactcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactaaaaagttgcaacatgaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaagatactgggcccctgatgctaggactacaacatacagtgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541244.1/1-7509 |Norovirus Hu/GII-4/Fukui1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agtgatgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttggtagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtgggtgcacctacacacttgagtctgatg +gcaagggcagtgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggggcgccagaatcaggtactatgtcaagtgtgtccagggggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgggg------aacatcaagacttattgt +ccaagccacaagtggaaaacacaaggga--------ggccacacacaaggagcggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgaggataagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaga +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcgtaacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagacaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattcccccctct +caaagacccatacaattgatgtccttactgggagrggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaggaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +gggtatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctcccag +tgaaatactatggagcgcgtccttaggtcctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggaaatggctcgacc--------cgt-----------ggccataaagccacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-agtgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggtcaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541245.1/1-7509 |Norovirus Hu/GII-4/Fukui2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgttgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgagaacaaat +acgggttgatggacacgatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggtaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatt +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttaagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatatcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541246.1/1-7509 |Norovirus Hu/GII-4/Fukui2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agc---------------------ccctcacgaccacccactccagagctggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcgtagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctggagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgccgctgcacgctccctggtgcaccgagcaaaagaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtaggccaggaatagggaagacccatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgactttccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctagccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtatacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggtatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggcgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcactaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagactacttctagcggccatccgcac +cacatgcggaagaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctgatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacttgtccccagatatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +agggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +attcgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccctttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaaccaagccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcactactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagcgttcaatttggta---------ctgatacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagctcccaatttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttctcttcaacacgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaagactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctc-----------ccagt------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541247.1/1-7509 |Norovirus Hu/GII-4/Fukui4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcagcc +ggaagaagccaatacggccttcagtgtccctccactcaatcagagggaaaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgctattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaagaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtgctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgcatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagagacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaagggtaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcagggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccgagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaaccgatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccgactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaagtgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtcaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaaattgcaacaggaaatgatgaaggtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541248.1/1-7509 |Norovirus Hu/GII-4/Fukui4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtctacctgagctttccaccgttaggcaacc +ggaagaaaccaatacggctttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcataaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacacctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaacaggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggacgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctagcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgttaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaattaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agaccggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcattaaa +aggcctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacattatacaggctaattctcttttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaagccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcggagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcacccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tagttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggtaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---tctaccattaagttgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgttatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttagatccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggccttggactggagcgga +acaaggtactgggcccctgacgccaggaccacaacacacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggaatcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ccaat------------gcttccactgctgctt-------------------- +----------ccatac-----acttaaatca------aactgtttcaac----------gag--------gc +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggagggtagagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541249.1/1-7509 |Norovirus Hu/GII-4/Fukui5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactgacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaagctatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaaaacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggcccccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgtttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541250.1/1-7509 |Norovirus Hu/GII-4/Fukui5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacactcctc---agcacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaagtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacgcttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatta------acatccaagacttatggt +ccaagccacaggtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaggggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaggcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcactgtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------actacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaagacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaacccaaaagttgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541251.1/1-7509 |Norovirus Hu/GII-4/Hiroshima1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agacggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccctcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggccatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggacagtctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +aacgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaattttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacccagagga--------ggctaccaacaaagacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggccgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtggc +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcgcacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggtttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctagggactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcttacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgtttttccacccct--------- +ca---------------------atcttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggccccccc------------------ag +cacatctt-----------ctaat------------gcttctactgccactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggacca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541252.1/1-7509 |Norovirus Hu/GII-4/Hiroshima1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctagcat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatacctcaa +aga---------------------cccccacgaccacctactccagaactggcc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcaaagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggccttgt +gctgggcgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatttctccagacactctcaagagattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatggactagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcctatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaagcga +agcgcgacttcccgggccagcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacggtaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctatattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacggatgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggccggccggggcaagaaccccacagccttctcaagtaaaggtctcagagatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaatccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctgggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggccatccgcac +cacacacggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggttcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgaaaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaccacaacaaagagccgggctgggagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtggcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagatttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcctgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttattgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagttgggcagtgttcaatttggta---------ctgatacaga +aaacgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaatttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatcctgacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcaacatgatttggtcatcccccccaatggctactttaggtt +tgactcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagcaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---agggggctcacaacatatcgtttgtcaccccaccatctagcag +accctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541253.1/1-7509 |Norovirus Hu/GII-4/Hiroshima2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaagagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaacaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaaatctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gttgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgactg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagatcttaaacaag +cgctcaagaatatctcaatcaagaagtgccagattgtgtatggtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctataatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccgacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaag +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggatt +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgactgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcgccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctaaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctctagcggccatccgcac +cacatgcggaaaaacgattgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaag +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggatttagcaaccatgatccggtgt +gcccgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgccctagaaatcatgg-ttaaattctcct +cagaaccacatct-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +actatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaagctggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttagaaataacttctatcatta +taatcagtcgaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggacgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtaggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccacaaagctacagt +ttacactgggagtgccccttttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacccatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcattccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtagg---------cg +tgctt---------tataatggctggagccttctttgctggactggcatctgatgtccttagctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccgcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaatttgtcaccattcatga---ggggggctcacaacatatcgtttgttaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcccctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541254.1/1-7509 |Norovirus Hu/GII-4/Hiroshima2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctagcat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcaaagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggccttgt +gctgggcgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtggctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatgggggaaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagagggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggagaagct +ttccagcagacccagacctgtagtcttgataatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgaccagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaagggccgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaatccagaggacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctgggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagcggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aaccttatgtttgaagaagggaagaacatgaccccagtctacacaggtgcactcaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggttcggatttagcaaccatgatccggtgt +gttcgagcattcggaggcctgatggatgaactcaaagcccactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggacggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctttagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagatttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaagagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgaaagcccctggtggagagttcacagtatcccctagaaactctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---gggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcctgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttattgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaagttccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagttgggcagtgttcaatttggca---------ctgatacaga +aaacgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaatttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatcctgacacgggtagggtcctgtttgagtgcaaactacataa +atcaggctatgtcacagtggctcacaccggtcaacatgatttggtcatcccccccaatggctactttaggtt +tgactcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tgtaatggctggagctttctttgctggactggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagcaatctacaacaggcttcctttcaacatgataaagaaatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgagagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtgggacaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---agggggctcacaacatatcgtttgtcaccccaccatctagcag +accctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541255.1/1-7509 |Norovirus Hu/GII-4/Hiroshima3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttctctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagagaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcggggtcttgt +gttgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaaccctcgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaaaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggctattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacattactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccaactgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatcattcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggcgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgttgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtggcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaactggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcccttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttgggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------gattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacagtgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgttt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaagagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------a +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541256.1/1-7509 |Norovirus Hu/GII-4/Hiroshima3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgctttcgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-gccccgagggaaataccacag +aga---------------------cccccacgaccacctactccggaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtatacctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaacactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcatggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgattttgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagc +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgtaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaaatgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------gactaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagtgccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agagtcaagggtggcccctcgttacagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattttacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcgaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccagcaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctaatcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaaagttgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggtctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgttcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttccactgcttctt-------------------- +----------ctatac-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgagaggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541257.1/1-7509 |Norovirus Hu/GII-4/Hiroshima4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaggtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggaaaatagagatgctaaggaaccact +gaccggaaccattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagattctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaag +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gcacgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgct------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541258.1/1-7509 |Norovirus Hu/GII-4/Hiroshima4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactagctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcctgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcttccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggatgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagctcccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgagagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggcttgcgctc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaggtgtgttcagaaagccctgtattcttatatcc +gagttgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaaccaaaa-- +-gat----gccgggg---agttcgtcatatcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaagagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaag +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgctgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-tgaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagatttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatggagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcactgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taaccagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgayccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccgaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaacacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccacagaaatgaaccccaacaakgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgcctgtagccccacttttccaggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541259.1/1-7509 |Norovirus Hu/GII-4/Hiroshima5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaagcgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +actcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaatccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctccctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaaaccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaagctgaggataagaaaggcaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcggctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcataggggtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtaaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaataat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccatcaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaagttccatc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagargcagcyccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaaaattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaac------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---gaggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541260.1/1-7509 |Norovirus Hu/GII-4/Hokkaido1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctctcacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggtccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgcggctattgcggcgcctgtagcggcccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccccagaaacgctccaag +tgaaatactatggagcgcgcctttaggccctgatctgaacccctacctatctcattttgccagaatgtataa +ttgttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541261.1/1-7509 |Norovirus Hu/GII-4/Hokkaido1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaggtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagctctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctagcaaccta +catgagaacccttgaccttgaggaggagaaagccaggagactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +ccactattcgcatgcgtacaagcgggagagggtcgtcctatggtacgaatatggtatgagcaatcctatcca +aggtcccctcacgttactagaactcgctgacacttgccccctcaccttaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagcatcgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgctcgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcgaaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaatccccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccgggattcc------------------------------ +------------------------------tacccccgttcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541262.1/1-7509 |Norovirus Hu/GII-4/Hokkaido2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttatctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaatatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaaggaaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggcgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcaacaagtcatgagggaccaactgaaaccattcacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccattcaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatttgtacctt +cagag-----------------------------------------gggatgtcacccacg----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacata----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acgaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagacttcc------------------------------ +------------------------------gacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541263.1/1-7509 |Norovirus Hu/GII-4/Hokkaido2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gttgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcttggcttcatgcgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcgatgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgtcccctcactctaaattgtgacagaattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacagggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acggtttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgaaggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggttacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgcc +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagttatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatggccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaaccgaaggacctcttgttatttctgaagatttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacgttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcccgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccgtttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaagg---ttccctattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacgtctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggtttggcgtctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagctttcttaaagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggctatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ctaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggccccccc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcactaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541264.1/1-7509 |Norovirus Hu/GII-4/Hokkaido3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------agaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcgtttctggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtcgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggaggatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaagttaaagaaggtggctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagaggtcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcgcgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagaggatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaagcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctctgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaggcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcgttcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgactac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgac---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataacgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatatttct +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccagtcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtggcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagtgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaacccagacacgggaagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttattccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgctcccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggac----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggttccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541265.1/1-7509 |Norovirus Hu/GII-4/Hokkaido4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatgccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaaccggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgatttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ctactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttgggaggcagctcaaggatgttaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgctc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagatttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaatccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaactcacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgactgcggctgtccctacatctacaagagaggaaatgactatgtggttattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccattatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactttccgaagttacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccggg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcctagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgggttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcatttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatctggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccaatttagcagtaatctacaacaggcttcttttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaacca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aattgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541266.1/1-7509 |Norovirus Hu/GII-4/Hokkaido4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaggtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcataaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtggctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttactcaaagacaaagatagtctagcaaccta +catgagaacccttgaccttgaggaggagaaagccaggagactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcctatcca +cgatgccctcaggttacaagaactcgctgacacttgccccctcaccttaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgctcgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgacggtaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttagaaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccctcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcgaaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggcagtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggatcagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaatccccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctaggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataacgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaggagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccgggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541267.1/1-7509 |Norovirus Hu/GII-4/Hokkaido5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatacaacaa +aga---------------------cccccccgaccacctactccagaattggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgataacaattgttacgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaactaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaagggcctgaggaccttgcagtgga +gctcgtccccgtagtgatgggggggattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatagaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaaatggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgagaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagctctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaacacctcaatcaagaggtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctaactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagtaaggacgggtgcccaaaacccaaa-- +-gat----gatgggg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agagaattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtccacaagtcaggcgagttttgtcgcttgagatttccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +agatccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggagcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccagaggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcattaatgtccttgagcaaacaattgat +ccacctgagaagtggtcattcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcctccaaggcc +aatctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aacatgaatgaggatggccccattatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacaaagagccgtgttggcggcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggctcaggtagtcgcggaagacctcctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaagttggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaagactgagggaccccttgtcatctctgaagacttgaat +ggcttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggtttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgactttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ctcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgacggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagagatcccagc +ccctctgggaactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtacttccaaa +ttattcaggtaga-gatagt------cacaatgtgcacttagcccccgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatctggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgacgtggctctactaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccca--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaattttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctct------------------ag +tacacctt-----------ctaac------------tcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aggaactaggagctgggtcgagggtca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541268.1/1-7509 |Norovirus Hu/GII-4/Hokkaido5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +ttttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactgacttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaggctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatacgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagttggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +aaaggattagagaagaaaggaacggtaagtattctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggccattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgatcccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttctgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +attcgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgtacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaatacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtaatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541269.1/1-7509 |Norovirus Hu/GII-4/Iwate1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaacaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacatggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagtgccgtccttcgcctcgactatgtcctgagcaataccatcca +cgaggccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagagcgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgttagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtgggtgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaaacctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtaccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtggtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541270.1/1-7509 |Norovirus Hu/GII-4/Iwate2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------agaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctagggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactttgaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactagactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgtcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtaygatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcataaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggctcacaccggccagtatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaatgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +gactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +accctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541271.1/1-7509 |Norovirus Hu/GII-4/Iwate3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtaccccatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatccgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaacaccgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagaattatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaaggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttccagcggctatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aaccgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagagatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541272.1/1-7509 |Norovirus Hu/GII-4/Iwate3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccatccaacgg------agaggatgacatagtggtt +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctttatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaacctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagcggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccacgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacgcttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactacgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacaggaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcggtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattagcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacagacttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +cacatctt-----------ctagc------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcacccccccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541273.1/1-7509 |Norovirus Hu/GII-4/Iwate4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------ccccaacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaggaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaacgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcgatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgcct +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcgagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggacgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagtgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccggctggttggtttggaaagctggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggctgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagagattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacacacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------aag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541274.1/1-7509 |Norovirus Hu/GII-4/Iwate4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +tcccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgttattcac +caggcctataaaagatttaatagggaagctaagacctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcaacctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------ggctaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaacggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541275.1/1-7506 |Norovirus Hu/GII-4/Iwate5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaggtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggtaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaagacccc +ccc-----------------------------tcccccacccaacgg------agaggatgacgtagtggtt +tcttatagtg----------ccaa---agatggcgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatccaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaaatctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccaaacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctctct---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggcttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtggtcgcagaagaccttctctctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccacctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaatccccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------gctacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tcaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctg---ctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctctcggctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541276.1/1-7509 |Norovirus Hu/GII-4/Iwate5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagatataataggaaagttgaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaagaagagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgatacttgcccccttactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttccgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtatccaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaata +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagttatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaactatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaggaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccagcctcgtcccagaggtcagcaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggtcaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaataattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggccctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacactcgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcaggccacttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tgcccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tatagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541277.1/1-7509 |Norovirus Hu/GII-4/Kumamoto1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccaccgactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccgcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttmtgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacaccatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541278.1/1-7509 |Norovirus Hu/GII-4/Kumamoto2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccgcgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacaccatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541279.1/1-7509 |Norovirus Hu/GII-4/Kumamoto3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaaccggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggcgatttcgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaggttggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgaggtccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagactcaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ctactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgctc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagatttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaatccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggataaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcaaaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatggtccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccattatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactttccgaagttacaaatttgtccccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcctagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatctggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccgag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccaatttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaattaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aattgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541280.1/1-7509 |Norovirus Hu/GII-4/Kumamoto4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaaattagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cgctggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggttgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagacctacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacgaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcagccttaggccctgatctgaatccctatctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541281.1/1-7509 |Norovirus Hu/GII-4/Miyagi1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaacatcgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaaggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaacaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttacgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541282.1/1-7509 |Norovirus Hu/GII-4/Miyagi2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgatctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaaggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggaggagagagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541283.1/1-7509 |Norovirus Hu/GII-4/Miyagi3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatctc +ggaggccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacactccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacatagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaaggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagaactaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctattt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------atggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541284.1/1-7509 |Norovirus Hu/GII-4/Miyagi5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctaaccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatcagctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagtcgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgttaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agtctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtttccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcatggtggatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagtcttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagatacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccctaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tatagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggagatacgagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541285.1/1-7509 |Norovirus Hu/GII-4/Miyazaki10/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatatcacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggggaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggtacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgagtcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggtcctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541286.1/1-7509 |Norovirus Hu/GII-4/Miyazaki12/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactagtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtatacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agaaaattagagaggataggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccctatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaaacatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgctacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggatcttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctaggaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtggtcctcgcggggaacgcgttcaccgc---cggaaaagttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaaatcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatctggattgcctactcccccaggagtgggtacagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagatacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcagggttcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541287.1/1-7509 |Norovirus Hu/GII-4/Miyazaki13/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactagtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtatacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccctatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaaacatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgctacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggatcttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctaggaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtggtcctcgcggggaacgcgttcaccgc---cggaaaagttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaaatcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatctggattgcctactcccccaggagtgggtacagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagatacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcagggttcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541288.1/1-7509 |Norovirus Hu/GII-4/Miyazaki1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactagtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtatacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccctatcaaacaaattcaggtatacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaaacatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgctacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggatcttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctaggaacgctccagg +tgaaataccatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtggtcctcgcggggaacgcgttcaccgc---cggaaaagttat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaaatcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatctggattgcctactcccccaggagtgggtacagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagatacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcagggttcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541289.1/1-7509 |Norovirus Hu/GII-4/Miyazaki1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttctcttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541290.1/1-7509 |Norovirus Hu/GII-4/Miyazaki2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactagtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccacttttcctgttctg +gagacctgtatacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagtatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccctatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaaacatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgctacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggatcttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttgggaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctaggaacgctccagg +tgaaatactatggagcgctcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtggtcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaaatcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatctggattgcctactcccccaggagtgggtacagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagatacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtgatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcagggttcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcaccttccatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541291.1/1-7509 |Norovirus Hu/GII-4/Miyazaki2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541292.1/1-7509 |Norovirus Hu/GII-4/Miyazaki3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagagacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctcttaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacctaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggggatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcgtctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgaggttctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +attcgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ctggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541293.1/1-7509 |Norovirus Hu/GII-4/Miyazaki3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgaccactgggacgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +ggacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccgacaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541294.1/1-7509 |Norovirus Hu/GII-4/Miyazaki4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacgccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggcctttagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgaggtctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcaggacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacggatgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agacaggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgagatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaccaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatgg---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541295.1/1-7509 |Norovirus Hu/GII-4/Miyazaki4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541296.1/1-7509 |Norovirus Hu/GII-4/Miyazaki5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacgccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggcctttagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcggggatcgcggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgaggtctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacggatgcccaagacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agacaggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgagatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaactttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcatccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaccaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctacat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aaccgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatgg---ggggggctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541297.1/1-7509 |Norovirus Hu/GII-4/Miyazaki6/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541298.1/1-7509 |Norovirus Hu/GII-4/Miyazaki7/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaagtcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +tcccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaagaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgcttaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgaactggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagctcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctcg +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggacttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagacgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +gacaccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgacttggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatactcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------atcttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctaccgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcttct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541299.1/1-7509 |Norovirus Hu/GII-4/Miyazaki8/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatatcacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggggaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggtacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacactctctatactttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggtcctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541300.1/1-7263 |Norovirus Hu/GII-4/Miyazaki9/2008/JP genomic RNA, nearly complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +---tatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggggaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaactaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatgkttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggtacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccccgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggtcctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541301.1/1-7509 |Norovirus Hu/GII-4/Nagano1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaattcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcgatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttagaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaactggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggtcaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541302.1/1-7509 |Norovirus Hu/GII-4/Nagano1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagagctggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacgctcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaatcgag +cactggctccgcaaggtggctttgataagaacgggaaacacccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaaaaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgccactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cggtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541303.1/1-7509 |Norovirus Hu/GII-4/Nagano2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttataatg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcggggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatactaaagttagt +catgaagtggttcttcccgaagaaagaggaggccaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctta +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaacaatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacctgtggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatattgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggaggtcgtccacagtaccgctcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgaaatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctgaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaaggcagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgtctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcactccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541304.1/1-7509 |Norovirus Hu/GII-4/Nagano2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttctgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagagtagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacatggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaaatggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +gggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ctaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccagatacagataccattatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccgacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaaattgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541305.1/1-7512 |Norovirus Hu/GII-4/Nagano3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagttctctttgggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagaaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccagggaggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541306.1/1-7509 |Norovirus Hu/GII-4/Nagano3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagcgggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactagctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctcttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcctgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcttccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggatgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgataggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagctcccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcaaaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaatccaaa-- +-gat----attgagg---agtttgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcgtctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-taaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgcgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgagaccaacccgccctgataaaactgaaggacctcttgttatttctgaagatttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaagttggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatggagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcactgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taaccagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagacgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtcccctgtcaatatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccaggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541307.1/1-7509 |Norovirus Hu/GII-4/Nagano4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcaccctgtcctcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcctaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagagagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacattatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +ttttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacagcttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaactccataa +accaggctatgtcacagtggctcacaccggccagcatgatttggttatcccctccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcagatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541308.1/1-7509 |Norovirus Hu/GII-4/Nagano5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagctttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagcgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagagtcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactttaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtatctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacaggagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggatcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatatgttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcacacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541309.1/1-7509 |Norovirus Hu/GII-4/Niigata1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattacggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcctataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactgcagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcatctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaggcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagccccaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aaactggccgtggcaagaagcacacggccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccattaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggaatgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgagctcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggaatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctaaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acgaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctgggttggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgatttcgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggcttcccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541310.1/1-7509 |Norovirus Hu/GII-4/Niigata1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgact-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgccagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaacggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttacgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacactacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatgaggtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacaggttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtctcattttttactggtgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccaccccc--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +catttctt-----------ctaac------------ttttttactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtttcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatgg---agggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541311.1/1-7509 |Norovirus Hu/GII-4/Niigata2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-tccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccttgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gcttgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctgacaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcgcctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctctctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaagtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggggcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataatccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgagccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccgacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcctg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +tcaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541312.1/1-7509 |Norovirus Hu/GII-4/Niigata2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggactaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaacggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaactcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttacgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgattgcatattaga +cctaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541313.1/1-7509 |Norovirus Hu/GII-4/Niigata3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcggggatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +tatgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagaccccccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcgctccacggtccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgagatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttagttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatgg---ggggggctcacgacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541314.1/1-7509 |Norovirus Hu/GII-4/Niigata3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattttggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcaccctgtcctcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcctaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaggaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaacttatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agcaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacattatacaggctaattcactcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatctcctagaaacgctccagg +tgaaatactatggagcgcgcccttaggtcctgatctgaatccctacctatctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagattat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagttgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatatgctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacagcttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaactccataa +accaggctatgtcacagtggctcacaccggccagcatgatttggttatcccctccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcaccttttatga---agggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagtttttga-atcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541315.1/1-7509 |Norovirus Hu/GII-4/Niigata4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctctccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcggggaaagcggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagattcggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaggtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggtccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgagatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagttgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacacagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacacacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgccactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttagttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541316.1/1-7509 |Norovirus Hu/GII-4/Niigata4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ttaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctaggtgtgcacaaacccccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcagttgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactctatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagtaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atggatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccgccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541317.1/1-7509 |Norovirus Hu/GII-4/Niigata5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gaa---taggagaatgattcagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattccatcggctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agatcgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagatcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggcagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttgttgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctaccgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541318.1/1-7509 |Norovirus Hu/GII-4/Niigata5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttataatg----------ttaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggaaaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggccttgt +tctaggtgtgcacaaaccaccagctgccatcagcctcgccagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctccccagacgctctcaataaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtctggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctgaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagaccggtggtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcattgggatgcgtacaagggggagagggtcgttctgtgggacgactatggaatgagcaatcccatcca +cgatgctctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttttcacacataaagctaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcgatcaagaagtgccagatagtgtatagtggtagcacctacacactcgagtctgatg +gcaagggcaatgtgaaggttgacagagttcaaagcacctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaacggtaagtactctatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacaggagtgtggact +acaacgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcagttttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacgtcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccttagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgcgggggcaacactgtcatatgtgccacccaggggagtgagggagaggccacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacttacgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aggccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccacccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggttcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atacttaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaatttcgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactgtggagcgcgcccttaggtcctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccctacccgatgttaggaataatttctatcacta +caaccaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggccactcaaaattggaacagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcta---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtaatactgcccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccctgctcgaggctcctcc------------------ag +catatctt-----------ctaac------------tcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactatttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541319.1/1-7509 |Norovirus Hu/GII-4/Osaka1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcctacagcg----------ccaa---agatggcgtttccggcctgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggaaccact +aactggaacaattattgagatgtgggatggagaaatataccactacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagaggacaacaggtttcttcaggccataccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtggctaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacattctcaacattctggctacgtgcgattg +gaccttcgcaggcatagtggagtccttgatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actagtcccaatagtgatggggggaataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcctgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttctttccaaagaaagaggaagcaaacgaattggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgcgtgggtctcatcccgcgcaatggtgt +cgaccattgggacgcgtacaagggagaaagggttgtcctgtgggacgactatggaatgagtaaccccatcca +tgctagcctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgaggtggaaaaagcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaagaccctca +ctactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caactctcaccactttcaactttgaccgcaacaagatccttgctttcagacagcttgctgctgaaaacaagt +atgggctcatggacacaatgagagttggaaaacagctcagggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtctcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcactgtactccattatcc +aaattgctggggctgcatttgtcaccacgcgcattactaagcgcatga------acatacagaacctctggt +ccaagccacaggtggaggacacagaaga--------ggcggccagcaaagatggttgctcaagacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggccgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacacatgtcataccccaaggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccggttaagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggggaactcatgcctctggcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +acagtcggaggacaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggactgatagggaagccacacttgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccaaaactcagtactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatctcttgacaaaaccacttccagcggccatccgcac +catatgcggaagaatgactgttggaacggggagtcattcacaggaaaattggcagatcaggcctccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacattgtgtcaccctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaaatagttgcagaagacctactttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccaatggaattccatcgcccattgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaattcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaagttggatccagagaaactgacgggaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agtaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggtaatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaatgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagttccacctaactttccaactgaaggcttgagccctagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caaccagtcaaatgac---cctaccattaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgactttgacttcatatttct +ggtaccaccaacagttgaatcaagaaccaaaccatttaccgttccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaacggcaggtgcacgactgatggcgtgctcttaggtaccacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctgggcaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagtgatggctcgacc--------cgc-----------ggccacaaggccacagt +gctcactgggagtgccgacttcgccccaaaattgggcagagttcaattcgcca---------ctgacacaga +caacgattt---cgaatctggtcaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggatggctccactacccaccgaaatgaacctcaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagcccctgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctagattgcttgctcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctctttgagtgcaagctccataa +atcaggatatgtcacagtggctcacactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttctttccagtttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +tcaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggttcctct------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtat-----gttcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------agggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541320.1/1-7509 |Norovirus Hu/GII-4/Osaka1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +gctaggtgttcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttttggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaataggaaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattcccttttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgcgtcaagaactaaaccattctctgtcccgtcagttactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccggc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccactgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccacagtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541321.1/1-7509 |Norovirus Hu/GII-4/Osaka2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggaagaactagtggtt +tcctacagcg----------ccaa---agatggcgtttccggcctgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggaaccact +aactggaacaattattgagatgtgggatggagaaatataccactacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagaggacaacaggtttcttcaggccataccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtggctaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacattctcaacattctggctacgtgcgattg +gaccttcgcaggcatagtggagtccttgatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actagtcccaatagtgatggggggaataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcctgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttctttccaaagaaagaggaagcaaacgaattggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgcgtgggtctcatcccgcgcaatggtgt +cgaccattgggacgcgtacaagggagaaagggttgtcctgtgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgaggtggaaaaagcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaagaccctca +ctactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caactctcaccactttcaactttgaccgcaacaagatccttgctttcagacagcttgctgctgaaaacaagt +atgggctcatggacacaatgagagttggaaaacagctcagggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtctcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaaggacagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcactgtactccattatcc +aaattgctggggctgcatttgtcaccacgcgcattactaagcgcatga------acatacagaacctctggt +ccaagccacaggtggaggacacagaaga--------ggcggccagcaaagatggttgctcaagacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggccgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacacatgtcataccccagggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccggttaagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggggaactcatgcctctggcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttggaggacaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgaaggggaagccacacttgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccaaaactcagtactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatctcttgacaaaaccacttccagcggccatccgcac +catatgcggaagaatgactgttggaacggggagtcattcacaggaaaattggcagatcaggcctccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgactatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacattgtgtcaccctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaaatagttgcagaagacctactttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccaatggaattccatcgcccattgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaattcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaagttggatccagagaaactgacgggaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agtaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggtaatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtccccccagaatgctcccag +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccacctaactttccaactgaaggcttgagccctagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caaccagtcaaatgac---cctaccattaaattgatagcaatgttgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgactttgacttcatatttct +ggtaccaccaacagttgaatcaagaaccaaaccatttaccgttccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaacggcaggtgcacgactgatggcgtgctcttaggtaccacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctgggcaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagtgatggctcgacc--------cgc-----------ggccacaaggccacagt +gctcactgggagtgccgacttcgccccaaaattgggcagagttcaattcgcca---------ctgacacaga +caacgattt---cgaatctggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggatggctccactacccaccgaaatgaacctcaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagcccctgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctagattgcttgctcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctctttgagtgcaagctccataa +atcaggatatgtcacagtggctcacactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttctttccagtttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +tcaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggttcctct------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------agggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541322.1/1-7509 |Norovirus Hu/GII-4/Osaka2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactgatt-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------tcaa---agatggtgtctctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtagagcgaggtcttgt +gctaggtgttcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactttccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtaga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaataggaaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcctatcca +cgatgccctcagattgcaagaactcgctgacacttgtcccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagctcaagcaag +cactcaagaatatttcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcgagcgcatga------acatacaaaacctatggt +ctaagccacaagtggaaaatacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgaag---agttcgtcatttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgaataca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgagaatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggagcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggcccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcttcccttgacaagaccacctccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgacgccagtctatacagctgcgcttaaggacgaattagttaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactctaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattcccttttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgccatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggctactcaaaattggaacagttatgacccaacagaagaaatcccggc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaagggcagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgattttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgatactgcccaccgaaatgaacctcaacaatgggtgctcccaag +ttactcaggcaga-aatagt------cacaatgtgcacctggcccccactgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--atatggatttggactgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagccccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacatctt-----------ctaac------------tcttctactgctacct-------------------- +----------ctgtgt-----actcaaatca------aactacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541323.1/1-7509 |Norovirus Hu/GII-4/Osaka3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggaagaactagtggtt +tcctacagcg----------ccaa---agatggcgtttccggcctgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggaaccact +aactggaacaattattgagatgtgggatggagaaatataccactacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagaggacaacaggtttcttcaggccataccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtggctaacatattcttgtgcactttgtcttcactattcac +caggcccattaaggacataatagggaagttgaaacctcttaacattctcaacattctggctacgtgcgattg +gaccttcgcaggcatagtggagtccttgatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actagtcccaatagtgatggggggaataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcctgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttctttccaaagaaagaggaagcaaacgaattggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgcgtgggtctcatcccgcgcaatggtgt +cgaccattgggacgcgtacaagggagaaagggttgtcctgtgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgaggtggaaaaagcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaagaccctca +ctactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaactgcaaggcc +caactctcaccactttcaactttgaccgcaacaagatccttgctttcagacagcttgctgctgaaaacaagt +atgggctcatggacacaatgagagttggaaaacagctcagggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtctcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcactgtactccattatcc +aaattgctggggctgcatttgtcaccacgcgcattactaagcgcatga------acatacagaacctctggt +ccaagccacaggtggaggacacagaaga--------ggcggccagcaaagatggttgctcaagacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtatgatgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggccgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacacatgtcataccccagggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccggttaagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggggaactcatgcctctggcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttggaggacaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgaaggggaagccacacttgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccaaaactcagtactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatctcttgacaaaaccacttccagcggccatccgcac +catatgcggaagaatgactgttggaacggggagtcattcacaggaaaattggcagatcaggcctccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgactatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacattgtgtcaccctacctatcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaaatagttgcagaagacctactttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccaatggaattccatcgcccattgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaattcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaagttggatccagagaaactgacgggaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agtaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggtaatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaatgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccacctaactttccaactgaaggcttgagccctagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caaccagtcaaatgac---cctaccattaaattgatagcaatgttgtacacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgactttgacttcatatttct +ggtaccaccaacagttgaatcaagaaccaaaccatttaccgttccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaacggcaggtgcacgactgatggcgtgctcttaggtaccacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctgggcaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagtgatggctcgacc--------cgc-----------ggccacaaggccacagt +gctcactgggagtgccgacttcgccccaaaattgggcagagttcaattcgcca---------ctgacacaga +caacgattt---cgaatctggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggatggctccactacccaccgaaatgaacctcaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagcccctgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctagattgcttgctcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctctttgagtgcaagctccataa +atcaggatatgtcacagtggctcacactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctg---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttctttccagtttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +tcaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggttcctct------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------agggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541324.1/1-7509 |Norovirus Hu/GII-4/Osaka3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacaac +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccag---agatggcatttccggtttacctgagctctccaccgtcaggcaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccttgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcgggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgatttcgagttacaaggacctgaggatcttgtagtgga +gctcgtccctgtagtaatgggggggattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtccgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaagaagggact +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccattca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccccaaggtggctttgataagaacgggaacacccccaccgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggsatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctctccaccttcaactttgatcgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagatacaatgaaagttgggaggcagctcaaggatgtcacaaccatgtcagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccatattgtgtacagtggttgcacttacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacacgcatcatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaagggagggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaaaaggggaaag +aaacaggccgcggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagtaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagagaacagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactgcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccggagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaagggcctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +cgagatattgtggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacctttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaagagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggttatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgattaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aaccgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541325.1/1-7509 |Norovirus Hu/GII-4/Osaka4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtgtgctatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaattaccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcctacagcg----------ccaa---agatggcgtttccggcctgcccgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggaaccact +aactggaacaattattgagatgtgggatggagaaatataccactacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gagacctgtatacacccccc---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtattagacctaaacgactcatggct +aag---caggagaatgattcagaggacaacaggtttcttcaggccataccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtggctaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacattctcaacattctggctacgtgcgattg +gaccttcgcaggcatagtggagtccttgatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actagtcccagtagtgatggggggaataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcctgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttctttccaaagaaagaggaagcaaacgaattggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagaact +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgcgtgggtctcatcccgcgcaatggtgt +cgaccattgggacgcgtacaagggagaaagggttgtcctgtgggacgactatggaatgagtaaccccatcca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaagctcctgaggtggaaaaagcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaagaccctca +ctactggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caactctcaccactttcaactttgaccgcaacaagatccttgctttcagacagcttgctgctgaaaacaagt +atgggctcatggacacaatgagagttggaaaacagctcagggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtctcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcactgtactccattatcc +aaattgctggggctgcatttgtcaccacgcgcattactaagcgcatga------acatacagaacctctggt +ccaagccacaggtggaggacacagaaga--------ggcggccagcaaagatggttgctcaagacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggaatatgatgagtaca +agagaatcagagaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtac---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaattttcagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggccgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacacatgtcataccccaaggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccggttaagattcccaaaaccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggggaactcatgcctctggcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttggaggacaaatgggcatgctcctgacaggatccaacgccaagagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccacacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgaaggggaagccacacttgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccaaaactcagtactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatctcttgacaaaaccacttccagcggccatccgcac +catatgcggaagaatgactgttggaacggggagtcattcacaggaaaattggcagatcaggcctccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaactggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacattgtgtcaccctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaaatagttgcagaagacctactttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccaatggaattccatcgcccattgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcatccaggccaattcccttttc +tccttctatggtgatgatgagattgtgagtacagacataaagttggatccagagaaactgacgggaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggacccctcgttatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +attctcaggcagatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcactccacggcccggcattctatagtaaaatt +agtaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggtaatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccccagaaatgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagttccacctaactttccaactgaaggcttgagccctagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caaccagtcaaatgac---cctaccattaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgactttgacttcatatttct +ggtaccaccaacagttgaatcaagaaccaaaccatttaccgttccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaacggcaggtgcacgactgatggcgtgctcttaggtaccacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctgggcaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagtgatggctcgacc--------cgc-----------ggccacaaggccacagt +gctcactgggagtgccgacttcgccccaaaattgggcagagttcaattcgcca---------ctgacacaga +caacgattt---cgaatctggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggatggctccactacccaccgaaatgaacctcaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagcccctgctgttgcccccacttacccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctagattgcttgctcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctctttgagtgcaagctccataa +atcaggatatgtcacagtggctcacactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctg---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttctttccagtttagcagcaatctgcaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +tcaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggttcctct------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------agggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541326.1/1-7509 |Norovirus Hu/GII-4/Osaka4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccatcagcctcgccaaggtcgaattgacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccagggatagggaagacccaccttgctag +ggaagtggccaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaacgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtagact +acaatgaaaaactcagttttgaggctccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagttaagggtggcccctcgttgcagcaagtcatgagggaccagctaaaaccatttacggagcctaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacgcttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggaagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttacggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttagactggagcgga +acaaggtactgggcccctgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ctaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tatatctt-----------ccaat------------gcttctactgctgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541327.1/1-7509 |Norovirus Hu/GII-4/Osaka5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtgggtgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcaaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcgccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggtcgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541328.1/1-7509 |Norovirus Hu/GII-4/Osaka5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacggccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaagtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggacgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggagggcctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatta------acaccaaagacttatggt +ccaagccacaggtggaaaccacaaagga--------ggccaccaacaaggaccggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaagggaaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaggcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaagtc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcactgtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgaggtttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcggggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541329.1/1-7509 |Norovirus Hu/GII-4/Osaka6/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agc---------------------cccccacgaccacccactccagagctggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +gggaagaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcgtagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctggagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgccgctgcacgctccctggtgcaccgagcaaaagaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtaggccaggaatagggaagacccatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgactttccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctagccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtatacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctgtcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagtgtaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggcgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcactaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctgatggatgaactcaaagcacactgcgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagtgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacttgtccccagatatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +agggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +attcgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccctttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaaccaagccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcactactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagcgttcaatttggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagctcccaatttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactactacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctc-----------ccagt------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541330.1/1-7509 |Norovirus Hu/GII-4/Saga1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaagacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +agggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccatttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaagttg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcataacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541331.1/1-7509 |Norovirus Hu/GII-4/Saga1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacggccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---aaatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagcgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagagatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctctttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccaaagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattctaagttaaagaaagcagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacgtcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccctgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaagatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagataaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaggccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cattggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgttatgaagactctta +ccactggctctctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctcgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaggttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatta------acatccaagacttatggt +ccaagccacaggtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaggggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgctagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcacccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacgggtaagctagcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcttaatggatgagctcaaggcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagaccttctttcccctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctc +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcactgtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggcgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctgggctt +ggctccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacaggaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggaacgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcagtcccaggactcc------------------------------ +------------------------------tactcccgctcgtggctccccc------------------ag +tacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541332.1/1-7509 |Norovirus Hu/GII-4/Saga2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaacagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtagtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggaagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggagagagggtcgtcctatgggacgactatggcatgagcaatcccatcca +cgacgccctcaggctgcaggaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgatttcccgggccaacctgacatgtggaaaaacgcttttaactctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccttgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aaactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagcgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcactacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcatcactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaagccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcttgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaacgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgttgatccccttacctgacgttaggaataatttctatcacta +taatcagtcaaatgat---tccaccattaaactgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attataca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggggtgccccctttactccaaagctgggcagcgctcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +cgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctccggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcctagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggcgttggactggagcgga +acaaggtattgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541333.1/1-7509 |Norovirus Hu/GII-4/Saga2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctagatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtggccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgatgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgctcactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttagaccctgatctgaatccctacctatctcaattggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541334.1/1-7509 |Norovirus Hu/GII-4/Saga3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------agatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtattctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcagactgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccaggatcaggtactatgtcaagtgtgttcaggaggccctgtactctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agctaccaacaaggacgggtgcccaaaacccaaa-- +-gaa----aatgagg---agttcgtcatttcttctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcctagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaaaccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggctgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcacctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccactcaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcgca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgtaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagcaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaatcccaggactcc------------------------------ +------------------------------tacccccgttcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541335.1/1-7509 |Norovirus Hu/GII-4/Saga4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgttcccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaaatctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcgggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggttgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgacgtgactggcatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattttcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaagctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtagtctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541336.1/1-7509 |Norovirus Hu/GII-4/Saga4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctaggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacgccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggatcttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgttggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccgcaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccacgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggagacagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggctgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaagatgcgccagaatcaggtattatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaagccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttgggggtcagatgggcatgctcctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgattatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgaaggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaatttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggtacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaaaatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaaaaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagatcttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +ctcctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctatagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +gaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccatcgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaagcagctccggcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattttacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagtagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaagcaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggagcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctacta-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---gaggggctcacaacatatcatttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtga-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541337.1/1-7509 |Norovirus Hu/GII-4/Saga5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaacagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtagtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgttcccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattttggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggaagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagatcagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggagagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaggaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaagtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgatttcccgggccaacctgacatgtggaaaaacgcttttaactctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aaactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagcgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctcct-ctagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaagccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcttgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaacgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccccagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cgggaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgttgatccccttacctgacgttaggaataatttctatcacta +taatcagtcaaatgat---tccaccattaaactgatagcaatgctgtatacaccacttagggccaataacgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagagatgaccaa +ttcaaga---ttccccatccctttggaaaagttgttcacgggtcccagcggtgcctttgtcgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attataca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagcgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcacgatttggtcatcccccccaatggctattttaggtt +cgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctccggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggcgttggactggagcgga +acaaggtattgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctgtac-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctgggctggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541338.1/1-7509 |Norovirus Hu/GII-4/Saga5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaaccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggcttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +aaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattgaagaaggtagctaacatattcctatgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagctacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcgaccta +tatgagaacccttgacctcgaggaagagaaagccagaaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggccaagagaatcgcagcatccctcacaggagaccagcgtgtaggcctcattccacgcaatggtgt +cgatcactgggatgcgtacaagggggagagggtcgtcctgtgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactaccaacctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttccctggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaattaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagaattcagagcgcctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccgcaagtggaaaacacagagga--------ggccgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgacgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactacgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcagggaccct +agagtcaaggatggcccctcgttgcagcaaatcatgagggaccagctgaagccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaggctgccaagaaaaccattatcaatgtccttgaacaaacaattgac +ccgcctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgagctcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcggctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccgatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccagcaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttccctcacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctatatacaccacttagggctaacaatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagtcgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgccttcgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggtagtgttcagttcagta---------ctgatacaga +aaatgattt---cgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctacgtcacagtggctcataccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggtaaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcagtcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgcccggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ccatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541339.1/1-7509 |Norovirus Hu/GII-4/Sakai1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggtcttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaggaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagctctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggtcctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +catatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaggatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagccggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagacggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtaacaccacccaccggaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctc-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagttccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctaacag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541340.1/1-7509 |Norovirus Hu/GII-4/Sakai1/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggta-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaagttacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctgttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgaggatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctctctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagctccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagtcctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagactggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagagtatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgtcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgagccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacttcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgatccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccttacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +agtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcctg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +tcaggaa----------------gaatcaatcccaggacccc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541341.1/1-7509 |Norovirus Hu/GII-4/Sakai2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccattcaatcagagggaaaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcacgaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaggaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagctctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaagccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgagaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +catatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaggatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacggattgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagccggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactcc +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctaccacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagacggttcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtaacaccacccaccggaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaactg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctc-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagttccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctag +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541342.1/1-7509 |Norovirus Hu/GII-4/Sakai3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaggtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaatagaaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacccgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctagggttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgatacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattagatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgcct +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcgtcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgacgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccatcaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccgaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaataccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtatcactatgatgctgattac +t-ctaggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcatggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaactttctacagtaaaatc +agcaaattagtcattgcagagctaaaagagggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgccttcaggccctgatctgaatccctacctatctcatttggccagaatgtttaa +tgattatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccatat +aatagtagatgttaggcaattggaacccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgggtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaattttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaactatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggtcataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaagctcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcccacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccaccccc--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541343.1/1-7509 |Norovirus Hu/GII-4/Sakai3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------agcagc +a------ac----aacgacaccgaaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtcccaccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaagatcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtctttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actagaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcaagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttctagcagaccaagacctgtagtcttgatgatatcgggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cggctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcattcgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaagctgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaagtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggtgaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagtaccaaaaccaaa +ttctggagatcatctacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +aggatcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgatcccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcgacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctctgaggttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggaccccttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaataatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagtagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttatactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaactcatcaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacttagcccctgctgtagcccccacttttccgggtg +aacaacttctcttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggaagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagccttctttgctggattggcatctgatgtccttagctctgggctt +ggttccctaatcaatgccgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaggtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------aa +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggctctggcaccaatgtctcgagtctcccgt------------------c +agttgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541344.1/1-7509 |Norovirus Hu/GII-4/Sakai4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggttctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgcttttcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcatgtaaagatcttggtgcatatgggctagagatcctaaagttaat +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaagggaaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaactctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcacccaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctcccct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541345.1/1-7509 |Norovirus Hu/GII-4/Sakai4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +agc---------------------ccctcacgaccacccactccagagctggtc-------aaaaaggtccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtggctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcgtagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctggagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctagcgagaatcgccgctgcacgctccctggtgcaccgagcaaaagaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggtaggccaggaatagggaagacccatcttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtataagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtacgcagaagcccccgaggtcgaaaaggcga +agcgcgactttccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgctagccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgtcagaactcaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtatacagtggttgcacctacacacttgagtctgatg +gcaagggtaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcattaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagatttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaagaatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggtatgatcttggaagaaggtgcgcctgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggcgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcactaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagactacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgaaaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctgatggatgaactcaaagcacactgcgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccttgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaacttgtccccagatatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattggacccagagaagctgacagcaaagctt +agggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgactcgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +attcgcagcagtcccaccaaactttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattagaacctgtgttgatccctttacctgatgttaggaataacttctatcacta +caatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaaccaagccattcactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcactactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------cccgca----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattatgacccaacagaagaaattccagc +ccccctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagcgttcaatttggta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ctattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagctcccaatttcccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcacaa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaaccaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacacgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctc-----------ccagt------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacccttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtag-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541346.1/1-7509 |Norovirus Hu/GII-4/Shimane1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaaaaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaaccctagacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcgggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgccgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-cccggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctct------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541347.1/1-7509 |Norovirus Hu/GII-4/Shimane2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgtt------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctccccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctatcaagattggaataggaaacctct +ccccactatggatgattctaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttgaggcccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgttaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatggactagagatcctgaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggccggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtattcaagaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctagcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccattgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaagctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccactcagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcttttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgtg----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgtcccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttccctaatcaatgctgg---gactggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaggttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggcttcccc------------------ag +cacatctt-----------ctaat------------gcttctactgttactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgcctcgagtttcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatccagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtataa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541348.1/1-7401 |Norovirus Hu/GII-4/Shimane2/2008/JP genomic RNA, nearly complete genome +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------aaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aaa---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggggaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccatcagcctcgccaaggtcgaattgacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcctataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatgggggggattggtttggtgctaggattcaccaaggagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaggatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcacttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaagaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccagggatagggaagacccaccttgctag +ggaagtggccaagaggatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatttggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaacgagctggctggcgccc +tgcaccatctaaggtgcgccagaattaggtattatgttaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgaga---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtagact +acaatgaaaaactcagttttgaggctccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaactcagcaccaaaaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagttaagggtggcccctcgttgcagcaagtcatgagggaccagctaaaaccatttacggagcctaggggt +aagccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtctcttgataagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaaaaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacgcttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggaagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctccgaagtcacaaatttgtctccagacatcatacaggccaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaagggcctcttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgacttcatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttgactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcctctctaaattggaacaattacgacccaacagaagaaatcccagc +ccctctgggaactccagattttgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaatttgcta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcttgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggttattttaggtt +tgactcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttcctttcagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttagactggagcgga +acaaggtactgggcccctgatgctaggactacgacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ctaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tatatctt-----------ccaat------------gcttctactgctgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgc------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agatgttttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541349.1/1-7509 |Norovirus Hu/GII-4/Shimane3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaatgttacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtggtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaattggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgcccttaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacatataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaaacacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttaaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagttcacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggtgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgtgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgccgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctggaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtagtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattaatgtccctactgggagaggccgcactccacggcccaacattctacagtaagatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgctgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctaggaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcccgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtaccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtagcaccatccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccta--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctactgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttctttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactac---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacacatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgttt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541350.1/1-7509 |Norovirus Hu/GII-4/Shimane3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggctattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagtctgatttctacacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaataccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgcataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaacggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtaccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggaactttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttctcttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggagagagaagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541351.1/1-7509 |Norovirus Hu/GII-4/Shimane4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacggcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacttccc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagagttgcagcctccctcacaggagatcagcgtgtaggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +tcaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaaatcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttctcaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggcggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatctctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atcagacgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatttacaacaggcctcctttcaacatgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcgaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541352.1/1-7509 |Norovirus Hu/GII-4/Shimane5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccccccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagagttgcagcctccctcacaggagatcagcgtgtaggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggccccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +tcaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaaatcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttctcaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctataagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgat +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggcggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatctctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaggatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atcagacgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatttacaacaggcctcctttcaacatgataaagagatgctccag +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcgaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +aggagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541353.1/1-7509 |Norovirus Hu/GII-4/Shimane5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaacacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtaga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggctattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctagtgcatcgagcgaaggaggagct +ctccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagatcagcgtgtgggtctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagtgatgtcatcatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttttgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgcataatggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggagaggaacggcaagtactccatagaagagtacctacaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagatttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacgggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgttatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggaggtcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacttgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagatccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttgctgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggttattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtaccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaaccccagatttcgtgggaaagatccaaggagtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctgctcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggcgctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcacaa +atcaggctatgtcacagtggctcacaccggccagcatgatctggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggaactttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaagttgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541354.1/1-7509 |Norovirus Hu/GII-4/Toyama1/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccaccaactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctacgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacattctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacagtcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcacgcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgagagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgcgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaaaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541355.1/1-7509 |Norovirus Hu/GII-4/Toyama2/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------tc----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccc-ccctcgagggaaataccacaa +aga---------------------cctccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacgctcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +aacgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttatcaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacgatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaattcagagcacctccattcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaaaaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaggtac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttccgaaa +ttagaaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttacagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgtgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------actacaca----------------- +----------------atgaacttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctattgagattcgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccgggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttccactgctactt-------------------- +----------ctatct-----attcaaatca------aactgtttcaac----------gag--------gc +ttggctc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcactccgccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttctctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541356.1/1-7509 |Norovirus Hu/GII-4/Toyama2/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaggtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccactccagaactaatc-------aaaaacatccc +ccc-----------------------------tcccccacccaacgg------agaggatgacatagtggtt +tcttatagtg----------ttaa---agatggtgtttctggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccatcagcctcgctagggtcgaactaacaccactctccttgtactg +gagacctgtgtatactcccc---agtacctcatctctccagacgctctcaagaaactacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgttgttgggtcctggacctaaacgactcatggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgcactgtcttcgctattcac +caggcctataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaagggcctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagtctagcaaccta +catgagaacccttgaccttgaggaggagaaagccaggagactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttctagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcctatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcaa +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgctcgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaagcaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggtagcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcgcctccgtgcagaccaacaatgagctggctggcgccc +tacaccatctaaggtgcgccagaataagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaaaacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaaaaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggtaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatttggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtttgttcataacatcaacccatgtcataccccagggggcaaaggagttcttt +ggaacccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgacgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgagaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtaccacacca +ggtgattgtggctgtccctatatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggcaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcttatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaggtcatgagggatcagctgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgctaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctccagtggccatccgcat +catatgcgaaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggct +aacctgatgtttgaagaagggaagaacatgacgccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgagctcaaaacgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcactccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaagttctccc +cagaaccacattt-ggcccaggtagtcgcagaagaccttctctcccctagcgtggtggacgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaagctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagaaaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccccgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaaggcccatacaactgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttt +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtggcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagttccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttaatccccttacctgatgttaggaataatttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattctt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtatgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-gatgtc------cataatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcggctccagctca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctactttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaagaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattttctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggaccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggattcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaacgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agtc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541357.1/1-7512 |Norovirus Hu/GII-4/Toyama3/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccc-ccctcgagggaaataccacaa +aga---------------------cctccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacgcttccttcaagtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcttggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaaaattggaaaaatgtt +gtcatctgctgcatccaccctgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaatcgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggatgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +aacgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttatcaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacgatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaagcaag +cactcaagaatgtctcaatcaagaagtgccagattgtgtatagtggctgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagaattcagagcacctccattcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaaaaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacagatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgtaaggaagaaagagcttctctcggtttagtcacaggttccgaaa +ttagaaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggctggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgtgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcactccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgca----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cagaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcatttctaccaagaggcagctccagcaca +atctgatgtggctctattgagattcgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccgggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatct-----attcaaatca------aactgtttcaac----------gag--------gc +ttggctc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcactccgccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541358.1/1-7509 |Norovirus Hu/GII-4/Toyama3/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggagttggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctggagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccctctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagacgctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaggggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagctgtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgacgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcctcatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaattcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtggctcccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcttacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgccaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541359.1/1-7509 |Norovirus Hu/GII-4/Toyama4/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctacgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaaaccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccgagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcgatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccagtcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgaagtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggtcaatcaattctacacacttgcccctatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541360.1/1-7509 |Norovirus Hu/GII-4/Toyama4/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacgattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +actgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggagttggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctggagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaattggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaccctctcaaccaagtctgcttcacctgatatcgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccctctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttactatcgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagacgctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaaggaaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaggggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaaccgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgacgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaactgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaattcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtggctcccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggcttacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgaatttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------atcttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactgc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagggctaggagttgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541361.1/1-7509 |Norovirus Hu/GII-4/Toyama5/2007/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaagatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatgggatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgaatttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgcaggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagcgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacagggtccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagctgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccgtgcaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcatttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggacttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctgcaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcccaggactct------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgccactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB541362.1/1-7509 |Norovirus Hu/GII-4/Toyama5/2008/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgctttcgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacag +aaa---------------------cccccacgaccacctactccggaactggtc-------aagaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtggtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacagcc +agaagaaaccaatacggccttcagtgtacctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcttgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaacactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattgcatggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgatcgcccccttactcggtgattttgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagc +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatctatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagataaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcaccctaaattgtgacaggatcgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcggaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgatcgtaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcaactcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaaatgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttgtggt +ctaagccacaagtggaaaacacagagga--------gactaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggagaagaaacccagaagacttcaagcccaaggggaaactatgggctgatgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcttgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gcccgtggtggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagtgccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agagtcaagggtggcccctcgttacagcaagtcatgagagaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggttcagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctcct +cggaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattctatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggagtatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattttacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgtccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttggagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttaccatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcartcaaatgat---tccaccatcaaattgatagcaatgttgtatacaccacttagggccaacaatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtaccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagctgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaacggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttacagg------------------------------------------------ta---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcttctcaaaattggaacagttatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggraagattcaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgaytttgctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtgataccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttaytcaggtaga-aatagt------cacaatgtgcacctagcccccgctgtagcccccacttttccgggtg +agcaacttctcttcttcagatccactatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggattgtctgctcccccaggaatgggtgcagtatttctatcaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaaacttcataa +atcaggctatgttacagtggctcacaccggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaatcagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctccggactt +ggttctctgatcaatgccgg---ggctggggccatcaaccaaaaagttgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccacttttccacccct--------- +ca---------------------atcctcgggggcact---------------------------------g +ccaggaa----------------gagctaatcttagggctgc------------------------------ +------------------------------tgcccctgctcgaggctcctcc------------------ag +cacatctt-----------ctaac------------gcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaatacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>GU980585.1/1-7577 |Norovirus Hu/GII.3/CBNU1/2006/KOR, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------gacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcataaacagcct-cccccgagggaaataccacaa +agg---------------------cctccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttctggtttgcctgagcttaccactgtctggcagcc +ggatgaaaccaatacggcgttcagtgttcccccactcaaccagagggagaacagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgaactagcaccactctctctgttttg +gaggccagtgtacacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgttgttgggttctggacctaaacgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaattgaagaaggtagccaacatattcttgtgtgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcttggcaaccta +catgagaactcttgacctcgaggaggagaaggccaggaagctttcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgttccctggtgcatcgggcgaaagaggaact +ctctagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgccag +ggagctagccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgatcactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgcccccttacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcatttagttctgacttctcgcacataaaactgg +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgttatgaaaaccctca +ccactggttccctcatcgcccgagcatcagggttactccatgagaggttagatgagtatgagctgcagggcc +caacccccaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acggattgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cactcaagaatgtcgcaatcaagagttgtcagatagtgtatggtggctgcacttataggcttgagtctgacg +gcaagggtgatgtgaaagttgacagagttcagaacgccactgtacagactaacaatgaacttgccggcgccc +tacatcatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagatctctggt +ccaagccacaggtggaggatacagagga--------gaccgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaatggcaaatactccatagaggaatacctccaggacagggacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaga +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcagctttggttcaggttggg +gcttttgggtttccc-ccagcctgttcataacatcaacccatgtcataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaagccgatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcatcaag +aggccaactggagaactcatgcccctggcagccagaatgggaacccatgcaaccatgaggattcaagggcgc +actgttggaggtcaaatgggcatgcttctaacaggatccaacgctaagagtatggacctgggcaccacacca +ggtgactgtggttgtccctacatttacaagagggggaatgactacgtagtcattggagtccacacagctgcc +gcccgtggaggaaacaccgtcatttgtgccacccaggggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccaaagctcagcaccaagactaaa +ttctggaggtcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccctcattgcaacaagttatgagggaccaactgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcgtttgcgcaggcatgcgcatcccttgacaagaccacttccagcggtcacccgcac +catatgcggaaaaacgactgctggaacggggaatcctttacaggaaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgaccccagtctacacgggtgcgctcaaggacgagctggtcaag +actgacaagatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgattcggtgc +gctcgagcattcggaggcctgatggaggaactcaaagcacattgcgtcacactacctgtcagagtgggcatg +aatatgaatgaggatggtcctatcatctttgagagacactccagatataaataccattatgatgctgattac +t-cccggtgggactcgacacaacaaagagccgtgttagcagcagccttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaattaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaggttacaaacctgtcccctgacattattcaggctaactctctcttt +tctttctacggtgatgatgaaattgtgagtacagacataaaattggacccagaaaaactgacagcaaaactc +aaggaatacgggttgaaaccgacccgccctgacaagactgaaggaccccttgtcatctctgaagacctgaat +ggcctaaccttcctgcggaggaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agtaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgaggttctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccactccatctaa---tgatggtgccgccggcctcgtcccagagatcagtaatga +ggcaatggcgctagatccagtggcgggtgcagcgatagcagcgcccctcactggtcagcaaaatataattga +tccctggattatgaataattttgtgcaagcacctggtggtgagtttacagtatcccctaggaattcccctgg +tgaagtgcttctcaatttggaattgggcccagaaataaatccctatttggcccatcttgctagaatgtataa +tggttatgcaggtgggtttgaagtgcaggtagtcctagctggaaatgcgtttacagc---aggaaagataat +ctttgcagctataccccctaatttcccaattgataatctaagcgcagcacagatcacaatgtgcccacatgt +gattgtggatgtcagacagttggaaccggtcaaccttccgatgcctgacgttcgcaataacttcttccacta +caaccaagggtctgat---tcgagattgcgcttagttgcaatgctgtatacacctcttagggcaaataattc +tggggatgatgtttttactgtgtcttgtagggtgctgactaggcctagccctgacttttcatttaatttcct +tgtgccacctactgtggagtcaaagacaaaacccttcaccctccctattctgactatctctgaaatgtccaa +ttctagg---tttccagtgccgattgattctctgcacaccagcccaactgaaaatgttgttgtccagtgcca +aaatggacgcgtcactcttgatggtgagttgatgggcaccacccaactcttacctagtcaaatctgtgcttt +taggg-----------------------------------------gcgtgctcaccagat----------- +-----------caacaagcagg------gccagtgaccaggccgacacagcaacccctaggttgttta---- +-------attatt----------------------------------attggcac----------------- +----------------atacaattggataatctaaatgggactccttatgatcctgcagaagacataccagg +ccccctagggacaccagatttccggggcaaagtctttggcgtggccagccaga---gaaa------------ +-----tc------------ccgacagcacaact--------aga-----------gcacatgaagcaaagat +agacacaacagctggtcgttttaccccaaaactaggctcattagagatatcc------------actgaatc +tggtgactt---tgatcaaaaccaaccaacaa---------------------------gattcaccccag- +--------ttggcattggggttgacca------------cgaggcagatttccaacaatggtctttacccga +ctattctggtcag-ttcacc------cacaacatgaacttagccccagctgttgctcccaacttccctggtg +agcagctccttttcttccgctcacagttaccat------cttctggtgggcga-----tcca---------- +--acgggattctagactgcctggtcccccaagaatgggttcagcacttctaccaagaatcggcccccgccca +aactcaagtggccctggttaggtatgtcaaccctgacactggtagagtgttgtttgaggccaagctgcacaa +attgggtttcatgactatagctaagaatggtgactctccaataactgtccccccaaatggatactttaggtt +tgaatcttgggtgaacccattttatacacttgcccccatgggaactgggaatgggcgtaga---------ag +gattc---------aataatggctggagcttttatagcaggattagctggtgatatgttcacaaacactgta +ggatctctagttaatgcagg---ggctaatgccattaatcaaaaagttgattttgaaaacaataaatat--- +------------------------------ttgcaaaatgcttcctttaatcatgataaggaaatgttaaat +gcacaaattgaggcaacaaagaggttacaggctgacatgattgctatcaaacaaggggttttgaccgctggc +ggcttttctcctactgatgcagcccgcggggcaattaatgcccccatgacaaaagtcctagattggaatgga +acgaggtactgggcaccaaatgccacctctacaacctcgatgtcgggtggcttcaca-aacca--------- +gg-------------ctgtgcacagaaccacgccaaat---------------------------------t +ttaaaac----------------gaaccaggcccccaaatccacacccagcagtgggtcttcagtgaggtca +cactcaacccaaatcac--taatctgagctcacactcgtccgggtcgtctcgatcca--------------g +cgggtcta--------------------------------cagttgttagctcattac-------------- +----------c------------------------------------------------------------- +---------------------------------------------------at------------------c +ctctaa---------------------------------------caggactagggactgggtcaaccaaca +aaattttaatttggaaccacacatgc---ctggatcccttaggacagcttttgttactccaccatctagtac +agcctct---agtt------------------------------caggca---ctgtctcaaccgtgcccaa +aaatgttttgga-ctcctggacatctgcgt------------tcaatacgcgcagacagccgctattcgcac +accttcgtagaaggggggagtcaaa--------tgtttag--t-----------gaaaagatta-------- +-------ctt-taa--------------------attt-g--------gt-ttaa-attggatttga-tta- +--------------gga---atcttttaaaaaaa-------------aaaaaaaaaaaaaaaaaaaaaaa-- +------------------------------------------------------------------------ +- +>GU991353.1/1-7555 |Norovirus Hu/GII/Shanghai/SH2/2008/CHN, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggtgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctccactcggtcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +aag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaacttgctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ctctagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcattgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaatacagagga--------ggccaccagcaaggacgggtgcccaaaacccaaa-- +-gac----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggtaagtactccatagaagagtaccttcaggatagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagtgttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgtttataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagagctcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +ggtaagggaacatactgtggcgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagttatgagggaccagctaaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaatgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagggttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tctttctatggtgatgatgaaattgttagtacagatataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcaaagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacaaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggccccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggtgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aatttaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccactttcccgggtg +aacaacttcttttctttaggtctactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttagtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaacgcgggccgtttttccacccct--------- +ca---------------------accttcgggggtact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaacttgtcacctttcatga---ggggggctcacaacatatcgtttgtcacccctccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtcc------------------------------------------------ +------------------------------------------------------------------------ +- +>GU445325.2/1-7559 |Norovirus Hu/GII.4/New Orleans1805/2009/USA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcactttcaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaaaaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccacccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggacggggaaatctaccattatggcctgtatgtggagcgaggtcttgt +attaggtgtgcataaaccaccagctgccatcagcctcgctaaggttgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattatccggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +tcccactatggatgactccaaaataaagaaggtagctaacatattcctgtgtgctctgtcctcgctgttcac +cagacccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttacttggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaggcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacccgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgccgcacgttctctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcaggccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgaaaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgctttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacagcttgctgctgaaaataaat +atgggttgatagacacaatgagagttgggaaacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgccgccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatactacgtcaagtgtgtccaggaggccctgtattccatcattc +aaattgctggggctgcatttgtcaccacgcgcattaccaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgcccaaaacctaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +aaactggccgcggcaagaagcacacagcattttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcctctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacaggagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcgaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgcccctatatctacaagagaggcaatgactatgtggtcattggagtccacacggctgcc +gcacgtgggggaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagccaaggggc +aagccaccaaaaccaagtgtattagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctggaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgtacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacctatcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agagaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacctgaat +ggcctaactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggtcccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagtaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgtagttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---tccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +cggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgaatcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagttgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttccagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatttggcctcccaaaattggaacagttacgatccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacaaatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgaaactaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtagtactaccccccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggcaga-aacatt------cataatgtgcacctggcccccgctgtagcccccactttcccgggcg +agcagctcctcttcttcagatctactatgcccg------gatgcagcgggta------cccca--------- +--acatggacttggactgtctgctcccccaggaatgggtgcagtacttctaccaggaggcagccccagcaca +atctgatgtggctctgttaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctctgagacagatgcagcccgtggagcaatcaacgcccccatgacaaaaactttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------a +ccaggaa----------------gagccaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +cacgtctt-----------ctaac------------tcttctattgctactt-------------------- +----------ctgtga-----attcaaatca------aaccacctcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcaccttttatga---ggggggcccacaacatctcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttc- +-------a-------gt---gtctttc--------------------------------------------- +------------------------------------------------------------------------ +- +>AB543808.1/1-7509 |Norovirus Hu/GII-4/FUMI/2010/JP genomic RNA, complete genome +--------atgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgaccccgcaaaatcttcaagtgacg---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttacagtg----------ccaa---agatggcgtttccggtttacctgagctctccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---caggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtggctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaagacccctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgacttcgagttacaaggacctgaggaccttgtggtgga +gctcgttcctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaagaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccacatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacattgt +aggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccttggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +agggaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaactgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggatacaatgaaaattgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggtcgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagagttcagagcacttccattcagaccagcaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcgtttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---aattcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagggcttctctcggtttagtcacaggtactgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaggggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgttgtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatttgcgccacccaagggggtgagggggaagctacacttgaaggtggtggc +agtaagggaacatactgtggtgcaccaattctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggatccc +agggtcaaggatggcccctcgttgcagcaagtcatgagagaccagctgaaaccatttacagagcctaggggc +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcgcaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacgggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaggggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggtcccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtagcagaagacctcctttctcctagcgtggtggatgtgggtgacttc +acaatatcaattaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattaggaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgacctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ctcaaga---ttccccattcctttggagaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacaactgatggcgtgctcttaggcaccacccagctgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgcccccttcactccaaagctgggcagtgtccaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaacctcaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactaccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacgcttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcagtgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaactgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggttttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------acctccaggggcact---------------------------------g +ccaggaa----------------gagtcaatcccaggactcc------------------------------ +------------------------------cacccccgttcggggctccccc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>GU292831.4/1-7577 |Norovirus GII strain Hu/GII.P16-GII.16/RUS/Novosibirsk/Nsk-410/2005, complete genome +----gtgaatgaagat---ggcgtctaac-gacgctaccgttgccgttgcttgc------------gacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gcttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggcccggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccacctacgcccgagttggtt-------aagagaatacc +ccc-----------------------------tcctccacccaatggc------gaagaagaaccagccgtt +aggtttgagg----------ttaa---gagtggaatctctggtctgcctgagctcacgacagttccccaact +ggatgtgaccaacacggcattcagtgtcccaccgctgagcttgagagaaaacaaggaggccaaggaaccgct +gactggggcaatattagagatgtgggatggagagatataccactatggtttgtatgtggagaaaggcttagt +gttgggtgtgcacaaaccacctgcagctataagtatggcaagggtggaaatgacgccgctgtcattatattg +gcgtgtggtgtacacccccc---aatacctcatttcccccgacactctcaagaggcttaacggggaggcatt +cccttacactgcctttgacaacaactgttatgccttttgttgctgggtgttagaccttaatgactcatggct +cag---cagaaggatggtgcaaagaacaacaggcttcttcagaccctaccaagagtggaacagaaaacccct +acccactatggatgactcaaaaattaagaaggtggcaaacattttcttatgttcattgtccacactgttcac +cagacctataaaagacatcatagggaaaatcaaaccactgaatattttgaacattctggcaacgtgtgactg +gacgttcgccggaatcgtagagtctctaatactacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgctatgatcgcccccttacttggcgaatacgagctacaagggcccgaagacatcgccgttga +gctcgtacctgtagtaatgggagggattggcttggtgctaggattcaccaaagagaaaattggcaaaatgct +atcctcagcagcatcaacgctcagggcttgcaaagaccttggtgcttatggtttagagatactcaaattggt +tatgaaatggtttttcccaaagaaagaagaggccagtgaactagccatggtgagggcaatagaggatgctgt +actggatcttgaagcgatagaaaacaaccacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaagacactggacctagaggaagaaaaagccaggagattgtccacaaaatctgcatcccctgacatagt +tggaacaatcaatgccctgctggctcgaatagcagcggctagatcactagtccacagggccaaagaggaact +gtctagcaggatcaggccagttgttgttatgatttctggcaagccagggataggcaagactcacctagccag +ggaggtggcgaaaaaggtggcatccactctcacgggggatcaaagagtcggactcataccgagaaacggtgt +agaccattgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagtaaccccatcca +tgatgctctgcgcatacaggaattggccgacacatgtcccctcaccttaaattgtgacagaattgaaaataa +gggaaaagtttttgatagtgaagtcataataatcacaacaaacctcgccaatccagctccccttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtatacgccgaagcaccagaagtggaaaaggcaa +aacgagacttccctggtcagccagatatgtggaaggacgccttcaaagcggacttttcgcatatcaagttac +aacttgcgcctcagggcggttttgacaagaacggcaacaccccacatggtaaaggagtgatgaagaccctca +ccactggttctctgattgcccgtgcgtcaggtttactacatgagaggatggatgaatttgaactccagggcc +ctacaaccaccactttcaatttcgaccgaaacagaatcaccgcctttagacaactggctgcagaaaacaagt +atgggttggtggacaccatgagagttggcaaccaactgaaaggggtgaaaaccatggaagaactcaagcaag +caatcaagaatgtgtccatcaagaggtgccagattatctataatggctccacgttcgaccttgagtctgatg +gtaagggcaaggttttagtggaaaaggttaaaaacacctccgtccagaccaacaacgagctggccggagccc +tgcatcacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaagcagtctactccatcctac +aaattgccggcgctgcgttcgtcaccacacgtattgcacgccgtatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------gccagagaccaaagaagaggcccccaagttagaa-- +-gat-------gatg---agttcattatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +agactggccgtggcaagaaacacactgcattctcgagcaagggcttgagcgatgaggagtatgacgagtaca +agagaataagagaagagagaaatggaaagtactctatagaggagtatctccaagacagagacaggtac---t +atgaggagctcgccatcgccaaggccacggaagaagacttctgcgaggaagaagaaattaaaatccgccaga +ggatcttccgccctaccagaaaacaaaggaaggaagaaagggccacgctaggactagtgactggttcagaaa +tcagaaagagaaaccctgatgacttcaaacctaaagggaggttgtgggccgacgacaacagaagtgttgact +acaatgaaaagttggactttgaggcccccccaagcatatggtccaggattgtgagctttggttccggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagtccaagtccacaaatcaggtgagttttgccggttcagattcccaaaaccaatt +agaccagatgtgacaggaatgatcctggaagagggtgcgccagagggcactgtggcaaccgtactaatcaaa +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcgaccatgagaattcagggccgc +atggttggcgggcagatgggcatgttgctcactggttcaaatgctaagggtatggatttgggaacaactccc +ggtgactgtggctgcccgtacatctacaaaaggggcaatgactatatagtcattggagtgcacacagcagca +gcccgtggtggaaatactgtcatctgcgccacacagggaagtgagggtgaagcgactctcgagggtggagac +gacaaaggaacatactgcggggcacccattctgggccctggaggagcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgcccctcccaccagggacgtatgagcctgcctatcttggtggtcgtgacccg +cgtgtaaagggcggaccctctttgcagcaagtcatgagagatcagttgaagcccttcactgagcccaggggt +aaacctccaagacctagtgtgttggaggcagctaaacaaaccatcatcaacgtccttgagcaaactctggat +cccccacaaaagtggacatacgcacaggcgtgtgcttcgcttgataagaccacctctagtgggcacccccat +cacgcccgaaagaatgaattctggaatggtgagacctttattggcaagttggcagaccaagcatcaaaagca +aacctgatgtatgaggaagggaaacacatgacaccagtgtacacagcagccctcaaggacgagttggtaaaa +actgacaaaatctatgggaagatcaagaagaggctgctttggggctctgacttgtccaccatggtccgatgt +gctagggcctttggtgggctcatggatgagatgaaggcacactgcatatcactcccagtccgagtcggtatg +aacatgaatgaggatggtccaataatatttgagaagcattccagatataagtaccattatgatgcagactac +t-cccgctgggattcaacacaacaaagggctgttctagcagcggctttggaaataatgg-tcagattctctg +cagaaccacaact-ggcacaaacagtcgctgaagacctgctggcccctagtgtggtagatgtaggagacttc +aaaatttcaataaatgaggggcttccttctggtgtaccatgcacttcccagtggaactccatcacacattgg +ctgttaactctctgtgctttgtctgaagtcaccaacctgtcccctgacatcgtgcaggcaaattccatgttc +tcgttttacggtgatgacgagattgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agggaatatggtctgaaaccaacccgcccagataaaactgagggaccactgattatcagcgaggatttggac +ggactcaccttcctccggaggacagtttcccgtgacccagctggctggtttggaaagttagatcaaagctca +atactaaggcagatgtactggaccagaggaccaaaccatgaagaccccaatgaaacaatgataccccactct +caaagacccatacagcttatggcactgcttggtgaggcttcccttcatggaccctctttctacagcaaaatt +agtaaattggtcataactgaactcaaagaaggtgggatggatttttacgtgccgaggcaggaacctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcacttgaaccagttgcgggagcttcaattgctgcccctttaactggtcaaaataatgtaataga +cccctggattagattaaattttgtacaagcccccaatggtgagttcacggtttccccccgaaactcgcctgg +tgaagttttgttaaatttggagttagggcctgaattgaatccatacttagcccatttagcaagaatgtataa +tggttatgcaggtggggttgaggtgcaggtactgctggctggaaatgcgtttacagc---aggcaaactggt +atttgcagcaatcccccctcattttccagtagataatttgagccctggtcagattactatgttcccccatgt +gattattgatgttagaacacttgagcctgtcttattaccattacctgatgttaggaataatttctttcatta +taatcagcagagtgat---cagcgcatgaggcttattgctatgctttataccccccttagatctaatggttc +aggtgatgatgtctttactgtttcatgtagggtcctaaccaggccatcccctgactttgattttaattattt +ggttcctccaacagttgaatctaaaactaaacccttctcagtcccagtgctgacccttaatgaactgaccaa +ttctcga---tttcctgtcccgattgatgccatgtacactagccctaatgattcaattgtggtccaacccca +aaatggaagggcaaccatagacggtgagttgcttggcaccacccaactcatccccagtggtatctgctcatt +tagag-----------------------------------------ggaaaatcacaacac----------- +-----------acttgtc------------------------------------------------ag---- +-------atgaca----------------------------------ggcac-------------------- +-------ttgtggaacatccaagtctccaatttgaatggcactccgtttgacccaacagacgacgtgcccgc +accattgggtatgccagacttttctggacaaatatttggggtagttagtcaaa---gggacacag------- +----------------gcaccaaccccgcaaac--------aga-----------gctcatgacgctgttct +tgcaacctacagcgccaaatacactcccaagctcggttcagtccaaattggaa---------catgggacac +cgaggattt---gcttgaaagacagcctgtca---------------------------aattcacgcccgt +tggtctcaatgaaatt---------ggacaagacaagcat---------tttgaccaatgggtgttaccaaa +ttattctggtgcc-ttagga------ctcaacatgcacctggctcctgctgtgtccccactctttcctggag +agagattattgttctttagatcatatatacct------ctaaagggtggcca------tgggg--------- +--acccattcattgattgtctagtgccacaagaatggatacaacacttttatcaagaatcagccccagcaca +atcctcggtggctctactgaggtatgtgaatccagacacaggtcgcactctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagtacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgactcttgggttaaccaattctactcacttgcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagctttcatagcaggacttgctggtgacattgtcactaatggcatt +ggttcgcttgtgaacgctgg---agccaatgccataaaccaaaaagttgattttgaaaataacaaacagcta +caacaag---------------------------------cttcttttaatcatgacaaagagatgctgcaa +gcccaaatccaagccaccaaacagctacaggctgacatgatttcaatcagacaaggggttttgtccgcgggc +ggcttttcccctactgatgctgcaaggggcgcagtcaacgcaccaatgacccaagtgttggactggaatggg +actagacattgggcccctggagccccaagaactaccagtttctctggtgggttcaccaactcc--------- +ac---------------------ccgtgccagaacagttgagccacccaaaagttccccccctgttcaaaat +accttga----------------tctctgcttctagac--------------ctag---------------- +------------------------------ctctactgtctcatcttcttcc------------------ac +ccgttcga-----------ctgtg------------gtcactagttcctctactgccc-------------- +----catctgttagat-----cttctgtaac------tagaaattcacc-----------ac--------gc +-------------------agtgcttctcaatctgtttctt---------ctg------------------c +ttcttc---------------------------------------tcgcactggtgattgggtacaaaatca +aaatagaatgctggagccatacctga---gggggtcgttgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---agta------------------------------atggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------ttaacacccgcagacagccgctcttcgctc +acctccgtcggaggggggagtcaca--------agcttag--t-----------gaaaagaatc-------- +---a-g-att-ttct-----tt------------ttctttc----------tt-------------ttc-tt +c-gttgaaaatc-ttat---gtcttttaaaaaaa-------------aaaaaaaaaaaaaa----------- +------------------------------------------------------------------------ +- +>GU325839.2/1-7560 |Norovirus Hu/GII.4/HS194/2009/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaaatgaca---------------aaatgttttctaacat +ggctgtcactcttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------agaggatgaagcagtgatt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtacacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatttctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaatatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatgggggggattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttccccaagaaagaggaagcgaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgttctctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcaggccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcattccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgcgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgacaagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcgtcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggacgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagtacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggccgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaagaaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggctaccgaggaagacttctgtgaagaggaggaggccaagatccggcaga +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaagctcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctattcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +agacccactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaacgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaagacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacagacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccacccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttagcaaccatgatccggtgt +gctcgagcattcggaggtctgatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacactt-agctcaggtagtagcagaagaccttctttctcctagcgtggtagatgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggaccccttgttatttctgaagacttagac +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaatcatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccccgatctgaatccctacctatcacatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcctgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tccaccattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaagccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcggg------------------------------------------------tt---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcatctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaga------------------- +-----ca-----acaaagggagatggctcgacc--------cgg-----------ggccataaagctacagt +ttacactgggagtgccgactttactccaaagctgggcagtgttcaatttggta---------ctgatacaga +aaatgactt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggcaga-aatgtc------cataatgtgcacttagcccctgctgtagcccccaattttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctatcaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagagtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccaacatgatttggtcatcccccccaatggctattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttctttccagtttaacagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcagcaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctagaattacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +catatctt-----------ccaat------------gcttctactgctactt-------------------- +----------ctatat-----actcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaagcagcctctcttcgctc +acatccgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GU017903.2/1-7529 |Norovirus Hu/GII.14/8533/Maizuru/2008/JPN, complete genome +----gtgaatgaagat---ggcgtctaac-cgcgctccgcatgcctttggcagtcaa---aactctgtcaat +g------ac----agtatcaacgccaccccttccaataaggaagaggt------tggtgcattttccaacat +caaagttggatttaagaaaa----tgctgggtgctgtacccaagggcact-------------aaagcaccc +agcagtgg----------------tcaacattgtcccacagttaagatcgggcccaaaacattaacaattcc +ccc-----------------------------tgagcccccaaatgg------tgaagac------actgtg +cagtttgatg----------caaagtcggaaactataattgggctgccggacttgacaacggt---gcaaaa +cgaacatgaaaacaccccatacaccgtccccccattaagtgagagggagcacagatcggccactgaaccact +tcctggcacaatattggagatgtgggatggtgaattttaccactactccgtgtatgtcagcgatggcaaagc +tctgggggtccacaaaccaccggctgctataagcctcgcgacgatagagctcacccccatatctctctactg +gagacccgtttacaccccca---actatttggtctccccagacacattgaaaggcctcgctggtgagaagtt +cccctacacggcctttagtaacaattgttataacttttgttgttgggtgcttgagctcaacgacacgtggct +caa---cagaagatgcatttccagaaccaccggcttcttcaaaccttatcagtcttggaacaggaagcccct +cccaaccgttgatgatggaaagatcaaaagggtggccaacgcgatcctctgtgcactcggctcgctgttctc +aaagccaatcaaagatttgttaggcaaacttaagccattgaacctgctacacttgcttgcgtcatgcgattg +gacgtttgcaggtatagtggagacagtcatcttaatggcagaacttttc---aatatcttctggaccccgcc +agatgtctctaattttatagcctccctgataggtgattttgaattacaagggcctgaggacctggctgtgga +actcgttcctgtggttatgggtggcataggaatggttctcggcttcaccgctgagaagataggccgtatgct +gtcatccgccgcatcaacactgcgggcatgcaaagacctagggaactatgcccttgacattctcaaattggt +catgaagtggttcttcccaaagaaggaagagaaagctgagatggaaaccttgagggcgatcgaggatgccgt +actagatatggaagctatagggaataaccatctcacgaccctcctcaaggacaaagacagcctcacggcttt +tatgaagaccctggacctggaagaggaaaaagcaagaaaactgtccactaagtcatcttcaccggacatcgt +cggcaccattaatgccatactagctaggattgctgctgccagatcccttctacataaggccaaagaagagat +gtttagtaggatcagaccagtggtcgttatgatatcaggcagacctggcattggcaaaacccacatggcaag +acatttggctaagagcatcgccaacaccatgagtggcgaccagagagtcgggctcgtcccacgcaacggtgt +cgaccactgggatgcctacagaggagagagggtggtcttgtgggacgactacggtatggggagccctgttaa +agatgccttaacactacaggagttggccgacacctgtccagtcactttaaattgtgataggattgagaacaa +ggggaagatgttcgacagtgatgtcatcataatcacaaccaacctggtcaaccccgcgcccctcgattatgt +gaacttcgaggcgtg-ttccaggagagttgacttcttggtctatgcagagtcaccagagattgaaaaggtca +agagggacttccctggccaacctgacatgtggaaagaccattttaagccagacttttctcacatcaagctaa +ctctagccccccagggcgggtttgacaagaatggtaacactccacacggtaagggaaccatgcggtccctga +cccaggggtccctgactgcaagagttgcgggccttgtccatgagaggagagatgagttccaactccaaggaa +acgacctccaaacatacaattttgacaccaacagagtctccgcattcagaaaactggctgcagataacaagt +atggtatcatggaaacgatgagagtaggtgcggcactcaaaaatgtaaagaccttggaagatctaaaatttg +cattaagggatgtgaaattcaatgagtgtgaaataatttacaagaactctaagtatcgagtctcttccaacg +gtaaaggctcagtttctgttgacaaaattgaggacaatgcatcccagaccgcaaacgaggtacaatcagcac +ttctcaggctcagacaagcgagggccagatattacatcagctgcttccaagacctcgtctacactctcatac +aggttgccggagcatcattcgttgtca---------------acagaa------tttccaaaaggttctgct +gggaaaggtgggtcaaaccaaccgagac-------------ccaggatgtgaatgagtccga-----gaagg +aagtggctcaaggta---gatgggaaattgagcccaaggacacagaaccagaaggcaagaagggtaaaaaca +agaaaggaaggggcaagaaacacacagctttctctagcaaaggcctgagtgatgaagagtatgacgagttca +agagaatcagggaagaaaggaatggaaagtactccattgaggaatacctgcaagaccgggaccgctat---t +atgaagaagtggcggttgcccgggcaacagaggaggacttctgtgaagaggaagaggccaaaataagacaaa +gaattttccgcccgacaaagaaacaaaggaaggaggaaaggggtgtacttggcttagtcaccggcacagaca +tcagaaagaggagaccagacgattttcaaccaaaaggcaatctgtgggcagatgacaccaggagtgtggact +acaatgagagacttgattttgaagcgcccccaagtgtctggtcaagaatagtcccattaggcactggttggg +gtttctgggtttcat-ccaaccttctaatcacaacaacacacgtcctgcctaaaggggttaaggaactcttt +ggagttgaaatcaaacagatccaagttcacaagtctggagagttttgcaggtttagattcccaagaccaatc +aggccagatgtcacagggctcgtgttggaggaaggcgccccagaaggcactgtctgttctatactcataaag +agacctacaggtgagatgatccccttggcagtgaggatgggcacacacgcatccatgaaaatacaaggcagg +accgttggtggccagatgggaatgcttctaacaggagcaaatgcgaagaacatggatcttggcaccggccct +ggtgactgcggttgtccctacatctacaaacgcggcaacgacatagttgtcgcgggtgtccacaccgcagca +gcccggggaggtaacactgtcatatgtgccactcaagggcaagatggggaagcagtccttgagggaaatgag +gacctcggtacctactgtggcgccccaattctgggccctggtaaggcacctaaactcagcacgaagaccaag +ttttggcgctcatcaccagatgccttgccacctggcacatatgaacctgcttacctgggaggcaaagacccc +agagtggaaagaggaccttccctgcagcaagtcatgagagaccagttgagacccttcacagaacccagggga +aaaccgcctagacctgcagtcttagaagaagccaagaagacagtgatgaatgttttagaacaaaccattgac +cctgcaaaaccgtggtcctactcgcaagcatgtgcctcactggacaaaaccacttctagtggtagcccccat +catgtaaagaaaaatgaccactggaatggggagtccttcactggtccccttgcagatcaggcatccaaagcc +aacctcatgtatgaacaggctaaacatgtgcagcccgtgtacacggccgcgctcaaagatgagcttgttaag +actgacaagatctacaaaaagataaagaagaggctcctatggggatcggaccttggaacaatgatcaggtgc +gccagggcttttggtggtctcatggacagcatgaaggcaagctgtatagctcttccatgcagggtaggaatg +aacatgaatgaagatggccctatcatatttgacaaacattctaagtataggtaccactatgatgctgactat +t-ctaggtgggactcaacccagcaaaggagcattctttctgccgctatggaagtgatgg-tgcgattttctg +ctgaaccagaatt-ggcacaagtggttgcagaggaccttttggcgcctagtcagcttgatgttggtgatttt +atcatctcagttcaggagggcctgccatcaggagtcccatgtacatcacaatggaactcaatagcacactgg +atcctaactttgagtgcgatggcagaagtgtcaggtctctcaccagatgttgtccaagctcactcctgcttt +tcattttatggggacgatgagatcgtcagcactgacatcaaccttgaccccatgaagttgacacagaaactc +agggagtacggcctggtccccacccgacctgataaaactgaaggtcccctcgtcataactgaagacctcacc +ggcctgacgttccttcgtaggtcgattgcacgggacccagctggatggtttggaaaattggaccaagattca +atcctcaggcaactatactggacaagggggcctaaccatgagaacccgtacgagagcatggtccctcattcc +cagcgggccacacagcttatggctcttcttggtgaggcttcactgcatggtccccaattttacaagaaagtc +agcaaaatggttattaatgagattaagagtggtggtctggaattttatgtgcccagacaggaggccatgttc +aggtggatgagattctctgacctcagcacatgggagggcgatcgcaatcttgctcccgaaggtgtgaatgaa +gatggcgtcgaatgacgctactccatctga---tgatggtgcagccggcctcgtaccagagatcaacagtga +ggttatggctcttgaacccgtcgctggggcctcccttgcagcccccgtagtcggccaacagaatataattga +tccctggattagaaataattttgtacaagcccctgctggtgaattcacagtttcccctagaaactctcctgg +agaacttctacttgatttggaattgggtcctgaacttaatccctatcttgcacatttggccaggatgtacaa +tgggcatgcaggaggaatggaagtgcagatagtactggctgggaatgcgttcacagc---tggtaagatcct +atttgctgccatcccgcctagcttcccctatgaaaatttgtcacccgctcaattgactatgagcccccatgt +gatagtggatgtgaggcaattaaaaccagtgcttctgccaatgccagatataaaaaatgatttcaaccacta +taaccagaaaaataat---accaaacttaggcttgtagctatgctttatacccctctgagggctaacaactc +aggtgatgacgtgtgcacggagtcttgccgcgttttaacacgtccttctccagatttccagttcacctttct +ggtcccacctacagttgagtctaaaactaagaatttcacccttcccgttcttagagtctcagagatgacaaa +ctcaagg---ttccccgttgttttagaccaaatgtatacaagcaggaatgaaaacatcattgtccaacccca +aaacggcaggtgcacgactgacggtgagctgcttggcactaccatcttgcagtctgtgtctatttgcaactt +taaag-----------------------------------------gaacaatgcaggcaaagc-------- +---------tgaatgaagaacc-----------------------------------acga----------- +------------------------------------------------------------------------ +----------taccaactacaactcaccaacttggatgggtcacccatagatccaacagatgatatgcctgc +ccctcttggcacaccagacttccaggccatgttatatggcgttgcaagccaac---gctcttccat------ +---------------aga-----caatgccacc--------agg-----------gcacatgatgcacagat +tgacactgcgggtgacacattcgccccgaaaattggccaggttcgttt---ta---------aatcaagctc +taatgattt---tgacctacatgaccctacaa---------------------------aattcacaccta- +--------ttggtgtcaatgtgg---atgatc---------agcacccttttagacagtggtccctgccaaa +ctatggtggtcac-cttgcc------ctgaacaaccatttagcccccgctgtgacaccactctttcctggcg +agcagattttgttcttcaggtcatacattccga------gcgccggaggcca------cacag--------- +--acggtgctatggactgcttgctgccccaagagtgggtagagcacttctaccaggaagcggctccttccca +atctgacattgcactggtaaggttcatcaaccctgatacaggaagagtgctctttgaagctaaattgcataa +acaaggtttcctcacaattgcagcatctggagatcaccctattgtgatgcccactaatggttactttaggtt +tgaagcttgggttaaccctttctacactctcgcccccgtgggaactgggtctgggcgcagg---------ag +gattc---------aataatggctggagctttccttgcaggcttggcaggtgacgttgtgacttccagcttg +ggctcacttgtgggcgctgg---agccaacgccatcaaccagaaagtggagtatgacttcaacagacag--- +------------------------------ctccaggaggcatcttttagacatgataaggatatgctcaaa +gcccaggttgcagcaacagcaggccttcaacaggccatgatagacatcaagcgggaggcattgaccgcaggc +ggcttttcccccgctgatgctgcaaggggtgcagttagagcgcctatgacacagattcttgactggaatggt +tctaggtattgggcccctaactccatgaagacaactggctattcaggtacatttgcttcccaaggcatta-a +aa-----------gttccccccacctgtc-------------ta---------------------------a +tcaaattc--------------caagtgttgttaaatc---------------------------------- +-------------------------------------taccaaacctttaccatctat-----------atc +tagttcct-----------ctagtgtatatagttctccttctactgccccttcac----------------- +---------------------aatcaacaca---atcaacaacgctgtctg-------cagg--------aa +cagggtc----c---tccag-------------------atctaacaccgtgt---------ccacaaagac +ctctac-------------------act--------------gtcgaggacaagtgactgggttagaggtca +aaatgagatgcttggcccgttcatga---gtggtgcactccaaactgcttatgtcacaccaccatcgagcag +ggcctca---tcac------------------------------aaggga---cggtctcgaccgtacccaa +ggctgttttgga-ctcctggactcccatgt------------tcaacacccacaggcagcctctcttcgccc +acttgcgtaggcgaggggagtcaca--------gatttag--t-----------gaaaaggatg-------- +-------att-aggg--------------------tttcttc------ct-ttcccctt---cttattcttt +t----------------------------------------------------------------------- +------------------------------------------------------------------------ +- +>FJ537134.1/1-7580 |Norovirus Hu/GII.4/CHDC5191/1974/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacctttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggagttgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaacgg------ggaggacgaaccagtggtt +tcttacaacg----------ccaa---gaatggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +aactggaacaatcctggagatgtgggatggggagatctaccactatggcttgtatgtggaacgaggcctggt +gcttggcgtgcacaaaccgccagcagctattagcctcgctaaggtcgaacttacaccactctctttgttttg +gagacctgtctacactcccc---agtacctcatctccccagacacccttaggagattgcatggtgaatcgtt +cccttacacagcctttgacaacaactgttatgccttctgttgctgggttttggacctgaacgactcatggct +gag---taggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcccct +tcccaccatggatgattccaaattaaagaaagtggccaacatattcctgtgtgctttatcttcactattcac +tagacctatcaaggacataataggaaagctaaaaccccttaacattctcaatattttagcttcatgtgattg +gacctttgcaggcatagtggaatctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactacgaactgcaggggcctgaggacctcgcagtaga +gctagtgccagtagtgatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcatccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttaaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaaacaaccatttgaccaccctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgccctcctggcgaggatcgcggctgcccgttccctggtacatcgagcaaaggaagaact +ttccagcaggccgagacccgttgtcgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaagatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggacgcgtacaagggagagagggtcgtcctttgggatgactacggtatgagtaatcccatcca +cgatgccctcaggttgcaggagcttgctgacacttgccccctaacactaaattgtgacaggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtacgccgaagcccctgatgttgagaaggcga +agcgcgacttcccaggccaacctgatatgtggaagaatgccttcagccctgacttctctcacataaagctga +tgctggccccgcagggtggctttgacaagaacggcaataccccacatgggaagggtgtcatgaagaccctca +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagttgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcagacagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaggtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtagtgtgagggttgacagggttcagagtgccactgtgcaaaccaacaacgaactagccggcgccc +tgcatcatctcaggtgcgccaggatcaggtactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ccaagccacaactggaggacacggaaga--------agccactggcaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtctcatccgacgacatcaaggttgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggcaagtattctatagaggagtacctccaagacagagacaagtat---t +atgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaggaagaggccaagatccgacaga +gaatctttagaccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggctctgaga +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaagcaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggaccgatgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacactactcatcaag +agaccaactggtgaactcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgc +actgttggaggccaaatgggtatgctcctgacagggtccaatgccaagagtatggacctgggcaccacacct +ggcgactgtggttgtccctacatttacaagagagggaacgactacgtggtcatcggggttcacacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagtgaaggtgaggccacacttgagggcggtgat +aacaaaggcacctactgtggcgctccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agaatcaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggaaccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccattattaacgtcctcgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcatccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgaccccagtttacacaggtgccctcaaggatgagttggtcaaa +actgacaagatatatggcaagattaagaagagactactttggggatcggacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgagctcaaggcccactgtgtcacacttcctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgaaaagcattccaggtatagatatcactatgatgcagactat +t-ctagatgggactcaacgcaacaaagagctatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccacactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggacgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtgccttgcacttcacaatggaattctattgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacatcgttcaggccaattctctcttc +tctttctatggtgatgatgaaattgtgagcacagatataaaattggacccagaaaaactgacggcaaagcta +aaggaatacggactgaagccaacccgccctgacaagactgaaggacctctaatcatttctgaggatctaaat +ggtttgaccttcctgcgaaggactgtaacccgtgatccagctggttggtttggtaaattggaacaaagctca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +aggtggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgctgccattgcagcacctgtggcaggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcagggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggtctaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtattgatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tctactctcaaattgatagcaatgttgtacacaccactcagagctaataatgc +cggggatgatgtctttacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaatatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggat------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgatccaacagaagaaattccagc +tcccctgggaacaccagactttgtaggaaagatccaaggtttgctcacccaaa------------------- +-----cc-----acaagagcggacggctcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgatacgaa +caatgattt---ccaaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccactttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaagcagccccagcaca +atccgatgtggccctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaactccataa +gtcaggctatatcacagtggctcatactggcccgtatgatttggttatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgctt---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttctggactt +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaataatagaaaattg +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaaggtttgatgaaggttaaacaggcagtgctcctagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccagggccacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggggcatt---------------------------------a +cctggaa----------------gaatcaatcctagggttcc------------------------------ +------------------------------tgcacctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attccaatca------aactgtttctac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacagaaatttgtcgcctttcatga---ggggggctctcaacacatcatttgtcacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>FJ537135.1/1-7576 |Norovirus Hu/GII.4/CHDC2094/1974/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggagttggtc-------aagaaaatccc +tcc-----------------------------ccccccgcccaacgg------ggagggtgagccagtggtc +tcttacagtg----------tcaa---agatggcgtttccgggttgcctgagctctccactgtcaggcaacc +agatgagaccaacacggcatttagtgttcccccactcaaccagagagagaacagggatgccaaggagccact +gactggaacaatcctggagatgtgggacggggaaatctaccattatggcttgtacgttgaacgaggcctggt +gcttggcgtgcacaaaccaccagcagccattagccttgccaaggttgaattggcaccactttctttgttctg +gagacctgtgtacgcccccc---agtatctcatctccccagacactctcaggagactgcatggggaatcatt +cccctacacagcctttgacaacaactgctatgccttctgttgctgggttttagacctgaacgattcgtggct +gag---taggaggatgatacagaggacaactggcttcttcaggccttaccaagactggaataggaaacccct +tcccaccatggatgactccaaactgaagaaggtggccaacatattcctgtgtgctttgtcttcactattcac +caggcccatcaaggacataatagggaagctaaggcctcttaacatcctcaacattttggcttcatgtgattg +gacctttgcaggcatagtggaatccctaattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactatgagctacaggggcctgaggacctcgcggtaga +gctagtgccagtagtgatgggggggataggtttggtgttgggattcaccaaagaaaagattgggaagatgtt +gtcatctgctgcatccacattgagggcttgtaaagaccttggtgcatatggactggagatcctaaaactagt +catgaaatggttcttcccaaagaaagaggaagcaagcgagttagccatggtgagatctatcgaggacgcggt +gttggacctcgaagcaattgagaacaatcacttgaccaccctgcttaaggacaaggacagcctggcgactta +catgagaactcttgaccttgaggaagagaaagccaggaagctctcaaccaagtccgcctcacctgatatcgt +gggtacaatcaacgctctcctggcaaggattgcggctgcccgctccctagtacatcgggcaaaggaagaact +ttccagcagaccgagacccgttgttgtgatgatatcaggaaagccagggataggaaagactcacctagccag +agagctggccaagaagatcgcaaccaccctcacaggggaccagagggtgggcctcatcccacgcaatggcgt +tgaccactgggatgcatacaagggagagagggtcgtcctttgggacgactacgggatgagcaaccccatcca +tgacgctctcagattgcaggagcttgctgacacttgccccctgacactaaattgtgataggattgaaaacaa +aggtaaagtttttgacagtgatgccataattatcaccaccaacttggccaacccagcaccactggactatgt +caattttgaggcctg-ctcgaggcgcattgatttcctcgtgtacgccgacgcccctgatgtcgaaaaggcga +agcgcgacttcccaggccaacctgacatgtggaaaaatgctttcagccctgatttctctcacataaagctga +tgctggccccacagggtggttttgacaagaacggcaacaccccacatgggaagggcgtcatgaagaccctca +ccattggttccctcatcgcccgtgcttcagggctcctccacgagaggctggatgagtacgagctgcaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcagacagcttgctgctgaaaataagt +acggactgatggacacaatgagggttggagggcaactcaagggcgttagaaccatgccagagctcaagcaag +cactcaagaacatttcaattaagaggtgccagatagtgtatggtggcagcacttatacacttgaatctgatg +gcaagggtggtgtgaaggtcgacagagttcagagtaccaccgtacagaccaataatgagttagccggcgccc +tgcaccacctcaggtgcgccaggatcaggtactatgtcaagtgtgtccaggaggccctgtactccatcatcc +aaattgcaggggccgcatttgtcaccacgcgcattgtcaagcgcatga------acatacaggacctttggt +ccaagccacaactggagaacacagaaga--------agctgctagcaaagatgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtttcatctgatgacatcaagaccgagggtaagaaaggaaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaagggtctcagtgacgaggagtacgatgagtaca +aaagaatcagggaggaaagaaacggcaagtactctatagaggagtatctccaagacagagacaagtat---t +atgaggaggttgccattgccagggcgactgaggaggacttctgcgaagaagaagaggccaagatccgtcaaa +gaatctttagaccaacaaggaagcaacgcaaggaggagagggcttctctcggtttagtcacaggctctgaga +tcagaaaaagaaacccagatgacttcaaacccaagggaaaactgtgggccgatgacgacagaagtgtcgatt +acaatgagaaactcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttctc-ctagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttt +ggggtgtccatcaaacaaatccaggtacacaaatcaggcgaattttgccgcttgaggttcccaaagccaata +aggactgatgtgacgggcatgatcttagaggaaggtgcccccgaagggaccgtggccacactactcatcaag +aggccaactggtgagctcatgcccttagcggccaggatgggcactcacgcaaccatgaagatccaaggtcgc +actgttgggggccaaatgggtatgctcctgacagggtccaatgccaaaagtatggacttgggcaccacaccc +ggcgactgtggttgtccctacatctacaagagagggaacgactacgtgggcatcggagttcacacagccgct +gcccatggagaaaacactgtcatatgtgccacccagggaagtgaaggtgaggccacacttgaaggcggggat +aataaaggtgcttactgtggtgccccgatcttaggtccaggaagtgccccaaaactcagcaccaaaaccaag +ttctggaggtcatccacagcaccactccctcctggtacctatgagccaccctacctcggtggtaaggatccc +agggttaagggtggtccatcactacaacaagtcatgagggaccagttgaaaccattcactgaaccaagaggt +aaacaaccaaaaccaagtgtgttggaagctgccaagagaaccatcattaatgttcttgaacaaacaatagac +ccacctcagaaatggtcatttgcgcaagcttgcgcttctcttgacaaaaccacctccagtggccatccacac +catatacggaagaatgaatgctggaatggagattcctttacaggtaaattggcagaccaggcctcaaaggcc +aacttgatgtttgaggagggaaagaacatgactccagtttacacaggtgccctcaaggatgagttagtcaaa +actgacaagatatatggcaagatcaagaagaggctactttggggatcggacctggcaaccatgatccggtgt +gcccgggctttcggaggcctaatggatgaactcaaggctcactgtgtcacactccctgtcagagttggtatg +aacatgaatgaagacggccccatcatctttgaaaaacattctaggtacaggtaccactatgatgcagattac +t-ctcgatgggactcaacacaacagagacccatattggctgcagccctagagatcatgg-tcaaattctccc +cagagccacactt-agctcaaatagttgcagaagaccttctatcccccagtgtgatggatgtaggtgatttt +aagatatcaatcaacgagggccttccctttggggtgccttgcacctcacaatggaactccatcgcccactgg +ctcctcaccctctgtgcactctctgaagttacggacctctcccctgacatcatccaggctaattctctcttc +tctttctatggtgatgatgaaattgtgagtacagacatacaattggacccagaaaaactgacagcaaagcta +aaggaatacgggctgaagccaactcgccctgataagactgagggacctctgattatttctgaggacctaaat +ggtttaaccttccttcggaggaccgtgacccgcgacccagctggttggtttggtaaattggaacagagttcg +atactcaggcagatgtactggaccaggggccccaaccatgaggacccttctgaaacaatgataccacattcc +caaaggcccatacaactgatgtccctgctgggtgaggctgcactgcatggcccagcgttctacagcaaaatc +agcaagctagtcatcacagagctaaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +aggtggatgaggttctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgtcggtgctgccattgcagcacctgtggcaggccaacaaaatataattga +cccctggattagaaataattttgtgcaagcccctggtggagagttcacagtgtcccctagaaatgctccagg +tgagatactatggagcgcgcccttgagccctgatttgaacccctatctttctcacctgtccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatcctcgcagggaatgcgttcactgc---cgggaaaatcat +atttgcagcaattccaccaaattttccaactgaaggcttaagccctagccaggttacaatgttcccccacat +aattgtagatgtcaggcaattggaacctgtattaatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tctactctcaaattgatagcaatgttgtatacaccactcagagccaataatgc +cggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccccgattttgatttcatattcct +ggtgccacccacagtcgagtcaagaactaagccattcactgtccctatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcccttagaaaagttgtatacgggtcctagcagtgcttttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgcttctaggcactactcagttgtcagctgtcaatatctgtaattt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggat------------------------------------------------ca---- +-------gccatg----------------------------------attacaca----------------- +----------------atgaatttggtgtcccaaaattggaataactatgatccaacagaggaaatccctgc +tcccctgggaacaccagactttgtgggtaagatccaaggtctgctcactcaaa------------------- +-----cc-----acaagagcagacggctcgact--------cgt-----------gcccacaaagccacagt +gagcactgggagcgttcacttcaccccaaagctgggtagtgtccaattcacca---------ccgacacaaa +caatgactt---tcaaactggccaaaatacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagatggtgatca---ccaccagaatgaaccccaacaatgggtgctcccaaa +ttactcaggcacc-tctggt------cacaatgtgcatctggcccctgccgttgctcccactttccccggtg +agcagcttcttttctttaggtccaccatgcccg------ggtgcagcgggta------cccta--------- +--acatgaatttggattgcctgctcccacaggagtgggtgtcgcacttctatcaggaagcagccccagcaca +atcagatgtggccctgctgagatttgtgaatccagatacaggtagggttttgtttgagtgcaaactccataa +atcaggctacatcacagtggctcacactggtccgtatgatttggttattccccccaatggttatttcagatt +tgattcttgggtcaaccagttttacacacttgcccccatgggaaatggatcggggcgcaag---------cg +tgtgt---------tataatggctggatctttctttgctggattggcatctgatgttcttggttctggactt +ggttctctaatcaatgccgg---agccggagcgatcaatcaaagagtggaatttgaaaataataggaaatta +cagcaagcttccttccaatttagcagcaatttacaacaagcttcctttcaacatgacaaagaaatgcttcag +gctcaaattgatgctactcaaaaattgcagcagggcttaatgcagatcaagcaggcggtgcttctggaaggt +gggttttctgcggcagacgccgctcgtggggcaatcaacgcgcccatgacaaaaaccctggactggagtgga +actaggtactgggctcccgaggccagagtcacaacatacaatgcaggccatttctccccttcc--------- +ca---------------------gccttctaggacgcc---------------------------------g +tctggga----------------ggattagttctgtgacttc------------------------------ +------------------------------tgcatctgtgcgaaattccccc------------------ag +cttatctt-----------ctaaa------------tcttctactgctacaa-------------------- +----------ctgtgt-----attctaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagctggttctggaaccagtgtctcgagcctcccgt------------------c +ggcttc---------------------------------------cagaaccaggagctgggttgaggacca +aaacaggagcgtgtcacccttcatga---ggggagcactcaacacatcatttgttactcctccatctagcag +atcctct---aacc------------------------------agagca---cagtctcaaccgtacccaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagccgctcttcgcat +acatccataagcgaggggagtcacg--------ggtttgaagt-----------gaaaagac---------- +---a-a-t-c-tg--------a-----t------ctttc----------t-tt-------------atttt- +-------a-------at---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>FJ537136.1/1-7580 |Norovirus Hu/GII.4/CHDC3967/1988/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaattggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaaccagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattatggcctatatgtggagcgaggtcttgt +acttggcgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttttg +gagacctgtatacacccccc---agtacctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgctgggtcttagacttaaacgactcgtggct +gag---taggagaatgatccagagaacaactggtttctttagaccctaccaagattggaataggaaacccct +ccctactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcactgttcac +caggcccatcaaagacataatagggaaactaagacctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggtatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctgggtgattacgagttacagggccctgaggaccttgcagtgga +actcgttccaatagtgatggggggaattggtttggtactaggattcaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcctgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagataaagacagcctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgttgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggagctggccaagagaatcgcagcttccctcacaggagaccagcgtgtgggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggaaagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgacgcccttaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgacgctataattatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +ctctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgagcatcagggctactccatgagagattagatgagtatgagctgcagggcc +caactctcaccattttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaataaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagctcaaacaag +cactcaagaatatttcaatcaagaggtgccagatagtgtacagtggatgcacctatacacttgagtctgatg +gcaagggcagtgtgaaagttgacagagttcagagcgctaccgtgcagaccaacaacgagctggccggtgccc +tacaccatctaaggtgtgccagaattagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------atatacaagacctctggt +ccaagccacaagtagaagacacagagga--------gactaccagcaaggacgggtgcccaaaacccaaa-- +-gac----gatgagg---agttcgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctaagtgatgaagagtacgatgagtaca +agaggatcagagaagaaagaaacggtaagtactccatagaagagtaccttcaggaccgggacaagtac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgacgacaggagcgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttc +ggagtccccatcaaacaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggccacactactcatcaag +aggccaactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaagattcaaggacgc +actgttgggggccaaatgggcatgctcctgacaggatccaacgccaaaagtatggacctaggcactacacca +ggtgactgtggctgtccctacatctacaagagggaaaatgactacgtggttattggagtccacacggctgcc +gctcgtgggggtaacactgttatatgtgccacccaggggagtgaaggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agggtcaagggtggcccttcattgcaacaagttatgagggaccagctgagaccatttacagaacccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcagaaatggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccacccgcac +cacatacggaaaaatgactgctggaacggggaatccttcacaggtaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgctcaaggatgagctggtcaaa +actgacaaaatttatggcaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgagcattcggaggcctaatggatgaactcaaggcacactgtgttacactacctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgagaggcattccagatacaaataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagggccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggcctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctccgaaatcacaaacttgtcccctgacattatacaggctaattccctcttc +tccttttatggtgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaagactgagggaccccttgttatctctgaagacttgaat +ggtctgaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaaattggaacagagctca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaactaatgtctttactgggcgaggccgcactccacggcccggcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgctgctattgcagcacctgtagcgggccaacaaaatataattga +cccctggattagaaacaattttgtacaagcccctggtggtgagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaattctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcggcagttccaccaaactttccaactgaaggcttaagccccagccaggtcactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +taatcaatcacatgat---tctacccttaagctgatagcaatgttgtatacaccactcagagctaataatgc +cggggatgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgattttatattcct +tgtgccacccacagttgaatcaagaaccaaaccattcactgtcccaatcttaactgttgaggaaatgtctaa +ttcaaga---ttccccattcctttggaaaagttatatacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgtacgactgatggcgtgctcttaggcactacccagctgtcagctgtcaatatctgtaactt +caggg-----------------------------------------gggatgtcacccaca----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggtatcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagatttcgtgggaaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaggctacagt +gagcactgggagcgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcacaccag- +--------ttggcgtcatccaagacggtgatca---ccaccagaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttcttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatgaacttggattgtctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaagctccataa +gtcaggctatatcacagtggctcacaccggcccgtatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgacgtcctcggctctggactc +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaacagaaaatta +cagcaagcttccttccaattcagtagtaacctacaacaggcttccttccaacatgataaagagatgctccaa +gcacagattgaggctactcaaaaattgcaacaagatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggagcatt---------------------------------g +ccaggaa----------------gaactaatcccagggttcc------------------------------ +------------------------------cgttctctctcggggccccccc------------------ag +tacacttt-----------ctaat------------gcttctactgccactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttccac----------gag--------ac +taggttc--------ttcagctggttctggtactagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagaactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---gaggggctctcaacacgtcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>FJ537137.1/1-7580 |Norovirus Hu/GII.4/CHDC4108/1987/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggcctgcctgagctttccactgtcaggcaacc +ggatgaagccaacacggccttcagtgtccccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggacggagagatctaccattacggcctatatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagactgcacggagaatcgtt +cccctatacagcctttgacaacaattgctatgccttctgttgttgggtcttagacctaaacgactcgtggct +gag---taggcgaatgatccagagaacaactggtttcttcaggccctaccaagattggaacaggaaacccct +ccctactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaagctgagacctcttaacattctcaacatcctggcctcatgtgattg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactaggtgattacgagctacaggggcctgaggaccttgcagtgga +actcgttccaatagtgatggggggaattggtttggtgctgggatttaccaaagagaagattgggaagatgct +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaggcaaatgagctggctatggtaagatccatcgaggatgcggt +gttggacctcgaggcaattgaaaacaaccatatgaccaccctgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaattgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgttgttgtgatgatatcaggcaaaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcttccctcacaggggaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcgtacaagggggagagggtcgttctatgggacgactatggaatgagcaatcccatcca +tgatgccctcaggttacaagagctcgctgatacttgccccctcacgctaaactgtgacaggatcgagaacaa +aggaaaggtctttgacagtgatgccataattatcactaccaatctggccaacccagcgccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgaaaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactgg +cgctggctccacagggtggctttgacaagaatggaaataccccacatgggaagggcgtcatgaagactctca +ccactggctctctcattgcccgagcatcagggctactccatgagaggttggatgagtacgagctgcagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcctttaggcagcttgctgctgagaacaaat +acgggctggtggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagagatgccagatagtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtaaaagttgacagagttcagagtgccaccgtgcagaccaacaacgagctggccggtgtcc +tacaccacctgaggtgtgccagaattagatattatgtcaagtgtgcccaggaggccctgtattccatcattc +aaattgccggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaagacacagagga--------gactaccaacaaggatgggtgccccaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagaatacgatgagtaca +aaaggatcagggaagaaaggaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtagccattgccagggcgaccgaggaggacttctgtgaagaggaagaggccaagattcggcaaa +ggatttttaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagagactcaattttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttttgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagtttttc +ggagtccccatcaaacaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccgatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggccacactactcatcaag +aggccaactggagaacttatgcccttagcagccagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgactgtggctgtccctacatctacaagagggaaaatgactatgtggttattggagtccacacggctgcc +gctcgtggaggaaacactgtcatatgtgccacccaagggagtgagggagaagccacacttgaaggcggtgac +aataagggaacctactgtggtgcaccaatcctaggtccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatccacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggcggcccttcattgcaacaaattatgagggaccagctgaaaccattcacagagcccaggggc +aaaccaccaaagccaagtgtgttagaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaggtggtcattcacgcaagcctgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacttgatgttcgaagaggggaagaacatgaccccagtttacacaggtgcgcttaaggatgagctggtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcagacttagcgaccatgatccggtgc +gctagagcattcgggggcctgatggatgaactcaaggctcactgtgttacacttcctgtcagagttggtatg +aatatgaatgaagatggccccatcatcttcgagagacactccagatatacatatcactatgatgccgattac +t-ctcggtgggattcaacacaacaaagggccgtgctagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccgcatct-ggcccagatagttgcagaagaccttctctcccctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggcctcccctctggagtaccctgcacttctcaatggaattccatcgcccactgg +ctcctcaccctctgtgcactctctgaagttacaaatctgtcccctgacattattcaggctaattccctcttc +tccttttacggtgatgatgaaattgtcagtacagatataaagttggacccagagaaactgacagcaaagctc +aaggaatacggattgaaaccaacccgccctgataaaactgaggggccccttgttatctctgaagacttgaat +ggtctaaccttcctgcggagaactgtgacccgcgatccagctggctggtttggaaaattggatcagagctca +atacttaggcaaatgtactggactagaggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtctttactgggcgaggccgcactccacggcccagcattctatagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +tccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccccgatttgaatccctatctttcccatttgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagtcat +atttgcagcagttccaccaaactttccaactgaaggcctaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttaatccccctacctgatgttaggaataatttctaccacta +caatcaagcacatgat---tctacacttaagttgatagcaatgttgtacacaccactcagagctaataatgc +cggggatgacgtcttcacagtctcttgtcgagttcttacgaggccatcccccgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccattcactgtcccaattttaactgttgaggaaatgtctaa +ttcaaga---tttcccattcctttagaaaagctatacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgtacgactgatggcgtactcttaggcactacccagctgtcagctgtcaatatctgtaactt +caggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ta---- +-------gccatg----------------------------------actataca----------------- +----------------atgaatttggtatcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacgccagattttgtgggaaagatccaaggcttactcacccaga------------------- +-----cc-----acaagagcggacggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcattccaaagctgggtagtgtccaattcacca---------cggacacgaa +taatgactt---ccaaactggccaaaacacaa---------------------------aattcaccccag- +--------ttggtgtcatccaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctggcccctgccgtcgcccccacttttccgggcg +agcagcttcttttctttagatccactgtgcccg------gttgtagcgggta------cccca--------- +--acatgaatctggattgcctactccctcaggaatgggtgtcgcacttttaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagatacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgatttggttctcccccccaatggttatttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgtagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaatagaaaatta +caacaagcttccttccaatttagtagtaatctacaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggctactcagaaattgcaacaagaactgatgaaggttaaacaggcagtgcttctagagggt +ggattttccacagcagacgcggcccgcggggcaatcaacgcccccatgacaaaggctctggactggagcggg +acaaggtactgggcccccgatgccagggtcacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccttcgggggcatt---------------------------------g +ccaggaa----------------ggatgaatcctagggtccc------------------------------ +------------------------------cgctcctgctcggagtcccccc------------------ag +tgtgcttt-----------ctaat------------gctcctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtctcaac----------gag--------ac +taggttc--------ttcagctggttctggtactggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaattgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctcc---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtatacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a-------gt---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>FJ537138.1/1-7580 |Norovirus Hu/GII.4/CHDC4871/1977/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aacggc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtactttctagtat +ggctgtcacttttaaacgag----cccttggggcgcggcctaagcagccg-cccccgagggagataccacaa +aga---------------------cccccacgaccgcccactccggaattgatc-------aagaaggtccc +tcc-----------------------------ccccccgcccaatgg------ggaggacgaaccagtggtt +tcttacaacg----------ccaa---gaatggcgtttctggactgcctgagctttccactgtcaggcaacc +agatgagaacaacacggcatttagtgtccccccacttaaccaaagggagaacagggatgccaaggagccact +aactggaacaatcctggagatgtgggatggggagatctaccattatggcttgtatgtggagcgaggcctggt +gcttggcgtgcacaaaccgccagcagctattagcctcgctaaggtcgaactgacaccactctctttgttttg +gagacccgtctacactcccc---agtacctcatctccccagacacccttaggagattgcatggtgaatcgtt +cccttacacagcctttgacaacaactgttatgccttctgttgctgggttctggacctgaacgattcatggct +gag---caggaggatgatacagaggacaactggcttcttcagaccttaccaggattggaacaggaagcccct +tcccaccatggatgattccaaattaaagaaagtggccaacatattcctgtgtgctttgtcttcactattcac +tagacctatcaaggacataataggaaagctaagaccccttaacattctcaatattttagcttcatgtgattg +gacctttgcaggcatagtggaatctctaatcctcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactgggtgactacgaactacaggggcctgaggacctcgcagtaga +gctagtgccagtagtaatggggggaataggtttggtgctaggatttaccaaagaaaagattgggaagatgtt +gtcatctgccgcgtccacactgagggcctgtaaagaccttggtgcatatgggctggagatcttaaaactagt +catgaagtggttcttcccgaagaaagaggaggcgagtgagttggccatggtgagatccatcgaggacgcggt +gttggacctcgaagcaattgaaaacaaccatttgaccaccctgcttaaggacaaggacagcctggcaactta +catgagaactcttgaccttgaggaagagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaatgctctcctggcgaggatcgcggctgcccgttccctggtacatcgagcaaaggaagaact +ttccagcaggccgagacccgttgttgtgatgatatcaggaaaaccaggaatagggaagacccaccttgccag +agagctggctaagaagatcgcaaccacccttacgggagaccagagggtgggcctcatcccacgcaatggtgt +tgaccactgggacgcgtacaagggagagagggtcgtcctctgggatgactacggtatgagtaaccccatcca +cgatgccctcaggttacaggagcttgctgacacttgccccctaacactgaattgtgataggattgagaacaa +aggtaaagtttttgacagtgatgctataattatcaccactaacttggccaacccagcaccactggactatgt +caactttgaggcgtg-ctcgaggcgcattgatttcctcgtgtacgccgaagcccctgatgttgagaaggcga +agcgcgacttcccaggccaacctgatatgtggaagaatgccttcagccctgacttctctcacataaagctgg +tgctggccccgcagggtggctttgacaagaacggcaacaccccacatgggaagggtgtcatgaagaccctta +ccatcggttctctcatcgcccgtgcttcaggactcctccatgaaaggctggatgagtacgagctacaaggcc +cagccctcacaaccttcaactttgaccgaaacaaagtgctcgctttcaggcagcttgctgctgaaaacaagt +acgggttgatggatacgatgagagttggagggcaactcaagggcgtcagaaccatgccagagctcaagcaag +cactcaagaacatctcaattaagaagtgccagatagtgtatggtggcagcacctacacacttgaatctgatg +gcaagggtagtgtgagggttgacaaggttcagagtgccactgtgcaaaccaacaacgaactagccggcgccc +tgcatcatctcaggtgcgccagggtcaggtactatgtcaagtgtgtccaggaagctctgtactccatcattc +aaattgcaggggctgcgtttgtcaccacgcgcattgtcaagcgcatga------acatacaggatctatggt +ctaagccacaactggaggacacggaaga--------agccactggcaaagacggatgcccaaaacccaaa-- +-gat----gatgagg---agtttgttgtttcatccgacgacatcaaggttgagggcaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcgagtaaaggtctcagtgatgaggagtacgacgagtaca +aaagaatcagggaggaaagaaacggcaagtactctatagaggaatacctccaagacagagacaagtat---t +acgaggaggttgccatcgccagggcgactgaagaggatttctgtgaagaggaagaggccaagatccgacaga +gaatctttagaccaacaaggaaacaacgcaaggaggagagggcttctctcggtctagtcacaggctctgaaa +tcaggaaaagaaacccagatgacttcaaacccaagggaaagttgtgggccgatgacgacagaagtgtcgatt +acaacgagaagctcagttttgaagccccaccaagcatctggtcaaggatagtcaactttggttcgggttggg +gtttctgggtttccc-ccagtctgttcataacatcaactcatgttataccccagggcacacaggagttcttc +ggagtgtccatcaagcaaatccagatacacaaatcaggcgaattctgccgcctgaggttcccaaaaccaatc +aggaccgatgtgacaggcatgatcttagaggagggtgcccccgaaggcaccgtggccacactactcatcaag +agaccaactggtgagctcatgcctttagcagccaggatgggcactcatgcaaccatgaagatccaaggtcgc +actgttggaggccaaatgggtatgctcctgacagggtccaatgccaaaagtatggacctgggcaccacacct +ggcgactgtggttgtccctatatctacaagagagggaacgactacgtggtcatcggggttcatacggctgct +gcccgaggagggaacactgtcatatgtgccacccagggaagtgaaggtgaggccacacttgagggcggtgac +aacaaaggcacctactgtggcgctccgatcctaggtccaggaagtgccccaaagctcagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctcggtggtaaggacccc +agaatcaagggtggcccctcactacaacaagttatgagggaccagttgaaaccattcacggaaccaagaggc +aaacaaccaaagccaagtgtgttggaagctgccaagagaaccatcattaacgtccttgaacaaacaatagac +ccacctcagaaatggacgtttgcgcaagcttgcgcgtctcttgacaagaccacctccagtggtcacccacac +cacatacggaagaatgaatgctggaatggagattccttcacaggcaagttggcagatcaggcctcaaaggcc +aacttgatgtttgaggaggggaagaacatgactccagtttacacaggtgccctcaaggatgagttggtcaaa +actgacaagatatatggcaagattaagaagagactgctttggggatcagacctggcaaccatgatccggtgt +gcccgggcgttcgggggcctaatggatgagctcaaggcccactgtgtcacacttcctgtcagagttggcatg +aacatgaatgaggatggccccatcatctttgaaaagcattccaggtatagatatcactatgatgcagactat +t-ctagatgggactcaacacaacaaagagctatattggccgcagccctagagatcatgg-tcaaattctccc +cagagccacactt-agcccagatagttgcagaagaccttctatcccccagcgtgatggacgtgggtgatttc +aagatttcaatcaacgagggcctcccctctggggtaccttgcacttcacaatggaactctatcgcccactgg +ctcctcaccctctgtgctctctctgaagtcacggatctctcccctgacattgttcaggccaactctctcttc +tctttctatggtgatgatgaaattgtgagcacagatataaaaatggacccagaaaaactgacggcaaagcta +aaggaatatggactgaagccaacccgccctgacaagactgaaggacctctaatcatttctgaggatctaaat +ggtttgaccttcctgcgaaggactgtaacccgcgatccagctggttggtttggtaaattggaacaaagctca +atactcaggcagatgtactggaccaggggccccaaccatgaggacccatctgaaacaatgataccacattcc +caaaggcccacgcagttgatgtctttgctgggtgaggctgcactgcacggcccagcattctacagcaagatc +agtaaactagtcatcacagagttaaaggaaggtggcatggatttttacgtgcccagacaagagccgatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcctgttgttggtgccgccattgcagcacctgtagcaggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcacctgtccagaatgtacaa +tggttatgcaggtggttttgaagtgcaagtaatcctcgcagggaacgcgttcactgc---cgggaaagtcat +atttgcagcagttccaccaaattttccaactgaaggtctaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaactggaacctgtattgatccccctacctgatgttaggaataatttctatcatta +taatcaagcacatgat---tctaccctaaaattgatagcaatgttgtatacaccactcagagctaataatgc +cggagatgatgtctttacagtctcttgtcgagtcctcacgagaccatcccccgattttgattttatattcct +ggtgccacccacagttgaatcaagaactaaaccatttactgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagctgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactactcagctgtcagctgtcaatatctgcaactt +caggg-----------------------------------------gggatgtcacccgtg----------- +-----------ttgggat------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatttggtgtcccaaaattggaataattatgacccaacagaagaaattccagc +tcccctgggaacgccagactttgtgggaaagatccaaggtttgctcacccaaa------------------- +-----cc-----acaagagcggacggttcgacc--------cgc-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ccgatacgaa +caatgattt---ccaaactggccaaaacacaa---------------------------aatttaccccag- +--------ttggtgtcatccaagacggtgatca---ccatcagaatgaaccccaacaatgggtactcccaaa +ttactcaggcaca-tctggt------cacaatgtgcatctggcccctgccgttgcccccactttcccgggtg +agcagcttcttttctttaggtccactatgcccg------ggtgtagcgggta------cccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgctgcacttttaccaggaagcagccccagcaca +atccgatgtggctctgttgagatttgtgaatccagacacaggtagggttctgtttgagtgcaaactccataa +atcaggctatatcacagtggctcacaccggcccgtatgatttggttatcccccccaatggttacttcagatt +tgattcttgggtcaaccagttctacacactcgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggacctttctttgctggattggcatctgatgtcctcggttccggactt +ggttctctaatcaatgctgg---agctggagccatcaatcaaaaagttgaatttgaaaacaatagaaaatta +caacaagcttcttttcaattcagtagtaatctgcaacaggcttccttccaacatgataaggagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaaggtttgatgaaggttaaacaggcggtgctcttagagggt +gggttttccacaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccccgatgccagggtcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------gcctttgggggcatt---------------------------------a +cctggaa----------------ggaccaatcctagggttcc------------------------------ +------------------------------tgctcctgctcggagctccccc------------------ag +ttcacttt-----------ccaat------------gctcctactgccactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtgccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcatttgtcacccctccatctagtag +atcctcc---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agagattttgga-ctcctggactggcgctt------------ttaacacgcgcaggcagcctctcttcgcac +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt-------------tcttt- +-------a-------at---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaaaa-------- +------------------------------------------------------------------------ +- +>GQ845366.2/1-7560 |Norovirus Hu/GII.4/Westmead/NSW3639/2008/AUS, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtctgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaactgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaatatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcagggacctgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgaggacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagtagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattatcatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcggggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gtaagggcaatgtgaaagttgacagggttcagagcacttccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgctagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----attgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtacctacaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctcttggtctagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaattatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatccaggtacacaagtcaggcgaattttgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggcgcgcccgaaggtaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctacctaggtggcaaggacccc +agggtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggc +aggccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaatcgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcattcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaactagtcaaa +actgacaaaatttatggtaagattaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctctt +cagaaccacattt-ggctcaggtagtagcagaagacctcctttctcctagcgtggtggatgtaggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaacttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaactcgccctgataaaactgaaggacctcttgttatttctgaagacttagac +ggtttgacttttctgcggagaactgtgacccgcgacccagctggttggtttggaaagctggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagttaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatcttaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtctttacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttccctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ctacactgggagtgccccctttactccaaagctgggcagtgtccaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaaa +ttattcaggtaga-aatgtc------cctaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgtagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcatactggccagcatgatttggtcatcccctccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaagttg +cagcaagcttccttccagtttagcagtaatttacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaatgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------aacttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ccatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccat------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GQ845367.2/1-7559 |Norovirus Hu/GII.4/Orange/NSW001P/2008/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggcttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +tactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggttgagctaacgccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagactctctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaactgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgctctgtcctcactgttcac +caggcccataaaagatataatagggaagataaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggatctgaggaccttgcagtgga +gctcgtccccgtggtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagaccttggtgcttatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgagctggctatagtgaggtctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacacttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaaagccctcctggcgagaaatgctgccgcacgttctctggtgcaccgagcgaaggaagagct +ttccagcagaccaagacctgtggtgttgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtgggcctcatcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggttgtcctatgggacgattatggaatgagcaaccctattca +cgatgccctcaggctgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccagcctgacatgtggaagaacgccttcagttctgatttctcacacataaaactag +cactggccccacagggtggtttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +cagctctcaccaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaataaat +atggattgatggacacaatgagagttgggaaacaactcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatgtctcaatcaagaagtgccaaatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcaatgtgaaagttgacagaatccaaagcgcctccgtgcagaccaacaatgagctggctggtgccc +tgcaccatttgaggtgcgccagaatcagatattatgtcaagtgtgtccaggaggccctatattccatcattc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaatccaag-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggctctgaaa +ttaggaaaagaaacccagatgacttcaaacccaaggggaaattgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgagaatagtcaactttggttcaggctggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggcgcacctgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaagagcatggacctgggtactacacca +ggtgattgtggctgtccctatatctacaagagaggtaatgactatgtggtcattggagtccacacggctgcc +gcacgtggggaaaacactgtcatatgtgccacccaggggagtgaaggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaacacttagcaccaagaccaaa +ttctggaggtcgtccacagcaccgctcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggtccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aaaccaccaaagccaagtgtattagaagctgccaagaagaccatcattaatgcccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggtcatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagagcatgaccccagtctacacagctgcgctcaaggatgagttagttaaa +actgacaaaatttatggtaagatcaagaagagacttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacacatatcactatgatgctgattac +t-ctcgatgggactcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaggaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaacttgtcccctgataccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctaacttttctgcggagaactgtgacccgtgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatggagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctctccacggcccagcattttacagcaaaatc +agcaaattggtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgccattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatatgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggtttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacccgatgttaggaataatttctaccatta +taatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgaatcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaagg---ttccccattcctttggaaaagctgttcacgggccccagtagtgcctttgttgttcaaccaca +aaacggcaggtgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttgcagg------------------------------------------------ca---- +-------gtcgta----------------------------------actacaca----------------- +----------------atgaatctggcttcccagaattggaatagttatgacccaacagaagaaatcccagc +ccctctaggaactccagatttcgtggggaagattcaaggtgtgctcacccaaa------------------- +-----cc-----acaaggacggatggctcgacc--------cgc-----------ggccacaaagctacagt +gtacactgggagcgccgacttttctccaaaactgggtagagttcaatttgcca---------ctgacacaga +caatgattt---tgatgctaaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgttatccaggatggtaatactgcccaccgaaatgaaccccagcaatgggtgctcccaag +ttactcaggcaga-aatact------cataatgtgcacctggcccccgctgtagcccccacttttccgggtg +agcagctcctcttcttcagatctaccatgcccg------gatgcagcgggta------cccca--------- +--acatggatttggactgtctgctcccccaggaatgggtgcagtatttctaccaggaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgttacagtggctcacactggccaacatgatttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacactcgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgacgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgagagttaaacaagcaatgctcctagagggt +ggattctttgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaagctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatataatgcaggccgcttttccacccct--------- +ca---------------------atcctcgggggcacc---------------------------------a +ccaggaa----------------gagctaatcttagggctac------------------------------ +------------------------------tgtccccgcccggggttcctct------------------ag +catatctt-----------ctgac------------tcttctattgctactt-------------------- +----------ctgtgc-----attcaaatca------aaccacttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatctcgtttgtcaccccaccacctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acatccgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GQ845368.2/1-7559 |Norovirus Hu/GII.4/Sutherland/NSW505G/2007/AUS, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacacaacaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacaacct-cccccgagggacataccacaa +aaa---------------------cccccacgaccgcccaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgagctagtggtt +tcttacagtg----------ttaa---agatggcgtctctggtctgcccgacctcaccactgtcaggcaacc +tgaagaagacaatactgccttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccact +aactggaacaattctggaaatgtgggatggagaaatctaccactacggtctttatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccattagcctcgccaaggttgaactgacaccactctctctgttctg +gagacctgtgtacacccccc---agtatctcatctctccagacactctcaaaaggctgcacggggaaacatt +cccttacacagattttgacaacaactgctatgccttctgttgctgggtcttggacctaaacgactcttggtt +gag---taggagaatgatccagagaacaactggtttcttcagaccctatcaagattggaataggaaacccct +ccccaccatggatgattctaagttaaagaaggtggctaacatattcctatgtgctctatcctcactgtttac +cagacccattaaagacatcatagggaaggtgagacctctcaacattcttaacatcctggcctcatgtgactg +gacttttgcaggcatagtggaatccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttgctaggtgactacgagctgcaggggcctgaggaccttgcagtgga +actcgtaccagtagtgatggggggaattggtttggtgctaggatttaccaaagagaaagttgggaagatgtt +gtcatctgctgcatccaccctaagagcttgcaaagaccttggtgcgtacggactggagatccttaaattggt +catgaaatggttcttcccaaagaaagaggaatctaatgaattggctatggtgaggtccattgaggacgcggt +gctagacctcgaggcaattgagaacaaccatatgaccaccctgctcaaagataaagacagcctggcaaccta +catgagaaccctagaccttgaagaggagaaagctagaaaactctcaaccaagtctgcctcacctgacatcgt +gggtacaatcaacgctcttctggcgagaattgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaataagacctgttgttgtgatgatatcaggcaaaccaggaatagggaagacccaccttgccag +ggaactggctaagaaaatcgcaacctccctcacaggggaccagcgtgtgggtctcatcccacgtaatggtgt +cgaccactgggacgcatacaagggggagagggtcgttctgtgggacgactacgggatgagcaaccctatcca +tgatgctctcaggttacaagagctcgctgacacttgccccctcacgctgaactgcgataggattgaaaacaa +aggaaaggtctttgacagtgatgccataatcatcaccaccaatttggccaacccagcaccgctggattatgt +caactttgaagcttg-ctcgaggcgcattgacttcctcgtttatgcagaagcccctgaagtcgagaaggcga +aacgtgacttcccaggtcaacccgacatgtggaagaacgctttcagccctgatttctcgcacataaaactgt +cactggctccacaaggcggcttcgacaagaatgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggttcgctcattgctcgggcatcagggctactccatgagaggctggatgagtacgagctacaaggtc +caactccaactacttttaactttgaccgcaacaaggtgcttgctttcaggcagcttgccgctgagaacaaat +atgggctgatggacacaatgaaaattgggaaacagctcaaggatgtcaaaaccttgccagaactcaaacagg +cactcaggaacacctcaattaagaagtgccagatagtgtacggtggttccacttacacgcttgagtctgatg +gaaaaggcaatgtgaaagttgacagagttcaaagcgccactgtgcagaccaacaatgagctggccggtgccc +tacaccatctgaggtgtgccagaatcaggtattatgtcaagtgcgttcaagaggccctgtattccatcattc +aaattgccggagccgcatttgtcaccacgcgcatcgctaagcgcatga------acatacaaaatctctggt +ctaaaccgcaagtggaagacacagaaga--------caccgccaacaaggacgggtgccccaaacccaaa-- +-gat----gatgaag---agttcgttgtctcgtccgatgacattaagactgagggcaagaaggggaagaaca +agaccggccgtggcaagaagcacacagccttttcaagtaaaggccttagtgatgaagagtacgatgagtaca +aaaggatcagggaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaagaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggcaaaaattcggcaaa +ggatcttcagaccaacgaggaaacaacgcaaggaagagagggcctctcttggtctagtcacaggctctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgttgact +ataatgagaaacttgattttgaagccccaccaagcatctggtcgaggatagtcaattttggttcgggttggg +gcttttgggtctccc-ccagcctgttcataacatcaactcatgtaatacctcagggtgcacaagagtttttc +ggagtgcccatcaaacaaattcagatacacaaatcaggtgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggtatgatcctagaagaaggtgcgcccgaaggcactgtggtcacactactcatcaag +aggtcaactggagagcttatgcccctagcagccagaatgggaacccatgcaaccatgaaaatccaaggacgc +actgttggaggccaaatgggtatgctcttgacagggtccaacgccaagagcatggacctaggcaccacacca +ggtgactgtggttgtccctacatttacaagagaggaaatgactatgtggttattggggtccacacggctgct +gctcgcggtgggaacactgtcatatgtgccacccagggaagtgagggagaagccacacttgaaggcggtgac +aacaaggggacctactgcggtgcgccaatcctaggcccaggaaacgccccaaaactcagcaccaaaactaaa +ttttggagatcatccacagcaccactcccccctggcacctatgaaccggcctatcttggtggcaaggaccct +agagtaaagggcggcccctcattgcaacaagttatgagggaccagttgaaaccattcacagaacccaggggc +aaaccaccaaagccaagtgtgttggaggccgccaagaaaaccgtcatcaatgtccttgagcaaacaattgat +ccacctgaaaaatggtcatttgcacaagcctgtgcgtctcttgacaagacaacatccagtggccatccgcac +cacatgcggaaaaatgactgttggaatggggagtccttcacaggcaagttggcagaccaggcttctaaggcc +aacctgatgtttgaagaggggaagaacatgacaccagtttacacaggtgcactcaaagatgaactggtcaaa +actgacaagatttatggcaagatcaaaaagaggcttctttggggctcggacctagcgaccatgatccggtgc +gctcgagcgttcggaggcttgatggatgaactcaaggcacactgtgtcacacttcctgttagagttggtatg +aacatgaatgaggacggccccatcatctttgagaagcactccagatacaaataccactatgatgctgactac +t-cacgatgggattcaacacagcagagagccgtgttagcagcagccctggaaatcatgg-ttaaattctccc +cagaaccacactt-ggcccaaatagttgcagaagaccttctatctcctagtgtaatggatgtgggagatttc +aagatatctatcaatgagggccttccctctggtgtgccttgcacctcgcaatggaattccatcgcccactgg +ctcctcaccctctgtgcactctctgaagtcacaaatttgtcccctgatattatacaagccaattccctcttc +tctttttatggtgatgatgaaattgtcagtacagacataaaactggatccagagaaactcacagcaaagctc +aaggaatacgggttgaagccaacccgccctgacaagactgagggacccctcgtcatctctgaagacttggac +ggcctcaccttcctgcggcgaactgtaacccgtgacccagcaggttggtttggaaaactggagcagagctca +attcttaggcaaatgtactggactagaggccccaatcatgatgacccatctgaatcaatgataccacactcc +caaagacccatacaattaatgtctctgttgggtgaggccgcacttcatggcccagcattctacagtaaaatc +agcaaactagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaacataattga +cccctggattagaaataattttgtacaagcccctggtggagaattcacagtgtcccccagaaatgctccagg +tgaaatactatggagcgcacctttaggccctgatttgaatccctacctttcccatttgtctagaatgtataa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cgggaaggtcat +atttgcagcagtccctccaaactttccaactgaaggtctaagccctagtcaagttaccatgttcccccatat +aattgtagatgttagacaattggagcctgtgttgattcccctacctgatgttaggaataatttttaccatta +caatcaaacaaatgac---cctaccattaaattgatagcaatgttgtatacaccacttagagctaataatgc +tggggacgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgattttgacttcatattctt +agtgccacccacagttgaatccagaactaaaccatttactgtcccaatcttaactgttgaggaaatgaccaa +ctctaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgctgtcaacatctgcacctt +caggg-----------------------------------------gggatgtcacccaca----------- +-----------ttacagg------------------------------------------------ct---- +-------cccgta----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaattatgacccaacagaagaaattccagc +ccctctggggaccccagattttgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaggagatggctcgact--------cgt-----------ggccacaaagccacagt +gtacactgggagtgccgacttcgccccaaaattgggcagagttcaattcgcta---------ctgacacaga +caatgattt---tgaatccaaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggcaacaccacccatcaaaatgaaccccaacaatgggtactcccagg +ttactcaggtaga-gatggc------cacaatgtacacctagcccctgccgtcgcccccacctacccgggtg +agcaactccttttctttaggtccaccatgcccg------gatgtagcgggta------tccca--------- +--acatgaatctagattgcttactcccccaggaatgggtgcagcacttctaccaagaagcagctccagcaca +atctgaagtggctctgctaagatttgtgaatccagatacaggtagggttttgtttgagtgcaagctccataa +atcagggtatgtcacagtggctcatactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggtcaaccagttttacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttctctaatcaatgctgg---ggctggggctatcaaccaaaaagttgagtttgaaaataacagaaaatta +caacaagcttccttccaatttagtagcaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactcaaaaattgcaacaaggtttaatgaaggtcaaacaggagatgcttttagaaggt +ggattctttgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagtgga +acaaggtactgggctcctgatgctaggatcacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcaggggcatt---------------------------------g +ccaggta----------------gaactaatcttagggccac------------------------------ +------------------------------tgtccccgctcggggctcctct------------------ag +tgcatttc-----------ctaat------------acttcccctgtcactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------ttcagcaggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggggctgggttgaggatca +aaacagaaatttgtcaccttttatga---ggggggctctcaacacatcattcgtcaccccaccatctagcag +atcctcc---agtc------------------------------aaagca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +atgttcgcaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GQ845369.3/1-7560 |Norovirus Hu/GII.4/Armidale/NSW390I/2008/AU, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgcc------------aacagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gtatgctatctaacat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccg-cccccgaaggaaataccaccc +aga---------------------cccccacgaccacccacaccagaattggtc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcctacagcg----------ccaa---agatggcgtttccggcctgcctgagctcaccactgtcaaacaacc +ggaagaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggaaccact +aactggaacaattattgaaatgtgggatggagaaatataccactacggcctgtatgtggaacgaggtcttat +acttggtgtgcacaagccaccggcagccatcagccttgccaaggtcgagctaacaccactctctttgttctg +gaggcctgtgtatacccccc---agtatctcatctctccagacactcttaggagactgcatggagagtcatt +cccctacactgcatttgacaacaattgctacgccttctgttgttgggtgttagacctaaacgactcatggct +aag---caggagaatgattcagagaacaacaggtttcttcaggccataccaggattggaacaggaaacccct +tcccactatggatgattccaaattaaagaaggtggctaacatattcttgtgcactttgtcttcactattcac +cagacccattaaggacataatagggaagttgaaacctcttaacattctcaacattctggctacgtgtgattg +gaccttcgcaggcatagtggagtccctgatactcatggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgattacgagctgcaaggacctgaggaccttgcagtaga +actagtcccaatagtgatgggggggataggtttggtgctaggatttaccaaagagaaaattggaaagatgtt +gtcatctgctgcatccactttgagagcctgtaaagaccttggtgcatacggactggaaattttgaaattggt +catgaaatggttcttcccaaagaaagaggaagcaaacgaattggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccacatgaccaccctgctcaaagacaaagacagcttggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaaatctgcttcacccgatattgt +gggcacaatcaactctcttctggcaagaatcgctgctgcacgctccctagtgcatcgggcgaaagaagagct +ctccagcaggccgagacctgttgttgtgatgatatcgggaaaaccagggatagggaaaactcaccttgccag +ggagctggccaagaagatcgcagcctccctcacaggggaccagcgcgtgggtctcatcccgcgcaatggtgt +cgaccattgggacgcgtacaagggagaaagggttgtcctgtgggacgactatggaatgagcaaccccattca +tgatgccctcaggttgcaggaacttgctgacacttgccccctcacgctaaattgtgacaggattgagaacaa +agggaaagtctttgacagtgatgccataattatcaccaccaatctggccaacccagcaccactggattatgt +caactttgaagcgtg-ctcgaggcgcattgacttcctcgtgtacgcagaggctcctgaggtggaaaaagcaa +agcgcgacttcccaggccaacctgacatgtggaagaacgctttcagtcctgacttctcgcacataaaactgt +cattggctccacagggtggttttgataagaacggcaacaccccacatggaaaaggcgtcatgaaaaccctca +ctaccggttccctcatcgcccgagcatcagggttactccatgagaggctagatgaatatgaattgcaaggcc +caactctcaccactttcaactttgaccgcaacaagatccttgctttcagacagcttgctgctgaaaacaagt +atgggctcatggacacaatgagagttggaaaacagctcagggatgtcaagaccatgccagacctcaaacaag +cactcaagaatgtctcgatcaaaaagtgccagatagtgtacggtggtagcacctacacacttgaggccgatg +gcaagggcagtgtgaaagttgacaaagtgcaaagtgccactgtgcaaaccaacaacgaactagccggtgccc +tacaccacctaaggtgcgccagaattagatactatgtcaagtgtgtccaggaggcactgtactccatcatcc +aaattgctggggctgcatttgtcaccacgcgcattactaagcgcatga------acatacagaacctctggt +ccaagccacaggtggaggacacagaaga--------ggcggccagcaaagatggttgctcaagacccaaa-- +-gat----gatgaag---agtttgtcgtttcatccgacgacatcaaaactgagggcaagaaagggaaaaaca +agactggccgtggtaagaagcacacagccttctcaagcaaagggctcagtgatgaggagtacgatgagtaca +agagaatcagggaagagaggaatggcaagtactccatagaagagtaccttcaggacagagacaagtat---t +atgaggaggtggccattgccagggcaaccgaagaggacttctgtgaagaagaagaggccaaaatccggcaga +gaatttttagaccaacaaggaaacaacgcaaagaagagagggcctctctcggcttggtcacaggctctgaaa +tcaggaagagaaacccagaagacttcaaacccaagggaaaactgtgggccgacgatgacagaagtgttgact +acaatgagaaactcaactttgaggccccaccaagcatctggtcgcggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgtttataacatcaacccatgtcataccccaaggtacaaaagagttcttc +ggagtccccatcaaacaaatccagatacacaaatcaggtgaattctgccggttaagattcccaaagccaatc +agaactgatgtgacgggcatgattctagaagaaggtgcgcccgaaggaaccgtggccacactactcatcaag +agaccaactggggaactcatgcctctggcagctagaatgggaacccatgcaaccatgaagattcaagggcgc +acagttggaggacaaatgggcatgctcctgacagggtccaacgccaagagtatggacctaggcacaacaccg +ggtgactgcggctgtccctacatctacaagagggggaatgactacgtggtcataggagtccatacggccgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgaaggggaagccacacttgaaggtggtgac +aataaaggaacatactgtggtgcaccaatcttgggcccagggagtgccccaaaactcagtactaagactaag +ttttggagatcatccacaacaccactcccacctggcacctacgaaccagcctacctcggtggcaaggacccc +agagtcaaaggtggcccttcattgcaacaagttatgagggaccagctaaaaccattcacagaacccagaggt +aaaccaccaagaccaagtgtgttggaagctgccaagaaaaccatcatcaatgttcttgagcaaacaattgac +ccaccccaaaaatggtcattcgcgcaagcttgcgcatctcttgacaaaaccacttccagcggccacccgcac +catatgcggaagaatgactgttggaacggggagtcattcacaggaaaattagcagatcaggcctccaaggcc +aatctaatgtttgaagaggggaagaacatgactccagtctacacaggtgcacttaaggatgaattggtaaag +actgacaaaatttatggtaagatcaagaagaggcttctgtggggctcagacctggcgaccatgatacggtgc +gcccgagcttttggaggccttatggatgaactcaaggcacattgtgtcaccctccctgtcagagttggtatg +aacatgaatgaggatggccccatcatctttgagaaacactccagatataaatatcattatgatgctgattat +t-cccggtgggactcaacacaacaaagggatgtgctagcagcagccctagaaatcatgg-ttaaattctctc +cagaaccacacct-ggctcaaatagttgcagaagacctactttcccctagtgtaatggatgtgggtgacttt +caaatatcaataagtgagggactcccctctggggtgccttgcacctcccaatggaattccatcgcccattgg +ctcctcactctttgtgcactctctgaagtcacggacctgtcccctgacatcattcaggccaattccctcttc +tccttctatggtgatgatgagattgtgagtacagacataaagttggatccagagaaactgacggcaaaactc +aaggagtacgggctgaaaccaacccgccccgacaaaactgaaggaccccttgttatctctgaagatctggat +ggcctgacattcctgcggaggactgtgacccgtgacccagctggttggtttggaaaattggaacaaagctca +atcctcaggcaaatgtactggaccaggggccccaaccatgaagatccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctctgctgggcgaggctgcgctccacggcccggcattctatagtaaaatt +agtaagttagtcattgcagagttgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctaagcacgtgggagggcgatcgcaatctggctcccagtattgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtaggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtgtcccctagaaatgctccagg +tgagatactatggagtgcgcccttgggccctgatttgaacccttacctttctcatctggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagttccacctaactttccaactgaaggcttgagccccagccaggttactatgttcccccatat +aatagtagatgttaggcaattggaacctgtgttaatccccttacctgatgttaggaataacttctatcacta +caaccaatcaaatgac---cctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgagaccatcccctgactttgatttcatatttct +ggtaccaccaacagttgaatcaagaaccaaaccatttaccgttccaatcttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaggttgtacacgggtcccagcagtgcttttgttgtccagccaca +aaacggcaggtgcacgactgatggcgtgctcttaggcaccacccagctgtctgctgtcaacatctgcacctt +tagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgca----------------------------------attataca----------------- +----------------atgaatttggcctctcaaaattggaacaactatgatccaacagaagaaatcccagc +ccccctgggcaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaagaagtgatggctcgact--------cgc-----------ggccacaaggccacagt +gctcactgggagtgccgacttcgccccaaaattgggcagagtccaattcgcca---------ctgacacaga +caacgattt---cgaatctggccaaaacacga---------------------------aatttaccccag- +--------ttggcgtcatccaggatggttccactacccaccgaaatgaacctcaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcatctagcccctgctgttgcccccacttacccgggtg +agcaactcctttttttcaggtccactatgcccg------gatgtagcgggta------cccca--------- +--acatggatctagattgtttgctcccccaggagtgggtgcagcacttctaccaagaagcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctctttgagtgcaagctccataa +atcaggatatgtcacagtggctcacactggtcagcatgatttggttattccccccaatggttattttagatt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcttttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +tcaggaa----------------gaattaatcccaggactcc------------------------------ +------------------------------cacccccgctcggggctcctct------------------ag +tacatctt-----------ctagt------------gcttctactgctactt-------------------- +----------ctgtat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatctgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------t-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GQ845370.2/1-7523 |Norovirus Hu/GII.g-GII.12/StGeorge/NSW199U/2008/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgctgct------------atcagc +a------ac----aacgacatcgcaaaatcttcaagtgacg---------------gagtactaagtagtat +ggctgtcacttttaaacgag----ccctcggggcccggcctaaacagccg-cccccgagggaaacaacacaa +aaacaaaa---------------acctccacgaccgcccaccccggagttaatc-------aaaaagattcc +acc-----------------------------tcccccgcccaacgg------ggaggacgatatagtggta +tcctacagtg----------ccaa---agagggggtctccggcctgcctgagctatccaccgtcaggcagcc +ggatgagacaaacacagcatttagtgtccccccactcaaccagagggaaaacagggatgctaaagaaccgct +gcctggcaccatattggaaatgtgggacggagagatctaccactacggcttgtacgtggagcggggtttggt +gcttggggtgcacaaaccaccagcggctattagcctcgcaaaggttgaactaacaccactgtctctgtactg +gagaccagtgtacacccctc---agtacctcatatccccggaaacactcaaaaagctacatggagagacatt +cccttacacggcctttgataacaactgttacgccttctgttgttgggtcttggatctaaacgactcttggct +cag---caggaggatgattcagagaacaactggcttcttcagaccctaccaggactggaacaggaaacctct +ccccactatggatgattccaaattgaaaaaggtggctaatatagtcctgtgtgctttgtcatcactattcac +caggcccattaaggacataataggaaaactaaggcccttaaacatactcaacatactagcttcctgcgactg +gactttcgcaggagtagtggaatccctaattctccttgcagaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactacagggacctgaagatctcgctgtaga +actcgtaccagtagtaatgggggggataggtttggttctaggtttcaccaaggagaagattggcaagatgct +gtcatccgccgcgtccaccctcagagcttgtaaagaccttggagcatatgggttagaaatcctgaagttggt +catgaaatggttcttcccgaagaaagacgaggcaaatgaacttgcaatggtgagatccattgaggacgcagt +gctggacctcgaagcaattgaaaacaatcacatgaccaccctgctcaaagacaaagacagtttggcaaccta +catgaagactctggatcttgaagaggagaaagctaggaaactctccaccaaatccgcttctcctgatattgt +gggcacaatcaattcacttctggcacggattgcagctgcccgttccctggtgcaccgggcaaaagaagagct +ttccagtaggccaagacccgttgttgttatgatatcaggaaagccaggaatagggaagacccatcttgccag +agatttggcaaagaaagttgcagccaccctcacaggagaccagagggtgggcctcatcccacggaatggtgt +cgaccattgggatgcatacaaaggtgagagagtcgtcctttgggatgactatggaatgagtaaccccattca +tgacgcccttaggctacaagaacttgctgacacttgccccctaacattaaattgtgatagaattgagaacaa +aggaaaggtttttgacagtgatgccataattattacaactaatttggctaacccggcaccactggactatgt +taactttgaagcatg-ttcgaggcgtatcgacttccttgtgtacgctgatgcccccgacgttgaaaaggcaa +aacgcgacttcccagggcaacctgacatgtggaaggatgcttttagacctgacttctcacacataaagttaa +tgttggctcctcagggtggttttgataagaacggcaacaccccacatggaaaaggtgtcatgaaaaccctca +catctggctccctcgttgcccgtgcttcaggactcctccacgaaagactggacgagtacgagttgcaagggc +caacacccacaaccttcaatttcgaccaaaacaaggtgttcgcctttaggcagctcgccgctgaaaataaat +acgggctgatggacaccatgagagtgggaagccagctcaagaatgtcaaaactgtgtcagagctcaaacagg +cactcaagaacattgcaattagaaggtgccagatagtctacagtggtctcacatactcacttgaatctgatg +gcaaaggtaatgtaagggttgagaaggtgcaaagtccagctgtgcagaccaacaatgagctaactggcgcac +tacaccatctgaggtgcgctaggattagatattatgttaagtgtgttcaggaagctttgtattccatcatcc +aaattgctggggccgcgtttgtcaccacgcgcattgcaaagcgcatga------acatacaaaacctctggt +ccagaccacaggtggaggatgaggaaga--------gaccaccagcaaagacgggtgcccaaaaccaaag-- +-gat----gaggagg---agtttgtcatctcgtctgaagacatcaaagtcgaaggcaagaagggaaagaaca +agtctggccgtggcaagaaacacacagccttttcgagtaaaggtcttagtgatgaggagtacgatgagtata +aaagaattagagaagaaagaaatggtaagtactccatagaagaatacctccaggacagagacaagtac---t +atgaggaggtggccatagccagggctactgaagaggacttctgtgaggaagaagaagccaagattcgtcaga +ggattttcagaccaacaaggaaacaacgcaaggaggagagggcttcactcggactggttacaggctcagaaa +tcaggaaaaggaacccggatgacttcaaacccaaaggaaaactgtgggctgatgatgacaggagtgtcgatt +acaatgaaaagctcagttttgaggcccccccaagcatctggtcgagaatagtcaactttggatcaggttggg +gcttctgggtctcac-caagcctttttgtaacatccacccatgtcatacctcaaggggcacaagaatttttc +ggtgtttccatcaaacagatccaaattcacaagtcgggtgaattctgccgactaagattcccaaaaccaatt +agaactgatgtgacaggtatgatcctggaggagggggcccctgaagggactgtggccacactgctcataaag +aggccaactggagagctgatgccactggcagctagaatgggtacccatgcaactatgaggatccagggtcga +actgtcggggggcagatggggatgctcctgacgggatccaacgccaagagcatggatttgggtaccacacca +ggtgactgtggatgcccatacatatacaaaagaggaaatgactacgtagtcatcggggtccacacagctgcc +gcccgcggaggaaacactgtcatctgtgcaacacaaggaagtgagggcgaggctgtgcttgaaggtggcaac +aacaaaggcacctattgtggcgccccaatcctaggtccaggaaatgcccccaaactcagtactaaaaccaaa +ttctggaggtcctcaacagcaccactcccacctggcacatatgaaccagcttacctcggaggcaaagacccc +agagtaaaaggtggcccctcattacagcaagttatgagagaccaactgaaaccatttacagaacccagaggt +aagccaccaaagcccagtgtactagaagcagccaaaaagacaatcattaatgtccttgagcaaacaatagac +ccaccccaaaaatggacgttcgcacaggcgtgcgcatccctcgacaaaacaacctctagtggctacccgcac +cacgtgcggaagaatgaacattggaatggggaatctttcacaggaaaattggctgatcaggcttcaaaagct +aacctgatgtttgaggaaggtaaacacatgacaccagtctacacaggagccctcaaggatgagttagtcaaa +actgataaaatatatggcaagatcaagaagaggttgctatggggttcagatctggcaaccatgatccgctgc +gctcgagcgttcggagggttaatggatgaactcaaggctcactgtgtcacactccccatcagggtagggatg +aacatgaatgaggatggccccatcatttttgagaaacactctagatacacctaccattatgatgcagactac +t-ctcggtgggactcaacacagcagagagctgttttagctgcagccctggagatcatgg-taaaattttccc +cagaaccacacct-ggcccagatcgttgcagaggatctcctatctcccagcgtgatggacgtgggcgatttc +aaaatatcaatcactgaaggactcccctctggggtgccttgcacctcacaatggaattctattgctcattgg +ctcctcacgctttgtgcactctctgaggtaacagatttgtctcctgacatcatccaagcaaactcactcttc +tctttctatggtgacgatgaaattgtgagcacagacatcaaattagatccagaaaagctgacagctaaacta +aaagagtatggtctcaagccaacccgtcctgacaagactgaagggcctctggtcatttctgaggacttagat +ggtctgaccttcttacggaggactgtgactcgtgacccagcaggttggtttggaaaattggaacaaagctca +atacttagacagatgtattggaccaggggccccaaccatgaggatcccgctgaaacaatgataccacactcc +caaagacccatacagttgatgtccctattaggtgaagctgcattacatggcccatcattctacagcaaaatc +agcaaattggtcatctcagagttgaaagaaggtggcatggacttttacgtgccaaggcaagagccaatgttt +cgatggatgaggttctcagacttgagcacgtgggagggcgatcgcaatctggctcccaattttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaatga +gaccatggcacttgaaccggtggctggggcttcaatagccgccccactcaccggtcaaaataatgttataga +cccctggattagattaaactttgtgcaggctcccaatggagagtttacagtttcaccccgcaattcgcctgg +ggaagtcctactaaacttggaattaggccctgaactaaatccatatttggcacacctttccagaatgtacaa +tggttatgcaggtggagttgaggtgcaagtactactggctgggaacgcgttcacggc---tggaaaactggt +attcgccgcagttccccctcattttccattagaaaacataagccctggccaaataaccatgttccctcatgt +aattattgatgttaggactttagaaccagtcctattgcctcttccagatgttaggaacaatttctttcacta +caatcagcaaaacgaa---cagaggatgaggcttgtggcaatgctctataccccccttagatctaatggttc +tggtgatgatgtatttactgtctcctgtagagtgcttactcgaccctctcctgattttgatttcaattattt +ggtaccccctacagttgaatctaaaactaaacccttcacactccctatcttgaccataggggagttaaccaa +ttccaga---ttccctgtgcctatagatgaactctacactagccccaatgagagtttggtggtacaacccca +gaacgggagatgcgcgctggatggggagttgcagggtactactcagctcctccccacggcgatctgctcgtt +caggg-----------------------------------------gt------------------------ +---------------------------------------------cggattaatcagaaagtgagtgga--- +---gagaaccatg----------------------------------tttggaat----------------- +----------------atgcaagtcaccaacattaacggaaccccttttgatccaacagaggatgttccagc +tcctctaggtacaccagacttttctggcaagctctttggcgtcctaagccaga---ggga------------ +-----cc------------atgataatgcctgt--------agg-----------agccatgatgcagtgat +tgcaactaattctgctaaatttaccccaaaattgggcgctatacaaattggca---------catgggaaca +agatgatgt---acacatcaaccaacccacca---------------------------aatttactccag- +--------ttggctt------------------gtttgaaagtgaaggttttaatcagtggacactccctaa +ttattctggagcc-ttaaca------ctcaacatggggttggccccccctgtggcccccacatttcctggcg +agcaaattcttttcttcagatcccacattcct-------cttaaaggaggtgt-----ggcag--------- +--acccagttattgattgtctcttgccccaagagtggatccaacacctttatcaggagtcagccccttcaca +aacagatgtagcactgatcagattcacaaatccagacacagggcgtgtcctatttgaagcaaaattgcacag +gagtggctacatcacagtggccaacactggtagcagaccaattgtggtgccagctaatggttacttcaggtt +tgactcttgggttaatcagttttattctctcgcccccatgggaactgggaatgggcgcaga---------ag +ggtgc---------agtaatggctggagctttcatagcaggtcttgctggtgatatagtcaccaatggtatt +ggctcactcgtgaacgctgg---ggccaatgcaataaaccaaaaagtagactttgaaaacaataagcaa--- +------------------------------ctacagcaggcatccttcaatcatgacaaagagatgctgcaa +gctcaaattcaagccaccaaacagctacaggctgatatgattgcaatcagacaaggggtgttgaccgcgggc +ggcttctcccccactgatgcagcaagaggtgcagtcaacgcacccatgacacaggtcttggactggaacggg +actagacattgggcccccggagccatgaaaacaactgctttctccggtgggttcaccagtgct--------- +tc-------------tcatgccaggaccgttgacctga---------------------------------c +taggaaa----------------acatcagccacaccagcctct---------------------------- +------atgcctgtctc--taggcccagttcta--ctgcctctactgtttccacccgttctaccttgattag +tggatcct--------------------------------ctaatccttcttctctag-------------- +----------ctagga-----gttcttccag------tatttcttc---------------------ccaat +ctacttc--------------------------------------------ct------------------c +atcctc---------------------------------------tcggactagtgattgggtacgtagcca +aaacagagcactggagccttatatga---gcggggcgctgcgtacagcctacgtgacacctccatccagtag +ggcttct---agca------------------------------atggca---cagtctcaaccgtgccaaa +agaggttttgga-ctcctggacatctgcat------------tcaacacacacagacaaccgctgtttgctc +atctccgtcggagaggggagtcaca--------agtttag--t-----------gaaaagatgg-------- +-------tct-tttct----t-------------tcattc--------ct-tt------------gaaatc- +--------------tct---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>GQ845024.2/1-7562 |Norovirus Hu/GII.4/Rathmines/NSW287R/2007/AUS, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------ggaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagcttttcaccgtcaggcaacc +ggaagaaaccaatacggctttcagtgtccctccactcaaccagagggagaataaagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccataagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +cagacccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtctggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaaatctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgcccttaggctgcaagaactcgctgacacttgcccccttactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttccttgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctacatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaactatgccagaacttaaacaag +cactcaaaaacatctcaatcaataagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatat---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcgacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcctggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaagattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgcgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggaccagctgaaaccatttacagaacccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctctgatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagaagcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggacttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggggagttcacagtatcccctagaaacgctccagg +cgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggttactatgttcccccacat +aatagtagatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgactaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcagccaca +aaatggcagatgcacgactgatggcgtgctcctaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------actacaca----------------- +----------------atgaatttggctgctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctgggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccgacttcactccaaagctgggcagtgttcaattcagca---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggcagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcacgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttatttgctggattggcatctgatgtccttggctctgggctt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgagagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggattacaacatacaatgcgggccgcttttcctcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatctcagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------tcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgcttcaac----------gag--------ac +ttggttt--------tgcagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcttttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagacaa-------- +---a-a-a-t-tgat-----ta-----t------ctttt----------a-tt----tt-------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>FJ514242.1/1-7559 |Norovirus Hu/GII-4/CUK-3/2008/KR, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaatcctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +cccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattgaagaaggtagctaacatatttctgtgcaccctgtcttcgctatttac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgcagtgga +actcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcgtatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcaa +agcgtgacttcccgggtcaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggttttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggttccctcattgctcgagcatcagggctactccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgctttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agatcgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggccaccaacaaggacgggtgcccgaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaagcaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggaatccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +cggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtattagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaagatttatggtaagatcaagaagaggcttctctggggctcggatttggcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagccgctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggccttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaggacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagttattgcagagctaaaagaaggtggtacggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagacctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtgattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatcccatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctaccacta +taatcagtcaaatgat---cctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaggatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcctaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgtttacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaagttccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggttcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgcttttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcggg +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaacaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtcccccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaaggc-a-------- +---a-a-a-t-tgat-----ta-----t------ctttt----------c-ct----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>AB447427.1/1-7511 |Norovirus Hu/GII-4/Hokkaido1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgtt------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactacggatgattccaaattaaagaaggtagccaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacgtaataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggatttaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattattactactaatctggccaacccagcaccactggactacgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +caactcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +ctctcaagaatatctcaatcaagaagtgccagattgtatatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacatagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacgtcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcctgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +acagttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagccacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggacgaattcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaattaacgagggtcttccttctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaggtcacaaacttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggctgcactccacggcccaacattctacagtaaaatc +agcaaattagtcatcgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctactattaaattgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgactttatattttt +ggtaccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacggaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaggctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgccgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccactcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447428.1/1-7511 |Norovirus Hu/GII-4/Hokkaido2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaagccaatacggccttcagtgtccctccactcaatcagagggagaacagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgttatgccttttgttgttgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttaatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaaaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaataatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagaaga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaatccagaagacttcaagcccaaggggaaattatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccgctcccacctggcacctatgaaccagcctaccttggtggcagggacccc +agagtcaagggtggtccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacgggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaaacattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagtgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tcattctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggcgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +cgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcagcgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttctccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gagtcaatcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447429.1/1-7511 |Norovirus Hu/GII-4/Hokkaido3/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgctgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggtatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatggttgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatctcggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaaaactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agaccggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagggaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggcttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtttccc-ccagcctgttcataacatcaacccacgtcataccccagggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctgatggatgaactcaaagcacactgtgtcacactccctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggcccaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggtcatggctttggagcccgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccatccctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgcc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggagatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447430.1/1-7511 |Norovirus Hu/GII-4/Hokkaido4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaatgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacaggtaccactatgatgctgattac +t-ctcggtgggactcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcaaaagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccactcaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctattgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447431.1/1-7511 |Norovirus Hu/GII-4/Hokkaido5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacccgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaactgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattttgagttacaaggacctgaggaccttgtggtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctgacaaccta +tatgagaacccttgacctcgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaataggaaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgagagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtatga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaaaatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaggacgcaaaggagttcttt +ggagtccccatcaaacaaatacaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaattatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgtcatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccaggatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taaccagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggatgacgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaagcttcataa +atcaggctatgttacagtggcttacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctc---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccttaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggctactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgagggtca +aaacagaaatttgtcacctttcatga---ggggggctcacgacatatcgttcgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447432.1/1-7502 |Norovirus Hu/GII-4/Aomori1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagctt-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagccttgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttttggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtctggtgctaggattcaccaaggagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatggactagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcaccgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaaatggctaagagaatcgcggcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacgag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcgatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatcagacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggagttggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgataggagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggacattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagtgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacaacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgattcctttacccgatgttaggaataatttctatcacta +caatcaatcaaacgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagt------cacaatgtgcacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaagttg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttggggctgc------------------------------ +------------------------------tgtccccgcccggggctcctct------------------ag +tacgcctt-----------ctaac------------tctt---------ctt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcctacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447433.1/1-7502 |Norovirus Hu/GII-4/Aomori2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagctt-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagccttgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcgtggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagatataatagggaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttttggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtctggtgctaggattcaccaaggagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatggactagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaaatctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcaccgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaaatggctaagagaatcgcggcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ttcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgctttcagttctgatttctcacacataaaactaa +cattggccccacagggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacgag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgatg +gcaagggcgatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatcagacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggagttggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgataggagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctagaatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggacattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +catatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagtgtggtggacgtgggcgatttc +acaatatcaatcaacgagggtcttccctctggagtgccctgcacctcccaatggaactccatcgcccattgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacaacaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactagagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatccttgcggggaacgcgttcaccgc---cggaaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgattcctttacccgatgttaggaataatttctatcacta +caatcaatcaaacgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggtaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagt------cacaatgtgcacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttttgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaagttg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttggggctgc------------------------------ +------------------------------tgtccccgcccggggctcctct------------------ag +tacgcctt-----------ctaac------------tctt---------ctt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcctacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447434.1/1-7511 |Norovirus Hu/GII-4/Aomori4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgac---cccaccatcaaattgatagcaatgttgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447435.1/1-7511 |Norovirus Hu/GII-4/Aomori5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccctgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtacttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgtgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagttaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagtggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaacccaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447436.1/1-7511 |Norovirus Hu/GII-4/Akita1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agacggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagatagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtacaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcaaagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------agctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaag +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagtatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgcgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggcgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaagtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgttaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctagggactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaacgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctact------------gcttctactgctgctt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gcg--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttatcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447437.1/1-7511 |Norovirus Hu/GII-4/Akita2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatttaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactcttaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttggtaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttttcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccgacaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctcgcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggttactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---tttcccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgaatgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaaatcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggacttc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaaa------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447438.1/1-7511 |Norovirus Hu/GII-4/Akita4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctagcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcagctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagagagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccactcaggggggtgagggggaagctacacttgagggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggaacagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +aggtggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctttaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447439.1/1-7511 |Norovirus Hu/GII-4/Akita5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatttacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacgttctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtactcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447440.1/1-7511 |Norovirus Hu/GII-4/Miyagi2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacccactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggacgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctacaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagaggttggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatttacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgagttagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggtcagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcggggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447441.1/1-7511 |Norovirus Hu/GII-4/Miyagi4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgtaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctagggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactttccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtaagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactttgaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactagactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctgccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaaaatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggggtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcataaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgct +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggcggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacatctagcggccatccacac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaggatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagcttaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaggtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgc-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactccctcaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +gtcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaatgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggatcagtcccagggctcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447442.1/1-7511 |Norovirus Hu/GII-4/Miyagi5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaagcgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgccaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagccgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagagattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacctct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaagaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcgggcagaccagggatagggaagacccaccttgctag +ggaagtggctaaaagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcattattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccagcctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacggtaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +catctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaacatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcataatcaagcgtgtga------acattcaagacttgtggt +ccaagccacaagtggaaaacacagagga--------tgctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaagactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatt +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatgggaacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacgtactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagcacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttt +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ct---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagtaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaatcaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatttacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagctgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447443.1/1-7511 |Norovirus Hu/GII-4/Toyama1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacacccctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttctgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaagcccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgccgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtacaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctaactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgtttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgctttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagcggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaggacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaaccgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaagaggaggccaagatccggcaaa +ggatctttagaccaacaaggaaacaacgcaaggaagaaagagtttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggactcatgcaaccatgaaaatccaagggcgc +gctgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaactatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccccgacaaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaacttccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgacacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaacccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctatacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggggctttctttgctggattggcatctgatgtcctcggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcctttcaacatgataaagagatgcttcaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggattggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447444.1/1-7511 |Norovirus Hu/GII-4/Toyama4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatataccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +taggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacatccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacacaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcgtagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgacggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447445.1/1-7511 |Norovirus Hu/GII-4/Toyama5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatataccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaattaacaccactctccttgttctg +gaggcctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagggttcagagcacatccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtaa------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----aatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccacgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacacaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggctcctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttttatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcgtagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaatcaatgatcccacactct +caaagacccatacaattgatgtccttacttggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcagcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgacggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcactcaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaataattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataatagaaaattg +cagcaagcttccttccagtttagcagtaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447446.1/1-7511 |Norovirus Hu/GII-4/Aichi3/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctgat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447447.1/1-7511 |Norovirus Hu/GII-4/Aichi4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +gga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcttcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataatagggaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatctaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataagattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +acgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgttcagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacgaggacgggtgcccaaagcccaaa-- +-gat----aatgagg---agttcgtcatttcgtctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaaggaacccagaagacttcaagcctaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgaaaaactcagctttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaaggatggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcctaggggt +aagccaccaaagccaagcgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaagatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggtctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacagcagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtagcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaatgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatacgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agtaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtggatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagttctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaaattgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcagttcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------caaaatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaactccataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggttatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaacggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttagctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccctatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacgtacaatgcaggccgtttttccgcccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctccccc------------------ag +cacatctt-----------ctgat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447448.1/1-7511 |Norovirus Hu/GII-4/Sakai2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcacaaacagcct-cccccgagggaaacaccacaa +aga---------------------cctccacgaccacccaccccggaacttgcc-------aaaaagatccc +tcc-----------------------------tcccccacccaacgg------ggaggatgaactagtggtt +tcttacagcg----------ccaa---agatggcgtttccggtttgcctgagcttaccactgtccggcagcc +ggatgaaaccaacacggcgttcagtgttcccccactcaaccagagggagaatagggacgccaaggagccgct +aaccggaacaatcctggaaatgtgggacggggagatctatcattacggtctgtatgtggaacgaggccttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggttgagctagcaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctctccagacactctcaggagactgcatggagagtcgtt +cccctacacagcctttgacaacaactgctatgccttctgctgttgggtcctggacctaaacgactcgtggtt +gtg---caggaggatgatccagaggacaactggtttcttcagaccttaccaagactggaacaggaaacccct +ccccaccatggatgactccaaactgaagaaggtggccaacatattcttgtgtgcgctatcttcactattcac +taggcccatcaaagacataataggaaaggtgagaccgcttaacatccttaacatcttggcctcatgtgattg +gacttttgcaggcatagtggaatctttgatcctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactaggtgactacgaactgcaggggcccgaggaccttgcagtgga +actcgttccagtagtgatgggggggattggtttggtgctaggattcaccaaagagaagatcggaaaaatgtt +gtcatctgctgcatccaccttaagggcttgtaaagaccttggtgcatacggactggaaatcctaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagttggctatggtgaggtccatcgaggatgcggt +gctggacctcgaagcaattgagaacaatcacatgactgccctcctcaaagacaaagacagcttggcaaccta +tatgagaacccttgacctcgaggaggagaaggccaggaagctttcgaccaagtctgcttcacctgacatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggaact +ctccagcagaccaagacctgttgttgttatgatatcaggcaggccagggatagggaaaactcaccttgctag +ggaactggccaagaaaatcgcagcttcgcttacaggggaccagcgtgtgggtctcatccctcgcaatggcgt +tgaccactgggatgcatataagggggaaagagtcgtcctatgggacgattatggaatgagtaatcccatcca +cgacgccctcaggttacaggaacttgctgacacctgccccctcacgctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccattggactatgt +caactttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtacgcagaagcccctgaggtcgagaaggcaa +agcgtgatttcccaggtcaacctgacatgtggaagaacgcattcagttctgacttctcgcacataaaactga +cgctggctccgcaaggtggcttcgacaagaacggaaacaccccacacgggaaaggcgtcatgaaaaccctca +ccactggttctctcatcgcccgagcatcagggctactccatgagaggttagatgagtatgagctgcagggcc +caacccctaccacctttaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgccgaaaacaagt +acgggttgttggacacaatgagagttggaaaacagctcaaggatgtcaagaccatgccagagctcaaacaag +cgctcaaagatgtcgcaatcaagaattgtcagatagtgtatggtggctgcacttacaggcttgagtctgatg +gcaagggtgatgtgaaagttgacagagttcagagcgccactgtacagaccaacaatgagcttgtcggcgccc +tacatcatcttaggtgtgccagaatcagatattatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggagctgcatttgtaaccacgcgcattgtcaagcgcatga------acatacaagacctctggt +ccaagccacaggtggaggacacagagga--------gactgctagcaatgatgggtgcccaaaacctaag-- +-gat----gacgacg---agttcgtggtctcatccgatgacatcaaaaccgagggcaagaaagggaagaaca +agtctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaaggaacggcaaatactccatagaggaataccttcaggacagagataagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccgacaaa +ggattttcaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggctctgaaa +tcaggaagaggaacccagacgacttcaagcctaaaggaaagctgtgggctgatgatgacaggagtgttgact +acaatgagagactcaattttgaagccccaccaagcatctggtcgaggatagtcaattttggttcgggttggg +gcttttgggtttccc-ccagcctgttcataacatcaactcatgtgataccccagggcgcacaggagttcttt +ggtgttcccatcaaacaaattcagatacacaaatcgggtgaattctgtcgtttgaggtttccaaaaccaatc +agaactgacgtgacaggcatgatcttagaagaaggtgcacccgaagggaccgtggtcacactactcattaag +aggccaactggagaactcatgcccttggcagccagaatgggaacccatgcaaccatgaagattcaagggcgc +actgttggaggtcaaatgggcatgctcctaacaggatccaacgccaagagtatggacctgggcaccacacca +ggtgactgtggttgtccctacatttacaagagggggaatgactatgtagtcattggagtccacacagctgcc +gcccgtggaggaaacactgtcatatgtgccacccaagggagcgagggagaagccacacttgaaggcggtgac +agcaaggggacctactgcggtgcaccaatcttaggtccaggaagtgccccgaagctcagcaccaagactaaa +ttctggagatcatccacggcaccactcccacctggtacctatgagccagcctacctcggcggcaaggacccc +agagttaagggtggcccttcattgcaacaagttatgagggaccagctgaaaccattcactgaacccaggggt +aaaccaccaaaaccaagtgtgttagaagctgccaagaaaaccatcgtcaatgtccttgaacaaacaattgat +ccacctcaaaaatggtcatttgcgcaggcatgcgcatcccttgacaagaccacttccagtggtcacccgcac +cacatgcggaaaaacgactgctggaacggggaatcctttacaggcaaattggcagaccaggcttccaaggcc +aacctgatgttcgaggagggaaagaacatgactccagtctacacgggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggcttctctggggttcggacctggcgaccatgatccggtgc +gctcgagcatttgggggcctgatggaggaactcaaagcacattgtgtcacactacctgtcagagtgggtatg +aatatgaatgaggatggtcctatcatctttgagagacactctagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcggctttagaaatcatgg-tcaagttctccc +cagagccgcatct-ggcccaaaaggttgcagaagaccttctttctcccagcgtgatggacgtgggtgatttc +aaaatatcaatcaatgagggtctcccctccggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctatgtgcactctctgaggttacaaacctgtcccctgacattatccaggccaactctctcttt +tctttctacggtgatgatgaaattgtgagcacagacataaaattggacccagaaaagctgacagcaaaactc +aaggaatacgggttaaaaccgacccgccctgacaagactgagggaccccttgtcatctctgaagacctgaat +ggcctaaccttcctgcggagaaccgtgacccgcgacccagcaggctggtttggaaagttggaacagagttca +atactcagacaaatgtattggactagaggccccaaccatgaagacccatctgaaacaatgataccacactcc +cagaggcccatacaattgatgtctttgctgggtgaggctgcactccacggcccagcattctacagcaaaatc +agcaaactggtcattgcagagttgaaggaaggtggcatggatttttacgtgccaagacaagagccaatgttc +agatggatgagattctcggatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccatacctttctcacctggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaacaatttctaccatta +caatcaatcaaacgac---tccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatatttct +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---tttcccattcctttggaaaaattgttcacgggtcccagcagtgcctttgtcgtccaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtcccccgtcaacatctgcacctt +cagag-----------------------------------------gagatgtcacccaca----------- +-----------ttccagg------------------------------------------------ta---- +-------ctcgta----------------------------------cttacaga----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----cc-----acaaagggagacggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactgggagtgttgacttcactccaaagctgggcagcgttcagttcgcca---------ctgacacaga +caatgattt---tgaaactggccaaaacacaa---------------------------ggttcaccccag- +--------tcggtgtcatccaggatggtagtagtacccacagaaatgaaccccaacaatgggtactcccaga +ttactcaggtaga-actgct------cataatgtacacctggcccctgccgtagcccccacttttccgggtg +agcaacttcttttcttcagatctactatgcccg------gatgcagtgggta------tccca--------- +--atatggatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagccccatcaca +atctgacgtggctttgttgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +agcaggctatgtcacagtggctcacactggccagcatgatttggtcatcccccccaatggctactttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttcgaatttagcagcaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttacagcagggtatgatgaaaatcaaacaggcaatgctcctagagggt +ggattctctgaaacagatgcggcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagaaccacaacatacaatgcaggccgtttttccacccct--------- +ca---------------------accttcgggggcatt---------------------------------g +ccaggaa----------------gaactaatcccagggctac------------------------------ +------------------------------tgtacccgctcggggctccccc------------------ag +cacacttt-----------ctaat------------acttccactcttactt-------------------- +----------ctgcct-----attcagatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacgtatcgttcgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcgaccgtgcccaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447449.1/1-7511 |Norovirus Hu/GII-4/Sakai3/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactgatc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggagtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaactaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +tatgagaacccttgacttcgaggaagagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaacttcggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccattcacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggtcatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaactgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggacctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcacta +taatcagtcaaatgat---tctaccatcaaattgatagcaatgttgtatacgccacttagggctaataatgc +tggggaagatgttttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------cccgtg----------------------------------actacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgtacaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtgcacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatctggattgcctactcccccaggagtgggtgcagcacttctaccaggaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcatttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggagcact---------------------------------g +ccaggaa----------------gaatcaatctcaggattcc------------------------------ +------------------------------cacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----atttaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447450.1/1-7511 |Norovirus Hu/GII-4/Sakai4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +gaccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttattctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaattaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggttgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagatcgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctgaggtgcgccaggatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaagcttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447451.1/1-7511 |Norovirus Hu/GII-4/Hiroshima1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcctgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcattccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgttttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447452.1/1-7511 |Norovirus Hu/GII-4/Hiroshima2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctacgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaggaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaactccttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctaatgagatttgtgaatccagacacgggtagagtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctgatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgt---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447453.1/1-7511 |Norovirus Hu/GII-4/Ehime1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcctaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaaccagagggagaatagagatgctaaggaaccact +ggccggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +tccctacacagcctttgacaataattgctatgccttttgctgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagactggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaaaacccaccttgctag +ggaagtggctaagagaattgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttaattctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatagacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaaggatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctgaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtacgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ctagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggcgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcctgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagtcgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagtcacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagctgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgacaaaaccgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggaggactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaaacaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaactgatagcaatgctgtatacaccacttagggccaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccgtcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcagccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccaccatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctttattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcctcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +cacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcaccttacatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447454.1/1-7511 |Norovirus Hu/GII-4/Ehime2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaaaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacttaataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccactttgctcaaagacaaagacagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +catctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcataatcaagcgtgtga------acatccaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagttaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggcggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcagatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctctctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcaccctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttggat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaggatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactaggagaggccgcactccacggcccaaccttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaacccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaaagttgattttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggactcc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgt---------------------------------------gaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447455.1/1-7511 |Norovirus Hu/GII-4/Ehime5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------ccccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggagatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccatcagtctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaagcatt +tccctacacagccttcgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaggatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaaccctcgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagttttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggttgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcatcatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggacgagtttgaactacagggcc +catctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaacgtggaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcataatcaagcgtgtta------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtggctggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacgcca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcattaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacctctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgataaaatttatggtaagatcaagaagaggcttctctggggctcagatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactaggagaggccgcactccacggcccaaccttctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggagcctgtgttgatccccttacctgatgttaggaataacttctatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcgca----------------------------------attacaca----------------- +----------------atgaatttggcttctctaagttggaacaattacgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggggatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactggaagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------agttcaccccag- +--------tcggtgtcatccaggatggtggcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctaatgagatttgtgaatccagacacgggtagagtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaacaacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaaccccaggacttc------------------------------ +------------------------------tacccccgctcgaggctcctcc------------------ag +catatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtctcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgt---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447456.2/1-7559 |Norovirus Hu/GII-4/Saga1/2006/JP genomic RNA, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----cccttggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttgcaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgagctggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccctctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctctcacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggcctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaagtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcaggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaactca------aactgtttcaac----------ggg--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaggcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta------------cctcc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AB447457.1/1-7511 |Norovirus Hu/GII-4/Saga4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----cccttggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcatttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaagcacagagga--------ggctaccaacaaggatgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggactgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tgcatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447458.1/1-7511 |Norovirus Hu/GII-4/Saga5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacaacct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttccaccgtcaggcaacc +ggaagaatctaacacggcctttagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactgggacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcccc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgttatgccttttgttgctgggtcctggacctaaatgactcatggct +gag---caggagaatgatccagagaacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtagctaacttatttctgtgtgctctgtcttcgctattcac +caggcccataaaagatataataggaaagctaaggcctcttaacatcctcaacatcttagcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagctacaaggacctgaggaccttgcagtgga +gctcgtccccgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattgggaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaattggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +tatgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgctctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccacctcgctag +ggaaatggctaaaagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccactgggatgcgtacaagggggagagggtcgtcctatgggacgattatgggatgagcaatcccattca +cgatgccctcaggttgcaagaactcgccgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaggcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggccccacagggtggctttgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgaactacagggcc +caactctcactaccttcaatttcgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgagggttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacatacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcaccatttgaggtgcgccaggatcagatactatgtcaagtgtgtccaggaggccctgtattccatcatcc +aaattgctggggctgcgtttgtcaccacacgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaccaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagaataccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgactgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagtgtggact +ataatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggctcaggctggg +gattctgggtctccc-ccagtctgttcataacatcgacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacaggcatgatcttagaagaaggcgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaagatccaagggcgc +accgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaagcatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaagggtacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacggcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggcccttcactgcagcaagtcatgagggaacagttgaagccattcacagagcccaggggc +aagccaccgaagccaagtgtgttagacgctgccaagaagaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctagcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgctcaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcgacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcggaagaccttctttctcctagcgtggtggacgtgggcgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgataccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagatataaaattggacccagagaaattgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgctcttcacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaacgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccttacctttcccatttggccagaatgtacaa +tagttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cggaaagatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccctttgcccgatgttaggaataatttctatcacta +caatcaatcaaatgac---cccaccatcaaattgatagcaatgttgtacacaccacttagggctaataatgc +tggggacgatgtcttcacagtttcttgtcgggttctcacgagaccatcccccgattttgatttcatattttt +agtgccacccacagttgagtcaagaactaaaccattctctgtcccagttttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgtttacgggtcccagcagtgcctttgttgttcaaccaca +gaatggcaggtgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgctgg------------------------------------------------ta---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattatgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggcaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgattt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggtggtaccacccaccaaaatgaaccccaacaatgggtactcccaaa +ttattcaggtaga-gatagt------cacaatgtgcacctagcccctgccgtggccccctcttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgtctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctgtttgagtgtaagcttcataa +atcaggctatgtcacagtggctcacactggccaacatgatttagttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtcctcggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaatcaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcggg +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggga----------------ggaccaatcttagggctgc------------------------------ +------------------------------tgtccccgcctggggctcctct------------------ag +tacacctt-----------ctaac------------tcttccactgccactt-------------------- +----------ctgtgc-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------cacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggaccaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaatatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447459.1/1-7511 |Norovirus Hu/GII-4/Kumamoto1/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgca------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaaatagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttactcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttattttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcattccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgttttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447460.1/1-7511 |Norovirus Hu/GII-4/Kumamoto2/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcataaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcgccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggttagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgttcaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagaaccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaacaattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgtttaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttagacaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacagttatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aacgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcattccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcattccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgttttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgcctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaatagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447461.1/1-7511 |Norovirus Hu/GII-4/Kumamoto3/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaagccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---tagaagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtagagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcgattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgcgtaa------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccgaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaagagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggaccct +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagcagccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggcatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaggatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtggcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggttattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctgggctt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcgct---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447462.1/1-7511 |Norovirus Hu/GII-4/Kumamoto4/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttactcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcattccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgttttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>AB447463.1/1-7511 |Norovirus Hu/GII-4/Kumamoto5/2006/JP genomic RNA, complete genome +------gaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcgtttccggtttacctgagctttccaccgtcaggcaacc +ggaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtatctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggtaaatgaactggctatggtgagatccatcgaggatgcagt +actggaccttgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgatatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagattgtgtatagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgcaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +aggctggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaggagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcaaggatagtcaactttggctcaggttggg +gtttttgggtctccc-ccagcctgttcataacatcaacccacgtcataccccaaggtgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggtatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacttgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aatctgatgtttgaagaagggaaaaacatgaccccagtctacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtctccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaattagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +cagagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggctttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagtcccagccaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataatttttatcacta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaactaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcaccacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaattggaacaattatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtttactcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacagt +ttacactgggagtgccccctttactccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgtcatccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttattcaggtaga-aatgtt------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgatttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgcaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacagcaggcttcattccaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaaatcaaacaggcgatgctcttagaaggt +gggttctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaaccaatcccaggactcc------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgttttaac----------gag--------ac +ttggttc--------tacagctggttctggtaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaggcgaggggagtcacg--------ggtgtaa-------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>EF202567.1/1-7295 |Norovirus Hu/GII/Toronto/SK/2002/CAN nonstructural polyprotein gene, partial cds; capsid protein gene, complete cds; and unknown gene +------------------------------------------------------------------------ +------------------------------------------------------------------------ +-------------------------------------gtctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctctccaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaacagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggaccgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggctttttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcttatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaatgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtggtcttgatgatatcaggtagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaagctgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaaaggaacatactgtggtgcaccaatcttaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgagccagcttatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcacacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatctttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacggacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccccgatctgaatccctacctttctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaagtcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +agtagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtactcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggagatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccaaaatgaacctcaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccta--------- +--acatgaatttggattgtctactcccccaagaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------g +ccaggaa----------------gaaccaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggcttctcc------------------aa +tgcacctt-----------ctaac------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aagaactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aagggacagcagtctcaaccgtgcccaa +aa---------------------------------------------------------------------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>EF202568.1/1-7360 |Norovirus Hu/GII/Toronto/SK/2005/CAN nonstructural polyprotein gene, partial cds; capsid protein gene, complete cds; and unknown gene +----------------------------------cttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaacatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtatttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactaacaccactctccctgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagactggaataggaaacccct +ccccactatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggcttcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcggcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacaaggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtacataatggttgtacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgctagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gacgagg---agttcgtcatttcatccgatgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggcctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaagctgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +ggttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaaggacgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggctgcccctacatctacaagagaggaaatgactatgtagtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcgccaatcctaggtccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcactgcagcaagtcatgagggatcagctgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtctttcacaggcaagctggcagaccaagcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctttggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaggctaactccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcgaagaactgtgacccgcgacccagctggttggtttggaaaattggatcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgattcccttgcctgatgttaggaacaatttctatcatta +caatcaatcaaatgac---cccaccatcaaactgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcccagcagttcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcccgtcaacatctgtacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaaccccagattttgtaggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcataaagccacagt +gagcactggaagtgtccactttactccaaagctgggcagtgttcaattctcca---------ctgatacaag +caatgactt---tgaaaccggccaaaacacga---------------------------ggttcaccccag- +--------tcggtgtcgtccaggatggtagtaccaccccccaaaatgaaccccaacagtgggtgctcccaga +ctattcaggtaga-gatagt------cacaatgtacacctagcccctgctgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atctgatgtggcactactgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagcttcataa +atcaggctatgtaacagtggcccacactggccaacatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctctaatcaatgctgg---ggctggggccatcaaccaaaaaattgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtattgggctcccgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatc---------------------------------g +ccaggaa----------------gaactaatctcagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcaagccccccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>EU424333.1/1-7420 |Norovirus Hu/GII/Leverkusen267/2005/DE nonstructural polyprotein and capsid protein genes, complete cds; and minor structural protein gene, partial cds +----gtgaatgaagat---ggcgtctaac-gacgctaccactgcccttggcagccaa---accgctaccaat +g------ac----agcgtaaatgcaccaccccctcaaaaagaggaagt------gagtgtattatccaacgt +aaaagttgggtttaagaaga----tgttgggggctgtaccgaaaactcca-------------aaacaacga +gaaaaacc----------------ggtgcagccccccacagtgagcattaatggtgtggaagttgaagtgcc +acc-----------------------------cccccccccaaatgg------tgaggat------gtggtc +tactacaaca----------gtaaaaacgacaccgttgagggcttgcctgacctgaccacagt---ccagaa +tgaacatgaacattccccctacacggtgccccctctaagtgaaagagaacacaaacccgcaatggaaccatt +accaggcaccatacttgaaatgtgggatggtgagttttaccattattccatatacgtcaacaacggcaaggc +gcttggcgtgcacaaaccacccgctgctataagcgttgccaccattgagttgactcccatatcattatattg +gaggccagtgtacactccac---cgtacctagtgcatcctgacacccttaagggtctcgctggagagaagtt +cccgtacacggcattcagtaacaattgttacaacttctgttgctgggttctggacctgaatgactcgtggtt +gag---taggaagtccatatccagaacaactggtttctataagccatatcaatcatggaataggaaacccct +ccccacagttgatgatggaaaaatcaagaaagtggccaatgcagtgttgtgtgctcttggatcattgttctc +gaaacccattaaagacctgcttggaaagttgaaaccccttaacctgctcaatttattggcatcatgtgactg +gacattcgctgggatagtggagacggtcatcctggcagcagagttattc---aatgtgttttggactccccc +tgatgtgtccaatttcatagcctctttgattggggactttgaaatgcaagggccggaagatctcgccgtgga +acttgtgcccgtagtgatgggagggattggaatggttctgggtttcaccgcagaaaagatagggcgcatgct +ttcttcggctgcctccactttaagggcttgcaaagacctagggaactacgccctagatatactcaagctggt +tatgaagtggttcttccccaagaaggaggagaaggccgagatggaaaccctgagagctatagaagatgcggt +tcttgacatggaagcaataggcaacaaccacttgactacactgctcaaagacaaagacagcctaaccgccta +catgaagaccctggacttggaagaagagaaggcacgaaagctttcgacaaaatcatcatcaccagacattgt +gggcacaataaacgcgatcttggccagaatcgcggctgctagatcactccttcacaaagctaaggaagaaat +gttcagcaggattagacctgttgtagtgatgatctctggaagacccggcataggaaaaacccacatggcgag +gcaattggctaaaacaattgccggtacgatggcaggagaccagagagttggacttgtcccccgcaatggggt +tgaccactgggatgcctacagaggagagagagtggtcctgtgggacgactatggtatggggaacacaatcaa +ggatgccctcaccctgcaagaactggcggatacgtgccccgtcactctcaattgtgacaggattgagaacaa +agggaaaatgttcgacagcgatgtcatcataataaccactaacctggccaacccagcacctctcgactacgt +caacttcgaggcctg-ctgcaggagaattgacttcctagtctatgctgaagctccagaaatagaaaaagtga +agaaagacttcccaggacaaccggacatgtggcgcgaccacttcaaaccagactcatcccacattagactgt +ccctggcccctcaaggtgggtttgataagaacggaaacaccccacacggaaaagggacgatgaagactctca +cccagggctcccttactgctcgtgtagctggcctagtgcacgagaggagggacgagttccagtttcaagggg +atgaggtgcaactttacaactttgatgccaacagagtgtctgcgtttaggaagctagcagctgacaacaaat +acagtctcatggaaactatgaaggttggttctgctctcaagaatgtcaaaaccctagaagacctaaaggtcg +cactcaggaccgtgaaattcaaggagtgcgaaataatatacaaagggtcaaagtaccgtgtctcatctgatg +gatgtgggaatgtctcagtcaccaaagtgaaagacatgatgtcacagaccaccaatgaggtccactcagcct +tgattagattgagacaagcccgggctaggtactacattagctgcttccaagacctgatttacacccttatcc +aggtcgccggtgcttcctttgttgtgc---------------acagaa------tatcaaggagattctcat +gggaacggtggatcaaaccctctgaggcc---------cttcctgaggatggccaaatcagt-----ccaac +agacagtgctgaa-a---agtgggaagtcgagccgaaagatgccgacccagaaggcaagaaaggtaagaata +agaaaggtagaggcaggaagcacacagccttctctagcaagggtctcagtgatgaagagtatgatgaattca +aaagagtgagggaagaaaggggtggaaagtacaccattgaggaatatctccaagacagagaccgtttt---t +atgaagaggtggcagtagctcgtgccactgaagaggacttctgtgaggaagaaattgccaagatcagacagc +gggtctttagacccaccaagaagcaaaggaaagaagagcgcagtgtccttggccttgtgactgggtctgaaa +tcaggaaaagaaaaccagatgacttccaaccaaagggcaacctctgggctgatgacacaagaagtgtagatt +acaatgagaggctagactttgaggccccacctagtgtctggtcacgtatagttcctctgggcactggctggg +gcttctgggtctcat-caaatctactcataaccaccactcatgtactaccaaaaggtgttagagagctattt +ggtgttgatataaaacaagttcaaatacacaagtcaggtgaattttgcagattcagatttccccgaccaatc +aggccagatgtgaccgggttgatcctagaagaaggggcgcccgaaggcacagtgtgttcaatcctagtaaag +cgacccacaggggagatgatccccctcgctgttagaatggggacacacgcttccatgaagatacaaggcaga +acagttggtggacagatgggcatgcttctcaccggagcgaacgccaagaacatggacttgggaaccatacca +ggcgattgtggctgtccatatatttacaaaaggggcaatgatattgtagtagctggagtccacactgctgct +gcaagaggagggaacactgtcatctgtgccacacaaggacctgatggagaggccgttctggaaggaggagat +gacaaaggaacatactgtggtgcgccaatactcagtgttggcaaggcccctaaattgagcacaaaaacaaaa +ttctggcgatcatccccagaggcattgccaccaggaacgtacgaacctgcctacctaggtggcaaagacccc +agggttgaaaaagggccttcactccatcaggtcatgagagatcaattgaagcccttcaccgagcccaggggg +aagccgccaaaccccactgtacttgaagaagccaaaaagaccgtcatgaatgttcttgaacaaaccatagac +cctgcaaaaccttggacctatgcccaagcctgcgcctctctcgataaaaccacctccagtggcagtccccac +cacctgaagaagaacgaccactggaatggagactctttcacaggacccttggctgatcaagcctctaaagct +aacctgatgtatgaacaggcgaaacacgtcagtcctgtttatacggcagccctcaaggatgaactagtcaaa +acagacaagatctacaaaaagattaagaagagactgttgtggggatctgatctgggcactatggtcagatgt +gctagggcctttgggggtctccttgacagtatgaaagagagctgtgtggctttaccttgtagagttggtatg +aatatgaatgaagatggccccattatatttgacaagcattcaaaatacagattccactatgatgctgactac +t-ccaggtgggattcaacacagcaaagatgcatcctggccgcagcaatggaggtcatgg-ttaagttctcag +ctgaacccgagct-ggcccaggtggttgcagaagacttgctagcccctagtcagctcgacgttggggatttt +gtgatctctgtgcaggagggccttccttctggtgttccttgcacctcacagtggaattcaatagcgcactgg +atcattaccctaagcgctatggcagaagtgtccggtctttccccagaagtcatacaggccaactcatgcttt +tctttctacggggatgacgagatagtgagcactgatattaacttagacccagccaaactgactcagaaattg +agagaatatgggttagtgcccaccagaccagacaagacagaaggccccttagtcatcactgaaaacttgcat +ggactaacatttctgcgaagaactgttacccgtgacccagcaggttggtttggaaaactggatcaagactca +atcctaaggcagctctactggacaagaggcccaaaccatgagaacccctacgaaagcatggtcccccattca +caacgtgccactcagctcatggccctcttaggggaggcctctctccatggaccccaattctacaagaaagtc +agcaagatggttatcagtgagataaaaagtggtggtctggagttttatgtgcccagacaagaggctatgttc +agatggatgagattttcagacctcagcacatgggagggcgatcgcaatctggctcccgatggtgtgaatgaa +gatggcgtcgaatgacgctagtccgtccag---tgacggatcagccaacctcgtcccagagatcaataatga +ggtgatggctcttgaaccagtggctggtgctgctattgctgccccggttgctgggcaacagaatataataga +tccctggattagaaataactttgtgcaggcccctggtggcgagttcactgtttcaccaagaaacgccccggg +ggaagtacttctaaatttacctctaagccctgatatcaatccatatttggcccatttgtcccgaatgtacaa +tggttatgctggaggcgtggaggtggaggtggtcctcgccgggaatgcgttcacggc---gggaaaaatcat +ctttgccgcagtgccacccaattttcctcctgagaaccttagtccaagtcaaataacaatgctcccccatat +catagttgatgtcaggcaattggaaccagtgcgcatacctttaccagatgtgcgcaacaatttctatcatta +ttctagagaaaatgac---tccacattgagattgattgcaatgttgtacactccccttagagctaataatgc +tggtgatgatgtgtttactgtctcttgtagggtgttgacaaggccttctcctgattttgatttcatattcct +ggtgccacccacagttgaatctaaatctaaacccttcactatcccaatactcactattgaggaaatgaccaa +ttctagg---tttcctgccccgttagagatgatgaccacaggtccgagccacgacattgttgtgcaaccaca +aaacgggcgctgcaccattgatggcgtgctgctcggcactacacagctgtccccagttaacatctgctccat +gaggg-----------------------------------------gtgttcctaccaagcgaa-------- +----------ccaatgggactg------acaat--------------------------------------- +------------------------------------------------------------------------ +----------tgctttgtgcaactcgagaacccaaacggttcagcttatgatccaacagaggacataccagc +agtcctggggtcacctgactttgtgggagagttctacgggacaatcacccaga---ggagcccaaa------ +-----------------------taattcaact--------aga-----------gcccaccctttcaccct +caacactggaagccctaggtacactcccaaaattggctcagtggacatccacg---------tcacagacgt +tgaagacct---caacgatcacgagccagtga---------------------------aactcactccag- +--------tcggtctctctgg---tagcagtg---------gttca---atccatcagtggcagctgccaaa +ttactcaggagtg-gcaacc------cacaatatgcacttggccccatctgtcgctccattgttccctggtg +agcagattcttttcttccggtccacagtccccg------ggtgtggtggtta------tccaa--------- +--acacaaacatcgactgtttgattcctcaagagtgggtccaacacttctaccaggaaggtgctccagcccg +tactgatgtggccctgctcagatttgtaaaccctgacacgggcagagtgctctttgagtgtaaattgcataa +gcatggctttattactgtggcttactctggaaaccatgatttggttatgcccccaaatggttattttagatt +tgagtcttgggtgaatcaatttcacactcttgcccccatgggaacaggttcgggcagaagg---------ag +aatcc---------agtaatggcaggagcatttctagcaaatctggccggtggcgtggcatcaaacgggatt +ggctctctgatcaacgcagg---tgccaacgctatcaatcaaaaagttgagtatgattttaataagcaa--- +------------------------------ctccagagcgcatcgttcgctcacgataaagagatgctccag +gcacaaattcaggcaacaagtcagctccaacgtgacatgatggccatcaagcaagaggtgttgaccgctggc +ggcttctctcacgctgatgcagccaggggcgcggttggagcgccaatgacaaagttgatcgactggagcggc +acaagatactgggccccaaattccatgaaaacaacaggctattctggaactttcaccagccaagctccccca +ca-----------gtttaccccctattcta------------------------------------------ +-----------------------agagtgcaggcaaacaatca----------------------------- +-----------------------------------ccctctggggcagtgtcgccc--------------tc +aatttctt-----------c---tgg------------ctcttctgtgagctctt----------------- +---------------------tgagaacaca---atcaacttccttgc------------------------ +------c----a---tctaat-------------cggactatgacaacacaat---------catcaggcct +ctcttc-------------------atcc--------tctcgatctaggacatcagattgggtgcgcagtca +aaacgagagaatgagcccattcatgg---acggggcactccatacagcttttgtgtcccccccatcgagtag +ggcttct---agtt------------------------------ctggca---cagtctcaaccgtgccaaa +ggaggttttgga-ctcctggactcctatgt------------ttaacactcacagacagccgctc------- +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +------------------------------------------------------------------------ +- +>EF187497.2/1-7559 |Norovirus Hu/GII.4/Kenepuru/NZ327/2006/NZL, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagtat +ggctgtcacttttaaacgag----ccctcggggcgcggcccaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaatattcc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgacctttctaccgtcaggcaacc +agaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actgggtgtgcataaaccaccagctgccattagcctcgctagggtcgagctagcaccactctccttgtactg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaatgactcgtggct +gag---caggagaatgatccagaggacaactggtttcttcaggccctaccaagattggaataggaaacccct +ccccactatggatgactccaaattaaagaaggtggctaacatattcctgtgtgctctgtcttcgctattcac +caggcccataaaggatataatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgattg +gacttttgcaggcatagtggagtccctgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactaggtgactacgtgctgcaaggacctgaggatcttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtactaggattcaccaaagagaagataggaaaaatgct +gtcatctgctgcatccaccttgagagcttgtaaagaccttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaggaggaagcaaatgaactggctatagtgagatctatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgaccttgaggaggagaaagctaggaaactctcaaccaagtctgcttcacctgacattgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtattgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcatcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaacggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgatgctctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggtcaacctgacatgtggaagaacgccttcagttctgatttctcacacataaaactat +cattggccccacaaggtggcttcgacaagaacgggaacaccccacacggaaggggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggttagatgaatttgagctacagggcc +caactctcgccaccttcaatttcgatcgcaataaagtgcttgccttcagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggagacagctcaaggatgtcagaaccatgccagaactcaaacaag +ctctcaagaatatctcaatcaagaagtgccagatagtgtatagtggttgcacctacgtacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggtgccc +tgcatcatttaaggtgcgccagaatcagatactatgttaagtgtatccaggaggccctgtattccatcatcc +aaattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gaacaccagcaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agtttgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaaaaagcacacagccttttcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +acgaggaggtggccattgccagggcgactgaggaagacttttgtgaagaggaggaggccaagatccggcaaa +gaatcttcagaccaacaaggaaacaacgcaaggaggaaagagcttctctcggtctagttacaggttctgaaa +ttaggaaaagaaacccagatgatttcaaacccaaggggaaactgtgggctgacgatgacagaagcgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ctagcctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgagttctgccgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtctactggggaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggccaaatgggcatgcttctgacaggatccaacgccaaaaacatggatctgggtactacacca +ggtgattgtggctgtccctacatctacaagagaggaaacgattatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aacaaggggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggaggtcgtccacagcatcactcccgcctggcacctatgaaccagcctatcttggtggcaaggaccct +agagtcaagggtggtccttcactgcagcaagttatgagggaacagttgaagccattcacagagcccaggggc +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcagacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgatccggtgt +gctcgggcattcggaggcctaatggacgaactcaaagcacactgtgtcacactccccattagagttggtatg +aacatgaatgaggatggccccatcatcttcgagaggcattccaggtatacatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtcccctgacaccatacaggccaattccctcttc +tctttctatggtgatgatgaaattgttagcacagacataaaattggacccagagaaattgacagcaaagctt +agggaatatgggttaaaaccaacccgccctgacaaaactgaaggaccccttgttatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggctccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctatcgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatttgaatccctacctttcccacttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---tggaaaaattgt +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacccgatgttaggaataatttctatcatta +caatcaatcaaatgac---cccaccatcaagttgatagcaatgttgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtttcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtaccattgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcctaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcaag----------------------------------aatacaca----------------- +----------------atgaatctggcctcccaaaactggaacaattacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagctacagt +gagcactggaagtgtcaacttcaccccaaagctgggcagaattcaattctcca---------ctgatacaag +caatgactt---tgaaactggccaaagcacga---------------------------gattcaccccag- +--------tcggtgttgtccaggatggcagtaccacccaccaaaatgaaccccaacaatgggtgctcccaga +ttattcaggtagg-gacagt------cataatgtacacctagcccctgccgtggccccttcttttccgggcg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagccccagcaca +atctgatgtggctctgctaagatttgtgaatccagatacaggtagggttctgtttgagtgtaagcttcataa +gtcaggctatgttacagtggctcacactggccagcatgatttggttatcccccccaatggctattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaacgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataatagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttacagcaggaaatgatgaaagttaaacaggctatgctcctagagggt +gggttctctgagacagatgcagcccgtggggctatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggagtacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------gaactaatcttagggctgc------------------------------ +------------------------------tgtccccgctcggggctcctct------------------aa +cacacctt-----------ctaat------------tcttctattgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtgccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaataggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgaa-----ta-----t------tcttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>EF684915.2/1-7560 |Norovirus Hu/GII.4/Shellharbour/NSW696T/2006/AUS, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgaca---------------aaatgttttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtggtt +tcttatagtg----------ccaa---agatggcatttccggtttacctgagctttccaccgtcagacaacc +agaagaaaccaatacggccttcagtgtccctccactcaatcagagggagaatagggatgctaaggaaccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgttgagcgaggtcttgt +gctgggtgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacatt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggatctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccctactacggatgattccaaattaaagaaggtagctaacatattcctgtgcaccctgtcttcgctattcac +caggcccataaaagacataataggaaagttaaggcctctcaacatcatcaacatcctggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagtcttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgatttcgagttacaaggacctgaggaccttgtagtgga +gctcgtccctgtagtaatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttagt +catgaagtggttcttcccgaagaaagaggaggcaaatgaactggctatggtgagatccatcgaggatgcagt +actggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagcctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgccgctgcacgctccctggtgcaccgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccagggatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggctgcaagaactcgctgacacttgccccctcactctaaattgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaatctggccaacccagcaccactggactatgt +caactttgaagcgtg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccccgaggtcgaaaaggcga +agcgtgacttcccgggccaacctgacatgtggaaaaacgcttttagttctgatttctcacacataaaattgg +cactggctccacaaggtggcttcgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctgctccatgagagattggatgagtttgaactacagggcc +cagctcttaccaccttcaactttgaccgcaacaaagtgcttgccttcaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcaaaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgtcagattgtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtacagaccaacaatgagctggctggcgccc +tgtaccatctaaggtgcgccagaatcaggtactatgtcaagtgtgtccaggaggccctgtattctatcatcc +agattgctggggctgcatttgtcaccacgcgcatcatcaagcgtgtga------acattcaagacttatggt +ccaagccacaagtagaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatctgacgacattaaaactgagggtaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagtaaaggtctcagtgatgaagagtatgatgagtaca +agagaattagagaggaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcagaccaacaaggaaacaacgcaaggaagaaagagcttctctcggtttaatcacaggttctgaaa +ttaggaaaagaaacccagaagacttcaagcccaaggggaaactatgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccgccaagcatctggtcaaggatagtcaattttggctcaggttggg +gcttctgggtctccc-ccagcctgttcataacatcaacccacgtcatacctcagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgactggcatgatcttggaagaaggtgcgcccgaaggcaccgtggccacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatccaacgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggggtgagggggaagctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagcgccccaaaacttagcaccaaaaccaaa +ttctggagatcatccacagcaccactcccacctggcacctatgaaccagcctaccttggtggcaaggacccc +agagtcaagggtggcccctcgttgcagcaagtcatgagggaccagctgaaaccgtttacagagcccaggggt +aaaccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgttcttgaacaaacaattgac +ccacctgagaagtggtcgttcgcacaagcttgcgcgtcccttgacaagaccacttctagcggccatccgcac +cacatgcggaaaaacgactgctggaacggggagtcctttacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtttacacaggtgcacttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcaaccatgatccggtgt +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgtcacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaagcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgctggcagctgctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcactctccgaagttacaaatttgtccccagacatcatacaggctaattctctcttc +tccttctatggtgatgatgaaattgttagtacagacataaaactagacccagagaagttgacagcaaagctt +aaggaatatgggttgaaaccaacccgccctgataaaactgaaggacctcttgttatttctgaagacttagat +ggtttgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactaggggccccaaccatgaagatccatctgaatcaatgattccacactct +caaagacccatacaattgatgtccttactgggagaggccgcactccacggcccaacattctacagtaaaatc +agcaaattagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgtcggtgccgctattgcggcgcctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttaggccctgatctgaatccctacctatctcatttggccagaatgtataa +tggttatgcaggtggttttgaagtgcaggtgatcctcgcggggaacgcgttcaccgc---cggaaaaattat +atttgcagcagtcccaccaaattttccaactgaaggcttgagccccagtcaggtcactatgttcccccacat +aatagtagatgttaggcaattggaacctgtgttgatccccttacctgatgttaggaataacttctatcatta +taatcagtcaaatgat---tctaccattaaattgatagcaatgctgtatacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccctgattttgactttatattttt +ggtgccacctacagttgagtcaagaaccaaaccatttactgtcccaatcttaactgttgaagaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttattcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------tt---- +-------ctcgta----------------------------------attacaca----------------- +----------------atgaatttggcttctctaaaatggaacaaatatgacccaacagaagaaattccagc +ccctctaggaactccagatttcgtgggaaagatccaaggtgtgctcactcaaa------------------- +-----cc-----acaaagggagatggctcgacc--------cgt-----------ggccataaagctacaat +ttacactgggagtgccccctttaccccaaagctgggcagtgttcaattcagta---------ctgatacaga +aaatgattt---tgaaactcaccaaaacacaa---------------------------aattcaccccag- +--------tcggtgttacccaggatggtagcaccacccaccgaaatgaaccccaacaatgggtgctcccaag +ttactcaggtaga-aatgtc------cataatgtacacctagcccctgctgtagcccccacttttccgggtg +aacaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatggatttggattgcctactcccccaggagtgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctattgagatttgtgaatccagacacgggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacaccggccagcatgacttggtcatcccccccaatggctattttaggtt +tgattcctgggttaatcaattctacacacttgcccccatgggaaatggaacggggcgtaga---------cg +tgctt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggctatcaaccaaaagattgattttgaaaataacagaaaattg +cagcaagcttccttccagtttagcagtaatctacaacaggcttcctttcaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacaggaaatgatgaaagtcaaacaggcaatgctcttagaaggt +ggattctctgaaacagatgcagctcgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggcccctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaatcaatcccagggctcc------------------------------ +------------------------------tacccccgctcgggtctcctcc------------------ag +tacatctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctatat-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccaatgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagttgggttgaggatca +aaacagaaatttgtcacctttcatga---ggggggctcacaacatatcgtttgtcaccccaccatctagcag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtagacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>EU310927.1/1-7559 |Norovirus Hu/Houston/TCH186/2002/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaaacagccc-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcctaacgg------agaggatgagatagtggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgagctttccaccgtcaggcaacc +ggaagaagctaatacggccttcagtgtccccccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaagccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacatggagaaacgtt +tccctacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactatggatgattccaaattaaagaaggtagctaacatattcctgtgtgccctgtcttcgctattcac +caggcccataaaagacataatagggaagctaaggcctcttaacatcctcaacatcttggcttcatgtgattg +gactttcgcaggcatagtggagtccttgatactcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagttgcaaggacctgaagaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtctggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagggcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gttggacctcgaggcaatcgaaaacaaccatatgaccaccttgctcaaggacaaagatagtctggcaaccta +catgagaacccttgacctcgaggaagagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttttggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtcttaatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtttttgacagcgatgtcatcattatcactactaatctagctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgtatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcttttagttctgatttctcacacataaaactga +cactggctccacagggtggctttgataagaacgggaacaccccacacgggaagggcgtcatgaagactctca +ctaccggctcccttattgcccgggcatcagggctactccatgagaggctagatgaatttgaactacagggcc +caactctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttgggaggcagctcaaggatgtcagaaccatgccagaacttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgatg +gcaagggcaatgtgaaagttgacagagttcagagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccacctaaggtgcgccagaatcaggtactatgtcaggtgtgttcaggaggccctgtattccatcatcc +agattgctggggccgcatttgtcaccacgcgcatcgtcaagcgtatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggctaccaacaaggacgggtgcccaaaacccaga-- +-gat----gatgagg---agttcgtcatttcgtccgacgacattaaaactgagggtaagaaagggaagaaca +agaccggccgtggcaagaaacacacagccttctcaagcaaaggtctcagtgatgaggagtacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaagaaacaacgcaaggaagaaagagcttctctcggtttggtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccacgtcataccccagggcgcaaaggaattcttt +ggagtccccatcaaacaaattcaggtacacaagtcaggcgaattctgtcgcttgagattcccgaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcatcaaa +aggtctactggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaatgccaaaagcatggatctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccactcaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatattgtggtgcgccaatcctaggcccagggagtgccccaaaacttagcaccaaaaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcgttgcagcaagtcatgagggatcagctgaaaccatttacagagcccaggggt +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgaacaaacaattgac +ccacctgagaaatggtcgttcgcacaagcttgcgcgtccctcgacaagaccacttctagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattagtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggttcggatttagcgaccatgatccggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacagataccactatgatgctgattac +t-ctcggtgggattcaacacaacagagagccgtgttggcagctgctctagaagtcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcgatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatttgtcccctgacatcatacaggctaattcccacttc +tccttttatggtgatgacgaaattgttagtacagacataaaattagacccagagaagttgacagcaaaactt +aaggaatatggattgaaaccaacccgccctgataagactgaaggacctcttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagctca +atactcaggcaaatgtactggactagaggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggagaggccgcactccacggcccaacattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggtatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagctttgtgaatgaa +gatggcgtcgagtgacgccagcccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcaattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagttcacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaattctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgattcccttacctgatgtcaggaataatttctatcacta +taatcagtcaaatgac---cccaccattaaactgatagcaatgctgtacacaccacttagggctaataatgc +tggggatgatgtcttcacagtctcttgccgagtcctcacgaggccatcccctgattttgattttatattttt +ggtgccacccacagttgagtcaagaaccaaaccattcaccgtcccaattttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcggtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgttaacatctgcacttt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ca---- +-------ctcatg----------------------------------attataca----------------- +----------------atgaatttggcttctcaaaattggaacaattacgacccaacagaagaaatcccagc +ccctctgggaactccagatttcgtgggaaagatccaaggcgtgctcactcaaa------------------- +-----cc-----acaaggggagatggctcgacc--------cgt-----------ggccacaaagccacagt +gagcactgggagtgtccactttactccaaagctgggcagtgttcaattcacca---------ctgacacaaa +caatgatct---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgtcgtccaggatggtaatagtgcccaccaaaatgaaccccaacaatgggtgctcccaaa +ttactcaggtaga-actggc------cataatgtacacctagcccctgccgtagcccccacttttccgggtg +agcaacttctcttcttcaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaagaggcagctccagcaca +atctgatgtggctctgctgagatttgtgaatccagacacaggtagggtcctgtttgagtgcaaacttcataa +atcaggctatgtcacagtggctcacactggcccgcatgatttggtcatcccccccaatggctacttcagatt +tgattcctgggttaaccaattctacacgcttgcccccatgggaaatggagcggggcgtaga---------cg +tgcgt---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggttccctaatcaatgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttcctttcaatttagcagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacaggcaatgctcttagagggt +ggattctctgaaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctttggattggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accttcgggggcact---------------------------------g +ccaggaa----------------gaattaatcccagggctcc------------------------------ +------------------------------tgcccccgctcagggctcctcc------------------ag +cacaccct-----------ctagt------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggctcacaacatatcgttcgtcaccccaccatctagtag +atcttct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>DQ658413.1/1-7558 |Norovirus Hu/GII.4/MD-2004/2004/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------tacagc +a------ac----gacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaacaccacag +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgttaggcaacc +ggaagaagctaacacggccttcagtgtccccccgctctatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---aatatctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgttgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtagatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcctcgctgttcac +caggcccataaaagacataatagggaagctgaagcctcttaatatcctcaacatcttggcctcgtgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacagggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgccgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatagcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaatgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactgcagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcagcttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaggttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtactccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttagaccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagttcccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttaagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggcctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggccagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccattcacagagcccagggga +aaaccaccaaagccaaacgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgtac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaaaaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccctatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcgatgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-tcaaattctcct +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgtcagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttgctgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcacttggccagaatgtacaa +tggttatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaagttactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcaga------------------------------------------------ca---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaagatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggggatggctctacc--------cgc-----------ggccacaaagccacagt +gagcactggggatgtccatttcactccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccagaatgaaccccaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaggaatgggtgcaacacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaagcttccttccaacatgacaaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------acccttgggggcact---------------------------------a +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgctcggggcttctcc------------------ag +tgtacctt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgccc +acattcgtaagcgaggggagtcacg--------ggcataatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------cttt-----------c-tc----t--------tcttt- +-------a-------gt---gtcttt---------------------------------------------- +------------------------------------------------------------------------ +- +>DQ415279.1/1-7559 |Norovirus Hu/GII/Carlow/2002/Ire putative polyprotein, putative capsid protein, and putative minor structural protein genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cctccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtt-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggacgaaatagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgccctcctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcccacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagaacttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagaggggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaagtgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcactccaggtacagatatcactatgatgctgattac +t-ctcgttgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtaccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtcacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaaattgacagcaaagctc +agggaatatgggctgaaaccaactcgccctgacaaaactgaaggaccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaatcatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttagccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttaagccccagccaggtcactatgttcccccatgt +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccctattcctttggaaaagttgttcacgggtcctagtggtgcctttgttgttcaaccaca +aaatggcaggtgtacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccata----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggagatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcaccccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggtcaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccaaaatgaacctcaacaatgggtgctcccaag +ctactcaggtaga-actggc------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgactcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcagcatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctagggctacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------gccctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tgtccccgttcggggcttctcc------------------ag +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AY823305.2/1-7612 |Norovirus swine/GII/OH-QW125/03/US, complete genome +----gtgaataatgat---ggcgtctaac-gacgtcaacgttgccgc---tggc------------gacaac +a----cca------atggcaatgaaaagcaaacaaaaatgcccacctc------gggcatttttaccaacgt +caaggttggtattaaaaaga-----tcctgggtgatcgcgattgcgatgc---------------------- +---------------------ccagccccccgcccccacaccgcgggagaaacc-------ggagccacccc +ccc----ctcctgaggaaaccgttgcgggggaacccccacctgagggctgt---------------gtggct +tatcacaagg----------atgg---tgacaggatcgacgggctccctagg---ggacccgccgacgc--- +cgaacccaagtgcatggcttatagcgccccccctccccacgaaagagaagatggacctgcaatggagccgct +cccaggctccattcttgagatgtgggatggtgaaatatatcactacgggctctatgtcaacgacggcctagt +tcttggagtccaccgccccgcatctgccatttgcaccgccaccattgagttaaccccactctcactctactg +gcgtgtggtgcacgttcctc---agaacgttattccatcagagacactcaagcgcttggctggagaaaagtt +cccctatacggcatttgataacaattgctatgcattctgctgctgggttttagacttgaacgattcctggct +gtc---ccgcaagatgataaatcgtaccaccggcttttacaaaccctatcaggtctggaacaggaagcccct +ccccaccatggatgatggaaagatgaagaaagtgacaaatgttttgctctgtgccctatcttccctcttcac +ccgcccgatcaaggacgtgatcggcagcttgaagccccttaatttacttaatttgctggcatcatgtgattg +gacattcggtgggatcgtcgagaccctagtccttgttggtgagcttttt---gggatattctggactccccc +ggatgtttcagccttccttgcccccctgcttggcgattatgagctccaggggccccaagacctggccacgga +gcttgtgcccatactcatgggtggggtcgggatgttgcttggtttcaccacagagaagatagggcgcatgtt +cacctcagcagcgaataccctgcggtcgtgccgagacatcggggcctatgggctggacgtcctcaagctaat +catgaaatggttcttccccaaggccgatgaggagagtgagcttgcaatggtccggtcaatagaagatgctgt +gctagacatggaggctatcgaaaataaccatctcacctccttgcttaaagacagggacagccttgccacctt +catgaagacacttgatgttgaggaagaaaaagcaagacgcctctcaactaagtcagcatctcctgacatagt +gggaaccataaatgccctccttgcgcgcatctctgcggcgcgctccctagtacaccgagcaaaggaggaaat +gtccaaccgagtgaaaccggttgtggttatgatctcgggcaggcccgggattgggaagacacacatggcccg +ggaactagcacggaaaatcggtgccacgatgtcaggtgaccagagagttgggttggttccaagaaatggtgt +cgatcactgggacgcctataagggagaaaggatagtcctgtgggacgactatggtatgagtaaccctgttaa +ggatgccctgacactacaggagttggccgacacctgccccgtgaccttaaattgtgacaggatagaaaacaa +aggaaagatgtttgatagtgatgtcattataataacaaccaatcttgcaaaccctgcccccttggactatgt +caactttgaggcgtg-ttcacgtcgcatagatttcctagtctatgctgaagcacctgacgtggagaaggcta +agagggattttcctggacagcctgacatgtggaagggggcctttaaagatgattcgtcccatatcaaacttt +cacttgctccccaaggtggctttgacaagaatggcaacaccccctacggcaagggtgtcatgaagaccctga +ctcaggcctccctcacggcacgtgttctagggttagtccatgagagaattgatgaattcgaactgcagggtg +atacgggtgccgtttacaactttgataataataagattggggcattcagaaagctcgcagccgacaacaaat +acggcttgatggagacaatgagagtgggggccaaactacagagtgtcaagaacattgaccaactccgcgcca +acctgcgggacataactatcaagccctgcctgattatttataatagttccacctactccttagagtcaaatg +gcaaaggcaatgtggttatcaagaaggttgagaaccaggttgtccagtccagaaacaccatccacactgcca +tcctcaggatgaaacaagcaaagattaggtattacatcaagtgtatccaagaggcaatctactccctgttgc +aggtggcgggggcttcatttgtcgttgcaaggatcacgcggaaattcacacgcgacgcgtggtcccactggg +acaac-----------------------------------acccctgaccaggctccccccgtacccaca-- +ccac--cacaggatgcctcctgggaaatagctgccgccgatgtcacacccgagggcaagaaaggaaagaaca +aaaagggcagaggaaagaaacacacagccttctcaagtaaaggcctgagtgatgaggaatacgatgaataca +agaggatcagggaggaaagaaatggtaagtactctattgaggaatatctgcaagacagggaccgcttc---t +atgaagagctcaccatagcccaggccactgaagagaactttggggatgatgacgagatgcgactcaggcaac +gcatctttagaccaagcaagaagcagcgcaaagaggagcgcggggttttgggtctagtcacaggttcagaga +tccggaaaagaaaacccgatgacttcaaaccccgtggaaacctgtgggccgatgataacagagaggtggact +acagtgcaaagatagattttgaggcacccccaagtgtttggtctcgcattgtcaactttggcacgggctggg +cgttttgggtctctc-ccagtctactcataacatcaacacatgttataccaagaggtatcactgaagccttt +ggggtgccaattgagcagatccaggtccacagatcaggggagttttgtcgtttccgcttcccgaaacccatc +cgacccgacgtttcaggcatgattctagaggagggagcccctgagggcaccgtgtgttccatcttgatcaag +agaacaactggtgaaatgatgccgctcgctgtccgtatgggaacccatgctacgatgaagatacaagggcgg +acggtcggcggtcaaatgggaatgctgctcactgggtccaacgccaagaacatggacttgggcacgacccct +ggcgattgtgggtgtccttacatctataagagaggtaacgactatgtggtggctggagtccacacagctgcc +gctaggggtgggaacaccgtggtctgtgccacacagggccccgagggtgaggcagctctggagggtagtgga +agctttggcacttactgtggggcgccaatattgggtgtaggagacgctcccaaactcagcaccaaaaccaaa +ttctggaggtcttcaaccactcccctcccgccagggacttatgagcctgcctaccttggcgggaaagatccc +cgtgtggagggaggcccctcacttcagcaggttatgagagaccaactcaagccctttacagaacccagagga +aagatgccaaaacctgctactcttgagtcggccaaggccacgataatcaatgtcttagaccaaaccctggat +ccccccaagaaatggacatatgctcaggcctgtcaatccctggacaaaaccacctccagcgggcacccacac +cacgtccggaagaacgaccactggaatggtgactctttcacgggccccctcgctgaccaagcatccaaggcc +aacttgatgtacgagcagggcaagcatatgcaaccagtctatactgcagcgttgaaagatgagcttgtgaag +actgataagatctacaagaagatcaagaaacggctcctttgggggtctgacttagggaccatggtaaggtgt +gcacgtgcctttggcgggctgctagatgaactcaaggcaaactgcatcaacctgccttgcagggttgggata +aacatcaatgaagatggtcccgccatctttgagagacactccagatacacctaccacctggatgctgattat +t-caagatgggattcaacgcaacaaagggccatccttgccacggccatggagatcatgg-ttcgcttctcac +ccgagcccgagct-tgcccaggtggtggtcgaggacctcctttcacccagcgtccttgacattggtgacttc +aagatctcggtccttgaaggcctgccctcaggcgtcccttgcacatcacagtggaactccatagcgcattgg +cttctaacactctgtgcaatctctgagtcaacagggctttcccctgatgtggtgcaagcttactcgtgcttc +tccttctatggtgatgatgagatcataagcacggacatagagatcaaaccagaggttctcacagaaaagctc +aagagctatggtttaatacccaccagaccagacaaaagcgaggggccactagtcattagcaaagacctgtcc +gggttgactttcctgaggcggaccataacccgtgacccatcaggttggtttggaaaattggacaaggactcc +attttgaggcagctttactggaccagggggcccaaccatgatgacccctatgagaccatgaccacacactca +cagagagccacacagcttatggcactacttggggaagcctcattgcatggcgcagccttttacagcaaggtc +agtaagctagtggtgacagaaatcaaagaaagtggcctggagttttacgtgcccaggcaagaggccatgttt +aggtggatgaggttttctgacctcagcacgtgggagggcgatcgcaatctggctcccgagggtgtgaatgat +gatggcatcgaatgatgctaccgctccgac---tgatggagctgccggtctcgtcccagaggtcaccaatga +gaccatggcactggaacccgtcgcaggggcggccttggccgcgcctgtcgtagggcagcataacgttattga +cccctggattagaggtaattttgtgcaagcccctaatggagaatttacagtttccccccgtaattcccctgg +agaggttttactaaatttggaattaggccctgaattaaacccttatctggctcatcttgcccgtatgtacaa +cgggtacgctggtggaatggaggttcaggtggtgctcgctgggaatgcgttcgcagc---ggggaaaatcat +ctttgctgccgttccaccaagtttcccagttgatgctttgagcgcgcccacgataacaatgtgcccccacgt +tatagtggatgtgagacaactggagccagtattgctccctatgccagatgttaggaataatttctttcatta +taaccagagttctgac---cccaagcttcgattggttgcaatgctttatacgcccttgagagccaatagccc +aactgatgatgtgtttactgtgtcttgtagagttcttacgaggccatcccctgattttgagttcaccttttt +gataccacccacagttgagtccaaaagcaagccttttaccattccccagcttaccttgtctgagttgtctaa +ttcaaga---tttcctgcacccattgatatgctttatactagtcccaatgataacattgtggtgcagcccca +gaatggaagatgcacacttggtggtgaactacaaggcacaacccagctccaaccaagccttatctgctcctt +tcgag-----------------------------------------gagtgaccctcaatgagacttcccgg +atgttggttgatcaagaggaag-agg----------------------------------------aagagg +gggaggttcagcg----------------------------------cccacaag-------cccgcgcctt +caaccatgaataccatcttcagctgcaaaatttagatggcactgactatgaccctgcaggggatctccccgc +aaccttaggggcacctgactttattgggacagtgtatggagtggttagtcagc---gcaccaccc------- +-------------------gtgatagtgcagct--------agg-----------gcacatgaggccaaaat +caccactagtgaccccaggtatgctcccaagcttggatcagttgagttcg------------taacagagtc +aacagatat---tgtgctgaatgaccagacca---------------------------agtttacccctg- +--------ttggtcttgcccataaccgggcag------------ttgactacaagcagtgggagctgccaca +ttatgcaggggag-ctcaca------gccaacaccaatttagcccctcctgtggcgcctgtttaccccggtg +aacaattgcttttcttccgctcaaaccttcccctt-gcaggtggtacagccg-------------------- +--caagtgttcttgattgtcttttgccccaagagtggattcaacatttttatcaggaatcattcgcccccca +gtctgacattgcactcctgaggtatgtgaaccccgacacaggtagagttctctttgaagcaaaattgcaccg +acagggttacataactgtggctggtgctggcaccagtcctgtggccgtgcctccaaacggctattttaggtt +tgagtcttgggtatcacagttttatacactagcccccatgggatctggaacggggcgcagg---------ag +gaatc---------agtaatggcggggcaaattatagccgggattgctgctgatctgtttagttctggactt +ggctcacttattaatgctgg---tactaatgcccttaatcaaaaggtggaatatgattttaataagaaa--- +------------------------------ttacagtctgcttcttttgctcatgatagggaaatgctgcag +gcgcaggtcgcagccacacggcaactgcagcaagatatgattaagatcaaggaagacacactcatgctcgcc +ggcttctctccatcagatgcggcgcggggttctgtaaacgccccaatgactaaggtccttgactggaacggt +actaggtactgggctccaggtgctatgcgcacctcatcttattctgggcggttttcctctcaa--------- +----------gtgccccagaccaccttttataaggaac-------------------------------cac +ccaagataccatctagccaggcgaagcctaatccacggccggaccccaa----------------------- +---gccacctgcgactcagcaaccgcagtcagcccctgctcc---ttccggg------------------ag +cagttccg---gttcaggatcagt-----------ctcgtctcactctacccagtc---------------- +-------------------------------------aacctccctttccac------------------tg +tgcgttc----c---cccaa-------------------ttcaacactgtcac------------------- +-----------------------------------------------ggaccgcgagttgggttctctcaca +gaat------cttgagccttttatgc---cgggctcactgaacatcagcggtgtgactccaccatctgatac +tttttct---agtagatcatcagtttcttctagatcttcactttcgggaa---cggtctcaaccgtccccaa +agagattttgga-ctcctggacacctgcat------------ttaacacacgcaggcaaccgctctttgctc +gcctccgcaggaggggggagtcaca--------agtttag--t-----------gaaaagttat-------- +-------ctt----------tg------------ttttcctt---------ttccttttc------tgtttg +g------------------taactttt--------------------------------------------- +------------------------------------------------------------------------ +- +>DQ078814.2/1-7559 |Norovirus Hu/GII.4/Hunter504D/04O/AU, complete genome +----gtgaatgaagat---ggcctctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggcctaagcagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaatatccc +ccc-----------------------------tcccccgcccaacgg------agaggatgaaatagcggtt +tcttatagtg----------tcaa---agatggtgtttccggtttgcctgatctttccaccgtcaggcaacc +ggaagaatctaacacggccttcagtgtccctccactcaatcagagggagaatagagatgctaaggagccact +gactggaacaattctggaaatgtgggatggagaaatctaccattatggcctgtatgtggagcgaggtcttgt +actaggtgtgcacaaaccaccagctgccattagcctcgctagggtcgaactaacaccactctccttgttctg +gagacctgtgtacactcctc---agtacctcatctctccagacgctctcaagaaattacacggagagacgtt +cccctacacagcctttgacaacaactgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcaggccctaccaagattggaataggaaacccct +ccccaccatggatgactccaagttaaagaaggtagctaacatattcctgtgtgctctgtcttcgctattcac +caggcctataaaagatttaatagggaagctaaggcctcttaacatcctcaacatcttggcctcatgtgactg +gacttttgcaggcatagtggagtccttgatactcttggcagaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgattacgagctacaaggacctgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctaggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcatccaccttgagagcttgtaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatagtgagatccatcgaggatgcagt +cctggatctcgaggcaattgaaaacaaccatatgaccactttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttctctggtgcatcgagcgaaggaggaact +ttccagcagaccaagacctgtagtgttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctcccttacaggagaccagcgtgtaggcctcgtcccacgcaatggcgt +cgaccattgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaaccccatcca +cgatgccctcaggttgcaagaactcgctgacacttgccccctcaccctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcaccactaatctggctaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgacttcctcgtgtatgcagaagcccctgaggtcgaaaaggcga +agcgtgacttcccaggccaacccgacatgtggaagaacgccttcagttctgatttctcacacataaaactaa +cattggctccacagggtggcttcgacaagaacgggaacaccccacacggaaagggcgttatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgaattcgaactacagggcc +caactctcaccaccttcaactttgatcgcaataaagtgcttgcctttagacaacttgctgctgaaaacaaat +atgggttgatggacacaatgaaagttggtaggcagctcaaggatgtcagaacaatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgcataatggttgcacctacacacttgagtctgatg +gcaagggcaatgtgagagttgacagagttcaaagcgcctccgtgcagaccaacaatgagctgactggcgccc +tgcaccatctaaggtgcgccagaataagatactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------gactaccagcaaggacgggtgtccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacatcaaaactgagggtaagaaagggaagaaca +agactggccgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagaggacgatgagtaca +agaggattagagaagaaaggaatggcaagtactccatagaagagtaccttcaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaggacttctgtgaagaggaggaggccaagatccggcaaa +ggatcttcaggccaacaaggaaacaacgcaaggaggaaagagcttctctcggtttagttacaggttctgaaa +ttaggaaaagaaatccagatgatttcaaacccaaggggaaactgtgggctgacgatgatagaagtgtggact +acaatgagaaactcagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gattctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacataagtcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcacccgagggcaccgtggtcacactactcatcaaa +aggtccactggagaactcatgcccctagcagctaggatggggacccatgcaaccatgaaaatccaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggacctgggtaccacacca +ggtgattgtggttgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggtggtgac +aataaagggacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcatcactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agagtcaagggttgtctctcactgcagcaagtcatgagggatcagttgaagccatttacagagcccaggggc +aagccaccaaagccaagtgtgttggaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtcccttgacaagaccacttccagtggccatccgcat +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaagctggcagaccaggcttccaaggcc +aacctgatgtttgaagaagggaagaacatgaccccagtctacacagctgcgcttaaggatgaattagttaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttggcgaccatgattcggtgt +gctcgagcattcggaggcctaatggatgaactcaaagcgcactgtgtcacacttcccattagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtacacataccactatgatgctgattac +t-ctcgatgggattcaacacaacagagagccgtgttggcagcagctctagaaatcatgg-ttaaattctccc +cagaaccacattt-ggctcaggtggtcgcagaagaccttctttctcctagcgtggtggacgtgggtgacttc +acaatatcaatcaacgagggtcttccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaacttgtctcctgacaccatacaggctaattccctcttc +tctttttatggtgatgatgaaattgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggttaaagccaacccgccctgacaaaactgaaggaccccttgtcatctctgaagacttgaat +ggcctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaattggagcagagttca +atactcaggcaaatgtactggactaggggttccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacaattgatgtccctactgggggaagccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaccccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgcgattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatattatggagcgcgcccttgggccctgatttgaatccctacctttcccatttggccagaatgtacaa +tggttatgcaggtggttttgaagtgcaggtaatcctcgcggggaacgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaacttcccaactgaagtcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccctgcctgatgttaggaataatctctatcatta +caatcaatcaaatgac---cccaccatcagattgatagcaatgctgtatacaccacttagggctaacaatgc +tggggacgatgtcttcacagtctcttgtcgagttctcacgagaccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattctctgtcccaatcttaactgttgaggagatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcccagcagtgcctttgttgttcaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcaaa----------------------------------attacaca----------------- +----------------atgaatctggcctcccaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctgggaaccccagattttgtaggaaggatccaaggcgtgctcacccaaa------------------- +-----cc-----acaaggagggatggctcgacc--------cgc-----------ggtcacaaagccacagt +gagcactggaagtgtccactttaccccaaagctgggcagtgttcaattctcca---------ctgatacaag +caatgactt---tgaaactggccaaaacacga---------------------------gattcaccccag- +--------tcggtgtcgtccaggatggtagtaccacccaccaaaatgaaccccaacaatgggtgctcccaga +ctattcaggtaga-gatagt------cacaatgtacacctagcccctgccgtggcccccacttttccgggtg +agcaacttcttttctttaggtccactatgcccg------gatgcagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggagtgggtgcagcacttctaccaagagtcagccccagcaca +atctgatgtggcactgctgagatttgtgaatccagacacaggcagggttttgtttgagtgcaagcttcataa +atcaggctatgtaacagtggctcacactggccaacatgatttggttatcccccccaatggctatttcagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatggagcggggcgtaga---------cg +tgcat---------tataatggctggagctttctttgctggattggcatctgatgtccttggctctggactt +ggctctctaatcaatgctgg---ggctggggccatcaaccaaaaagttgagtttgaaaataacagaaaattg +caacaagcttccttccaatttagcagcaacctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccaccaaaaagttgcaacaggaaatgatgaaagttaaacaggcaatgctcctagagggt +gggttctctgagacagatgcagcccgtggggcagtcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcccgatgctaggactacaacatacaatgcaggccgcttttccactcct--------- +ca---------------------accctcgggggcatc---------------------------------g +ccaggaa----------------gaactaatctcagggctac------------------------------ +------------------------------tgtccccgctcggggctcctcc------------------ag +cacacctt-----------ctaat------------gcttctgctgctactt-------------------- +----------ctgtgt-----actcaaatca------aactgcttcaac----------gag--------ac +ttggttc--------tacagctggttctggtaccagtgtctcgagcctcccgt------------------c +aactgc---------------------------------------aagggctaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggggcccacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------ctttc------------tt----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AY772730.1/1-7579 |Norovirus Hu/NLV/GII/Neustrelitz260/2000/DE from Germany, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgttgccgttgcttgc------------aacaac +a------ac----aacgacaaggaaaaatcttcgggtgaag---------------gtttatttacaaatat +gtcttccaccctaaagaaag----ccctcggggctcggcccaaacagcct-gccccgagggacaactcacaa +aag---------------------cccccaagaccaccaacgcccgagttgatt-------aaaagggtgcc +ccc-----------------------------tcccccacctaatggc------gaagaagaaccagtcatt +aggtttgagg----------ttaa---gagtggaatctctggcctgcccgagctcacgacagttccccaacc +agatgtgaccaatacggcattcagtgttccaccgttgagcttgagagaaaacagggaggccaaggaaccgct +gactggggcaatactagagatgtgggatggagagatatatcactatggcttgtatgtggagaaaggcctagt +gttgggtgtgcacaaaccacccgcagctataagcatggcaaaagtggaaatgacaccgctgtcgctatactg +gcgtgtggtgtatactcccc---aatacctcatctcccccgacactctcaggaggctcaacggagagacatt +ccctyacactgcctttgataacaactgttatgccttctgttgctgggtgttagaccttaatgactcatggct +cag---cagaagaatggtgcaaagaacaacaggcttcttcagaccctaccaagagtggaacagaaagcccct +acccactatggatgactccaaaattaagaaggtggcaaacatattcctatgttcactgtccacactgttcac +cagacctataaaagacatcatagggaaaattaaaccactaaacatcttaaatattctggcaacgtgtgattg +gacgttcgccggaatcgtagagtctctaatattacttgctgaactcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgctcccttacttggcgagtacgagttgcaagggccagaagacatcgccgttga +gctcgtacctgtagtaatgggagggattggtttggtgctaggattcaccaaagagaaaattggcaaaatgct +gtcctcagcagcgtcaacgctcagggcttgcaaagacctcggtgcttatggtctagagatactcaaattggt +catgaaatggtttttcccaaagaaagaagaagctagtgaattagccatggtgagagcaatagaggatgctgt +actggatcttgaggcgatagaaaacaatcacatgacaactctgctgaaagataaagacagccttgcaaccta +catgaaaacactggatctagaggaagagaaagctagaaaattgtccacaaaatctgcatcccctgacatagt +tgggacaatcaacgccctgttggctcgaatagcggcggctagatcactagtccacagggccaaggaggagct +atctagcaggatcagaccagttgtcgttatgatatctggcaagccagggataggcaagacccacctggccag +ggaggtggcgaaaaaggtggcatccactctcacgggagatcaaagagtcggactcataccgagaaacggtgt +ggaccattgggatgcatacaaaggtgagagggtcgtgttgtgggacgactacggcatgagcaaccccattca +tgatgctctgcgcatacaggaattggccgacacatgtcccctcaccttaaattgtgacagaattgaaaacaa +gggaaaagtttttgatagtgaagtcataataatcacaacaaaccttgccaatccagctccccttgattatgt +caactttgaggcctg-ttccaggagaattgacttcctggtgtacgccgatgcgccagaagtggaaaaggcaa +aacgggacttccctggtcaaccagatatgtggaaggacgccttcaaagcggacttttcgcatatcaagttac +aacttgcgcctcagggcggctttgacaagaatggcaacaccccacacgggaaaggagtgatgaagaccctca +ccaccggttctctgattgcccgtgcgtcaggtttactgcatgagaggatggatgaatttgaactccagggtc +ccacaatcaccactttcaatttcgaccggaacagaatcaccgcctttagacaattggctgctgaaaacaaat +atgggctggtggacgccatgagagttggcaatcaattgaaaggggtgaaaaccatggaagaactcaagcaag +ctatcaggaatgtgtccatcaagaggtgccagattatctacaatggttccacgtttgaccttgagtctgatg +gcaagggtaaagttttggtggaaaaggtcaaaaatacctctgttcagaccaacaacgaactggccggagccc +tgcatcacctcagaagtgctcgaatcaggtattatgtcaaatgtgtgcaagaagcagtctactccatcctac +aaattgccggcgccgcgttcgtcaccacacgtattgcacgccgcatga------acatacaagaactttggt +caaagccaccatt---agaccaaagtga--------accagaggctaaggaagagacccccaagttagaa-- +-gat-------gatg---agttcatcatatcctccaaagacatcaaggaggaaggaaagaagggcaaaaaca +aaactggccgtggcaagaaacacaccgcattctctagcaagggcttgagcgatgaggagtatgacgagtaca +agaggataagagaagagagaaatgggaagtactctatagaggagtatcttcaagacagggacaggtat---t +atgaggagctcgccatcgccaaggccacggaagaagacttttgcgaggaggaagaaattaaaatccgccaga +ggatctttcgtcccaccaggaaacaaaggaaggaagaaagggccacgctagggctagtgactggttcagaag +tcagaaaaagaaaccctgatgacttcaaacctaaagggaaattgtgggccgacgacaacagaagtgttgact +acaatgaaaaattggactttgaggcccccccaagcatatggtctaggattgtgagctttggttcaggttggg +gcttctgggtgtcac-caagcctgttcataacatcaactcatgtaatccctgcgggcataacagaggcattt +ggagtccccatcaaacaagttcaagtccacaaatcgggcgagttttgtcggttcagattcccaaaaccaatt +agaccagatgtaacagggatgatcctggaagaaggtgcgccagagggcaccgtagcgaccgtgctcatcaag +cgccccaccggagaactcatgcccctcgcagccagaatgggaacacacgcaaccatgagaattcagggccgc +atggttggcgggcagatgggcatgttgcttactggctcaaatgctaagggtatggatctggggacaactcct +ggtgaccgtggctgcccgtacatctacaaaaggggcaatgactatatagtcattggagtacacacagcagca +gcccgtggtggaaatactgtcatctgtgtcacacagggaagtgagggtgaagcgactctcgagggtggagac +gacaaaggaacatactgtggggcacccatcctgggccctggaggagcaccaaaattgagcaccaaaaccaaa +ttttggaggtcatcaaacacgccccttccaccagggacatatgaggccgcctaccttggtggccgcgacccg +cgtgtaaagggtgggccttctctacaacaagtcatgagagatcagttgaagcccttcaccgagcccaggggt +aaacccccaagacctagtgtgctggaggcagccaaacaaaccatcatcaacgttctcgagcaaactttggat +cccccacaaaaatggacatacgcacaggcgtgtgcttcacttgataagaccacctctagtgggcacccccat +cacgcccgaaagaatgaattctggaacggtgagacctttattggcaagttggcagaccaagcatcaaaagca +aacctaatgttcgaggaagggaaacacatggcaccagtgtacacagcagccctcaaggacgagttagtcaag +accgacaaaatctatgggaggatcaagaaaaggctgctttggggctctgacttatccaccatggtccgatgt +gctagggcctttggtggtctcatggatgagatgaaggcatactgcatatcactcccagtccgagttggcatg +aacatgaatgaggatggtccaataatatttgagaagcattccagatataagtaccaytatgaygcagattac +t-cccgctgggactcaacacaacagagggctgttctagcagcggccttggaaataatgg-tcagattctctg +cagaaccacaayt-ggcgcaaacagtcgctgaggatctgctggcccccagtgtggtagatgttggagacttc +aaaatttcaataaatgagggactcccttctggtgtaccatgcacttcccagtggaactccatcacacactgg +ctgctgactctctgtgctttgtctgaagtcactaacctgtctcctgacatcgtgcaggcaaattccatgttc +tcattttacggtgatgacgagatcgtcagcaccgatataaaattagaccctgaaaagttaaccaccaaattg +agggagtatggtctgaaaccaactcgcccagacaaaacygagggacccctgatcatcagtgaggatttggac +ggactcaccttcctccggaggacggtttctcgtgacccagctggttggtttggaaagttagatcaaagctca +atactaaggcagatgtattggaccagaggaccaaaccatgaagaccccaatgagacaatgataccccactct +caaagacccatacagctcatggcactgcttggtgaggcctcccttcacggaccctctttctacagcaagatt +agtaaattgatcataaccgaactcaaagaaggtgggatggacttttacgtgccaagacaggagcctatgttc +aggtggatgaggttttctgacttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctaa---tgatggtgcagccggtctcgtaccagaggtcaacaacga +gacaatggcacttgaaccagttgcgggagcttcaatcgctgcccctttaactggtcaaaacaatgtgataga +cccctggattagattaaattttgtacaagcccccaatggtgagttcacggtttccccccgaaactcgcctgg +tgaaattttgttaaatttggagttagggcctgaattgaatccatatttagcccatttagcaagaatgtataa +tggttatgcaggtggggttgaggtgcaggtactgctggctggaagtgcgtttacagc---gggcaaattggt +attcgcagcaatccccccccattttccagtagataatttgagccccggtcagatcaccatgtttccccatgt +gattattgatgttagaacacttgaacctgttttgttaccattacctgatgttaggaataatttcttccatta +caatcaacagagtgat---cagcgcatgagacttgttgctatgctttacacccctcttagatctaatggttc +aggtgatgatgtcttcactgtgtcatgcagggttttgaccaggccatcccctgactttgattttaactattt +ggttcccccaacagttgaatccaaaactaaacccttctcagtcccagtgctgaccctcaatgagctgaccaa +ctctcgc---tttcccgtcccgattgatgctatgtacaccagccctaacgattcaattgtggtccaacctca +gaatgggagggcaaccatagacggtgagttgcttggcaccactcaactcatccccagtggtatctgctcatt +tagag-----------------------------------------ggaaaattacaacac----------- +-----------atttgtc------------------------------------------------ag---- +-------atgata----------------------------------ggcac-------------------- +-------ttgtggaatatccaagtctccaacttgaatggcactccgtttgacccaacggatgacgtgccggc +accattgggtatgccagacttttctgggcaaatatttggggtggttagtcaaa---gggacacag------- +----------------gcaccaaccccgcaaac--------agg-----------gctcatgatgctgccct +tgcaacctacagtgccaaatacactcctaagctcggatcagtccaaattggag---------cttgggacac +cgaggattt---acttgaaagacagcctgtta---------------------------aattttcgcccgt +tggtctcagtgaaatt---------ggacaagacaagcac---------tttgaccaatgggtgttgccaaa +ttattccggtgcc-ctagga------ctcaacgtgcacctggctcctgctgtatccccactcttccccgggg +agagattgctgttctttagatcatacatacct------ttaaaaggtggcca------tgggg--------- +--acccatttattgattgtcttgtgcctcaagaatggatacaacacttttatcaagagtcagccccagcaca +atcctcggtggctctgctgaggtatgtgaatccagacacaggtcgcaccctatttgaggccaaattacacaa +ggaagggtttatcaccgtctctagtacggaaaataggcctgtgattgtccccccaaatggttactttaggtt +tgattcttgggttaaccaattttactcattagcccccatgggaactggcaatgggcgcaga---------ag +gatgc---------agtaatggctggagcttttatagcaggacttgctggtgacattgtcaccaacggcatt +ggttcacttgtgaatgctgg---agccaatgctataaaccaaaaagttgattttgaaaacaacaaacagctg +caacagg---------------------------------cttcttttaatcatgacaaagagatgctgcaa +gcccaaattcaagccaccaaacagctacaggctgacatgatttcaatcagacaaggggttttgaccgcgggc +ggcttctcccctactgatgctgcaaggggtgcagtcaacgcaccaatgacccaagtgttggactggaatgga +actaggcattgggcccctggagcctcaaggactaccagcttctctggtgggttcaccaactcc--------- +ac---------------------ccgtgccagaacagttgagccacctaaaagttccccccctgttcaaaat +actttga----------------ctcctgtttctagac--------------ctag---------------- +------------------------------ttccactgtttcatcttcttcc------------------ac +ccgttcga-----------ctgtg------------gttactagttcttctactgccc-------------- +----cttccactaggt-----cttctatgac------tagaaattcacc-----------cc--------gt +-------------------agtgcttctcaatctgtttctt---------ctg------------------c +ttcttc---------------------------------------tcgcactagtgattgggtgcaaaatca +aaacagaatgctggagccatatctta---gagggtcgttgcaaacagccttcgtgtcgccgccctccagtaa +ggcctct---rgta------------------------------atggca---ctgtctcaactgtgccaaa +agaagttttgga-ctcctggacatctgcgt------------ttaatacccgcagacagccgctcttcgctc +acctccgccggaggggggagtcaca--------agcttag--t-----------gaaaagatta-------- +---t-g-gtt-ttct-----tt------------ctatctc----------tt-------------ttcttt +t-gttgaaaatc-ttat---gtcttttaaaaaaa-------------aaaaaaaaaaaaaaa---------- +------------------------------------------------------------------------ +- +>AY237415.2/1-7541 |Human calicivirus strain Mc37, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgct------------aatagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gaatgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcacggcctaaacagcct-cccccgagggaaataccacaa +aga---------------------cccccacgaccacccaccccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccacacaacgg------ggaggatgaaccagtggtt +acttacagcg----------tcaa---agatggcgtttccggcttgcctgagctcactactgtcaggcagcc +gggtgaagccaacacggcgttcagtgttcccccactcaaccaaagggagaatagggatgccaaggagccact +aactggaacaatcctggaaatgtgggacggggagatctaccattacggcctgtatgtggaacgaggtcttgt +acttggtgtgcacaaaccaccggctgccatcagcctcgccaaggttgaactaacaccactctctctgttttg +gagaccagtgtatacaccac---agtatctcatctccccggacactctcaggaaactgcacggagagtcgtt +tccctacacagcctttgataacaactgctatgccttctgttgttgggtcctggacttaaatgactcgtggtt +gtg---caggagaatgatccagaggacaactggtttcttcaggccctaccaagactggaataggaaacccct +tcccaccatggatgactccaagttgaagaaggtagctaacatattcttgtgcgcgctatcttcgctattcac +taggcccatcaaagacataataggaaaggtgaggcctctcaacatccttaacatcttggcctcatgtgattg +gtctttcgcaggcatagtggaatctttgattctcttggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccctttactaggtgactacgagctgcagggacccgaggaccttgcagtgga +actcgttccagtagtaatgggggggattggtttggtgctaggattcaccaaagagaagatcgggaaaatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacggactggaaatcttaaaattggt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgaggtccatcgaggatgcggt +gctggacctcgaggcaattgagaacaaccacatgactgccctcctcaaagacaaagacagcctggcaaccta +catgagaactcttgacctcgaggaggagaaagccagaaagctttcaaccaagtctgcttcacctgatatcgt +gggcacaatcaacgctctcctggcgagaatcgccgctgcacgctccctggtgcatcgggcgaaagaggagct +ctccagcagaccaagacctgttgttgtgatgatatcaggcaggccaggtatagggaaaacccaccttgccag +ggaattggccaagagaatcgctgcttctctcacaggggaccagcgtgtgggtctcatcccgcgcaatggtgt +tgatcactgggacgcatataagggagaaagagtcgttctatgggacgactatggaatgagtaaccccatcca +cgacgccctcaggttacaagaacttgctgacacctgccccctcacgctaaattgtgataggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaacctggccaacccagcaccactggactatgt +caattttgaagcgtg-ctcgaggcgcatcgacttcctcgtgtatgcagatgcccctgaggtcgagaaggcaa +aacgtgactttccaggtcaacctgacatgtggaagaacgctttcagttctgacttctcgcacataaaactga +cgctggctccgcagggtggcttcgacaagaacggaaacaccccacatgggaaaggcgtcatgaaaactctca +ctactggttccctcatcgctcgagcatcagggctactccatgagaggttagatgagtacgagctgcagggcc +caacccccaccaccttcaactttgaccgcaacaaggtgcttgcgttcagacagcttgctgctgaaaacaagt +acgggttgatggacacaatgagagtcggaagacagctcaaagatgtcaggaccatgccagaactcaaacaag +cactcaagagtatctcaatcaagagatgccagatagtgtatagtggctgcacctatatgcttgagtctgatg +gcaagggtgaagtgaaagttgacagagttcagaacgccactgtgcagaccaacaatgaactggccggtgccc +tacaccatcttcggtgtgccagaattagatactatgtcaagtgcattcaggaggccctgtattccatcatcc +aaattgctggagctgcatttgttaccacgcgcattgtcaagcgcatga------acatacaagacctttggt +ccaagccacaggtggaagatacagagga--------gactgctagcaaggatgggtgcccaaaacccaag-- +-gat----gatgacg---agttcgttgtttcatccgatgacatcaaaactgagggcaagaaaggaaagaaca +aatctggccgtggtaagaagcacacagcattctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +aaagaatcagagaagaaagaaacggcaagtactctatagaggagtaccttcaggacagagacaagtat---t +atgaggaggtggccatcgccagggcgaccgaagaggacttctgtgaagaagaagaggccaagatccggcaaa +ggatttttaggccaacaaggaaacaacgcaaagaggagagggcctctctcggtttggtcacaggttctgaaa +tcaggaagagaaacccagacgacttcaagcctaaaggaaagctgtgggctgatgacgacaggagtgttgact +acaatgagaaacttagttttgaagccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gtttttgggtttccc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttc +ggggttcccatcaagcaaattcagatacacaaatcgggtgaattttgtcgcttgaggtttccaaaaccaatc +agaactgatgtgacaggcatgatccttgaagaaggtgcgcccgaagggaccgtggtcacattactcatcaag +agaccaactggagaactcatgcccttggcagccagaatggggacccatgcaaccatgaagatacaagggcgc +actgttgggggtcaaatgggcatgctcctaacaggatctaacgccaagagtatggacctgggcaccacacca +ggtgactgtggctgtccctacatttacaagagggggaatgactacatagtcattggagtccacacggctgct +gcccgtggaggaaacactgtcatatgtgccacccaggggagtgagggagaagccacacttgaaggcggtgac +aacaagggaacctattgcggtgcacccatcttaggtccagggagtgccccaaagctcagcaccaagactaag +ttttggaggtcatccacagcaccactcccacctggcacctacgaaccagcctaccttggcggcaaggacccc +agagtcaagggtggcccctcattgcaacaagtcatgagggaccagctgaaaccattcactgagcccaggggt +aaaccaccaaaaccaagtgtgctagaggctgccaagaaaaccatcatcaatgttcttgaacaaacaattgat +ccacctcaaaaatggtcattcgcgcaggcatgcgcatccctcgacaagaccacttccagtggccacccgcac +cacatgcggaaaaacgactgctggaacggggagtccttcacaggcaaattggcagaccaggcttccaaggct +aacctgatgtttgaggagggaaagaacatgaccccagtctacacaggtgcgcttaaggacgagctggtcaag +actgacaaaatttatggcaagatcaaaaagaggctcctctggggctcggatctggcgaccatgatccggtgt +gcccgagcgtttggaggcctgatggaggaactcaaagcacattgtgtcacactacccgtcagagtaggtatg +aatatgaatgaggatggccctatcatctttgagagacactccagatataaatatcattatgatgctgattac +t-cccggtgggactcaacacaacaaagagccgtgttagcagcagccctagaaatcatgg-tcaagttctccc +cagaaccgaatct-ggcccaaaaggttgcagaagaccttctctctcccagcgtgatggacgttggcgacttc +aaaatatcaatcaatgagggcctcccctccggggtgccctgcacctctcaatggaattctatcgcccactgg +ctcctcaccctctgtgcgctttctgaggttacaaacctgtcccctgacattatccaggctaattccctcttt +tccttctacggtgatgatgaaattgtgagcacagacataaaactggacccagagaagctgacagcaaaactt +aaggaatacgggttgaaaccgactcgccctgacaagactgagggaccccttgttatctctgaggacctggat +ggcctaaccttcctgcggaggactgtgacccgcgacccagctggctggtttggaaagctggaacagagttca +atacttaggcaaatgtattggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattgatgtctttgctgggcgaggctgcactccacggcccagcattctacagcaaaatc +agcaagctggtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagcctatgttc +agatggatgaggttttcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctag---tgatggtgcagccggcctcgtgccagaaagtaacaatga +ggttatggctcttgaacctgttgctggggcatctttagctgcccctgtgactggtcaaactaatataattga +cccatggatcagaatgaattttgttcaagccccaaatggagaattcactgtttccccaagaaattcccctgg +agaagtactcctaaatttggaattgggtcctgaattaaacccttatctggcacacctatctaggatgtataa +tggctatgctgggggtatggaagtacagatcatgctagctgggaatgcgttcactgc---tggtaaactgat +ctttgctgctgtgcccccacattttcccattgaaaatttgagtcccccccagattacaatgtttccacatgt +gattatagatgttagaaccttagaacctgtgttgctccctatgcctgacatcaggaattctttctttcactt +tattcagagggatgag---ccaaagatgaggttggtggcaatgctgtacacgccactgaggtccaacggatc +tggggatgatgtattcacagtctcctgcagggttctgacccgccccactcctgattttgatttcacttactt +agtaccaccaactgtcgagtcaaagagtaagcctttcactttacctatattaacattgggagagttgacaaa +ttctagg---tttccattacccattgatgtcctgtatactaacccaaatgagagtgcaattgttcaatgtca +gaatggtaggtgcaccctggacggcgagttgcaggggacgactcaactcctacccacaggcatctgtgcgtt +caggg-----------------------------------------gcaaagtcactcaacaggtgc----- +----aggatgaacatcg-------------------------------------------------gg---- +-------gcacac----------------------------------attggaat----------------- +----------------atgacagtaaccaacttaaatggcaccccgtttgacccaactgaggatgtccctgc +tccactgggcaccccggatttctccggccaaatttatggggtaattagtcaga---ggaataccaacacagt +tcccggt-----gaaggaaacctcccggccaac--------agg-----------gctcatgaggcagtgat +tgcaacctacagtcccaaattcacacccaaattgggcaatattcaattcagca---------cttgggaaac +tcaagatgt---gagctctggacaacccacca---------------------------agttcaccccag- +--------ttggcttggcctccgtggatgctaact---------ctcattttgaccaatggaccctccccag +ctattctggtgcc-ctaact------ctaaatatgaacttggccccatctgttgccccagttttccctggag +agtgtcttttgttctttagatctttcatcccat------taaaagggggcta------tggga--------- +--accctgctattgattgcttgatgccacaggaatgggtccagcatctctaccaggagtcggcaccatccct +tagtgatgtggctttagtgaggtatgtgaacccagaaactgggcgcaccctttttgaagccaagttgcacag +gaatggatttctgactgttgctaggaacagtgctggacctgtcgtggcccccacaaatggttattttagatt +tgattcttgggtcaaccaattttacactttagcccccatgggaaatggcagtgggcgcaga---------ag +aatgc---------agtaatggctggagctttcatagcaggtttggctggtgacgttctcagtaatgggatc +gggtcgctcattaatgctgg---tgccaatgcaatcaatcagaaagctgaattcgatttcaatagacaa--- +------------------------------ttacaacaaaactctttcaatcatgataaagaaatgctccag +gcccagattcaagcaacaaagcagctgcaggcagacatgatcgccatcaagcaaggggtgttgaccgctggc +ggcttctcccccactgacgcagcaagaggagcagtcaacgctcccatgacacaggctttggactggagtggc +acgaggtactgggccccaggtgccatgagaacatctagttattcaggtaggtttctgtcaa----------- +-------------------------------ctactcc---------------------------------a +actaggc----------------aggttgagttccctcagc--------g---------------------- +---------------ca--agagtgctgccccctctagtgctgattccacctatag-------------tgg +g---tctt-----------ctagg------------tctacagtttctact--------------------- +------actctcggat-----cttctgcttc------ttctagttctag----------aat--------at +caccctc--------aactcattctagtttgatttctggcacttcttcct---------------------c +aagatc---------------------------------------aagaaccagtgactgggtgcgtgagca +aaaccgaagtctagaaccctttatgc---atggggctttgcagactgcttatgtcactcctccatcaagcag +agcttct---agca------------------------------acggga---cagtctcgaccgtcccaaa +aggtgttttgga-ctcttggacacctgcgt------------ttaacacccgcaggcagccgcttttcgcat +accttcgaccgaagggagagtcacg--------agtttag--t-----------gaaaagatt--------- +---a-a-t-t-ttctct---t---------------------------------aaat--------ttttc- +---------------tt---tt-------------------------------------------------- +------------------------------------------------------------------------ +- +>AY502020.1/1-7559 |Norovirus genogroup 2 strain Hu/NoV/CS-G12002/USA nonstructural polyprotein, capsid protein, and minor structural protein genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaagtagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccattacggcctgtatgtggatcgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaactgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +acccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgtttac +taggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccttgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggttagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaatcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcctcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccacacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctggatgagtttgaactacagggcc +cagctctcaccaccttcaactttgatcgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtgcacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggccagatgggcatgcttctgacaggatctaatgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccggggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaaatgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtaccctgcacctctcaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagtctcaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgatgaaatcgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactagaggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcacctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaatcaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggggatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccaaaatgaacctcaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctattcgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcttgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcat---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgagacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgatgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcatt---------------------------------g +ccaggaa----------------ggaccaatcccagggctac------------------------------ +------------------------------tacccccgctcggggctcctcc------------------ag +tgcacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctgggttgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttt-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AY502023.1/1-7559 |Norovirus genogroup 2 strain Hu/NoV/Farmington Hills/2002/USA nonstructural polyprotein, capsid protein, and minor structural protein genes, complete cds +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgct------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctgtcacttttaaacgag----ccctcggggcgcggtctaaacagccc-cccccgagggaaacaccacaa +aga---------------------cccccacgaccacctactccagaactggtc-------aaaaagatccc +tcc-----------------------------tcccccgcccaacgg------agaggatgaaatagtgatt +tcttatagtg----------tcaa---agatggcgtttccggtttgcctgagctttccaccgttaggcaacc +ggaagaagctaatacggccttcagtgtccccccgctcaatcagagggagaatagggatgctaaggagccact +gactggaacaattctggaaatgtgggatggggaaatctaccactacggcctgtatgtggagcgaggtcttgt +actaggcgtgcacaaaccaccagctgccattagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtgtatactcctc---agtacctcatctctccagacactctcaagaaattacacggagaaacgtt +cccttacacagcctttgacaacaattgctatgccttttgctgctgggtcctggacctaaacgactcgtggct +gag---taggagaatgatccagagaacaactggcttcttcagaccctaccaagattggaataggaaacccct +ccccactgtggatgattccaagttaaagaaggtagctaatatattcctgtgtgctctgtcttcgctgttcac +caggcccataaaagacataatagggaagctaaagcctcttaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggagtccatgatactcctggcagagctcttt---ggagttttctggacaccccc +agatgtgtctgcgatgattgcccccttactcggtgactacgagttacaaggacccgaggaccttgcagtgga +gctcgtccctgtagtgatggggggaattggtttggtgctgggattcaccaaagagaagattggaaaaatgtt +gtcatctgctgcgtccaccttgagagcttgcaaagatcttggtgcatatgggctagagatcctaaagttggt +catgaagtggttcttcccgaagaaagaggaagcaaatgaactggctatggtgagatccatcgaggatgcagt +gctggacctcgaggcaattgaaaacaaccatatgaccaccttgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccagaaaactctcaaccaagtctgcttcacctgacatcgt +gggcacaatcaacgcccttctggcgagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacctgtagtcttgatgatatcaggcagaccaggaatagggaagacccaccttgctag +ggaagtggctaagagaatcgcagcctccctcacaggagaccagcgtgtaggcctcatcccacgcaatggcgt +cgatcactgggatgcgtacaagggggagagggtcgtcctatgggacgactatggaatgagcaatcccatcca +cgacgccctcaggttgcaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaataa +aggaaaggtctttgacagcgatgtcatcattatcactactaacctggccaacccagcaccactggactatgt +caactttgaagcatg-ctcgaggcgcatcgatttcctcgtgtatgcagaagcccctgaagtcgaaaaggcga +agcgtgacttcccaggccaacctgacatgtggaagaacgcctttagttctgatttttcacacataaaactag +cactggctccacagggtggcttcgataaaaacgggaacaccccgcacgggaagggcgtcatgaagactctca +ccactggctcccttattgcccgggcatcagggctactccatgagaggctagatgagtttgaactacagggcc +cagctctcaccactttcaactttgatcgcaacaaagtgcttgcctttaggcaacttgctgctgaaaacaaat +atgggttgatggacacaatgagagttgggaggcagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaagtgccagatagtgtacagtggttgcacctacacacttgagtctgacg +gcaagggcaatgtgaaagttgacagagttcagagcacctccgtgcagaccagcaatgagctgactggcgccc +tgcaccacctaaggtgtgccagaatcaggtactatgtcaggtgtgtccaggaggccctgtattccatcatcc +agattgctggggctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctatggt +ccaagccacaagtggaaaacacagagga--------ggttaccaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcatttcatccgacgacattaaaactgagggtaagaaagggaagaaca +agactggtcgcggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtatgatgagtaca +agaggattagagaagagaggaatggcaagtattccatagaagagtacctccaggacagggacaaatac---t +atgaggaggtggccattgccagggcgaccgaggaagacttctgtgaagaggaggaggccaagatccggcaaa +ggatctttaggccaacaagaaaacaacgcaaggaggaaagagcttctctcggtttagtcacaggttctgaaa +ttaggaaaagaaacccagatgatttcaagcccaaggggaaactgtgggctgacgatgacagaagtgtggact +acaatgagaaactcagctttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtctccc-ccagtctgttcataacatcaacccatgtcataccccagggcgcaaaggagttcttt +ggagtccccatcaaacaaattcaggtacacaaatcaggcgaattctgtcgcttgagattcccaaaaccaatc +aggactgatgtgacgggtatgatcttagaagaaggtgcgcccgaaggcaccgtggtcacactactcataaaa +aggtctacaggagaactcatgcccctagcagctagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcagatgggcatgcttctgacaggatctaacgccaaaagcatggacctaggcaccacacca +ggtgattgcggctgtccctacatctacaagagaggaaatgactatgtggtcattggagtccacacggctgcc +gctcgtgggggaaacactgtcatatgtgccacccaggggagtgagggggaggctacacttgaaggtggtgac +agtaagggaacatactgtggtgcaccaatcctaggcccagggagtgccccaaaacttagcaccaagaccaaa +ttctggagatcgtccacagcaccactcccacctggcacctatgaaccagcctatcttggtggcaaggacccc +agggtcaagggtggcccttcattgcagcaagtcatgagggatcagttgaaaccatttacagagcccagggga +aagccaccaaagccaaatgtgttagaagctgccaagaaaaccatcatcaatgtccttgagcaaacaattgat +ccacctgagaaatggtcattcgcacaagcttgcgcgtccctcgacaagaccacttccagtggccatccgcac +cacatgcggaaaaacgactgctggaacggggaatccttcacaggcaagctggcagatcaggcttccaaggcc +aacctgatgttcgaagaagggaagaacatgaccccagtctacacaggtgcgcttaaggatgaattggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggatttagcgaccatgatccgatgt +gctcgagcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctatcagagttggtatg +aatatgaatgaggatggccccatcatattcgagaggcattccaggtacagatatcactatgatgctgattac +t-ctcggtgggattcaacacaacagagagctgtgttggcagcagctctagaaatcatgg-ttaaattctcct +cagaaccacattt-ggctcaggtagtcgcagaagaccttctttctcctagcgtggtggatgtgggtgacttc +acaatatcaatcaacgagggtctcccctctggggtgccctgcacctcccaatggaactccatcgcccactgg +cttctcactctctgtgcgctctctgaagttacaaatctgtcccctgacatcatacaggctaattccctcttc +tccttttatggtgatgacgaaatcgttagcacagacataaaattggacccagagaagttgacagcaaagctc +agggaatatgggctgaaaccaacccgccctgacaaaactgaagggccccttgttatctctgaagacttaaat +ggtctgactttcctgcggagaactgtgacccgcgacccagctggttggtttggaaaactggagcagagttca +atactcaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgattccacactcc +caaagacccatacagttgatgtccttactgggagaggccgcactccacggcccagcattctacagcaaaatc +agcaagttagtcattgcagagctaaaagaaggtggcatggatttttacgtgcccaggcaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccaacccatctga---tgggtccacagccaacctcgtcccagaggtcaacaatga +ggttatggctttggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatgtaattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtatcccctagaaacgctccagg +tgaaatactatggagcgcgcccttgggccctgatctgaatccctacctttctcatttggccagaatgtacaa +tggctatgcaggtggctttgaagtgcaggtaatccttgcggggaatgcgttcaccgc---cgggaaaatcat +atttgcagcagtcccaccaaatttcccaactgaaggcttgagccccagccaggtcactatgttcccccatat +aatagtagatgttaggcaactggaacctgtgttgatccccttacctgatgttaggaacaatttctatcacta +caaccaattaaatgac---cccaccattaaattgatagcaatgctgtacacaccacttagggctaataatgc +tggggaagatgtcttcacagtctcttgtcgagtcctcacgaggccatcccccgattttgatttcatattttt +ggtgccacccacagttgagtcaagaactaaaccattcaccgtcccaattttaactgttgaggaaatgaccaa +ttcaaga---ttccccattcctttggaaaagttgttcacgggtcctagcggtgcctttgttgttcaaccaca +aaatggcaggtgcacgactgatggcgtgctcttaggcactacccaactgtctcctgtcaacatctgcacctt +cagag-----------------------------------------gggatgtcacccaca----------- +-----------ttgcagg------------------------------------------------ta---- +-------ctcata----------------------------------attacaca----------------- +----------------atgaatttggcttctcaaaattggaacaattatgacccaacagaagaaatcccagc +ccctctggggaccccagatttcgtgggaaggatccaaggcatgctcacccaaa------------------- +-----ct-----acaaggggggatggctctacc--------cgc-----------ggccacaaagctacagt +gagcactggggatgtccacttcactccaaagctgggcagtattcagttcaaca---------ctgatacaaa +caatgattt---tgaaactggccaaaacacga---------------------------aattcaccccag- +--------tcggtgttgtccaggatggtaatggtacccaccaaaatgaaccccaacaatgggtgctcccaag +ctactcaggtaga-actggt------cataatgtacacctagcccccgccgtagcccccacttttccgggtg +agcaacttcttttcttcaggtccactatgcccg------gatgcagcgggta------cccca--------- +--acatgaatttggattgtctactcccccaggaatgggtgcagcacttctaccaagaggcagctccagcaca +atctgatgtggctctgctaagatttgtgaatccagacacaggtagggttctatttgagtgcaagcttcataa +atcaggctatgtcacagtggctcacactggccagcatgatttggttatcccccccaatggctactttagatt +tgattcctgggtcaaccaattctacacacttgcccccatgggaaatgggacggggcgtaga---------cg +tgcac---------tataatggctggagctttcttcgccgggctggcatctgatgtccttggctctggactt +ggttccctaatcagtgctgg---ggctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttcctttcaacatgataaagagatgctccaa +gcacaaattgaggccactaaaaagttgcaacagggtatgatggaagttaaacgggcaatgctcctagagggt +ggattctctgaaacagatgcatcccgtggggcaatcaacgcccccatgacaaaggctttggactggagcgga +acaaggtactgggctcctgacgctaggactacaacatacaatgcaggccgcttttccacccct--------- +ca---------------------accctcgggggcact---------------------------------g +ccaggaa----------------ggaccaatcccagggctgc------------------------------ +------------------------------tgtccccgctcggggcttctcc------------------ag +tgtacctt-----------ctaat------------acttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +ttggttc--------tacagctggttctggcaccagtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggagctggattgaggatca +aaacaggaatttgtcacctttcatga---ggggagctcacaacatatcgtttgtcaccccaccatctagtag +atcctct---agcc------------------------------aaggca---cagtctcaaccgtgcctaa +agaagttttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgtaagcgaggggagtcacg--------ggcgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----ta-----t------cttc-----------c-ct----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AY134748.1/1-7537 |Snow Mountain virus, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgctgtc------------aacagc +a------ac----aacgacaacgcaaaatcttcaagtgacg---------------gagtactatctagtat +ggctgtcacttttaaacgag----cccttggggcccggcctaaacagccg-cccccgagggaaataccacaa +agg---------------------cccccaaggccacccaccccagaactggtg-------aaaaagatccc +acc-----------------------------tcccccgcccaacgg------agaagacgaaccggtcgtt +cattatagtg----------ctaa---agatggcataactgggctgcccgaacttacaacagtgaggcagcc +agaagaggccgctacagcattcagcgtcccacccctcgaccagagagagaatagggacgctaaagagccatt +gaccggcaccatcttggagatgtgggatggcgagatttaccattatggcctatatgtggagcgagggctggt +gcttggcgtgcacaaaccaccagccgccatcagcctcgctaaagttgagttaacacctctatctttgtattg +gagaccagtgtacacccccc---agtacctcatcgctcctgacaccctcaggaaactgcacggggagttatt +tccatacacggcctttgataacaactgctatgccttctgctgctgggtgttggacttaaacgattcttggtt +gag---cagaaggatgatacagagaacaactggctttttcaggccttaccaagattggaataggaagcccct +ccccaccatggatgactccaagttgaagaaggtggccaacatacttttgtgtgccttgtcatcactattcac +tagacccatcaaggacataattgggaaactcaggcctctcaatatccttaacatcctggcttcttgtgattg +gactttcgcaggtatagtggaatctctaattctcctagctgaactcttc---ggagttttctggacaccccc +agatgtgtctgcgatgatcgcccccttactgggtgactacgagctgcaaggacccgaagatcttgctgtgga +acttgtaccgatagtaatgggggggataggattggtgttggggttcaccaaggaaaagattgggaagatgct +gtcatctgccgcttccaccctgaggacctgcaaagaccttggcgcctatgggctggaaattctgaaactggt +catgaaatggtttttcccaaagaaagaagaggcaaacgagcttgcgatggtgagggctattgaggacgcagt +cctagatctcgaggctattgagaacaaccatatgacagctctactcaaagacaaagatagcctcgcgacata +catgaggactcttgatttggaggaagaaaaggccagaaagctctccactaagtccgcttcacctgatatagt +gggcacgatcaacgccctgctggctagaattgccgctgctcgttcccttgtacacagggccaaggaagaact +gtccagcaggctaaggccagttgttgtgatgatatctggcaaacctggcatcgggaagacccatctggctag +agaattggcaaagaagatcgctataaccctttcaggagaccagagggtaggcctcatcccccgcaacggagt +cgaccactgggatgcttacaagggtgagagagtcgttctctgggacgattatgggatgagtaaccccgtcca +tgatgccctaagactccaagaacttgctgacacctgccctttgaccctaaactgtgacagaattgagaacaa +gggcaaggtctttgacagtgatgccataatcatcacaaccaacctggctaacccagctccacttgattatgt +caactttgaagcttg-ctccaggcgcattgacttccttgtgtatgccgatgcacctgacgttgagaaagcga +agcgcgacttcccgggacaacctgacatgtggaagagcgcttatagtcccgacttctcacacatcaagctaa +tgctggctccccagggtggttttgacaaaaatggcaacaccccacacgggaaaggtgtcatgaagaccctca +caacaggctccctcattgcccgtgcttcagggctcctccatgaacgattggatgaattcgaactacaaggac +ccaacctcacaactttcaactttgaccgtaataaaatacaggcttttaggcagcttgccgctgaaaacaaat +atggcctggtggacacaatgagagtgggtggacaactcaagggtgtcagaactataccagaactcaagcagg +ccctcaagaacatattaatcaaaaggtgccagatagtgtatggtggcagcacctatacacttgaatctgatg +gcaaagggaatgtgaaagtggaaaaagtgcaaaataccaacatccaaatcaacaacgagctagctggtgctt +tacaccacctccgatgcgctaggatcaggtactatgttaaatgtgttcaggaggctctatattccatcatcc +aaattgctggggccgcgtttgtaaccacgcgcattgtgaagcgcatga------acatacaaaacttgtggt +caaggcctccagtaggagatgcggagga--------ggtcactagccaggatggttgcccaaagcccaaa-- +-gat----gatgagg---agttcgtcatctcgtctagtgacatcacgcctgaaggcaagaaaggaaagaaca +agactggccgcggcaagaaacacacagccttctcgagcaagggtctcagtgatgaggagtacgatgagtaca +aaagaatcagggaagaaaggaatggtaagtactccatagaagaataccttcaggacagagacaagtat---t +atgaggaagtggccatagccagggcaactgaggaagacttctgtgaggaagaagaagccaagatccgacaga +ggatatttaggccaacgaggaagcaacgcaaggaggagagggcttcccttggccttgtcactggctcagaga +tcagaaagagaaacccagacgacttcaaacctaaaggaaagctgtgggctgatgatgaaagggtcgttgact +ataatgagaaactcagttttgaggcccccccgagcatctggtcaaggatagtcaactttgggtcaggatggg +ggttctgggtgtccc-ctagcctgtttattacatcaacccatgttataccccaaggcactcaggaattcttt +ggtgtacccatcaagcagattcagattcacaaatcaggggagttctgccgcctgagattccctaaatcaatc +agaactgctgtaacaggcatgatcctagaagagggggccccagaaggaaccgtggtctcactactcatcaag +agaccaaccggtgagctcatgcccctggcagccagaatgggcacccatgcgactatgaaaatccaaggtcgc +acggttggaggtcagatgggtatgttgctaacagggtccaatgctaaaagcatggatttgggcacgacacct +ggtgactgtggctgcccctatatttataagagaggcaatgactacgtggtcatcggcgtgcacacagccgct +gctcgcggaggtaacactgtcatctgtgcaacccagggcagtgaaggtgaggccacgctcgaaggcggtgat +aacaaaggcacctactgtggagctccaatactaggccctggtaacgctcccaagctcagcaccaagactaaa +ttctggaggtcctccacagtgccactcccacccgggacctatgaaccagcttacttaggtggcaaggacccc +agggtgaagggtggaccttcactacaacaagtcatgagagaccagctaaaaccattcactgagcctaggggc +aaaccacccaagccaagtgtgctggaagctgccaagaagaccattatcaatgtgttggagcaaacaatagat +cccccccaaaaatggtcattttcacaagcatgtgcgtcgcttgataaaaccacctccagcggccacccccac +cacatacggaagaacgattgctggaatggggagtcttttacaggaaaattggcagatcaagcatcaaaagct +aacctaatgtatgaggaaggaaagaacatgaccccagtctacacaggggccctcaaggatgagctggtcaag +actgacaagatctatgggcagatcaagaaaaggcttctttggggctctgacttggcaacaatgatccgttgt +gcgcgggcgtttggagggttaatggatgagctcaaggcccattgcgtaacactccctgtcagggttgggatg +aacatgaatgaggatggacccataatttttgaaaagcactccaggttctcataccactatgatgcagattac +t-cacgctgggactcaacccaacagagggcagtgctagctgcagccttggaaatcatgg-taaaattctcac +cagaaccacattt-ggcccaaattgttgcagaggatctcctagcccccagtgtgatggatgtaggtgatttc +aaaataacaattaatgagggactgccctcgggagtaccctgcacatcacagtggaattccatcgcccactgg +ctcctcacactctgcgcactatctgaagtcacaaacctggctcctgacatcatacaagctaactccttgttc +tctttctatggtgatgatgaaatcgtaagtactgacataaaattagacccagagaaactcacagcaaaactc +aaagaatacggactcaaaccaacccgcccggacaaaactgaaggacccctgatcatatccgaggacttgaat +ggtttgacctttctgcggcggaccgtgacccgtgatccagctgggtggtttggcaagttggaccagagttca +attctcaggcagatatactggactaggggccccaaccatgaggacccgtccgaaacaatgataccacactcc +cagaggcctatacagctgatgtctcttttgggtgaagcagccttgcatggtccaacattttacaccaaaatc +agtaaactggtcatcacagagctgaaggaaggtggcatggatttttacgtgcccagacaggaacccatgttc +aggtggatgagattctcagatttgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgaatgacgccgctccatctac---tgatggtgcagccggcctcgtgccagaaagtaataatga +ggtcatggctcttgagcccgtggctggtgctgccttggcagccccggtcaccggtcaaacaaatattataga +cccttggattagagcaaattttgtccaggcccctaatggtgaatttacagtttctccccgtaatgcccctgg +tgaagtgctattaaatctagaattgggtccagaattaaatccttatctggcacatttagcaagaatgtacaa +cgggtatgccggtgggatggaggtgcaggtcatgctagctgggaacgcgttcacagc---tggcaaattggt +cttcgctgctgtaccacctcatttcccggttgaaaaccttagtccacagcaaattaccatgttccctcatgt +gattatagatgttaggactttggaacctgttttattgccactccccgatgttagaaataatttcttccatta +taatcaaaaagatgat---cctaagatgagaattgtggctatgctttatactcccctcaggtccaatggttc +tggtgatgatgtgttcacagtctcttgcagggtgttgactagaccctcccctgattttgattttacatacct +ggtaccaccaacagtggaatccaaaacaaaaccattcacccttccaattcttacacttggggagctttccaa +ttctaga---tttccagtgtccatagatcagatgtacactagccccaatgaagtcatatctgtgcagtgcca +gaatggaaggtgcacactggatggggagctccaaggaacaacacagctccaagttagtggcatttgtgcatt +caaag-----------------------------------------gagaagtgaccgctcac--------- +-----------ttgcagga--------------------------------------------caatg---- +-------atcacc----------------------------------tatacaac----------------- +----------------atcaccatcacaaacttgaatgggtccccttttgatccctctgaggacatccccgc +ccccctgggtgtgcccgactttcagggaagagtctttggtgtcatcactcaaa---gagacaa--------- +-----ac-----agaatgccgctgggcaaagcc--------agccggcaaacaggggacacgatgctgtggt +ccccacttacacagcccagtataccccaaaattgggtcaggttcaaattggca---------catggcagac +cgacgatct---taaagtcaaccaaccagtca---------------------------aattcaccccag- +--------tcggtctca---------atgacac---------agaacatttcaatcagtgggtggtccctag +gtacgctggtgct-ttaaat------ctaaacacaaatcttgccccctctgttgctccagtgtttccagggg +agcgtctgctcttctttagatcatacctccccc------ttaagggtggtta------tggaa--------- +--acccagctattgattgcctgctaccacaagagtgggtgcagcatttttatcaggaagcagccccctcaat +gagtgaggtagcccttgtcagatacatcaatccggacactggccgggcgctgtttgaggccaaactccacag +agctggtttcatgacagtctcgagtaacaccagtgctccggtggttgtgcctgccaacggatacttcagatt +tgactcttgggtgaaccaattttattctcttgcccccatgggaactggaaatgggcgtaga---------ag +gattc---------agtgatggctggagcttttgtagctggtctcgcgggggatgtgctcagcaatgggctc +agctcactaattaatgcagg---tgctaatgcaataaatcagagagcagaatttgattttaatcagaaa--- +------------------------------ttacagcaaaattcttttaatcatgataaggagatgttgcag +gctcagattcaggcaactaagcagctgcaggcagacatgatggctataaagcagggggttctgaccgctggc +ggcttttcccctactgatgcagccagaggcgctgtgaacgcgcccatgacacaggcgctggattggaatggc +acaaggtattgggcaccaggctccatgaggactacatcctactctgggaggtt------------------- +-----------------------cacatcgaccgcccc---------------------------------g +gcaaggc----------------aggccgatct--------------------------------------- +------------------------------tcaacacactcaaaatcggccttcg---------------ag +tggctctt-----------ctgtg------------tcctcttatgccactcaat----------------- +----------cttcaa-----gaccaactct------aaccacaaccac----------aggg--tcctcac +atagtac--------aacctcatccaattcgacccgtagcacaaacctttcccagtcgacggtctctagggc +tgcatc---------------------------------------caggactagtgagtgggttagagatca +aaatagaaatttggaaccctacatgc---atggtgccttacagacagcctttgtcaccccaccttccagcag +ggcatct---gac---------------------------------ggga---cagtctcaaccgtccccaa +aggtgttttgga-ctcctggacacctgcgt------------tcaacacccgcaggcagccgctttttgcac +acctccgtaagaggggggagtcaca--------agcttag--t-----------gaaaaggtga-------- +---a-a-aat-ttactt---ta---------------------------------aatgaa---t-tgatt- +---------------ct---acctttt--------------------------------------------- +------------------------------------------------------------------------ +- +>AY032605.1/1-7556 |Human calicivirus Hu/NLV/GII/MD145-12/1987/US, complete genome +----gtgaatgaagat---ggcgtctaac-gacgcttccgctgccgctgttgcc------------aacagc +a------ac----aacgacaccgcaaaatcttcaagtgacg---------------gagtgctttctagcat +ggctatcacttttaaacgag----ccctcggggcgcggcctaaacagcct-cccccgagggaaatactacaa +aga---------------------cccccacgaccacctaccccagaactggtc-------aaaaagatccc +ccc-----------------------------tcccccgcccaacgg------ggaggatgaactagtggtt +tcttatagtg----------tcaa---agatggcgtttccggtctgcctgagctttccactgtcaggcaacc +ggatgaagccaatacggccttcagtgttcccccactcaatcagagggagaatagggatgccaaggagccact +aactggaacaattctggaaatgtgggatggagagatctaccattacggcctatatgtggagcgaggtcttgt +acttggtgtgcacaaaccaccagctgccatcagcctcgccaaggtcgaactaacaccactctccttgttctg +gagacctgtatacactcccc---agtatctcatctccccagacactctcaagagattgcacggagaatcgtt +cccctatacagccttcgacaacaattgctatgccttctgttgctgggtcttagacctaaacgactcgtggct +gag---taggagaacgatccagagaacaactggtttctttagaccctatcaagactggaataggaaacccct +ccctactgtggatgactccaaattaaagaaggtagctaacttattcctgtgtgctctatcttcactattcac +caggcccatcaaagacataatagggaaactaagacctctcaacatcctcaacatcttggcctcatgtgattg +gactttcgcaggcatagtggaatccttgatactcatggcagagctcttt---ggagttttctggacgccccc +agatgtgtctgcgatgattgcccccttgctaggtgattacgagttacaagggcctgaggaccttgcagtgga +actcgttcctatagtgatggggggaattggtttggtgctaggatttaccaaagagaagattgggaagatgtt +gtcatctgctgcatccaccttaagagcttgtaaagatcttggtgcatacgggctggaaatcctaaaattagt +catgaagtggttcttcccaaagaaagaggaagcaaatgagctggctatggtgagatccatcgaggatgcggt +gctggacctcgaggcaattgaaaacaaccatatgaccagcctgctcaaagacaaagacagtctggcaaccta +catgagaacccttgaccttgaggaggagaaagccaggaagctctcaaccaagtctgcttcacctgatatcgt +gggtacaatcaacgcccttctggcaagaatcgctgctgcacgttccctggtgcatcgagcgaaggaggagct +ttccagcagaccaagacccgttgtcgtgatgatatcaggcagaccagggatagggaagacccaccttgccag +ggaactggccaagagaatcgcagcctccctcacaggagaccagcgtgtaggtctcatcccacgcaatggcgt +cgaccactgggacgcatacaagggggagagggtcgtcctatgggacgactatggaatgagtaatcccatcca +tgatgccctcaggttacaagaactcgctgacacttgccccctcactctaaactgtgacaggattgagaacaa +aggaaaggtctttgacagtgatgccataatcatcaccactaatctggccaacccagcaccactggactacgt +caactttgaggcatg-ctcgaggcgcatcgatttcctcgtgtatgcagatgcccctgaagtcgagaaggcga +aacgtgattttccaggccaacctgacatgtggaagaacgctttcagtcctgatttctcgcacataaaactaa +cgctggctccacagggtggcttcgacaagaatggaaacaccccacatgggaagggcgtcatgaagactctca +ccactggctccctcattgcccgggcatcagggctactccatgagaggttagatgagtatgagctacagggcc +caactctcaccactttcaactttgatcgcaacaaggtgcttgcttttaggcagcttgctgctgaaaacaaat +acgggctgatggacacaatgaaagttggaagacagctcaaggatgtcagaaccatgccagagcttaaacaag +cactcaagaatatctcaatcaagaggtgccagatagtgtacagtggttgcacctatacacttgagtctgatg +gcaagggcagtgtgaaagttgacagagttcagagcgccaccgtgcagaccaataacgagctggccggcgccc +tacaccatctaaggtgcgccagaattaggtactatgtcaagtgtgtccaggaggccctatattccatcatcc +aaattgctggagctgcatttgtcaccacgcgcatcgtcaagcgcatga------acatacaagacctctggt +ccaagccacaagtggaagacacagagga--------gactatcaacaaggacgggtgcccaaaacccaaa-- +-gat----gatgagg---agttcgtcgtctcatctgacgacatcaaaactgagggcaagaaagggaagaaca +agactggccgtggcaagaagcacacagccttctcaagcaaaggtctcagtgatgaagagtacgatgagtaca +agagaatcagagaagaaagaaacggcaagtactccatagaagagtaccttcaggacagggacaagtac---t +atgaggaggtggccattgccagggcgaccgaagaggacttctgtgaagaggaggaggccaagattcggcaga +ggattttcaggccaacaaggaaacaacgcaaggaggagagggcctctctcggtttagtcacaggctctgaaa +tcaggaagaggaacccagatgatttcaagcccaagggaaaactgtgggctgatgatgacaggagtgtagact +acaatgagagactcagttttgaggccccaccaagcatctggtcgaggatagtcaactttggttcaggttggg +gcttctgggtttctc-ccagcctgttcataacatcaactcatgtcataccccagggcgcacaggagttcttt +ggagtccccatcaagcaaattcagatacacaaatcgggcgaattctgtcgcttgaggttcccaaaaccaatc +aggactgatgtgacgggcatgatcttagaagaaggtgcgcccgaaggtaccgtggccaccctactcatcaag +aggcctactggagaacttatgcccttagcagccagaatggggacccatgcaaccatgaaaattcaagggcgc +actgttggaggtcaaatgggcatgcttctgacaggatccaacgccaaaagcatggttctaggcaccacacca +ggtgactgcggctgcccctacatctacaagagggagaatgactacgtggttattggagtccacacggctgcc +gctcgtggggggaacactgtcatatgtgccacccaggggagtgagggagaggctacacttgaaggcggtgac +agtaagggaacctactgtggtgcaccaatcctaggcccaggaagtgccccaaaactcagcaccaagactaaa +ttctggagatcatctacaacaccactcccacctggcacctatgaaccagcctaccttggtggtaaggacccc +agagtcaagggtggcccttcattgcaacaagtcatgagggatcagctgaaaccatttacagagcccaggggc +aaaccaccaaagccaagtgtgttggaggctgccaagaaaaccatcatcaatgtccttgaacaaacaattgat +ccacctcagaagtggtcattcacgcaagcttgcgcgtccctcgacaagactacttccagtggccatccgcac +cacatacggaaaaacgactgctggaacggggaatccttcacaggcaagttggcagaccaggcttccaaggcc +aacctgatgttcgaagaggggaagaacatgaccccggtctacacaggtgcgcttaaggatgagttggtcaaa +actgacaaaatttatggtaagatcaagaagaggcttctctggggctcggacttagcgaccatgatccggtgc +gctcgggcattcggaggcctaatggatgaactcaaagcacactgtgttacacttcctgtcagagttggtatg +aatatgaatgaggatggccccatcatcttcgagaggcattccaggtataaatatcactatgatgctgattac +t-ctcggtgggattcaacgcaacagagagccgtattagcagcagccctagaaatcatgg-ttaaattctccc +cagaaccacatct-ggcccagatagttgcagaagaccttctctctcctagtgtgatggatgtgggtgacttc +aaaatatcaatcaatgagggtctcccctctggggtgccctgcacctcccaatggaattccatcgcccactgg +ctcctcactctctgtgcactctctgaagtcacaaacctgtcccctgatatcatacaggctaattccctcttc +tccttttatggcgatgatgaaattgtcagtacagatataaagttggacccagagaaattgacagcaaaactc +aaggaatacgggttgaaaccaacccgccctgacaaaactgaaggaccccttactatctctgaagacttgaat +ggtctgaccttcctgcggagaactgtgacccgcgacccagctggctggtttggaaaattggaacagagttca +atacttaggcaaatgtactggactaggggccccaaccatgaagacccatctgaaacaatgataccacactcc +caaagacccatacaattaatgtccctactgggcgaggccgcactccacggcccagcattctacagcaaaatt +agcaagctagtcattgcagagctgaaggaaggtggcatggatttttacgtgcccagacaagagccaatgttc +agatggatgagattctcagatctgagcacgtgggagggcgatcgcaatctggctcccagttttgtgaatgaa +gatggcgtcgagtgacgccaacccatctga---tgggtccgcagccaacctcgtcccagaggtcaacaatga +ggttatggctctggagcccgttgttggtgccgctattgcggcacctgtagcgggccaacaaaatataattga +cccctggattagaaataattttgtacaagcccctggtggagagtttacagtgtcccctagaaacgctccagg +tgagatactatggagcgcgcccttgggccctgatttgaacccctatctttctcatttgtccagaatgtacaa +tggttatgcaggcggtttcgaagtgcaagtaatcctcgcggggaacgcgttcaccgc---cgggaaagttat +atttgcagcagttccaccaaactttccaactgaaggcttaagccccagccaggttactatgttcccccatat +aattgtagatgttaggcaattggaacctgtgttgatccccctacctgatgttaggaataatttctatcatta +caatcaatcacatgat---tctacccttaagttgatagcaatgttgtatacaccactcagggctaataatgc +cggggacgatgtcttcacagtctcttgtcgagttctcacgaggccatcccccgattttgatttcatattctt +ggtgccacccacagttgaatcaagaactaaaccattcaccgtcccaatcttaactgttgaggaaatgtccaa +ttcaaga---ttccccattcctttggaaaagttgtacacgggtcctagcagtgcttttgttgtccaaccaca +aaatggcagatgcacgactgatggcgtgctcttaggtactacccagctgtcagctgtcaacatctgtaactt +taggg-----------------------------------------gggatgtcacccata----------- +-----------ttgtggg------------------------------------------------ca---- +-------gccatg----------------------------------attataca----------------- +----------------atgaatctggcttcccaaaattggagcaattatgacccaacagaagaaatcccagc +ccccctgggaacaccagattttgtggggaagatccaaggcctgctcacccaga------------------- +-----cc-----acaagagcggatggctcgacc--------cgt-----------gcccacaaagctacagt +gagcactgggagtgtccacttcactccaaagctgggtagtgttcaattcacca---------ctgacacaaa +caatgattt---ccaaactggccaaaacacga---------------------------aattcaccccag- +--------ttggcgtcatccaggacggtgatca---ccatcagaatgagccccaacaatgggtactcccaaa +ttactcaggtaga-actggt------cataatgtgcacctggcccctgccgttgcccccacttttccgggtg +agcaactccttttctttagatccactatgcccg------gatgtagcgggta------tccca--------- +--acatgaatttggattgcctactcccccaggaatgggtgctgcacttctaccaggaagcagctccagcaca +atccgatgtggctctgctgagatttgtgaatccagacacaggtagggttctgtttgagtgcaagctccataa +atcaggctatatcacagtggctcacaccggcccgtatgacttggttatcccccccaatggttattttagatt +tgattcctgggtcaaccagttctacacacttgcccccatgggaaatggaacggggcgcagg---------cg +tgcat---------tataatggctggatctttctttgctggattggcatctgatgtcctcggctctggactt +ggttctctaatcaatgctgg---agctggggccatcaaccaaaaagttgaatttgaaaataacagaaaattg +caacaagcttccttccaatttagtagcaatctacaacaggcttccttccaacatgataaagagatgctccaa +gcacaaattgaggctactcaaaaattgcaacaggatctgatgaaggttaaacaggcagtgctcctagagggt +ggattttccacaacagatgcagcccgtggggcaatcaacgcccccatgacaaaggctctggactggagcgga +acaaggtactgggcccctgatgccaggaccacaacatacaatgcaggccgcttttccaccctt--------- +ca---------------------gccttcgggggcact---------------------------------g +ccaggaa----------------gaactaatcctaggattac------------------------------ +------------------------------cgtccccgctcggggccccccc------------------ag +cacacttt-----------ctaat------------gcttctactgctactt-------------------- +----------ctgtgt-----attcaaatca------aactgtttcaac----------gag--------ac +taggttc--------ttcagctggttctggtaccggtgtctcgagtctcccgt------------------c +aactgc---------------------------------------aaggactaggaactgggttgaggacca +aaacaggaatttgtcacctttcatga---ggggggctctcaacacatcattcgtcacccctccatctagtag +atcctct---aacc------------------------------aaggca---cagtctcaaccgtgcctaa +agaaattttgga-ctcctggactggcgctt------------tcaacacgcgcaggcagcctctcttcgctc +acattcgcaaacgaggggagtcacg--------ggtgtaatgt-----------gaaaagac-a-------- +---a-a-a-t-tgat-----tt-----t------ctttc------------tc----t--------tcttt- +-------a-------gt---gtctttt--------------------------------------------- +------------------------------------------------------------------------ +- diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_entropy.json b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_entropy.json new file mode 100644 index 0000000..5daba61 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_entropy.json @@ -0,0 +1,8524 @@ +{ + "0": 0.17677214741128186, + "1": 0.11093172502334706, + "2": 0.3744336300537403, + "3": 0.10654585929907893, + "4": 0.14839226118067525, + "5": 0.045558209933214404, + "6": 0.02658760698971869, + "7": 0.06935478159587867, + "8": 0.06844168855157329, + "9": 0.09332599962614871, + "10": 0.07037384693286675, + "11": 0.09705349368056666, + "12": -0.0, + "13": -0.0, + "14": -0.0, + "15": 0.06149830830895857, + "16": 0.027723613440167737, + "17": 0.0646801625809657, + "18": 0.20277632623232586, + "19": 0.03677901854277264, + "20": 0.016528105561108133, + "21": 0.04706105740754592, + "22": 0.026613465939655412, + "23": 0.06762955551046997, + "24": 0.12470774701031963, + "25": -0.0, + "26": 0.005572721568406589, + "27": 0.08955235470342662, + "28": 0.005542308371168683, + "29": 0.010188353097016226, + "30": 0.024113881775993128, + "31": 0.0335541205906428, + "32": 0.9410823893326794, + "33": 0.16957194675065523, + "34": 0.17738001189321148, + "35": 0.33686274520519, + "36": 0.7664580222573196, + "37": 0.05652459308466933, + "38": 0.02006712955159863, + "39": 0.028976163198551966, + "40": 0.12676073703120935, + "41": 0.6510608275066325, + "42": 0.983273910268607, + "43": 0.13188160594688927, + "44": 0.004950069719932481, + "45": 1.3882588116344237, + "46": 0.5185902561656804, + "47": 1.216613562554517, + "48": 1.1642596993587808, + "49": 1.018761249159937, + "50": 1.0877681426763315, + "51": 0.27968490679797375, + "52": 0.37362731432131463, + "53": 0.7219280948873623, + "54": -0.0, + "55": -0.0, + "56": 0.031172380687192587, + "57": 0.574118310670838, + "58": 0.44836093303909463, + "59": 0.624195692985225, + "60": 0.0989590953557431, + "61": 0.9976161146077624, + "62": 0.552441530569846, + "63": 0.6724660015438056, + "64": 0.33225954398483887, + "65": 0.059393982275806695, + "66": 0.9947663780014402, + "67": 0.5359814859154761, + "68": 0.5410081777492036, + "69": 1.2036908806058488, + "70": 0.6394571324851641, + "71": -0.0, + "72": -0.0, + "73": 0.38431154412649704, + "74": -0.0, + "75": 0.04809259847190645, + "76": 0.03281257879686332, + "77": -0.0, + "78": -0.0, + "79": -0.0, + "80": -0.0, + "81": 0.0926115690202363, + "82": 0.5120918409080865, + "83": 0.48699074923747254, + "84": 0.5843499264544538, + "85": 0.5050357512082199, + "86": 0.2687721355528742, + "87": 0.14321945379646195, + "88": 1.4783557511089565, + "89": 1.2861590179169962, + "90": 0.43544771947068595, + "91": 1.0458064478152302, + "92": 0.6411048699675029, + "93": 0.2825321489072646, + "94": 0.5499543935535885, + "95": 0.6366535428635473, + "96": 0.5850469650989093, + "97": 0.05552087617002163, + "98": 0.09535089779756921, + "99": 0.14639540413053861, + "100": 0.025198018649853035, + "101": 0.7154267476433842, + "102": 0.8993638697576457, + "103": 0.6354506225092883, + "104": 0.35948987472682087, + "105": 0.5376540276217648, + "106": 0.0773701780257924, + "107": 1.0923723469840296, + "108": 0.8577725854597974, + "109": 0.14932253864817072, + "110": 0.26984809171053886, + "111": 0.08168767019691561, + "112": 0.14890238277731457, + "113": 0.13962666728181466, + "114": 0.1935324672508298, + "115": 0.669204102622427, + "116": -0.0, + "117": -0.0, + "118": -0.0, + "119": -0.0, + "120": -0.0, + "121": -0.0, + "122": 0.2958859708537865, + "123": 0.19342684235935365, + "124": 0.6994809387058171, + "125": 1.609911030954272, + "126": 1.6105317269377157, + "127": 0.49902792853788347, + "128": 1.0651230127637719, + "129": 0.7428968585579386, + "130": -0.0, + "131": 1.231727738780742, + "132": 1.1802867689906944, + "133": 0.26961299764964863, + "134": 1.3315696906085028, + "135": 0.012490175335112137, + "136": 0.8679000635403532, + "137": 0.8661043710777477, + "138": 0.09958135101755541, + "139": -0.0, + "140": 0.6005996105332941, + "141": 1.3752076661996187, + "142": 0.5091611849163354, + "143": 0.6978748882327442, + "144": 0.8150393539962444, + "145": 0.7774123310193279, + "146": 0.6137526287771344, + "147": 0.5961593119580417, + "148": 0.5445966822163596, + "149": 1.1664203051378201, + "150": 0.44871094874763817, + "151": -0.0, + "152": 1.1300167995984065, + "153": -0.0, + "154": 0.015937072338595128, + "155": 0.9909970967659751, + "156": 0.9902717936498908, + "157": 0.9786332652687252, + "158": 0.6744084742292561, + "159": 0.5118283924869653, + "160": -0.0, + "161": -0.0, + "162": -0.0, + "163": -0.0, + "164": 0.4978544433251947, + "165": 0.6005053724839925, + "166": 0.04258944093997091, + "167": 0.01340417456916912, + "168": 0.6729952422285301, + "169": 0.008691931080257113, + "170": -0.0, + "171": 0.5146848523395495, + "172": 0.03302007206056826, + "173": 0.03968918345516224, + "174": 1.4009119548110822, + "175": 1.1677503372993614, + "176": 0.527831296925998, + "177": 0.6296805438590031, + "178": 0.46673136689022915, + "179": 0.17852994778873493, + "180": 1.0489236109335196, + "181": 0.013391192914703209, + "182": 0.028701122815334414, + "183": 0.5161467569168587, + "184": 0.5871472787262711, + "185": 0.5001958626004055, + "186": 0.8754719632314617, + "187": 0.6552860861102675, + "188": 0.04592558611027642, + "189": 1.6463420199198853, + "190": 0.8841837197791889, + "191": 0.8921285209683484, + "192": 0.08776388012336195, + "193": 0.026493288672845245, + "194": 0.035210674419968904, + "195": 0.04172367260605174, + "196": 0.12343235447132755, + "197": 0.5090869792013154, + "198": 0.667133954391074, + "199": 1.0431434142833107, + "200": 0.1777931308919678, + "201": 0.21224647428990634, + "202": 1.1744543335756386, + "203": 0.5829378363662896, + "204": 1.564629407878513, + "205": 0.6034812560899206, + "206": 1.241050760277772, + "207": 0.5414971903249328, + "208": 0.30517559566978275, + "209": 0.07708138233005998, + "210": 0.961282257932923, + "211": 0.9418136506457213, + "212": 0.12171765014234455, + "213": 1.3450025821102665, + "214": 1.3517094014020696, + "215": 1.4137474365414933, + "216": 1.1185939092769401, + "217": 1.3236868800506363, + "218": 1.0318877500033814, + "219": 1.0021290913727008, + "220": 0.6593758812786992, + "221": 0.7592757847892833, + "222": 1.3512332756451952, + "223": -0.0, + "224": 0.9268190639645772, + "225": 0.7424875695421236, + "226": 0.5916727785823275, + "227": 1.2467052127325733, + "228": 0.7024665512903903, + "229": -0.0, + "230": -0.0, + "231": 0.4537163391869448, + "232": -0.0, + "233": 0.49715018363696706, + "234": 0.24988229283318544, + "235": 0.20405611985266403, + "236": 0.45394214185549586, + "237": 0.07053055187063292, + "238": 1.0007337953566693, + "239": 0.6369170316866224, + "240": 0.15344098525991834, + "241": 0.7741056280335464, + "242": 1.2248584335337833, + "243": 0.5967784851734026, + "244": 0.7849711554802852, + "245": 0.1771216291121419, + "246": 0.06758783899881503, + "247": 0.740920846951082, + "248": 0.20308613521049876, + "249": 0.6350765613079559, + "250": 1.8149375781578292, + "251": 0.1468722460310694, + "252": 0.5639608160184179, + "253": 1.4783921122388481, + "254": 0.49887432844318125, + "255": 0.555956968711907, + "256": 1.2539251116646626, + "257": 0.08711353028074834, + "258": 0.11956112038740282, + "259": 1.32700626702718, + "260": 1.0638229711734037, + "261": 0.5468908031834887, + "262": 0.30368174979315865, + "263": 0.37577520741138776, + "264": 0.6845850172997737, + "265": 1.1469965642204312, + "266": 1.2792261515988463, + "267": 0.31143127008503924, + "268": 0.1920356333325529, + "269": 0.8723551610390146, + "270": 0.17738945318599736, + "271": 0.1735735793290623, + "272": 0.7483043067409402, + "273": 0.6476273990811197, + "274": 0.6537741501605416, + "275": 1.0282711296400546, + "276": 0.4041760535916428, + "277": 1.4861088715193727, + "278": 1.3860283229311605, + "279": 0.43628861291287707, + "280": 0.04787975285769642, + "281": 1.5245032505149414, + "282": 0.008606090431890036, + "283": 0.004664089204053073, + "284": 1.233712918325377, + "285": 0.05803060223837471, + "286": 0.059856629819820574, + "287": 1.1851490029117324, + "288": 0.1654270339962668, + "289": -0.0, + "290": 0.1654270339962668, + "291": -0.0, + "292": 0.15935006268563445, + "293": 1.5269114826079095, + "294": -0.0, + "295": -0.0, + "296": -0.0, + "297": -0.0, + "298": -0.0, + "299": -0.0, + "300": 1.0, + "301": 1.0, + "302": 1.0, + "303": -0.0, + "304": 1.0, + "305": -0.0, + "306": 1.0, + "307": -0.0, + "308": -0.0, + "309": -0.0, + "310": 1.0, + "311": -0.0, + "312": 0.9182958340544896, + "313": 0.9182958340544896, + "314": -0.0, + "315": 0.4262286569981449, + "316": 0.8616611489807388, + "317": 0.49798601433560985, + "318": 0.4905209985595808, + "319": 1.3627624662024356, + "320": 0.02834878901692924, + "321": 0.02079863975264392, + "322": 1.3059642558611073, + "323": 0.03940261443751633, + "324": 0.016852187302787442, + "325": 1.2986140833318447, + "326": 0.013199611374199647, + "327": 0.004641696259722922, + "328": 0.9918767488843137, + "329": 0.004641696259722922, + "330": 0.1428419434099794, + "331": 0.45921594044113345, + "332": 0.06771903441463775, + "333": 0.12612777352149762, + "334": 0.19188226068105313, + "335": 0.057379878265390864, + "336": 0.2733227748775589, + "337": 1.7160530129719596, + "338": 0.020655068206152413, + "339": 0.16721624494152726, + "340": 0.9284079359368648, + "341": 0.07876830442695629, + "342": 0.0880158236111126, + "343": 1.4571521566531718, + "344": 0.14707502000223366, + "345": 0.2015100637828246, + "346": 0.6255624383188695, + "347": 1.4116656632164781, + "348": 0.99542505273883, + "349": 0.2955933927492662, + "350": 0.7190187173516663, + "351": 0.9799818979749959, + "352": 1.261747300160913, + "353": 0.9471173806110569, + "354": 0.1582449554057605, + "355": 1.6428373008391013, + "356": 1.5942785522630643, + "357": 1.6646318923306271, + "358": 1.310736860549928, + "359": 0.14810496973793535, + "360": 0.717561286783742, + "361": 0.9379027892870727, + "362": 0.9148672652482485, + "363": 1.0152733642867116, + "364": 1.644499213363738, + "365": 0.32354943226958444, + "366": -0.0, + "367": -0.0, + "368": -0.0, + "369": -0.0, + "370": -0.0, + "371": -0.0, + "372": -0.0, + "373": -0.0, + "374": -0.0, + "375": -0.0, + "376": 1.1590882857230524, + "377": 1.6267933109530537, + "378": 0.5372331733521675, + "379": 0.59843052689559, + "380": 0.7446763041562435, + "381": 0.2951624433768, + "382": 0.29644231067372845, + "383": 1.033368007575119, + "384": 0.7880230457309354, + "385": 0.8423799369567397, + "386": 1.2105163648899246, + "387": 0.5455597435703454, + "388": 0.6108688512762444, + "389": 1.7468052599985366, + "390": 0.8702643707692536, + "391": 0.008530085792975673, + "392": 1.6609714599089518, + "393": 0.7606796029175028, + "394": 0.742644592275724, + "395": 1.0969757747614204, + "396": -0.0, + "397": -0.0, + "398": 1.938300887546398, + "399": 1.1393198475624648, + "400": -0.0, + "401": 0.8712264171929791, + "402": -0.0, + "403": 0.004623944553722773, + "404": 1.4279138822817787, + "405": 0.18220198230285456, + "406": 0.1589679397783301, + "407": 1.3842238702856424, + "408": 0.6255413532536112, + "409": 0.004622471708338492, + "410": 1.7215805352753302, + "411": 1.0328048591123078, + "412": 0.04741599796393033, + "413": 1.3054990735188141, + "414": 0.024847007991510704, + "415": 0.016772742491010774, + "416": 1.896929776754381, + "417": 0.013141184796006612, + "418": 0.034280386319742936, + "419": 0.86625059910664, + "420": 1.4531363548322704, + "421": 1.397543068813123, + "422": 1.7424237801356472, + "423": 0.18476513622430946, + "424": 0.17670656042621216, + "425": 0.6357368965460548, + "426": 0.6242273853613765, + "427": 0.7016743871333008, + "428": 1.2724094994099429, + "429": 0.2635965639945426, + "430": 0.35338762967375903, + "431": 1.4696918362469458, + "432": 0.6395036287610167, + "433": 1.257385752008442, + "434": 1.4507641985847128, + "435": 1.7079339627269567, + "436": 1.0456723914598665, + "437": 1.2886153229609085, + "438": 0.41031706027428383, + "439": 0.33806438979858777, + "440": 0.8541003582466518, + "441": 0.05317317932775902, + "442": 0.03428452436568602, + "443": 1.3877762239288314, + "444": 0.4976213862595189, + "445": 0.013132882774851883, + "446": 1.829306049925227, + "447": 0.008513983699429406, + "448": 0.7404343383975311, + "449": 0.6647963569158347, + "450": 0.0607635474379646, + "451": 0.5041023390439933, + "452": 0.6125230939429673, + "453": 0.04549667231460828, + "454": 0.015590233562944023, + "455": 1.1071047894434494, + "456": -0.0, + "457": -0.0, + "458": 1.547557667251172, + "459": -0.0, + "460": 0.004613655382297695, + "461": 0.971662654964611, + "462": 0.5148087262366959, + "463": 0.01312459184346675, + "464": 1.6258080976695883, + "465": 0.1833788127270922, + "466": 1.0032363842596264, + "467": 0.9853883213395784, + "468": 1.2185431302752348, + "469": 0.7751176506935045, + "470": 0.8415810888212996, + "471": 0.017021872789858842, + "472": -0.0, + "473": 0.9013535668349641, + "474": 0.00922712589001113, + "475": -0.0, + "476": 0.9559694926585698, + "477": 0.8915726324095166, + "478": 1.0101875752314236, + "479": 1.0832805580524574, + "480": 0.4584648695115464, + "481": 0.31939161866723065, + "482": 1.356745168005276, + "483": 0.5843244118481741, + "484": 0.501586420997483, + "485": 1.935551001902685, + "486": -0.0, + "487": 0.004612189442881668, + "488": 1.3346972073610854, + "489": 0.09336595392584522, + "490": 0.5821528653648875, + "491": 1.0027177153398008, + "492": -0.0, + "493": -0.0, + "494": 0.9530723248077004, + "495": -0.0, + "496": -0.0, + "497": 1.1665436166244172, + "498": 0.46314681946417985, + "499": -0.0, + "500": 1.6591116304890092, + "501": 0.7598132775655853, + "502": 0.004612189442881668, + "503": 1.1168553083656632, + "504": -0.0, + "505": -0.0, + "506": 1.5552334882663215, + "507": 1.2121178145058369, + "508": -0.0, + "509": 0.882421545720672, + "510": 0.07853135246870363, + "511": 0.012134802049152571, + "512": 1.5120264294053507, + "513": 1.4165128171811057, + "514": 0.004612189442881668, + "515": 1.4147521486188106, + "516": -0.0, + "517": 0.004612189442881668, + "518": 0.9730050471773519, + "519": -0.0, + "520": -0.0, + "521": -0.0, + "522": 0.008505956779570889, + "523": -0.0, + "524": 0.004610724485989303, + "525": -0.0, + "526": -0.0, + "527": 0.7406746864306757, + "528": -0.0, + "529": -0.0, + "530": 1.39454654626912, + "531": 0.009221264361831263, + "532": -0.0, + "533": 0.999656873932098, + "534": 0.5056372401888891, + "535": 0.004609260510614162, + "536": 1.1544792425056298, + "537": 0.004606335500396194, + "538": 0.02521958292277119, + "539": 0.3958556476176169, + "540": 0.004606335500396194, + "541": 0.00849794587877117, + "542": 0.9686921503846797, + "543": 0.004604874463547049, + "544": -0.0, + "545": 0.9150467845147432, + "546": 0.4975471295120371, + "547": 0.5035025599349838, + "548": 1.030100543075499, + "549": 1.0276842321960493, + "550": 0.004604874463547049, + "551": 0.6250713001100021, + "552": 0.004604874463547049, + "553": -0.0, + "554": 0.9997114417528099, + "555": -0.0, + "556": 0.01672021898522751, + "557": 1.4755311535987776, + "558": 0.5151524753979312, + "559": 0.5109118035272202, + "560": 1.3256029599260408, + "561": 1.274052308391087, + "562": 0.8768812982496061, + "563": 1.0874134053074123, + "564": -0.0, + "565": 0.009206644856873752, + "566": 1.5161424926073415, + "567": 1.3040976448136772, + "568": 0.721427518715716, + "569": 1.3183081855487997, + "570": 0.6248277736566282, + "571": 0.5008736256759829, + "572": 1.5641876949612665, + "573": 0.8148346432394387, + "574": -0.0, + "575": 1.8071846854506366, + "576": -0.0, + "577": -0.0, + "578": 1.271575816965962, + "579": -0.0, + "580": 0.008492614153553511, + "581": 1.145033781222553, + "582": -0.0, + "583": -0.0, + "584": 0.23887823458546256, + "585": 0.008492614153553511, + "586": 0.05342510393879929, + "587": 0.7689118539390899, + "588": -0.0, + "589": -0.0, + "590": 0.7174972752952106, + "591": 0.02015910903497759, + "592": -0.0, + "593": 1.641894987794224, + "594": 0.055744009456467486, + "595": 0.01309566058897263, + "596": 1.3704356843904453, + "597": 0.008492614153553511, + "598": 0.004603414404202646, + "599": 1.2738168875171996, + "600": 0.25459017530574, + "601": 0.004601955321363254, + "602": 1.5959296324068606, + "603": 0.02015283425026564, + "604": 0.021580385999016533, + "605": 0.2164659116500883, + "606": 1.0307812625796409, + "607": 0.03945719490835223, + "608": 1.6209887596546104, + "609": 0.004601955321363254, + "610": -0.0, + "611": 1.7898560365208693, + "612": 0.1373330010343276, + "613": 1.245498213379641, + "614": 1.0974975322507847, + "615": 0.7904300764264304, + "616": -0.0, + "617": 1.893894065849826, + "618": -0.0, + "619": -0.0, + "620": 1.0022304305023892, + "621": 0.867096940182509, + "622": 0.012104583926291896, + "623": 1.3841914591719198, + "624": 0.911592247845116, + "625": 0.03414536719704133, + "626": 1.3280814737495636, + "627": 0.01885878606374021, + "628": -0.0, + "629": 1.6406085030554571, + "630": 1.035056730639173, + "631": -0.0, + "632": 1.5387498694780084, + "633": 0.008484629842594472, + "634": 0.004599040081207897, + "635": 1.6798530123935693, + "636": 0.8524597978104723, + "637": -0.0, + "638": 1.1693437510236733, + "639": -0.0, + "640": 0.9574048133729158, + "641": 0.6037853371431344, + "642": -0.0, + "643": -0.0, + "644": -0.0, + "645": 0.7816292267264398, + "646": 0.00459758392189946, + "647": 1.3249448235570191, + "648": 0.9943173451279317, + "649": 0.8912921368124311, + "650": 1.6839866488254756, + "651": -0.0, + "652": -0.0, + "653": 1.5782321167891387, + "654": 0.015537184951879906, + "655": -0.0, + "656": 0.3614508842334042, + "657": 0.04994162817067191, + "658": 0.03120076405847207, + "659": 1.296390574488312, + "660": 0.008481971938907325, + "661": 0.00459758392189946, + "662": 1.271059519322621, + "663": 0.4908114899725606, + "664": -0.0, + "665": -0.0, + "666": -0.0, + "667": 0.18509870548477386, + "668": 1.3750799543353727, + "669": 0.03053318771639217, + "670": 0.013079188941020722, + "671": 0.8793209921762758, + "672": 0.5582527894011903, + "673": 0.012097054359144262, + "674": 1.0505727915266143, + "675": 0.5479271288867037, + "676": 0.015537184951879906, + "677": 0.9712542554376802, + "678": 0.6770580682366691, + "679": 0.6712518158197409, + "680": 1.0138506618606178, + "681": 0.016963209907316625, + "682": 0.008481971938907325, + "683": 1.13161331485896, + "684": 0.03901222062584464, + "685": 0.3368546540832583, + "686": 1.0034672642992148, + "687": 0.24047966873126375, + "688": 0.03580671220055549, + "689": 1.1333264205444125, + "690": 0.47741447623142397, + "691": -0.0, + "692": 1.437760470107862, + "693": 0.015537184951879906, + "694": 0.9975977902729697, + "695": 0.5626499684608199, + "696": 0.5155942150743459, + "697": 0.9959559740646505, + "698": 1.5795038997777444, + "699": 1.0006800442221877, + "700": 0.00459467451985003, + "701": 1.7443514189506293, + "702": 1.6393318665171819, + "703": 1.0369385065406176, + "704": 1.012649134876126, + "705": 0.02057150873791209, + "706": 0.03411437080500477, + "707": 0.9788230821455083, + "708": 0.004596128735111088, + "709": -0.0, + "710": 0.9239658345729693, + "711": 1.5046729014195803, + "712": 0.687075951541956, + "713": 1.3663957551492758, + "714": -0.0, + "715": -0.0, + "716": 0.7570600948592898, + "717": -0.0, + "718": -0.0, + "719": 1.2939534322816206, + "720": 0.00459467451985003, + "721": 0.004596128735111088, + "722": 0.44751483545452886, + "723": 0.0425900141249192, + "724": 0.0876611150513419, + "725": 1.9010087687564614, + "726": -0.0, + "727": 0.009192074173788197, + "728": 0.9139214678098945, + "729": -0.0, + "730": -0.0, + "731": 0.8064415211895289, + "732": 0.5100434335660928, + "733": 0.5015867099083439, + "734": 0.6917978563544347, + "735": 0.004596128735111088, + "736": 0.004596128735111088, + "737": 0.30090387906829036, + "738": 0.004596128735111088, + "739": 0.013075077875750796, + "740": 0.9764377682552349, + "741": -0.0, + "742": -0.0, + "743": 0.9324343607426666, + "744": 0.012093293306198597, + "745": -0.0, + "746": 0.8637255365674199, + "747": 0.6324892903717487, + "748": 0.528783181837761, + "749": 0.27217001489725745, + "750": 0.008479315798877294, + "751": -0.0, + "752": 0.9171033199238531, + "753": -0.0, + "754": -0.0, + "755": 0.9233176913563181, + "756": 0.004596128735111088, + "757": -0.0, + "758": 0.9998397329438761, + "759": 0.004596128735111088, + "760": -0.0, + "761": -0.0, + "762": 0.004596128735111088, + "763": 0.016957898150493513, + "764": 1.8089604446717313, + "765": 1.0038766935186543, + "766": 0.004596128735111088, + "767": 1.4812448268038219, + "768": 0.015532381400671702, + "769": -0.0, + "770": 1.2846656012866293, + "771": 0.3240971584764411, + "772": -0.0, + "773": 1.552770404254323, + "774": -0.0, + "775": 0.004596128735111088, + "776": 1.0163509601178147, + "777": 0.009192074173788197, + "778": -0.0, + "779": 0.4916265504440225, + "780": 0.48284929986587, + "781": 0.004596128735111088, + "782": 1.5087317551674415, + "783": 0.016688871955852218, + "784": -0.0, + "785": -0.0, + "786": 0.2919720995197035, + "787": -0.0, + "788": 1.7923660501950653, + "789": 0.24973544979839393, + "790": 0.5506402623889808, + "791": -0.0, + "792": -0.0, + "793": -0.0, + "794": 0.8546426178777419, + "795": 0.03411437080500477, + "796": -0.0, + "797": 0.6545079550502189, + "798": 0.004580185583795037, + "799": 0.1789089784247896, + "800": 0.9056273904191197, + "801": 0.37266381838303303, + "802": 0.5607393644054305, + "803": 0.6559132945628645, + "804": 0.7888969904575018, + "805": -0.0, + "806": 1.8477709801628208, + "807": 0.699841032123091, + "808": 0.6841230015165072, + "809": 1.504003555775767, + "810": 0.028108165133522146, + "811": -0.0, + "812": 0.6810995844562278, + "813": 0.021204564915593235, + "814": -0.0, + "815": 0.9593087637586781, + "816": 0.013025957482890278, + "817": 0.004575857681184585, + "818": 1.8140300392563637, + "819": -0.0, + "820": 0.004565792718436464, + "821": 1.1241052649596441, + "822": 0.021899082223187268, + "823": 0.004564358678305205, + "824": 0.24040900741125545, + "825": -0.0, + "826": 0.1578843876277283, + "827": 0.37644470236202143, + "828": 0.322091741273233, + "829": 0.6554673306835683, + "830": 0.892726335139851, + "831": -0.0, + "832": 0.004564358678305205, + "833": 1.790623341529942, + "834": 0.015427497412718174, + "835": 0.02384737607195917, + "836": 0.5924912647501019, + "837": -0.0, + "838": -0.0, + "839": 0.9775140431111167, + "840": 0.52047919323839, + "841": 0.5083582495600605, + "842": 1.6201502715006464, + "843": -0.0, + "844": -0.0, + "845": -0.0, + "846": -0.0, + "847": 0.004564358678305205, + "848": 0.95514723036926, + "849": -0.0, + "850": 0.08258222362263666, + "851": 0.9356518235084692, + "852": 0.004564358678305205, + "853": 0.012011174102656907, + "854": 0.5125001816082045, + "855": -0.0, + "856": -0.0, + "857": 0.47484804438263234, + "858": 0.5208383115925458, + "859": 0.004564358678305205, + "860": 1.6792345718616302, + "861": 0.004562925588200431, + "862": -0.0, + "863": 1.417096689072676, + "864": 0.009128536901438172, + "865": 0.008421323322937465, + "866": 1.2886938612812417, + "867": 0.5345100333347647, + "868": 0.14928310438654394, + "869": 0.6001114271509433, + "870": 0.004564358678305205, + "871": -0.0, + "872": 0.24209760238332156, + "873": 0.03954837507415033, + "874": 0.012011174102656907, + "875": 1.4293904583643133, + "876": 0.9664394168151684, + "877": 0.554872428108538, + "878": 1.1677204748223242, + "879": -0.0, + "880": -0.0, + "881": 0.620170306696934, + "882": 1.403329544541858, + "883": 0.004564358678305205, + "884": 1.8025377722054103, + "885": 0.004564358678305205, + "886": 0.004564358678305205, + "887": 0.658310199101183, + "888": 0.004564358678305205, + "889": 0.009128536901438172, + "890": 0.19644475719588478, + "891": 0.03674194629554105, + "892": 0.41021640265700976, + "893": 1.338052135088008, + "894": 0.008421323322937465, + "895": -0.0, + "896": 1.8326002841602125, + "897": 0.05037721387871663, + "898": -0.0, + "899": 0.9641299857882892, + "900": 0.85232413931058, + "901": 0.6952762755981486, + "902": 1.0240352608371148, + "903": 1.2201079838812905, + "904": -0.0, + "905": 0.68404680435211, + "906": 0.7507565702345096, + "907": 0.004564358678305205, + "908": 1.4175728007411286, + "909": 0.004564358678305205, + "910": -0.0, + "911": 0.988278862740377, + "912": 1.493142757273085, + "913": 0.1427149742314909, + "914": 1.7190430091140474, + "915": 0.9954096224364049, + "916": -0.0, + "917": 1.3490066907406137, + "918": 0.5244118671330419, + "919": 0.4976934680392413, + "920": 1.490073712880028, + "921": 0.9177880584674318, + "922": 0.13632730518333763, + "923": 1.0387851975592466, + "924": 0.8474393561725626, + "925": -0.0, + "926": 1.3953439130340493, + "927": 0.030984563331676103, + "928": -0.0, + "929": 0.49339686887215284, + "930": 0.494473817464377, + "931": 0.004564358678305205, + "932": 1.2141951197987633, + "933": 0.015427497412718174, + "934": 0.48580542774456315, + "935": 0.9824413872509931, + "936": -0.0, + "937": -0.0, + "938": 1.0332698536101301, + "939": 0.016574991223834344, + "940": 0.004564358678305205, + "941": 1.4571530557378731, + "942": 0.009128536901438172, + "943": 0.008421323322937465, + "944": 0.9619339728835334, + "945": 0.019991133887021534, + "946": -0.0, + "947": 0.6681650541191646, + "948": 1.1256466493042245, + "949": -0.0, + "950": 1.429701458104946, + "951": 0.6163581139631706, + "952": 0.004562925588200431, + "953": 0.9416295239486306, + "954": 0.02645426688447952, + "955": -0.0, + "956": 1.5130326810518024, + "957": -0.0, + "958": 0.09389485538373744, + "959": 0.9698666862070494, + "960": 1.7317535092829257, + "961": 0.004564358678305205, + "962": 1.868468276988858, + "963": 0.008421323322937465, + "964": 0.9832579558837544, + "965": 0.9188830154211242, + "966": -0.0, + "967": -0.0, + "968": 1.5776206029404753, + "969": 0.9387463708566126, + "970": 0.004562925588200431, + "971": 1.9988672358043018, + "972": 0.009125670848803863, + "973": -0.0, + "974": 0.3618224487533669, + "975": 0.694042651052509, + "976": 0.00456149344716018, + "977": 1.5651847112057518, + "978": 1.3692664186024899, + "979": 0.00456149344716018, + "980": 1.856500548376683, + "981": 0.47899631749249844, + "982": 0.00456149344716018, + "983": 0.7956736625665646, + "984": 0.6677003622071602, + "985": 0.008416092913244634, + "986": 1.589420123088107, + "987": 0.85671897575755, + "988": -0.0, + "989": 1.2409504799227344, + "990": 0.12182480878508377, + "991": 0.01200006770894612, + "992": 1.811019009531325, + "993": 1.0034287205744323, + "994": 0.1446470537112937, + "995": 1.450674883601429, + "996": 0.00456149344716018, + "997": 0.00456149344716018, + "998": 0.5718918240748895, + "999": -0.0, + "1000": -0.0, + "1001": 0.9094564442618093, + "1002": -0.0, + "1003": -0.0, + "1004": -0.0, + "1005": 0.05296717423249332, + "1006": -0.0, + "1007": 1.6338010591736842, + "1008": -0.0, + "1009": -0.0, + "1010": 0.9943221664808162, + "1011": 0.2120884333521449, + "1012": 0.019978809473130715, + "1013": 1.3809468266544973, + "1014": 0.0367199523867255, + "1015": -0.0, + "1016": 1.388209787988833, + "1017": 0.27258894220023944, + "1018": 0.032566383089599096, + "1019": 0.3768327574061038, + "1020": -0.0, + "1021": 0.008416092913244634, + "1022": 0.6399314274231406, + "1023": -0.0, + "1024": -0.0, + "1025": 0.9450620986622489, + "1026": 0.6146643635577635, + "1027": -0.0, + "1028": 1.425500553132696, + "1029": 1.4967506280477052, + "1030": 0.06314175190905169, + "1031": 1.3846306404811803, + "1032": 0.026446181827792292, + "1033": 0.01297722589637098, + "1034": 1.057062718337363, + "1035": 0.8479297383723363, + "1036": -0.0, + "1037": 1.5782093881816504, + "1038": 1.3727920416749155, + "1039": 0.0450228959941397, + "1040": 1.1735366423698042, + "1041": 0.019978809473130715, + "1042": 0.04988343556837674, + "1043": 1.401178127216012, + "1044": -0.0, + "1045": 0.00456149344716018, + "1046": 0.8586872909366411, + "1047": 0.03386855598926829, + "1048": -0.0, + "1049": 0.7159395532825403, + "1050": 0.01541331173734973, + "1051": 0.016831464770936354, + "1052": 0.8711281829645947, + "1053": -0.0, + "1054": -0.0, + "1055": -0.0, + "1056": 0.42251747462608924, + "1057": 0.48448385782680925, + "1058": 1.106064682848174, + "1059": 0.417282788705125, + "1060": 0.032566383089599096, + "1061": 1.3586109336506627, + "1062": 0.024982680255327173, + "1063": 0.15202410968304675, + "1064": 0.38909615556497906, + "1065": 0.015418037209098897, + "1066": -0.0, + "1067": -0.0, + "1068": 0.008416092913244634, + "1069": 0.00456149344716018, + "1070": 0.6158177074945221, + "1071": 0.008416092913244634, + "1072": -0.0, + "1073": 0.626143975755823, + "1074": -0.0, + "1075": 0.008416092913244634, + "1076": 0.11245319924728535, + "1077": -0.0, + "1078": 0.009122806694163363, + "1079": 0.25135045577030435, + "1080": 0.14420920255254652, + "1081": 0.008416092913244634, + "1082": 0.7084109168831811, + "1083": 0.008416092913244634, + "1084": -0.0, + "1085": 0.41055433570486227, + "1086": 0.5195307618977809, + "1087": 0.5944552567684035, + "1088": 1.3517904267510952, + "1089": 0.5759775891537287, + "1090": 0.008416092913244634, + "1091": 0.6890860203295368, + "1092": 0.14755247294151466, + "1093": 0.008416092913244634, + "1094": 1.4019083408904394, + "1095": 0.06903624789221652, + "1096": -0.0, + "1097": 1.1248877026492676, + "1098": 0.5526704869655834, + "1099": -0.0, + "1100": 0.29934979625995733, + "1101": 0.5952176097745835, + "1102": -0.0, + "1103": 1.0387625776367813, + "1104": 0.5877524777962148, + "1105": -0.0, + "1106": 1.6879636849209159, + "1107": 0.015418037209098897, + "1108": 0.0870536344490743, + "1109": 1.1292898570092809, + "1110": 0.028006333030382594, + "1111": 0.00456149344716018, + "1112": 1.170728028480199, + "1113": 0.009122806694163363, + "1114": 0.8702227861407972, + "1115": 0.9211129219730128, + "1116": 0.08474964832038377, + "1117": 0.04228103851449924, + "1118": 0.9185312251995237, + "1119": 1.3575966863041364, + "1120": -0.0, + "1121": 1.003647131861562, + "1122": -0.0, + "1123": -0.0, + "1124": 0.6866800228912573, + "1125": -0.0, + "1126": -0.0, + "1127": 1.4492414948507082, + "1128": 0.05679593903406538, + "1129": -0.0, + "1130": 1.5145313822038557, + "1131": 0.021879121174970085, + "1132": 0.004560062254223774, + "1133": 0.9359932231716138, + "1134": 0.00841348028865096, + "1135": -0.0, + "1136": 0.305761849115986, + "1137": 0.5163342818499991, + "1138": -0.0, + "1139": 1.507764548869463, + "1140": -0.0, + "1141": 0.6757461154132695, + "1142": 1.632530578256445, + "1143": 0.13596435182022557, + "1144": 0.10271325407997653, + "1145": 1.2119025702760704, + "1146": 0.004558632008431808, + "1147": -0.0, + "1148": 1.0003079796318561, + "1149": 0.198126931689221, + "1150": -0.0, + "1151": 1.276933858024586, + "1152": 0.004560062254223774, + "1153": -0.0, + "1154": 1.6892718818361694, + "1155": -0.0, + "1156": -0.0, + "1157": 1.5772595356006915, + "1158": 0.6048232940318393, + "1159": -0.0, + "1160": 1.2012569664418444, + "1161": 0.15158632472195982, + "1162": 0.004560062254223774, + "1163": 1.5582541671466108, + "1164": 0.13874996765255565, + "1165": -0.0, + "1166": 0.1546897906450109, + "1167": -0.0, + "1168": -0.0, + "1169": 1.4465508702165222, + "1170": -0.0, + "1171": 0.004560062254223774, + "1172": 1.4869156499893612, + "1173": 0.1771726918277677, + "1174": -0.0, + "1175": 1.0386463541542938, + "1176": -0.0, + "1177": -0.0, + "1178": 0.8068476641059845, + "1179": 0.772247455142477, + "1180": -0.0, + "1181": 0.042274263458417505, + "1182": 0.009119944435595502, + "1183": -0.0, + "1184": 0.7610245000116359, + "1185": 0.9110635476666021, + "1186": 0.004560062254223774, + "1187": 1.4556750412899087, + "1188": -0.0, + "1189": -0.0, + "1190": 0.8530354052774198, + "1191": -0.0, + "1192": -0.0, + "1193": 0.7350124219251222, + "1194": 0.004560062254223774, + "1195": -0.0, + "1196": 0.4228745362653107, + "1197": 0.49412480360076194, + "1198": 0.5382786850584192, + "1199": 0.8190427045403407, + "1200": -0.0, + "1201": -0.0, + "1202": 0.4552986785124067, + "1203": -0.0, + "1204": 0.12806555660656896, + "1205": 0.996197245113933, + "1206": 0.08000172566089733, + "1207": -0.0, + "1208": 1.320258995542099, + "1209": -0.0, + "1210": 0.00841348028865096, + "1211": 1.650627704488652, + "1212": 0.5544955786734989, + "1213": 0.5631933310509907, + "1214": 1.416429531183243, + "1215": 0.15893962457537897, + "1216": -0.0, + "1217": 0.042274263458417505, + "1218": 0.9934698419928648, + "1219": -0.0, + "1220": 1.256255062375021, + "1221": 0.1519679109560659, + "1222": 0.13621229862218556, + "1223": 1.3773412560785792, + "1224": 0.004560062254223774, + "1225": -0.0, + "1226": 1.6126703130947195, + "1227": -0.0, + "1228": -0.0, + "1229": 1.214606901268218, + "1230": -0.0, + "1231": -0.0, + "1232": 1.1572560375716519, + "1233": 0.3927969585441861, + "1234": 0.00841348028865096, + "1235": 1.3450873274121085, + "1236": 0.14072283306754452, + "1237": -0.0, + "1238": 1.7685005270183696, + "1239": 0.999466296790616, + "1240": -0.0, + "1241": 1.8499747290545425, + "1242": 0.4744583284135795, + "1243": 0.027997882662905885, + "1244": 1.0175395380453054, + "1245": 0.020412466987387384, + "1246": -0.0, + "1247": 1.2789989791520588, + "1248": -0.0, + "1249": -0.0, + "1250": 0.9922593394507365, + "1251": 0.00841348028865096, + "1252": 0.14613512443322668, + "1253": 0.47223439417787666, + "1254": -0.0, + "1255": 0.00841348028865096, + "1256": 1.125217752345197, + "1257": 0.4257972377474375, + "1258": -0.0, + "1259": 1.186961089886742, + "1260": -0.0, + "1261": -0.0, + "1262": 1.1807069338205696, + "1263": 0.9010423636205427, + "1264": 0.557882373439406, + "1265": 1.5508143292117003, + "1266": 0.004560062254223774, + "1267": -0.0, + "1268": 0.8090317922202895, + "1269": -0.0, + "1270": 0.4962720334581189, + "1271": 1.7802682384028998, + "1272": 1.080518850124144, + "1273": -0.0, + "1274": 1.3758165210785729, + "1275": 0.004560062254223774, + "1276": -0.0, + "1277": 1.271233631589513, + "1278": 0.1480926131302198, + "1279": 0.004560062254223774, + "1280": 1.3306911806868507, + "1281": 0.8712869820505358, + "1282": -0.0, + "1283": 1.5092442991744794, + "1284": -0.0, + "1285": 0.015394440645404319, + "1286": 0.9336213035514911, + "1287": 0.567018022115792, + "1288": -0.0, + "1289": 0.8998779207187453, + "1290": 0.14915602198681335, + "1291": 0.052951534453659875, + "1292": 0.6319704033528378, + "1293": 0.06904033781468372, + "1294": 0.02497511741962324, + "1295": 0.012973182333518168, + "1296": -0.0, + "1297": -0.0, + "1298": 0.6558672245935748, + "1299": 0.01655958955361131, + "1300": -0.0, + "1301": -0.0, + "1302": 0.00841348028865096, + "1303": 0.004560062254223774, + "1304": 0.47111945700263613, + "1305": 0.004560062254223774, + "1306": -0.0, + "1307": 0.15004142409098845, + "1308": -0.0, + "1309": -0.0, + "1310": 1.3841242203041275, + "1311": 0.02040615956008207, + "1312": 0.14276550052875608, + "1313": 0.21044766375288904, + "1314": 0.00841348028865096, + "1315": 0.016826240031238813, + "1316": 0.7755412667338797, + "1317": 0.12819165741880154, + "1318": 0.052951534453659875, + "1319": 1.1269612830312152, + "1320": 0.004560062254223774, + "1321": -0.0, + "1322": 0.9309222696818436, + "1323": 0.6671483796593907, + "1324": 0.7852438016854778, + "1325": 1.441899241466039, + "1326": 0.49947896719908513, + "1327": 0.6062520430053785, + "1328": 0.7943796353166428, + "1329": -0.0, + "1330": 0.00841348028865096, + "1331": 0.9935741144566945, + "1332": 0.9706882379143097, + "1333": -0.0, + "1334": 1.048550881117057, + "1335": 0.05296289277645273, + "1336": 0.5691961808896446, + "1337": 1.5789454091928414, + "1338": 0.042268268580811535, + "1339": 0.4982949135071556, + "1340": 0.9646771807020853, + "1341": 0.6052684608487996, + "1342": -0.0, + "1343": 0.64254604161527, + "1344": 0.01541331173734973, + "1345": -0.0, + "1346": 1.007221999405815, + "1347": 1.0275004480523924, + "1348": -0.0, + "1349": 1.147817499180765, + "1350": -0.0, + "1351": -0.0, + "1352": 1.4273014650557045, + "1353": -0.0, + "1354": -0.0, + "1355": 0.28255827940220024, + "1356": 0.004560062254223774, + "1357": 0.004560062254223774, + "1358": 0.4788826065592328, + "1359": -0.0, + "1360": -0.0, + "1361": 1.5581625569348572, + "1362": 0.01541331173734973, + "1363": 0.004560062254223774, + "1364": 1.6994675222362037, + "1365": 0.3896953407984314, + "1366": 0.009119944435595502, + "1367": 1.1774104105492014, + "1368": -0.0, + "1369": -0.0, + "1370": 0.9882385113328636, + "1371": 0.9358105925625273, + "1372": 0.02953391782560344, + "1373": 1.566199469642858, + "1374": 0.004560062254223774, + "1375": -0.0, + "1376": 0.68040148899421, + "1377": -0.0, + "1378": -0.0, + "1379": 1.0616731316705712, + "1380": 0.027109290496262737, + "1381": 0.004560062254223774, + "1382": 1.0693864249851812, + "1383": 0.08702849637395134, + "1384": 0.49519934946046323, + "1385": 0.7836751162938864, + "1386": -0.0, + "1387": 0.019972653318070348, + "1388": 0.8366751077660954, + "1389": -0.0, + "1390": -0.0, + "1391": 0.6865404692137148, + "1392": 0.004560062254223774, + "1393": -0.0, + "1394": 0.9774712453105903, + "1395": 0.5896369327785599, + "1396": -0.0, + "1397": 0.5521499263592862, + "1398": -0.0, + "1399": -0.0, + "1400": 1.4106704546694622, + "1401": 0.6096748331024783, + "1402": 0.09187469973035883, + "1403": 0.7191796138565711, + "1404": 0.888799802267673, + "1405": -0.0, + "1406": 1.5662819391236096, + "1407": 0.745173218935699, + "1408": -0.0, + "1409": 1.1410103025146654, + "1410": -0.0, + "1411": 0.004560062254223774, + "1412": 0.8105780447489515, + "1413": -0.0, + "1414": -0.0, + "1415": 0.7175263340171835, + "1416": -0.0, + "1417": 0.033858396127304624, + "1418": 0.5005442564954414, + "1419": 0.24513538270571367, + "1420": 0.030956599683754818, + "1421": 0.46438786141253263, + "1422": 0.01541331173734973, + "1423": 0.05150653351950674, + "1424": 0.6468688571183103, + "1425": 0.9796475659741625, + "1426": -0.0, + "1427": 1.604368419436289, + "1428": 0.6110909231334031, + "1429": 0.04777634446260451, + "1430": 1.005565985673671, + "1431": 0.583924197002619, + "1432": 0.018697612528795603, + "1433": 1.232110561141503, + "1434": -0.0, + "1435": 0.534698282291093, + "1436": 0.6629763525206961, + "1437": 0.1407625447238044, + "1438": -0.0, + "1439": 0.15804720585637508, + "1440": -0.0, + "1441": 0.9525935868678814, + "1442": 0.8768428371032608, + "1443": 0.16221026960768067, + "1444": 0.10430656966874567, + "1445": 1.5652030760809938, + "1446": 0.2253939921596214, + "1447": -0.0, + "1448": 1.389547611974847, + "1449": -0.0, + "1450": -0.0, + "1451": 0.49615546156958523, + "1452": 1.3132649311085967, + "1453": 0.011996370424748048, + "1454": 1.8614575031556435, + "1455": -0.0, + "1456": -0.0, + "1457": 0.8303969396944286, + "1458": 0.004558632008431808, + "1459": -0.0, + "1460": 0.8972394496845044, + "1461": -0.0, + "1462": 0.023818018146658217, + "1463": 0.43188013843392253, + "1464": -0.0, + "1465": 0.00841086938191613, + "1466": 0.6274058874639565, + "1467": -0.0, + "1468": -0.0, + "1469": 1.314057785537531, + "1470": 0.15579377956800672, + "1471": -0.0, + "1472": 1.0091220407492971, + "1473": 0.00841086938191613, + "1474": 0.744081999790164, + "1475": 0.9265579379954834, + "1476": 0.7722051549338407, + "1477": -0.0, + "1478": 1.5683331587382838, + "1479": -0.0, + "1480": -0.0, + "1481": 1.0700699295471534, + "1482": 0.02710097896331548, + "1483": -0.0, + "1484": 1.1684672281520896, + "1485": 0.012969141435398991, + "1486": 0.015408589348188083, + "1487": 0.9905267992307305, + "1488": 0.004558632008431808, + "1489": -0.0, + "1490": 1.1996174116251983, + "1491": 0.5072938368164169, + "1492": 0.004558632008431808, + "1493": 1.7964099280024994, + "1494": 0.009117084071181667, + "1495": 0.004558632008431808, + "1496": 1.422342529019706, + "1497": 0.004558632008431808, + "1498": 0.004558632008431808, + "1499": 1.5280505979004133, + "1500": -0.0, + "1501": -0.0, + "1502": 0.7709528994553893, + "1503": 0.004558632008431808, + "1504": -0.0, + "1505": 1.5264648532626341, + "1506": 0.08459669160994185, + "1507": 0.004558632008431808, + "1508": 1.3205576103487144, + "1509": -0.0, + "1510": -0.0, + "1511": 1.2958798535315312, + "1512": -0.0, + "1513": -0.0, + "1514": 1.1042151772338316, + "1515": 0.1155542262686727, + "1516": 0.004558632008431808, + "1517": 1.0234758669864714, + "1518": -0.0, + "1519": -0.0, + "1520": 0.6412060560999133, + "1521": 0.6524762729045575, + "1522": -0.0, + "1523": 1.238193446442405, + "1524": 0.8927235761734676, + "1525": -0.0, + "1526": 1.8773471475582826, + "1527": 0.4982949135071556, + "1528": 0.004558632008431808, + "1529": 0.4146977095161366, + "1530": 0.23037921866537728, + "1531": -0.0, + "1532": 1.7935436453344185, + "1533": 0.8084678039188287, + "1534": -0.0, + "1535": 0.8413701807239055, + "1536": 0.016554462405333748, + "1537": 0.004558632008431808, + "1538": 1.3911656740318652, + "1539": 0.024967559478864067, + "1540": -0.0, + "1541": 1.7065461446474122, + "1542": -0.0, + "1543": -0.0, + "1544": 1.532676295367102, + "1545": -0.0, + "1546": 0.009117084071181667, + "1547": 1.5242411360589776, + "1548": 0.9836157362408758, + "1549": -0.0, + "1550": 1.8498092169435596, + "1551": -0.0, + "1552": -0.0, + "1553": 1.488642948719149, + "1554": 0.742905894476476, + "1555": 0.009117084071181667, + "1556": 1.49301205318221, + "1557": 0.5983371872997312, + "1558": 0.00841086938191613, + "1559": 1.4407863188426822, + "1560": 0.004558632008431808, + "1561": 0.004558632008431808, + "1562": 0.9485227302112391, + "1563": 0.9998258670843068, + "1564": 0.7101938711573677, + "1565": 0.9765205199805508, + "1566": -0.0, + "1567": 0.017527233415984694, + "1568": 1.6839339958101567, + "1569": 0.00841086938191613, + "1570": 0.019966501192201943, + "1571": 0.9024024838128464, + "1572": 0.004558632008431808, + "1573": 0.004558632008431808, + "1574": 0.9988714849476876, + "1575": 0.016554462405333748, + "1576": 0.00841086938191613, + "1577": 0.6100170067532777, + "1578": 0.7730205103165124, + "1579": -0.0, + "1580": 1.970159250659894, + "1581": 0.00841086938191613, + "1582": 0.5188355848942698, + "1583": 1.5350192534673532, + "1584": 0.15809312810269643, + "1585": 0.15752081163441098, + "1586": 0.4914395283011252, + "1587": 0.036397423928520155, + "1588": 0.023818018146658217, + "1589": 1.0031838548841727, + "1590": 0.9974766580926463, + "1591": 1.2846963260333433, + "1592": 1.5484605677817103, + "1593": 0.345512690458312, + "1594": 0.015408589348188083, + "1595": 0.6437287546333038, + "1596": 0.0165493386223052, + "1597": -0.0, + "1598": 1.483884723571051, + "1599": -0.0, + "1600": 0.00841086938191613, + "1601": 1.9406004981951899, + "1602": -0.0, + "1603": -0.0, + "1604": 1.3716202868937013, + "1605": 1.1645820619539036, + "1606": -0.0, + "1607": 1.6995275332916129, + "1608": -0.0, + "1609": -0.0, + "1610": 0.004558632008431808, + "1611": 0.05765543743063059, + "1612": -0.0, + "1613": 0.8213838644073568, + "1614": -0.0, + "1615": 0.004558632008431808, + "1616": 1.5221297192441103, + "1617": 0.004558632008431808, + "1618": 0.004558632008431808, + "1619": 1.531001064648684, + "1620": 0.1401697950009077, + "1621": 0.9110712123969265, + "1622": 0.7485630062049125, + "1623": -0.0, + "1624": -0.0, + "1625": 0.829388836176798, + "1626": 0.004558632008431808, + "1627": -0.0, + "1628": 1.7893703028880257, + "1629": 0.02187247612535633, + "1630": -0.0, + "1631": 0.5470219904440798, + "1632": 0.004558632008431808, + "1633": -0.0, + "1634": 1.5895512198606125, + "1635": -0.0, + "1636": 0.004558632008431808, + "1637": 0.9773215535887814, + "1638": 0.004558632008431808, + "1639": -0.0, + "1640": 1.1075729784839219, + "1641": 0.08001992750611532, + "1642": 0.004558632008431808, + "1643": 0.9496252794986997, + "1644": 0.8549578003873212, + "1645": -0.0, + "1646": 1.5946083569665728, + "1647": -0.0, + "1648": -0.0, + "1649": 1.462665213325527, + "1650": 0.1421536833620245, + "1651": 0.004558632008431808, + "1652": 0.9644182964837897, + "1653": 0.4993618688976174, + "1654": 0.004558632008431808, + "1655": 1.5680162162230404, + "1656": 1.4884514482187534, + "1657": -0.0, + "1658": 0.5416182314123731, + "1659": -0.0, + "1660": 0.009117084071181667, + "1661": 1.7058005728999237, + "1662": 0.015408589348188083, + "1663": 0.7478147016375496, + "1664": 0.8170373143452756, + "1665": 0.035242769664535836, + "1666": 0.9934792436558154, + "1667": 1.4808100990093365, + "1668": 0.9069583741174152, + "1669": -0.0, + "1670": 1.4400774382284216, + "1671": -0.0, + "1672": 0.00841086938191613, + "1673": 1.4335354231547763, + "1674": 1.3850089467931, + "1675": 0.5481240486333745, + "1676": 0.8388386152097236, + "1677": 1.0075880055439175, + "1678": 0.011996370424748048, + "1679": 1.4777261873908671, + "1680": 0.5268765127811951, + "1681": -0.0, + "1682": 1.2417825398357478, + "1683": 0.513435150093204, + "1684": 0.4993481393706889, + "1685": 0.7461201982993955, + "1686": -0.0, + "1687": -0.0, + "1688": 1.7872862362070796, + "1689": -0.0, + "1690": -0.0, + "1691": 0.8334279481012631, + "1692": 0.00841086938191613, + "1693": -0.0, + "1694": 0.9168769243311488, + "1695": 0.9993951517197741, + "1696": -0.0, + "1697": 1.6660078685058504, + "1698": 0.4026267843295295, + "1699": -0.0, + "1700": 1.8870130201329802, + "1701": -0.0, + "1702": 0.004558632008431808, + "1703": 1.8977156194438232, + "1704": 0.03384824280250546, + "1705": -0.0, + "1706": 1.1950419496266984, + "1707": 0.7726880714816059, + "1708": -0.0, + "1709": 1.2398630986721906, + "1710": -0.0, + "1711": -0.0, + "1712": 1.1299128892206989, + "1713": 0.834468207945833, + "1714": 0.004558632008431808, + "1715": 1.332634854812881, + "1716": -0.0, + "1717": 0.004558632008431808, + "1718": 0.9572501404520202, + "1719": 0.004558632008431808, + "1720": 0.00841086938191613, + "1721": 1.5396476977266045, + "1722": 0.004558632008431808, + "1723": 0.004558632008431808, + "1724": 1.3161069496743962, + "1725": 0.00841086938191613, + "1726": -0.0, + "1727": 0.8511039548194652, + "1728": 0.004558632008431808, + "1729": -0.0, + "1730": 0.993192292941743, + "1731": -0.0, + "1732": 0.004558632008431808, + "1733": -0.0, + "1734": 0.004558632008431808, + "1735": -0.0, + "1736": 0.940157557883573, + "1737": 0.015408589348188083, + "1738": -0.0, + "1739": 1.5951270056794216, + "1740": -0.0, + "1741": -0.0, + "1742": 0.3344391965557444, + "1743": -0.0, + "1744": 0.5059892207728304, + "1745": 0.9360849564761602, + "1746": 0.004558632008431808, + "1747": -0.0, + "1748": 1.9277619323298323, + "1749": -0.0, + "1750": -0.0, + "1751": 0.9165322851203591, + "1752": 0.04226168037189109, + "1753": -0.0, + "1754": 1.0050903886045919, + "1755": 0.1577087353546804, + "1756": 0.004558632008431808, + "1757": 1.393403150706642, + "1758": 0.009117084071181667, + "1759": 0.009117084071181667, + "1760": 1.3825223036122518, + "1761": 0.5435644431995964, + "1762": 0.009117084071181667, + "1763": 1.4833110764198758, + "1764": 0.00841086938191613, + "1765": -0.0, + "1766": 0.004558632008431808, + "1767": 0.009117084071181667, + "1768": 0.004558632008431808, + "1769": 0.7943269274699615, + "1770": 0.004558632008431808, + "1771": -0.0, + "1772": 0.8173641260665445, + "1773": -0.0, + "1774": -0.0, + "1775": 0.5213505924273468, + "1776": -0.0, + "1777": 0.004558632008431808, + "1778": 1.6823469461169984, + "1779": 0.004558632008431808, + "1780": -0.0, + "1781": -0.0, + "1782": 0.5033768748492929, + "1783": -0.0, + "1784": 1.3413923010048496, + "1785": 0.012969141435398991, + "1786": 0.3320841352886695, + "1787": 0.71091815377449, + "1788": 0.047893328773201696, + "1789": 0.00841086938191613, + "1790": 1.0190578465812699, + "1791": 0.6046913075545243, + "1792": -0.0, + "1793": 1.4578622698714834, + "1794": 0.6202354605297864, + "1795": 0.15598229509909556, + "1796": 1.7284103517943266, + "1797": 0.009117084071181667, + "1798": 0.02452423283592375, + "1799": 0.9789983694516357, + "1800": 0.017527233415984694, + "1801": 0.00841086938191613, + "1802": 1.3609096141109926, + "1803": 0.3190903232052296, + "1804": -0.0, + "1805": 1.7592352231880075, + "1806": 0.8162766280710438, + "1807": 0.5290016688278258, + "1808": 1.418633026220488, + "1809": 1.4628373035660598, + "1810": 0.004558632008431808, + "1811": 1.502494627244637, + "1812": -0.0, + "1813": 0.009117084071181667, + "1814": 0.9039846845772105, + "1815": 0.013675356124664528, + "1816": 0.004558632008431808, + "1817": 0.8757840994585253, + "1818": 0.9224749626859488, + "1819": -0.0, + "1820": 1.6328154459613642, + "1821": -0.0, + "1822": 0.013675356124664528, + "1823": 0.7323621832430399, + "1824": 0.011996370424748048, + "1825": -0.0, + "1826": 0.7740758451075287, + "1827": 0.004558632008431808, + "1828": 0.004558632008431808, + "1829": 1.788717634245037, + "1830": -0.0, + "1831": 0.00841086938191613, + "1832": 0.9558516703051327, + "1833": 0.011996370424748048, + "1834": -0.0, + "1835": 1.0873950309897757, + "1836": 0.6728982775993064, + "1837": -0.0, + "1838": 1.6309798971943255, + "1839": -0.0, + "1840": -0.0, + "1841": 1.8278587785551448, + "1842": 0.8688371058285456, + "1843": -0.0, + "1844": 0.8458464051446077, + "1845": 0.004558632008431808, + "1846": 0.009117084071181667, + "1847": 0.8630538763551521, + "1848": 0.004558632008431808, + "1849": -0.0, + "1850": 0.11133606685705028, + "1851": -0.0, + "1852": -0.0, + "1853": 0.6969586605704164, + "1854": -0.0, + "1855": 0.004558632008431808, + "1856": 0.9767721276252163, + "1857": -0.0, + "1858": 0.004558632008431808, + "1859": 0.47332337846847466, + "1860": -0.0, + "1861": 0.004558632008431808, + "1862": 0.9782975326952877, + "1863": 0.004558632008431808, + "1864": 0.004558632008431808, + "1865": 0.9991541764937049, + "1866": -0.0, + "1867": -0.0, + "1868": 0.9467160061261788, + "1869": -0.0, + "1870": -0.0, + "1871": 1.1273038155762993, + "1872": -0.0, + "1873": -0.0, + "1874": 0.9930927523600277, + "1875": 0.5123991005116678, + "1876": -0.0, + "1877": 1.4485879988088748, + "1878": -0.0, + "1879": -0.0, + "1880": 0.5847194829971978, + "1881": -0.0, + "1882": 0.008408260191310772, + "1883": 0.3331375229030007, + "1884": 0.004558632008431808, + "1885": -0.0, + "1886": 0.8907457013363456, + "1887": -0.0, + "1888": 0.004558632008431808, + "1889": 1.2475027007208284, + "1890": 0.14272526512497888, + "1891": 0.936503798944496, + "1892": 0.4349632231279392, + "1893": 0.062305319903472725, + "1894": -0.0, + "1895": 1.1671804480535735, + "1896": 0.03384824280250546, + "1897": -0.0, + "1898": 1.4124329124606765, + "1899": 0.009117084071181667, + "1900": -0.0, + "1901": 1.2840649657850873, + "1902": 0.004558632008431808, + "1903": -0.0, + "1904": 1.7297147558198414, + "1905": -0.0, + "1906": -0.0, + "1907": 1.5455402685721702, + "1908": -0.0, + "1909": -0.0, + "1910": 0.9998014513063453, + "1911": 0.5790198443426543, + "1912": -0.0, + "1913": 1.4028758978050009, + "1914": 0.1369308859661452, + "1915": 0.5478624659652629, + "1916": 0.6868707184832511, + "1917": 0.004558632008431808, + "1918": 0.011996370424748048, + "1919": 0.6924625120347147, + "1920": -0.0, + "1921": -0.0, + "1922": 0.7391458812830916, + "1923": -0.0, + "1924": -0.0, + "1925": 1.566537716196513, + "1926": -0.0, + "1927": -0.0, + "1928": 0.9421723132495494, + "1929": 0.23326191246084207, + "1930": -0.0, + "1931": 1.6036903816012864, + "1932": -0.0, + "1933": 0.004558632008431808, + "1934": 0.995769587153819, + "1935": -0.0, + "1936": -0.0, + "1937": 0.24506994559439965, + "1938": 0.004558632008431808, + "1939": -0.0, + "1940": 0.8892577525419989, + "1941": -0.0, + "1942": -0.0, + "1943": 0.2656359188305164, + "1944": 0.004558632008431808, + "1945": 0.004558632008431808, + "1946": 0.5162793276216688, + "1947": -0.0, + "1948": -0.0, + "1949": 0.9930377876912906, + "1950": 0.004558632008431808, + "1951": -0.0, + "1952": 1.7887924072980976, + "1953": 0.004558632008431808, + "1954": 0.009117084071181667, + "1955": -0.0, + "1956": 0.8801657493645801, + "1957": -0.0, + "1958": 0.030947290485022937, + "1959": 1.5366458616336887, + "1960": 0.156486662659969, + "1961": -0.0, + "1962": 1.072725302240463, + "1963": 0.9103308064887207, + "1964": -0.0, + "1965": 1.5067725344880374, + "1966": 0.41219474883009016, + "1967": -0.0, + "1968": 1.4415630952996288, + "1969": -0.0, + "1970": -0.0, + "1971": 0.9995965019024671, + "1972": -0.0, + "1973": -0.0, + "1974": 0.3467843858607602, + "1975": 0.5340167082282156, + "1976": -0.0, + "1977": 1.3632385905639304, + "1978": -0.0, + "1979": 0.03549356933557689, + "1980": 0.817778908647464, + "1981": -0.0, + "1982": 0.027989437753261202, + "1983": 0.9872468685334663, + "1984": 0.004558632008431808, + "1985": 0.021099273407728256, + "1986": 1.3111942837996442, + "1987": -0.0, + "1988": -0.0, + "1989": 1.702456156519467, + "1990": 0.5478624659652629, + "1991": 0.004558632008431808, + "1992": 1.3812622949369597, + "1993": -0.0, + "1994": 0.009117084071181667, + "1995": 1.5612870360125464, + "1996": 0.14715433008031384, + "1997": 0.18153029670765883, + "1998": 1.5493843564925334, + "1999": 0.6932148335159755, + "2000": 0.00841086938191613, + "2001": 1.9516859620934215, + "2002": 0.009117084071181667, + "2003": -0.0, + "2004": 1.1031003903943315, + "2005": -0.0, + "2006": 0.03384824280250546, + "2007": 0.3372900666170139, + "2008": 0.012969141435398991, + "2009": 0.495082954511632, + "2010": 1.7171553278347131, + "2011": 0.00841086938191613, + "2012": -0.0, + "2013": 0.9088401601182627, + "2014": 0.5592173492229093, + "2015": 0.0938423210460664, + "2016": 1.8963367777010713, + "2017": -0.0, + "2018": -0.0, + "2019": 0.6244720112260201, + "2020": 0.004558632008431808, + "2021": -0.0, + "2022": 0.7635664720759182, + "2023": 0.009117084071181667, + "2024": 0.004558632008431808, + "2025": 1.751734375243577, + "2026": -0.0, + "2027": -0.0, + "2028": 1.2050273615243994, + "2029": -0.0, + "2030": 0.00841086938191613, + "2031": 0.8753411923595547, + "2032": -0.0, + "2033": 0.00841086938191613, + "2034": 1.2408348151283093, + "2035": -0.0, + "2036": 0.004558632008431808, + "2037": 0.8996193330165028, + "2038": -0.0, + "2039": -0.0, + "2040": -0.0, + "2041": -0.0, + "2042": -0.0, + "2043": -0.0, + "2044": 0.030947290485022937, + "2045": 0.03669798673310072, + "2046": 0.9701968368880822, + "2047": 0.9995720505018473, + "2048": 0.04498278005850512, + "2049": 0.3863891966993886, + "2050": 1.0289513503781837, + "2051": 0.7293101928084332, + "2052": 1.1483584209098838, + "2053": -0.0, + "2054": 0.24637657474447852, + "2055": 0.9161626040248956, + "2056": 0.13817662574867837, + "2057": 0.9906260117677361, + "2058": 1.7294500257342778, + "2059": 1.1378617052284732, + "2060": 0.16664153293319858, + "2061": 1.590898030292923, + "2062": 0.011996370424748048, + "2063": 0.012969141435398991, + "2064": 0.9009414192902256, + "2065": 0.019966501192201943, + "2066": 0.05324451329650262, + "2067": 0.905930882330592, + "2068": 0.1527187474615828, + "2069": 0.004557202708826157, + "2070": 0.9570352115721551, + "2071": -0.0, + "2072": -0.0, + "2073": 0.3901715293002799, + "2074": 0.027989437753261202, + "2075": 0.004558632008431808, + "2076": 1.2713336059227043, + "2077": -0.0, + "2078": 0.10919224503612769, + "2079": 0.9161652125709273, + "2080": 0.844117001398134, + "2081": 0.004558632008431808, + "2082": 1.367714424356186, + "2083": 1.9309116011799135, + "2084": 1.0934621855444138, + "2085": 1.41050293295111, + "2086": 0.8602365347571979, + "2087": -0.0, + "2088": 1.3399600524418016, + "2089": -0.0, + "2090": -0.0, + "2091": 1.6753042332595418, + "2092": 0.00841086938191613, + "2093": -0.0, + "2094": 1.5598142269693223, + "2095": -0.0, + "2096": -0.0, + "2097": 0.8827535134758195, + "2098": -0.0, + "2099": -0.0, + "2100": 1.4274927912296584, + "2101": -0.0, + "2102": -0.0, + "2103": 1.5711677743340187, + "2104": -0.0, + "2105": -0.0, + "2106": 0.6549185266100823, + "2107": -0.0, + "2108": -0.0, + "2109": 0.8179159713516113, + "2110": 0.004558632008431808, + "2111": 0.015408589348188083, + "2112": 0.528507667117061, + "2113": -0.0, + "2114": 0.04125463583442048, + "2115": 1.031740782231136, + "2116": 0.04498278005850512, + "2117": 0.004558632008431808, + "2118": 1.5985058148871554, + "2119": 0.05253113543063514, + "2120": -0.0, + "2121": 0.21161767368014187, + "2122": 0.00841086938191613, + "2123": 0.004558632008431808, + "2124": 0.4147181912002278, + "2125": 0.004558632008431808, + "2126": -0.0, + "2127": 1.1410423217724128, + "2128": 0.019966501192201943, + "2129": 0.004558632008431808, + "2130": 0.9431161306278457, + "2131": -0.0, + "2132": -0.0, + "2133": 1.680748145747141, + "2134": 0.02322827564460493, + "2135": 0.09605307137149242, + "2136": 0.9983358099917485, + "2137": -0.0, + "2138": -0.0, + "2139": 1.8943255853764749, + "2140": 0.5171709353415874, + "2141": 0.49400858632900435, + "2142": 1.2076504731008786, + "2143": 0.38251722985842185, + "2144": 0.004558632008431808, + "2145": 0.058182259794557434, + "2146": 0.4743454375622397, + "2147": 0.478768955235481, + "2148": 0.6223938532881993, + "2149": 0.7066016044846831, + "2150": -0.0, + "2151": 1.073916075456056, + "2152": 0.09155947996597143, + "2153": -0.0, + "2154": 1.057009013675983, + "2155": 0.004558632008431808, + "2156": -0.0, + "2157": 1.3226101154051162, + "2158": 0.9771031610574555, + "2159": 0.9223754513106698, + "2160": 1.4447177325566969, + "2161": 0.46401083318039493, + "2162": 0.15259895254926945, + "2163": 1.4081427162193698, + "2164": -0.0, + "2165": -0.0, + "2166": 1.0991371964931669, + "2167": 0.1048664643797744, + "2168": -0.0, + "2169": 1.5064953388720328, + "2170": 0.39848163724604285, + "2171": 0.49185424518237375, + "2172": 1.0286222200128552, + "2173": -0.0, + "2174": -0.0, + "2175": 0.7659763399197513, + "2176": 0.7056834406332516, + "2177": -0.0, + "2178": 1.7060177820803903, + "2179": 0.015408589348188083, + "2180": 0.5037428055037617, + "2181": 1.303261472931049, + "2182": 0.6495608644967256, + "2183": 0.03950117460432034, + "2184": 0.9124661456634672, + "2185": -0.0, + "2186": 0.02040615956008207, + "2187": 1.5067072319283557, + "2188": 0.8725341244588215, + "2189": -0.0, + "2190": 1.6936240547222006, + "2191": 0.6537823628316408, + "2192": -0.0, + "2193": 1.33956480212069, + "2194": 0.02187247612535633, + "2195": 0.011996370424748048, + "2196": 0.6732632618237508, + "2197": -0.0, + "2198": -0.0, + "2199": 0.2369564867773527, + "2200": 0.004558632008431808, + "2201": 0.004558632008431808, + "2202": 0.9427183438923261, + "2203": 1.5578521255801503, + "2204": 0.5926977518417603, + "2205": 1.0094180874689593, + "2206": -0.0, + "2207": -0.0, + "2208": 0.515148222830203, + "2209": -0.0, + "2210": 0.00841086938191613, + "2211": 0.9872045166793905, + "2212": 0.00841086938191613, + "2213": 0.8491401345637986, + "2214": 0.7722051549338407, + "2215": 0.5033768748492929, + "2216": 0.018691910629194595, + "2217": 1.019134787781617, + "2218": 0.4929312325811471, + "2219": 0.004557202708826157, + "2220": 1.7100144215844537, + "2221": 0.00841086938191613, + "2222": 0.004558632008431808, + "2223": 0.9966495553973713, + "2224": -0.0, + "2225": -0.0, + "2226": 1.3694099219219296, + "2227": 0.9425349398144426, + "2228": 0.5558280685226146, + "2229": 1.5225767894736748, + "2230": 1.1019192920955896, + "2231": 0.829037933645733, + "2232": 1.6622133531671117, + "2233": 1.0385689928960973, + "2234": 0.5008555904875853, + "2235": 1.2773697525076833, + "2236": 0.9160686355253591, + "2237": 0.5283455746309721, + "2238": 1.0914457534492121, + "2239": 0.18153029670765883, + "2240": 0.18912285288949826, + "2241": 1.4053578730842462, + "2242": 0.011996370424748048, + "2243": 0.5649818394686076, + "2244": 0.37984996625005196, + "2245": 0.004558632008431808, + "2246": -0.0, + "2247": 0.9831491282282877, + "2248": -0.0, + "2249": 0.015408589348188083, + "2250": 0.9297786715137515, + "2251": -0.0, + "2252": 0.015408589348188083, + "2253": 0.6382022162573879, + "2254": 0.539446020762988, + "2255": 0.7481208707422049, + "2256": 1.1996923433213065, + "2257": 0.027402798515671886, + "2258": 0.015408589348188083, + "2259": 0.5600573486201667, + "2260": 0.032546628413335374, + "2261": 0.9407204265033048, + "2262": 0.9431627348362062, + "2263": 0.9555785123205885, + "2264": -0.0, + "2265": 1.5972253717782208, + "2266": 1.7123397946283552, + "2267": 1.029094159536494, + "2268": 1.538361210065107, + "2269": 0.0733277473245872, + "2270": -0.0, + "2271": 1.8123210977596567, + "2272": -0.0, + "2273": -0.0, + "2274": 0.9751614640254727, + "2275": 0.06059849870990301, + "2276": -0.0, + "2277": 0.9092140521837264, + "2278": 0.5514425318944173, + "2279": 0.09381385934518276, + "2280": 0.996326926367952, + "2281": 0.877777305261825, + "2282": -0.0, + "2283": 1.5357708133967458, + "2284": -0.0, + "2285": 0.004558632008431808, + "2286": 1.0256217220359822, + "2287": -0.0, + "2288": -0.0, + "2289": 1.1798891760196815, + "2290": 0.004558632008431808, + "2291": 0.00841086938191613, + "2292": 0.9379259879034595, + "2293": -0.0, + "2294": -0.0, + "2295": 0.4820661480830931, + "2296": -0.0, + "2297": 0.04226168037189109, + "2298": 0.9970159297491271, + "2299": 0.004558632008431808, + "2300": 0.004558632008431808, + "2301": 0.71091815377449, + "2302": 0.03950117460432034, + "2303": -0.0, + "2304": 1.5370854186313745, + "2305": 1.3925869031982465, + "2306": 0.004558632008431808, + "2307": 1.1738021911329044, + "2308": 1.0865582605232633, + "2309": 0.011996370424748048, + "2310": 0.706607559531584, + "2311": 0.01541331173734973, + "2312": 0.008416092913244634, + "2313": 1.2803254694349149, + "2314": 0.00456149344716018, + "2315": 0.00456149344716018, + "2316": 1.3477094783553394, + "2317": 0.5027145345383996, + "2318": 0.00456149344716018, + "2319": 0.13033238100756492, + "2320": 0.0232639099481316, + "2321": 0.9576918818816398, + "2322": 0.771863073426063, + "2323": 0.22884563753967158, + "2324": 0.08474964832038377, + "2325": 1.3184793107553097, + "2326": 0.00456149344716018, + "2327": -0.0, + "2328": 1.8763543041829642, + "2329": 0.6661936227494254, + "2330": 1.361355760273029, + "2331": 1.922003272787229, + "2332": 0.6488784374814528, + "2333": 0.5228010708308592, + "2334": 1.023417062725348, + "2335": 0.559343519677359, + "2336": 0.00456149344716018, + "2337": 1.4834312849783198, + "2338": 0.009125670848803863, + "2339": 0.14813402021721064, + "2340": 0.9396638009683924, + "2341": 0.8318606210552295, + "2342": 0.9424849899503377, + "2343": 1.1553758200650286, + "2344": -0.0, + "2345": 0.004560062254223774, + "2346": 1.383511597830815, + "2347": 0.01655958955361131, + "2348": 0.6617771257627917, + "2349": 0.9840772478810031, + "2350": 0.01541331173734973, + "2351": 0.036419538656714795, + "2352": 0.7360421279290053, + "2353": 1.0374825457418066, + "2354": 0.01200006770894612, + "2355": 0.15613721793477983, + "2356": 1.6839224409897255, + "2357": 0.9994220573951683, + "2358": 0.7037307160094499, + "2359": 0.1402091277306743, + "2360": 0.02781575464320728, + "2361": 1.7165030561564256, + "2362": 0.09830573830037181, + "2363": -0.0, + "2364": 1.483150543225253, + "2365": 0.016821018726719157, + "2366": 0.0729384137567519, + "2367": 0.72054529299606, + "2368": 0.7861467299088181, + "2369": 0.6006613362677841, + "2370": 1.2874440010830586, + "2371": 0.03028118386755254, + "2372": 0.019966501192201943, + "2373": 1.0400841123709217, + "2374": 1.2798666327454422, + "2375": -0.0, + "2376": 1.1336738826154413, + "2377": 0.012969141435398991, + "2378": 0.8655674142081036, + "2379": 0.5711462333809896, + "2380": 0.5929752370958719, + "2381": 0.17595327310218606, + "2382": 0.9878451186266797, + "2383": 0.9965730607415016, + "2384": 0.030947290485022937, + "2385": 1.4134583461964139, + "2386": 1.578074554413559, + "2387": 1.1317499137374616, + "2388": 1.7650806698048704, + "2389": 0.7632991348131324, + "2390": -0.0, + "2391": 0.3814803804236588, + "2392": 0.011996370424748048, + "2393": 0.3027509814712541, + "2394": 0.8724985611278149, + "2395": 0.6419205593105044, + "2396": 0.9788056134025809, + "2397": 0.6381717256767475, + "2398": -0.0, + "2399": -0.0, + "2400": 0.8435286343003573, + "2401": 0.6376531633670739, + "2402": 0.6441728336572883, + "2403": 0.6958631045015929, + "2404": 0.2913188260658172, + "2405": -0.0, + "2406": 1.456559250838871, + "2407": 0.9463792602566137, + "2408": -0.0, + "2409": 1.3652610943199814, + "2410": 0.05808366197506006, + "2411": -0.0, + "2412": 0.9810773440029494, + "2413": 1.0297607376268831, + "2414": 0.9417095524593226, + "2415": 0.8786110044098604, + "2416": 0.6209669454679965, + "2417": 0.5988395432423447, + "2418": 1.575324494783962, + "2419": 1.239687026660737, + "2420": 1.2475958943563128, + "2421": 0.5354134259501107, + "2422": 0.15853278647057656, + "2423": 0.5444961851670226, + "2424": 1.559817449797721, + "2425": 0.004558632008431808, + "2426": 0.16225553664051293, + "2427": 0.9557255550266806, + "2428": 1.375730199710675, + "2429": 1.6702278796049457, + "2430": 1.4380848447878591, + "2431": 0.9468767087486645, + "2432": -0.0, + "2433": 1.0408757959602926, + "2434": 0.49077426142528763, + "2435": 0.495082954511632, + "2436": 1.4188093888976796, + "2437": 0.6196493426237212, + "2438": -0.0, + "2439": 0.7806338861450853, + "2440": 0.5223782103000161, + "2441": 0.030947290485022937, + "2442": 0.5025517151011984, + "2443": 0.016554462405333748, + "2444": 0.004558632008431808, + "2445": 1.0870959273426446, + "2446": 0.211340499332759, + "2447": 0.5647223187975215, + "2448": 0.7737261513293187, + "2449": 0.08470065122868671, + "2450": 0.030947290485022937, + "2451": 1.0069770904857351, + "2452": 0.7000076224756427, + "2453": 1.1611763434501907, + "2454": 1.3770778898557479, + "2455": 0.06492306853095353, + "2456": -0.0, + "2457": 1.4852060492849244, + "2458": 1.5391021766101014, + "2459": 1.6238817918739805, + "2460": 1.5422286973503265, + "2461": 0.10048768237990234, + "2462": -0.0, + "2463": 1.1771059058579831, + "2464": 0.21968851516000296, + "2465": 0.04391156478640828, + "2466": 1.4339255090466247, + "2467": 0.004558632008431808, + "2468": 0.9352606981884335, + "2469": 0.9796969788000403, + "2470": 0.6320272201426423, + "2471": 0.026430027505020947, + "2472": 1.8534113523481985, + "2473": 1.3249583837199361, + "2474": 0.2357081579651628, + "2475": 1.1883757703204463, + "2476": 0.5490453082879074, + "2477": 1.008350025394986, + "2478": 0.7722335116616638, + "2479": 1.374939544155829, + "2480": 0.6688244934288541, + "2481": 1.0029760842791233, + "2482": 1.4464288320109726, + "2483": 0.5712501517296068, + "2484": 1.6276786810371209, + "2485": 0.7794570476701124, + "2486": 0.5076541732912703, + "2487": 1.8831437607746233, + "2488": -0.0, + "2489": 0.004558632008431808, + "2490": 0.7280201682922738, + "2491": 0.11246394358307388, + "2492": 0.2214651928576689, + "2493": 0.5900946201554902, + "2494": 0.5203846523653515, + "2495": 0.6418341594697798, + "2496": 0.8706738217436651, + "2497": 0.011996370424748048, + "2498": 0.05031761290692778, + "2499": 0.984607663402722, + "2500": 0.024963891203803882, + "2501": 0.015408589348188083, + "2502": 0.9344144628606217, + "2503": 1.3504839231219032, + "2504": 0.011996370424748048, + "2505": 1.609153182831775, + "2506": 0.9430278468079659, + "2507": 1.067606105510283, + "2508": 1.4224004631488296, + "2509": 0.46643884211702275, + "2510": 0.5514425318944173, + "2511": 1.971889850381705, + "2512": 0.021865835385137186, + "2513": 0.19793755725604503, + "2514": 1.3123232395534807, + "2515": 0.6300508206279384, + "2516": 0.004558632008431808, + "2517": 1.5860722163238274, + "2518": 0.2330642365906877, + "2519": 0.5436716226755172, + "2520": 0.6004041622226155, + "2521": 0.5616664896417098, + "2522": 0.5004269841857644, + "2523": 1.5051850752508842, + "2524": 0.45649615224043, + "2525": -0.0, + "2526": 1.8594772180021946, + "2527": 0.1800941072292793, + "2528": 0.7517156951807634, + "2529": 1.114650025269856, + "2530": 1.2459765657340116, + "2531": 1.263296532461162, + "2532": 1.4732011427001845, + "2533": 0.004558632008431808, + "2534": -0.0, + "2535": 1.4908049104454035, + "2536": 0.7671714152472651, + "2537": 0.00841086938191613, + "2538": 0.7592946698371152, + "2539": 0.53858731346426, + "2540": 0.4982949135071556, + "2541": 0.9490328726624924, + "2542": 0.03384824280250546, + "2543": 0.011996370424748048, + "2544": 0.9973450549468195, + "2545": -0.0, + "2546": 0.004558632008431808, + "2547": 0.6960722280945123, + "2548": -0.0, + "2549": -0.0, + "2550": 0.37085888662664834, + "2551": 0.279038685336629, + "2552": -0.0, + "2553": 0.9991851858575619, + "2554": 0.004558632008431808, + "2555": 0.5835013999704135, + "2556": 1.3457650995788897, + "2557": 0.004558632008431808, + "2558": -0.0, + "2559": 0.8196931416024, + "2560": 0.7778695444144853, + "2561": 0.08470065122868671, + "2562": 1.3628593730366716, + "2563": -0.0, + "2564": -0.0, + "2565": 0.9888270689934693, + "2566": 0.004558632008431808, + "2567": 0.004558632008431808, + "2568": 1.4465655374412776, + "2569": 0.6619287430660259, + "2570": 0.5656320225692425, + "2571": 1.4803553894522228, + "2572": 1.52939293370596, + "2573": 0.011996370424748048, + "2574": 1.5140423624204697, + "2575": 0.004558632008431808, + "2576": 0.012969141435398991, + "2577": 0.9197857491928894, + "2578": 0.5056070681421354, + "2579": -0.0, + "2580": 1.1539897312103478, + "2581": 0.8538903849051181, + "2582": 0.016554462405333748, + "2583": 0.7760337937693929, + "2584": 0.9295417673968425, + "2585": -0.0, + "2586": 1.481280299731856, + "2587": -0.0, + "2588": 0.00841086938191613, + "2589": 0.9132728049302757, + "2590": 0.5017258774946423, + "2591": -0.0, + "2592": 0.8342842906347382, + "2593": 0.015408589348188083, + "2594": 0.004558632008431808, + "2595": 0.9919711584202758, + "2596": 0.004558632008431808, + "2597": -0.0, + "2598": 1.6668836429584375, + "2599": 0.12806555660656896, + "2600": 0.018691910629194595, + "2601": 1.2782402168487705, + "2602": 0.495082954511632, + "2603": 0.12806555660656896, + "2604": 1.3525971306636086, + "2605": 0.009114225599005796, + "2606": 0.004558632008431808, + "2607": 0.9667136043363915, + "2608": 0.2640099916726362, + "2609": -0.0, + "2610": 0.7692996038915269, + "2611": 0.495082954511632, + "2612": 0.49615546156958523, + "2613": 0.40966544635008295, + "2614": 0.5740937125943305, + "2615": 0.00504731762119124, + "2616": 0.7917677771127233, + "2617": 0.15350187698721085, + "2618": -0.0, + "2619": 0.23870491334246352, + "2620": -0.0, + "2621": -0.0, + "2622": 1.2461716333232788, + "2623": 0.7682380575941845, + "2624": 0.9796599413501303, + "2625": 1.83984076095708, + "2626": 0.8447658019638316, + "2627": 0.9596734302383447, + "2628": 0.9995624538866346, + "2629": 0.15565999927972596, + "2630": 0.4497677108979744, + "2631": 0.8250112872323063, + "2632": 0.7472410579964712, + "2633": 0.6614497088161191, + "2634": 0.36093116231767, + "2635": 0.004562925588200431, + "2636": -0.0, + "2637": -0.0, + "2638": -0.0, + "2639": -0.0, + "2640": -0.0, + "2641": -0.0, + "2642": 0.4954323204713975, + "2643": 0.7108738011128924, + "2644": 0.6232687503978457, + "2645": 0.49670694558755585, + "2646": 1.2696702177333132, + "2647": 0.9497806167444498, + "2648": 0.5959137042724971, + "2649": 0.8272795419967187, + "2650": 1.0150831295349914, + "2651": 0.5719057252551343, + "2652": 1.8393125620351722, + "2653": 0.9718758910491263, + "2654": 0.026430027505020947, + "2655": 1.4106673486688328, + "2656": 0.02187247612535633, + "2657": 0.05736595329629651, + "2658": 0.5802252217354376, + "2659": 0.15221836895429272, + "2660": 0.5211898076332298, + "2661": 1.3662232144168103, + "2662": 0.49615546156958523, + "2663": 0.28998604703320907, + "2664": 0.6614119816583703, + "2665": 0.5028229331879049, + "2666": 0.5102589820354007, + "2667": 0.43383212559285483, + "2668": 0.6687202121989632, + "2669": 1.1606723683119529, + "2670": 1.3065952115803243, + "2671": 1.3706171185203329, + "2672": 0.3220808136480647, + "2673": 1.365127797763443, + "2674": 0.6048799541953233, + "2675": 0.08807628692513984, + "2676": 0.5928860266568101, + "2677": 1.3064143027760613, + "2678": 0.580630107561114, + "2679": 1.6410461276130615, + "2680": 1.365904522851015, + "2681": 1.422264352559779, + "2682": 1.152021746921201, + "2683": 0.7937451233261963, + "2684": 0.2633895310302454, + "2685": 1.6515514228968509, + "2686": 0.6052242070180753, + "2687": 0.5582366887318038, + "2688": 1.3221793455166666, + "2689": -0.0, + "2690": 1.2987949406953985, + "2691": 1.2987949406953985, + "2692": -0.0, + "2693": 1.2987949406953985, + "2694": -0.0, + "2695": -0.0, + "2696": 0.9463539430289056, + "2697": 1.8704779943716576, + "2698": 0.7723167155065078, + "2699": 1.9506077773300574, + "2700": 1.0335303981279675, + "2701": 1.2099126428714633, + "2702": 1.4318610950265134, + "2703": 0.6752674350499968, + "2704": 1.683958109393831, + "2705": 1.342813874888794, + "2706": 0.4446485703739006, + "2707": 0.6501918722561135, + "2708": 1.0913190868632134, + "2709": 0.68824987338777, + "2710": 0.7872619174740242, + "2711": 1.8550608094976462, + "2712": 0.30455134768656117, + "2713": 1.2723895972696009, + "2714": 1.2353775926271349, + "2715": 1.3791253242303576, + "2716": 1.109602602650071, + "2717": 0.6853632938293021, + "2718": 0.1048664643797744, + "2719": 0.6266534971040233, + "2720": 1.4722838163965783, + "2721": 0.18857489459122276, + "2722": 0.2789051832374101, + "2723": 1.0833950774774628, + "2724": 0.8073033980637729, + "2725": 0.19991799730540105, + "2726": 1.3954685780489886, + "2727": 1.0032290789332172, + "2728": 0.6937236094343733, + "2729": 0.8022079019381971, + "2730": 0.28889080012190105, + "2731": 0.17219058007197371, + "2732": 0.2702122029255668, + "2733": 0.6035413433295048, + "2734": 0.46738792820985625, + "2735": 0.3754327009607475, + "2736": 1.264263088066902, + "2737": 0.464114075214175, + "2738": 0.2970950900878671, + "2739": 1.411329734250237, + "2740": 1.0383675307713103, + "2741": 0.4787189842874042, + "2742": 1.1194353438292233, + "2743": 0.10922700954383989, + "2744": 0.5073927004583846, + "2745": 1.948143826464563, + "2746": 0.4638338557591312, + "2747": -0.0, + "2748": -0.0, + "2749": -0.0, + "2750": 0.48203776194266645, + "2751": 1.1327955763536115, + "2752": 0.3921487851943259, + "2753": 0.5559314790287431, + "2754": 1.3798591623158332, + "2755": 0.9066581720604686, + "2756": 0.9505269136418784, + "2757": 1.1658816262607896, + "2758": 0.8298319259085895, + "2759": 0.004558632008431808, + "2760": 1.486200738577959, + "2761": 0.8478682131899566, + "2762": 0.7424867892736189, + "2763": 1.7317724059550152, + "2764": 0.5651793802278214, + "2765": 0.02040615956008207, + "2766": 1.2334776033717545, + "2767": 0.9983570640737065, + "2768": 0.5401229010835484, + "2769": 1.7313273443731756, + "2770": 0.07531202940181617, + "2771": 0.023818018146658217, + "2772": 0.3569346169260101, + "2773": 0.15125004429561595, + "2774": 0.5435644431995964, + "2775": 1.3687463314340282, + "2776": 0.5395860528143321, + "2777": 0.2558582883138078, + "2778": 1.0133087948665, + "2779": 1.512120959646182, + "2780": 1.195725209340769, + "2781": 1.6875590687155493, + "2782": -0.0, + "2783": -0.0, + "2784": 0.9923171912778702, + "2785": 0.004558632008431808, + "2786": 0.00841086938191613, + "2787": 1.8429949228600262, + "2788": 0.004558632008431808, + "2789": 0.023249642272916406, + "2790": 0.1134675757460791, + "2791": -0.0, + "2792": 0.00841086938191613, + "2793": 0.9846787291238221, + "2794": 0.004558632008431808, + "2795": 0.004558632008431808, + "2796": 1.6815931990237378, + "2797": 0.012969141435398991, + "2798": 0.004558632008431808, + "2799": 0.8558160854937538, + "2800": -0.0, + "2801": 0.009117084071181667, + "2802": 0.15454707537057458, + "2803": 0.004558632008431808, + "2804": -0.0, + "2805": 0.8079028516914302, + "2806": 1.0887601443504165, + "2807": 0.754217395172613, + "2808": 1.1578833300267504, + "2809": 0.06806492906415407, + "2810": 0.07291717648870925, + "2811": 0.8951575082084438, + "2812": 0.5611451424948515, + "2813": -0.0, + "2814": 1.437166391610994, + "2815": 0.08844386452340516, + "2816": 0.07890395477411866, + "2817": 0.6097574339675325, + "2818": 0.1326151125470255, + "2819": 0.184310219778078, + "2820": 0.17153491026334516, + "2821": 0.07291717648870925, + "2822": 0.004558632008431808, + "2823": 1.0667610521361441, + "2824": 0.004558632008431808, + "2825": 0.004558632008431808, + "2826": 0.345512690458312, + "2827": 0.07505605527651306, + "2828": 0.07291717648870925, + "2829": 1.085818902296825, + "2830": -0.0, + "2831": 0.011996370424748048, + "2832": 1.381735104938196, + "2833": -0.0, + "2834": -0.0, + "2835": 0.9110790298713758, + "2836": 0.00841086938191613, + "2837": -0.0, + "2838": 1.5778392512912505, + "2839": 0.403748208793314, + "2840": 0.39567679409843926, + "2841": 0.951225693525509, + "2842": -0.0, + "2843": -0.0, + "2844": 0.9258690517197423, + "2845": -0.0, + "2846": 0.004558632008431808, + "2847": 1.6531496313834917, + "2848": 0.7529851568361462, + "2849": -0.0, + "2850": 1.2174442829087535, + "2851": -0.0, + "2852": 0.015408589348188083, + "2853": 0.7741251017824405, + "2854": -0.0, + "2855": -0.0, + "2856": 0.09605307137149242, + "2857": -0.0, + "2858": -0.0, + "2859": 0.9994390012728576, + "2860": -0.0, + "2861": -0.0, + "2862": 0.1026838682945454, + "2863": 0.009114225599005796, + "2864": -0.0, + "2865": 0.9968905544658158, + "2866": 0.004558632008431808, + "2867": -0.0, + "2868": 1.0554700664137528, + "2869": -0.0, + "2870": -0.0, + "2871": 0.3291903198745072, + "2872": -0.0, + "2873": 0.478768955235481, + "2874": 0.3261539992314597, + "2875": -0.0, + "2876": -0.0, + "2877": 0.528507667117061, + "2878": 0.015408589348188083, + "2879": 0.004558632008431808, + "2880": 0.953649863991451, + "2881": 0.06366205652738521, + "2882": -0.0, + "2883": 1.5523809210749702, + "2884": -0.0, + "2885": 0.015408589348188083, + "2886": 0.5485004558178874, + "2887": -0.0, + "2888": -0.0, + "2889": 0.9595443125271582, + "2890": -0.0, + "2891": -0.0, + "2892": 0.9752901744588084, + "2893": 0.0870033740594503, + "2894": 0.027989437753261202, + "2895": 1.0441328811814483, + "2896": 0.1893673142095263, + "2897": 0.03669798673310072, + "2898": 0.6939200911160944, + "2899": -0.0, + "2900": -0.0, + "2901": 1.844741368754117, + "2902": 0.023249642272916402, + "2903": 0.25781324167692987, + "2904": 0.7281892021803831, + "2905": -0.0, + "2906": 0.004558632008431808, + "2907": 0.37856019403585656, + "2908": 0.03669798673310072, + "2909": -0.0, + "2910": 1.2055733698951523, + "2911": 0.004558632008431808, + "2912": -0.0, + "2913": 0.5267107019937469, + "2914": 0.004558632008431808, + "2915": -0.0, + "2916": 0.9996761879242776, + "2917": -0.0, + "2918": -0.0, + "2919": 0.9161626040248956, + "2920": -0.0, + "2921": 0.004558632008431808, + "2922": 0.789309777659426, + "2923": 0.018691910629194595, + "2924": -0.0, + "2925": 1.5363270792288692, + "2926": -0.0, + "2927": 0.03386560351697576, + "2928": 0.999912579417076, + "2929": 0.004558632008431808, + "2930": 0.023249642272916406, + "2931": 0.5057251388694349, + "2932": 0.4875229918975016, + "2933": -0.0, + "2934": 1.0467954488570808, + "2935": 0.004558632008431808, + "2936": 0.00841086938191613, + "2937": 0.30778693535472085, + "2938": 0.5494827677177796, + "2939": 0.9758415588521654, + "2940": 1.4089037350981821, + "2941": -0.0, + "2942": 0.03384824280250546, + "2943": 0.4608842608134732, + "2944": -0.0, + "2945": 0.6962122601251458, + "2946": 0.8112781244591328, + "2947": 0.026430027505020947, + "2948": 0.07531202940181617, + "2949": 0.6479001630857892, + "2950": 0.06806492906415407, + "2951": 0.06806492906415407, + "2952": 0.7460842357860187, + "2953": -0.0, + "2954": 0.015408589348188083, + "2955": 0.6962122601251458, + "2956": 1.0353609237823351, + "2957": -0.0, + "2958": 1.3062440990878414, + "2959": 0.00841086938191613, + "2960": 0.004558632008431808, + "2961": 0.6365983204576533, + "2962": 0.5036113409678216, + "2963": -0.0, + "2964": 0.9124625137783046, + "2965": 0.046349389172333666, + "2966": -0.0, + "2967": 0.5233729759176726, + "2968": 0.5113292574029226, + "2969": 0.9230584523830132, + "2970": 0.3819520940782511, + "2971": 0.023249642272916402, + "2972": 0.019966501192201943, + "2973": 1.7141727252194914, + "2974": -0.0, + "2975": 0.004558632008431808, + "2976": 1.8982414009259632, + "2977": -0.0, + "2978": -0.0, + "2979": 1.001573026739273, + "2980": -0.0, + "2981": -0.0, + "2982": 0.9839812759664496, + "2983": 0.1690340469048578, + "2984": -0.0, + "2985": 0.3274729427059224, + "2986": 0.004558632008431808, + "2987": -0.0, + "2988": 0.3162419019818901, + "2989": 0.015408589348188083, + "2990": 0.011996370424748048, + "2991": 0.11284873166174963, + "2992": -0.0, + "2993": -0.0, + "2994": 0.7182513129443763, + "2995": 0.00841086938191613, + "2996": 0.00841086938191613, + "2997": 0.8761109744531423, + "2998": -0.0, + "2999": 0.004558632008431808, + "3000": 0.920706721516314, + "3001": 0.02187247612535633, + "3002": 0.035504300689473266, + "3003": 0.48244296850532675, + "3004": 0.8801657493645801, + "3005": 0.9224749626859488, + "3006": 0.5470124194857456, + "3007": 0.009117084071181667, + "3008": 0.03950117460432034, + "3009": 0.9961852825346093, + "3010": 0.015408589348188083, + "3011": -0.0, + "3012": 0.8341147243028089, + "3013": 0.5533958420416525, + "3014": -0.0, + "3015": 1.7520899822297227, + "3016": -0.0, + "3017": 0.004558632008431808, + "3018": 0.9895776905440088, + "3019": 0.15193930925028848, + "3020": 0.02187247612535633, + "3021": 1.0024160343829565, + "3022": 0.10919224503612769, + "3023": -0.0, + "3024": 1.2237098861958715, + "3025": -0.0, + "3026": -0.0, + "3027": 0.8249721734006824, + "3028": 0.9818724146381428, + "3029": 0.00841086938191613, + "3030": 1.8233864811648979, + "3031": -0.0, + "3032": -0.0, + "3033": 1.3559578032480588, + "3034": 0.03384824280250546, + "3035": 0.004558632008431808, + "3036": 1.143630119879612, + "3037": 0.01996035309148369, + "3038": 0.45518915954838735, + "3039": 0.40891171129390114, + "3040": -0.0, + "3041": 0.047653158621415205, + "3042": 0.6417583954551226, + "3043": -0.0, + "3044": -0.0, + "3045": 0.6091329320137322, + "3046": 0.9147242150989261, + "3047": -0.0, + "3048": 1.5630485825086937, + "3049": -0.0, + "3050": 0.09827754424908373, + "3051": 0.9118083450154382, + "3052": -0.0, + "3053": -0.0, + "3054": 0.9635394466445162, + "3055": -0.0, + "3056": -0.0, + "3057": 0.9915618138024099, + "3058": 0.05031761290692778, + "3059": -0.0, + "3060": 0.9571995804489173, + "3061": 0.09433387217493736, + "3062": 0.7713087148030495, + "3063": 1.3084901020982338, + "3064": 1.348643283958556, + "3065": 0.6330057003972562, + "3066": 1.6188753028918685, + "3067": 0.6999324887366891, + "3068": -0.0, + "3069": 1.5915042232837966, + "3070": -0.0, + "3071": -0.0, + "3072": 1.773169995019586, + "3073": 0.9921053123692025, + "3074": -0.0, + "3075": 1.4776424217553614, + "3076": 0.16151470039260452, + "3077": -0.0, + "3078": 1.3662136844939032, + "3079": 0.023242515416866845, + "3080": 0.004557202708826157, + "3081": 0.9959497814920797, + "3082": -0.0, + "3083": -0.0, + "3084": 1.4584656408449352, + "3085": 0.3852434633292361, + "3086": 0.13817662574867837, + "3087": 1.3606950422449975, + "3088": -0.0, + "3089": -0.0, + "3090": 1.097098790989321, + "3091": 0.021865835385137186, + "3092": -0.0, + "3093": 0.965131705642295, + "3094": 0.03950117460432034, + "3095": 0.004558632008431808, + "3096": 0.9386489065040604, + "3097": -0.0, + "3098": 0.17826828772609793, + "3099": 0.9965420602740251, + "3100": 0.030947290485022937, + "3101": 0.00841086938191613, + "3102": 0.9097175179828623, + "3103": -0.0, + "3104": 0.4842546285714299, + "3105": 1.0477413954381434, + "3106": 0.01655446240533375, + "3107": 0.004558632008431808, + "3108": 1.0362504812890168, + "3109": -0.0, + "3110": -0.0, + "3111": 1.3666968950480196, + "3112": -0.0, + "3113": -0.0, + "3114": 0.6975024418987791, + "3115": -0.0, + "3116": -0.0, + "3117": 0.6282609013381986, + "3118": 0.4993618688976174, + "3119": 0.02187247612535633, + "3120": 0.8639859310810012, + "3121": -0.0, + "3122": -0.0, + "3123": 1.5703240488750976, + "3124": 0.004558632008431808, + "3125": 0.1134675757460791, + "3126": 1.0040686716466796, + "3127": 0.004558632008431808, + "3128": -0.0, + "3129": 1.4603644597708394, + "3130": 0.019966501192201943, + "3131": 0.047667280377380425, + "3132": 1.4654492783338695, + "3133": 0.7376042360488695, + "3134": 0.024967559478864067, + "3135": 0.8244227789808984, + "3136": -0.0, + "3137": -0.0, + "3138": -0.0, + "3139": -0.0, + "3140": -0.0, + "3141": 1.2805878370748447, + "3142": -0.0, + "3143": -0.0, + "3144": 0.9442776940289861, + "3145": -0.0, + "3146": -0.0, + "3147": 0.9960299558952574, + "3148": 0.9967270522761156, + "3149": 0.5123991005116678, + "3150": 0.3071769437409178, + "3151": 0.14805123138918835, + "3152": -0.0, + "3153": 1.1272445875970236, + "3154": 0.0606162867179846, + "3155": 0.13426881084202386, + "3156": 0.4954946041634167, + "3157": -0.0, + "3158": -0.0, + "3159": 1.41463323048224, + "3160": 0.14471825086631987, + "3161": -0.0, + "3162": 0.546406641438844, + "3163": 0.004558632008431808, + "3164": -0.0, + "3165": 0.25924882001691885, + "3166": 0.009117084071181667, + "3167": 0.026430027505020947, + "3168": 0.3952233997283588, + "3169": 0.004558632008431808, + "3170": 0.004558632008431808, + "3171": 0.658156924561849, + "3172": -0.0, + "3173": 0.8261709752050294, + "3174": 0.5708699783475161, + "3175": 0.5808297213840253, + "3176": 0.004558632008431808, + "3177": 1.7246640416404106, + "3178": 0.9866967086735614, + "3179": 0.9609413432710876, + "3180": 1.026396631566985, + "3181": 0.004558632008431808, + "3182": -0.0, + "3183": 0.46201711921136657, + "3184": -0.0, + "3185": -0.0, + "3186": 0.5735233518360207, + "3187": -0.0, + "3188": 0.004558632008431808, + "3189": 1.0341438164624344, + "3190": -0.0, + "3191": -0.0, + "3192": 1.3156349922517803, + "3193": 0.015408589348188083, + "3194": -0.0, + "3195": 0.7938843929092816, + "3196": 0.004558632008431808, + "3197": -0.0, + "3198": 0.6771639377588354, + "3199": 0.8280803359716022, + "3200": -0.0, + "3201": 1.5018878615067264, + "3202": -0.0, + "3203": -0.0, + "3204": -0.0, + "3205": -0.0, + "3206": -0.0, + "3207": 1.6981093088530685, + "3208": 0.7436907569226188, + "3209": 0.004558632008431808, + "3210": 0.9437980407974101, + "3211": 0.011996370424748048, + "3212": 0.004558632008431808, + "3213": 0.9162713583946192, + "3214": -0.0, + "3215": 0.004558632008431808, + "3216": 1.0705653385690308, + "3217": 0.4993618688976174, + "3218": 1.2208479434460533, + "3219": 0.7672856008265216, + "3220": 0.13010773862336378, + "3221": -0.0, + "3222": 0.7397424428545377, + "3223": -0.0, + "3224": -0.0, + "3225": 1.1735177606455371, + "3226": 0.6909542991086338, + "3227": 0.004558632008431808, + "3228": 1.1515417528857825, + "3229": -0.0, + "3230": -0.0, + "3231": 1.3827164802715837, + "3232": -0.0, + "3233": -0.0, + "3234": -0.0, + "3235": -0.0, + "3236": 0.023249642272916402, + "3237": 1.2764455499157692, + "3238": -0.0, + "3239": -0.0, + "3240": 0.6152919339429441, + "3241": -0.0, + "3242": -0.0, + "3243": -0.0, + "3244": 0.004558632008431808, + "3245": -0.0, + "3246": 1.6671549443716582, + "3247": 0.00841086938191613, + "3248": -0.0, + "3249": 1.5959983717532287, + "3250": 0.5630666297037678, + "3251": -0.0, + "3252": -0.0, + "3253": 1.3760413834235095, + "3254": 0.004558632008431808, + "3255": 0.5601820359177964, + "3256": 0.9434076910134437, + "3257": 0.3089820795681674, + "3258": -0.0, + "3259": 1.3642091753462473, + "3260": 0.5206952968387414, + "3261": 0.00841086938191613, + "3262": 1.383436042728881, + "3263": 0.11133606685705028, + "3264": 0.00841086938191613, + "3265": 0.6255940110034887, + "3266": 0.012969141435398991, + "3267": 0.00841086938191613, + "3268": 0.6399701850271089, + "3269": 0.5212488983740526, + "3270": 0.015408589348188083, + "3271": 0.31302666804579615, + "3272": 0.016821018726719157, + "3273": 0.00841086938191613, + "3274": 1.5851298099979876, + "3275": 0.004558632008431808, + "3276": 0.012969141435398991, + "3277": 0.961321038241143, + "3278": 0.00841086938191613, + "3279": -0.0, + "3280": 1.2290354204102618, + "3281": 0.5553460809259386, + "3282": 0.004558632008431808, + "3283": 1.4266875248139854, + "3284": 0.004558632008431808, + "3285": 0.00841086938191613, + "3286": 1.145189488983809, + "3287": 1.4653664015172727, + "3288": 0.8154467529520124, + "3289": 1.0969601131673812, + "3290": 0.12601300227102405, + "3291": 0.13817662574867837, + "3292": 1.599520935068864, + "3293": 1.032221368872761, + "3294": 0.9927335050778394, + "3295": 1.165425170539518, + "3296": 0.5335452957901158, + "3297": 0.983534269147935, + "3298": 1.4376683271829716, + "3299": -0.0, + "3300": 0.009117084071181667, + "3301": 0.9001303755868797, + "3302": 1.3679990493810528, + "3303": 0.9240527439798402, + "3304": 1.122059018200555, + "3305": -0.0, + "3306": 0.011996370424748048, + "3307": 0.699190794350496, + "3308": -0.0, + "3309": -0.0, + "3310": 0.7601988389655101, + "3311": 0.03669798673310072, + "3312": 0.024967559478864067, + "3313": 1.4128242480344055, + "3314": 0.8213208401745362, + "3315": 0.5067793209468459, + "3316": 1.2715019777305787, + "3317": 0.235584087181565, + "3318": 0.0555240318366822, + "3319": 0.7647709756933894, + "3320": 0.02187247612535633, + "3321": 0.22704204359201863, + "3322": 1.206797287583201, + "3323": -0.0, + "3324": -0.0, + "3325": 0.6055824751243901, + "3326": 0.21357981533827733, + "3327": 0.018691910629194595, + "3328": 1.5317262212963576, + "3329": -0.0, + "3330": -0.0, + "3331": 0.8899188332812512, + "3332": 0.9662692174083959, + "3333": -0.0, + "3334": 1.7863179161316582, + "3335": 0.015408589348188083, + "3336": -0.0, + "3337": 0.4797561769672548, + "3338": -0.0, + "3339": 0.1401697950009077, + "3340": 0.9960299558952574, + "3341": 0.14412845038558464, + "3342": 0.14272526512497888, + "3343": 1.088341919251423, + "3344": -0.0, + "3345": -0.0, + "3346": 1.6652686914769936, + "3347": -0.0, + "3348": -0.0, + "3349": 0.8890885844488643, + "3350": -0.0, + "3351": -0.0, + "3352": 0.9788819438370426, + "3353": 0.004558632008431808, + "3354": -0.0, + "3355": 0.9524946221029208, + "3356": 0.5592173492229093, + "3357": 0.1361740102464381, + "3358": 1.631754731634954, + "3359": 0.6349296672857434, + "3360": -0.0, + "3361": 1.4286263826257022, + "3362": 0.38890223229687704, + "3363": 0.004558632008431808, + "3364": 0.9703077560169396, + "3365": 0.004558632008431808, + "3366": -0.0, + "3367": 0.5485004558178874, + "3368": 0.015408589348188083, + "3369": -0.0, + "3370": 0.5390553647610652, + "3371": 0.030947290485022937, + "3372": 0.515148222830203, + "3373": 0.8357433751178939, + "3374": 0.19069197370444047, + "3375": -0.0, + "3376": 0.5598622240703925, + "3377": 0.018691910629194595, + "3378": -0.0, + "3379": 1.0260174085540565, + "3380": 0.012969141435398991, + "3381": -0.0, + "3382": 0.9956424633001117, + "3383": 1.1014586364849297, + "3384": 0.03384824280250546, + "3385": 1.3106061275132057, + "3386": -0.0, + "3387": 0.012969141435398991, + "3388": 0.655730044009409, + "3389": -0.0, + "3390": 0.00841086938191613, + "3391": 1.0054678370274983, + "3392": 0.4539714858930989, + "3393": 0.44249665217658396, + "3394": 1.5733027712214989, + "3395": -0.0, + "3396": -0.0, + "3397": 1.6254949252544804, + "3398": 0.532809176140285, + "3399": -0.0, + "3400": 0.5630583832300876, + "3401": 0.4972261128105194, + "3402": 0.004558632008431808, + "3403": 1.3256457248802884, + "3404": 0.8823243593813666, + "3405": -0.0, + "3406": 1.0459213563684622, + "3407": -0.0, + "3408": -0.0, + "3409": 0.7279601224851079, + "3410": -0.0, + "3411": -0.0, + "3412": 0.6055824751243901, + "3413": -0.0, + "3414": -0.0, + "3415": 1.1381328172096947, + "3416": 0.004558632008431808, + "3417": 0.004558632008431808, + "3418": 1.6287799661778353, + "3419": -0.0, + "3420": 0.00841086938191613, + "3421": 1.5013806076177907, + "3422": -0.0, + "3423": 0.00841086938191613, + "3424": 0.9773964359690213, + "3425": -0.0, + "3426": -0.0, + "3427": 1.1659631116108025, + "3428": -0.0, + "3429": -0.0, + "3430": 1.0389019027138504, + "3431": -0.0, + "3432": 0.004558632008431808, + "3433": 1.2550779710661448, + "3434": 0.5262189260247546, + "3435": 1.3878427045133819, + "3436": 1.5529484648981005, + "3437": 0.7205527169252, + "3438": -0.0, + "3439": 1.4662962405142328, + "3440": 1.5996260309398427, + "3441": 0.011996370424748048, + "3442": 1.4912902822598524, + "3443": 0.03669798673310072, + "3444": 0.011996370424748048, + "3445": 0.3742919087315201, + "3446": 0.38370354489338954, + "3447": 0.004558632008431808, + "3448": 0.7932823392197375, + "3449": 0.012969141435398991, + "3450": 0.030947290485022937, + "3451": 0.9628835607466779, + "3452": 0.7715795408173935, + "3453": 0.00841086938191613, + "3454": 1.5840873618930358, + "3455": 1.2941047604625058, + "3456": -0.0, + "3457": 1.612197994995665, + "3458": 0.004558632008431808, + "3459": 0.011996370424748048, + "3460": 1.4019757596262548, + "3461": -0.0, + "3462": -0.0, + "3463": 1.3193698676033456, + "3464": -0.0, + "3465": 0.00841086938191613, + "3466": 0.9730185000650986, + "3467": 0.5591046126018521, + "3468": 0.00841086938191613, + "3469": 0.998384139566282, + "3470": 0.02187247612535633, + "3471": -0.0, + "3472": 0.5498798069557929, + "3473": 0.012969141435398991, + "3474": 0.00841086938191613, + "3475": 1.2123560311140065, + "3476": 0.5744647066778185, + "3477": -0.0, + "3478": 1.7484656884973067, + "3479": 0.00841086938191613, + "3480": -0.0, + "3481": 0.26374785047396426, + "3482": 0.027989437753261202, + "3483": 0.7123214061123588, + "3484": 1.4773953470948096, + "3485": 0.1421536833620245, + "3486": -0.0, + "3487": 0.9100060737277593, + "3488": -0.0, + "3489": -0.0, + "3490": 0.004558632008431808, + "3491": -0.0, + "3492": 0.004558632008431808, + "3493": 1.6016061256111502, + "3494": -0.0, + "3495": -0.0, + "3496": 1.4963049914814914, + "3497": -0.0, + "3498": 0.004558632008431808, + "3499": 0.9586552834292853, + "3500": -0.0, + "3501": 0.004558632008431808, + "3502": 1.1657434861043832, + "3503": 0.5198835724355741, + "3504": -0.0, + "3505": 0.6309899130960951, + "3506": 0.004558632008431808, + "3507": -0.0, + "3508": 0.00841086938191613, + "3509": -0.0, + "3510": 0.30033280226684855, + "3511": 0.8157247963561309, + "3512": 0.027989437753261202, + "3513": 0.004558632008431808, + "3514": 1.3522004113157353, + "3515": -0.0, + "3516": -0.0, + "3517": 0.9288552887831651, + "3518": -0.0, + "3519": 0.004558632008431808, + "3520": 1.6995188972391, + "3521": 0.7321197669116217, + "3522": 0.07050175960541472, + "3523": 1.0837683453682998, + "3524": 0.07768710261649714, + "3525": 0.8050635993610495, + "3526": 1.8857479426704558, + "3527": 0.1645911064701647, + "3528": -0.0, + "3529": 0.8768073759428768, + "3530": -0.0, + "3531": -0.0, + "3532": 1.7486821117937348, + "3533": -0.0, + "3534": -0.0, + "3535": 1.9735256821969835, + "3536": 0.004558632008431808, + "3537": 0.004558632008431808, + "3538": 0.8297578686506993, + "3539": -0.0, + "3540": -0.0, + "3541": -0.0, + "3542": -0.0, + "3543": -0.0, + "3544": 1.602069297572549, + "3545": -0.0, + "3546": -0.0, + "3547": 0.004558632008431808, + "3548": 0.798731762025778, + "3549": -0.0, + "3550": 1.7567439597719579, + "3551": 0.11558705379019918, + "3552": -0.0, + "3553": 1.3629794393530286, + "3554": 0.004558632008431808, + "3555": 0.004558632008431808, + "3556": 1.2160251912379179, + "3557": -0.0, + "3558": -0.0, + "3559": 1.3446281721006104, + "3560": 0.5057251388694349, + "3561": -0.0, + "3562": 1.3730434098547162, + "3563": -0.0, + "3564": -0.0, + "3565": 0.9694879058169312, + "3566": -0.0, + "3567": -0.0, + "3568": 1.5073195737241347, + "3569": -0.0, + "3570": -0.0, + "3571": 0.9998261127843291, + "3572": 0.7722051549338407, + "3573": 0.5865644620293555, + "3574": 1.477006249923198, + "3575": -0.0, + "3576": -0.0, + "3577": -0.0, + "3578": -0.0, + "3579": 0.009117084071181667, + "3580": 0.9748143438289252, + "3581": 0.8633994795413009, + "3582": -0.0, + "3583": 1.574944588957372, + "3584": -0.0, + "3585": -0.0, + "3586": 1.406330459461833, + "3587": -0.0, + "3588": 0.004558632008431808, + "3589": 1.4526932108925168, + "3590": 0.5203212363655557, + "3591": 0.6553760681258232, + "3592": 1.5919470519352377, + "3593": 0.00841086938191613, + "3594": -0.0, + "3595": 1.250813427798298, + "3596": -0.0, + "3597": 0.004558632008431808, + "3598": 0.9078763835088532, + "3599": -0.0, + "3600": -0.0, + "3601": 0.9587472081094662, + "3602": 0.004558632008431808, + "3603": 0.004558632008431808, + "3604": 1.0036720099089382, + "3605": -0.0, + "3606": -0.0, + "3607": 1.2743173783739747, + "3608": -0.0, + "3609": -0.0, + "3610": 0.9805056644660266, + "3611": 0.004558632008431808, + "3612": -0.0, + "3613": 1.382746829040062, + "3614": -0.0, + "3615": -0.0, + "3616": 0.5835360617452583, + "3617": 0.1686359355745089, + "3618": -0.0, + "3619": 0.962833681618395, + "3620": -0.0, + "3621": 0.011996370424748048, + "3622": 0.6894413145355469, + "3623": -0.0, + "3624": -0.0, + "3625": 0.9795963366848084, + "3626": 0.4875229918975016, + "3627": -0.0, + "3628": 1.4608266742925768, + "3629": -0.0, + "3630": 0.11133606685705028, + "3631": 1.8155014473216675, + "3632": 0.004558632008431808, + "3633": 0.018691910629194595, + "3634": 0.5836653780444216, + "3635": -0.0, + "3636": -0.0, + "3637": 0.42696111066294334, + "3638": 0.8022776088655832, + "3639": 0.8346253570010771, + "3640": 1.397649393821871, + "3641": 0.79756781657501, + "3642": -0.0, + "3643": 1.377309115620335, + "3644": 0.018691910629194595, + "3645": 0.23821648214729435, + "3646": 0.3492086951089471, + "3647": 0.5088822762201008, + "3648": 0.5088822762201008, + "3649": 1.3007773625590915, + "3650": -0.0, + "3651": -0.0, + "3652": 1.4711925111318234, + "3653": 0.004558632008431808, + "3654": 0.004557202708826157, + "3655": 1.3868931232481836, + "3656": -0.0, + "3657": -0.0, + "3658": 0.730044927881875, + "3659": -0.0, + "3660": 0.004558632008431808, + "3661": 1.7915893639377463, + "3662": -0.0, + "3663": 0.004558632008431808, + "3664": 1.5356443828497137, + "3665": 0.004558632008431808, + "3666": -0.0, + "3667": 1.602996971721968, + "3668": 0.009117084071181667, + "3669": 0.004558632008431808, + "3670": 1.3755978721588735, + "3671": 0.16151470039260452, + "3672": 0.004558632008431808, + "3673": 1.012496696342062, + "3674": -0.0, + "3675": 0.004558632008431808, + "3676": 1.701154504846931, + "3677": -0.0, + "3678": 0.00841086938191613, + "3679": 1.270395581903329, + "3680": -0.0, + "3681": -0.0, + "3682": 0.18733021197298685, + "3683": -0.0, + "3684": -0.0, + "3685": 1.2139056624508116, + "3686": 0.047667280377380425, + "3687": -0.0, + "3688": 0.44242984207032826, + "3689": 0.019966501192201943, + "3690": -0.0, + "3691": 1.1628232414633473, + "3692": -0.0, + "3693": -0.0, + "3694": 0.3655151668694424, + "3695": -0.0, + "3696": 0.004558632008431808, + "3697": 0.5113320410391945, + "3698": 0.009117084071181667, + "3699": 0.009117084071181667, + "3700": 1.3854728084144512, + "3701": 0.004558632008431808, + "3702": 0.009117084071181667, + "3703": 0.744361619655008, + "3704": 0.004558632008431808, + "3705": 0.004558632008431808, + "3706": 1.1819152455198714, + "3707": 1.2058102609650656, + "3708": 0.8082251683497227, + "3709": 1.1802917935407105, + "3710": -0.0, + "3711": 0.00841086938191613, + "3712": 1.289622968852919, + "3713": 0.004558632008431808, + "3714": -0.0, + "3715": 1.7040548398150215, + "3716": -0.0, + "3717": -0.0, + "3718": 0.9999910058744061, + "3719": -0.0, + "3720": -0.0, + "3721": 1.7061406389847056, + "3722": 0.5485004558178874, + "3723": 0.6818043181498591, + "3724": 1.6914211451452157, + "3725": 0.10919224503612769, + "3726": -0.0, + "3727": 0.6639986827777519, + "3728": -0.0, + "3729": 0.004558632008431808, + "3730": 0.9697399640790215, + "3731": 0.004558632008431808, + "3732": -0.0, + "3733": 1.3260071857461289, + "3734": 0.5056070681421354, + "3735": 0.48547180421714115, + "3736": 1.0494515329480192, + "3737": 0.06467154154794773, + "3738": 0.027411216660965437, + "3739": 1.348172208516473, + "3740": 0.8622518587568766, + "3741": 0.9454267946958486, + "3742": 0.9596940713446682, + "3743": 0.5588584142205346, + "3744": 0.5277755786969344, + "3745": 1.5354205917857766, + "3746": -0.0, + "3747": -0.0, + "3748": 1.705960727849638, + "3749": 0.004558632008431808, + "3750": -0.0, + "3751": 1.3556933629798482, + "3752": 0.004558632008431808, + "3753": -0.0, + "3754": 0.5947936590297476, + "3755": -0.0, + "3756": -0.0, + "3757": 0.41381685030363374, + "3758": -0.0, + "3759": 0.00841086938191613, + "3760": 1.892343952135652, + "3761": -0.0, + "3762": -0.0, + "3763": 1.2148095877829876, + "3764": 0.004558632008431808, + "3765": -0.0, + "3766": 1.0595185202114505, + "3767": -0.0, + "3768": 0.004558632008431808, + "3769": 1.2733693001588038, + "3770": 0.9705012056796195, + "3771": -0.0, + "3772": 1.0555839358319294, + "3773": 0.029524930530661197, + "3774": 0.02187247612535633, + "3775": 1.0421859004495808, + "3776": 0.04491405473097518, + "3777": 0.047907716110818885, + "3778": 1.2158284546563405, + "3779": 0.004558632008431808, + "3780": -0.0, + "3781": 1.4069965682862107, + "3782": 0.7671714152472651, + "3783": 0.8622543928479082, + "3784": 1.3771306901738014, + "3785": 0.018691910629194595, + "3786": -0.0, + "3787": 1.8271531144977482, + "3788": 0.004558632008431808, + "3789": -0.0, + "3790": 1.4004809108773384, + "3791": 0.00841086938191613, + "3792": 0.428174636390755, + "3793": 0.9289061274768864, + "3794": 0.885466126225508, + "3795": -0.0, + "3796": 1.7063222943420011, + "3797": 0.004558632008431808, + "3798": 0.004558632008431808, + "3799": 0.5893207922467447, + "3800": 0.05031761290692778, + "3801": 0.012965103199326016, + "3802": 1.2357250743996742, + "3803": -0.0, + "3804": -0.0, + "3805": 0.9981613120078505, + "3806": -0.0, + "3807": 0.004558632008431808, + "3808": 1.1215267681215637, + "3809": -0.0, + "3810": 0.00841086938191613, + "3811": 0.8535385186202141, + "3812": 0.015408589348188083, + "3813": 0.011996370424748048, + "3814": 0.994189557287513, + "3815": 0.00841086938191613, + "3816": -0.0, + "3817": -0.0, + "3818": 0.5036113409678216, + "3819": 0.004558632008431808, + "3820": 1.4336064483679603, + "3821": 0.012969141435398991, + "3822": -0.0, + "3823": 1.33557111734634, + "3824": -0.0, + "3825": -0.0, + "3826": 1.6789236362737032, + "3827": 0.502794476198325, + "3828": 0.9063330108813593, + "3829": 1.282332776929806, + "3830": 1.0097115054884165, + "3831": 0.5922061385773439, + "3832": 1.55395540554623, + "3833": 0.8590175508087194, + "3834": 0.004558632008431808, + "3835": 1.6096997283282948, + "3836": 0.40891171129390114, + "3837": -0.0, + "3838": 1.4998526829115364, + "3839": -0.0, + "3840": -0.0, + "3841": 0.8663335867700364, + "3842": -0.0, + "3843": 0.004558632008431808, + "3844": 1.3035086966919058, + "3845": 0.00841086938191613, + "3846": -0.0, + "3847": 1.5223524593916196, + "3848": 0.00841086938191613, + "3849": 0.00841086938191613, + "3850": 1.5723731608546676, + "3851": -0.0, + "3852": 0.004558632008431808, + "3853": 0.7034829790144793, + "3854": -0.0, + "3855": 0.00841086938191613, + "3856": 0.9327365867577577, + "3857": 0.004558632008431808, + "3858": -0.0, + "3859": 1.133099279296704, + "3860": 0.00841086938191613, + "3861": -0.0, + "3862": 1.0956293344132018, + "3863": -0.0, + "3864": 0.004558632008431808, + "3865": 0.7087418559335972, + "3866": 0.24828273133324852, + "3867": -0.0, + "3868": 1.764421172478941, + "3869": -0.0, + "3870": -0.0, + "3871": 1.029643150240157, + "3872": 0.004558632008431808, + "3873": -0.0, + "3874": 1.2061556033354786, + "3875": 0.762712560164973, + "3876": 0.8886721908862603, + "3877": 1.5984816890117073, + "3878": -0.0, + "3879": -0.0, + "3880": 0.7690668005190373, + "3881": 0.004558632008431808, + "3882": 0.04498278005850512, + "3883": 1.6986728682734982, + "3884": 0.9042892760475484, + "3885": -0.0, + "3886": 1.4912372307978714, + "3887": 0.06312324836495435, + "3888": -0.0, + "3889": 1.6908823995875712, + "3890": 0.5088822762201008, + "3891": 0.16293538352586825, + "3892": 0.915726674748454, + "3893": 0.5254506799086206, + "3894": 0.6082474442404076, + "3895": 0.9229218878936845, + "3896": 0.009117084071181667, + "3897": -0.0, + "3898": 1.546137193637091, + "3899": -0.0, + "3900": 0.004558632008431808, + "3901": 1.5527211431851369, + "3902": -0.0, + "3903": -0.0, + "3904": 1.8489260889662136, + "3905": 0.999998560942417, + "3906": 0.004558632008431808, + "3907": 0.6375779640251908, + "3908": -0.0, + "3909": 0.018691910629194595, + "3910": 0.9976471812519422, + "3911": -0.0, + "3912": -0.0, + "3913": 0.8596580086064447, + "3914": 0.047667280377380425, + "3915": -0.0, + "3916": 1.687766727624174, + "3917": 0.012969141435398991, + "3918": -0.0, + "3919": -0.0, + "3920": 0.1401697950009077, + "3921": 0.00841086938191613, + "3922": 0.9901303950200337, + "3923": 0.00841086938191613, + "3924": 0.004558632008431808, + "3925": 1.0339954568201626, + "3926": -0.0, + "3927": -0.0, + "3928": 0.7677835490289765, + "3929": 0.9606080203062004, + "3930": -0.0, + "3931": 1.1874178629007235, + "3932": -0.0, + "3933": 0.2385886508579842, + "3934": 1.008342692149784, + "3935": 0.016821018726719157, + "3936": -0.0, + "3937": 1.103807693915383, + "3938": -0.0, + "3939": -0.0, + "3940": 0.8681366813389344, + "3941": 0.018691910629194595, + "3942": 0.015408589348188083, + "3943": 1.232877203499849, + "3944": -0.0, + "3945": 0.156486662659969, + "3946": 1.1394087300901634, + "3947": 0.015408589348188083, + "3948": -0.0, + "3949": 0.799974834293701, + "3950": 0.2253939921596214, + "3951": -0.0, + "3952": 1.091073521602008, + "3953": -0.0, + "3954": -0.0, + "3955": 1.504053926641852, + "3956": -0.0, + "3957": 0.1603407649616188, + "3958": 0.9974314816369851, + "3959": 0.03550430068947326, + "3960": 0.058182259794557434, + "3961": 1.1182663542668363, + "3962": -0.0, + "3963": -0.0, + "3964": 0.9163196502705817, + "3965": 0.08608820829751221, + "3966": 1.0041730442250438, + "3967": 1.243971385131622, + "3968": -0.0, + "3969": -0.0, + "3970": 0.8195192524733316, + "3971": 0.5639210878056362, + "3972": 1.2848845106253377, + "3973": 0.9235691044722798, + "3974": 0.1736752396898644, + "3975": 0.011996370424748048, + "3976": 1.6606626919166696, + "3977": 0.690093809197562, + "3978": -0.0, + "3979": 1.1530325214076416, + "3980": 0.004558632008431808, + "3981": 0.015408589348188083, + "3982": 0.6666388540183427, + "3983": 0.41600361658145835, + "3984": 0.4982949135071556, + "3985": 1.3068951258028836, + "3986": 0.004558632008431808, + "3987": -0.0, + "3988": 0.8231577674764526, + "3989": 0.004558632008431808, + "3990": 0.011996370424748048, + "3991": 0.9235016172088407, + "3992": 0.9042117927591723, + "3993": 0.10579176091930775, + "3994": 1.0220438593092422, + "3995": -0.0, + "3996": -0.0, + "3997": 1.1192006256969738, + "3998": 0.5244282495556789, + "3999": -0.0, + "4000": 1.2607893074766616, + "4001": 0.31731131758963427, + "4002": 0.14456525775457948, + "4003": 0.9196415640367925, + "4004": 0.011996370424748048, + "4005": 0.024967559478864067, + "4006": 0.35219350881577327, + "4007": 0.023818018146658217, + "4008": 0.024967559478864067, + "4009": 1.2606532140030828, + "4010": 0.26658369307258756, + "4011": 0.00841086938191613, + "4012": 1.6414494545047573, + "4013": -0.0, + "4014": 0.011996370424748048, + "4015": 0.9682369334970692, + "4016": 0.012965103199326016, + "4017": -0.0, + "4018": 0.4150372251146736, + "4019": 0.0656057612184809, + "4020": 0.11973170755550042, + "4021": 1.229799723058374, + "4022": 0.8681533193553178, + "4023": -0.0, + "4024": 1.3028231625099707, + "4025": 0.011996370424748048, + "4026": 0.02040615956008207, + "4027": 1.0098760715516484, + "4028": 0.00841086938191613, + "4029": -0.0, + "4030": 1.411166790476469, + "4031": 0.5349511977671604, + "4032": -0.0, + "4033": 1.538669042867156, + "4034": 1.3170489776980117, + "4035": 0.02881522789420296, + "4036": 0.954434002924965, + "4037": 0.505519225496546, + "4038": 0.6080766856402688, + "4039": 1.005159127253852, + "4040": -0.0, + "4041": -0.0, + "4042": -0.0, + "4043": 0.9543937241399041, + "4044": 0.011996370424748048, + "4045": 1.5049588343757951, + "4046": 0.00841086938191613, + "4047": 0.9998258670843068, + "4048": 0.9088401601182627, + "4049": 0.6262684069535843, + "4050": 0.05090567691437575, + "4051": 1.4330874046882762, + "4052": -0.0, + "4053": 0.012969141435398991, + "4054": 0.9084654469642628, + "4055": 0.004558632008431808, + "4056": -0.0, + "4057": 1.6403348442008727, + "4058": -0.0, + "4059": -0.0, + "4060": 0.9805484689733152, + "4061": 0.042504521807455745, + "4062": 0.03068557900446167, + "4063": 1.862266542371609, + "4064": -0.0, + "4065": -0.0, + "4066": 1.2576314443418217, + "4067": 0.13416177700735799, + "4068": -0.0, + "4069": 1.31879332323934, + "4070": 0.004557202708826157, + "4071": -0.0, + "4072": 0.43520335908227065, + "4073": -0.0, + "4074": 0.015408589348188083, + "4075": 1.0160207462752937, + "4076": 0.029524930530661197, + "4077": 0.015408589348188083, + "4078": 0.7419308834012854, + "4079": 0.011996370424748048, + "4080": -0.0, + "4081": 1.2220178969933713, + "4082": -0.0, + "4083": -0.0, + "4084": 0.9988365523617596, + "4085": 0.00841086938191613, + "4086": -0.0, + "4087": 0.9667136043363915, + "4088": -0.0, + "4089": 0.004558632008431808, + "4090": 1.8068860326959082, + "4091": 1.034901799421047, + "4092": 0.5509815286599518, + "4093": 1.0057852640132952, + "4094": -0.0, + "4095": -0.0, + "4096": 1.4508422758569952, + "4097": 0.2353195043340774, + "4098": -0.0, + "4099": 0.8757419236197033, + "4100": -0.0, + "4101": 0.00841086938191613, + "4102": 0.6924625120347147, + "4103": 1.0422061998352268, + "4104": 0.36792296423847404, + "4105": 1.4087546740526713, + "4106": 0.5601820359177964, + "4107": 0.37085888662664834, + "4108": 0.9376963457718865, + "4109": -0.0, + "4110": -0.0, + "4111": 0.98114688800341, + "4112": 0.00841086938191613, + "4113": -0.0, + "4114": 0.9972121892949033, + "4115": -0.0, + "4116": 0.009117084071181667, + "4117": 1.4027305570671018, + "4118": 0.7320620970260412, + "4119": 1.4633241297843786, + "4120": 0.8884110964056523, + "4121": -0.0, + "4122": -0.0, + "4123": -0.0, + "4124": -0.0, + "4125": 0.3964800906786409, + "4126": 0.9368126035944069, + "4127": -0.0, + "4128": -0.0, + "4129": 1.1969803857947918, + "4130": 0.02187247612535633, + "4131": 0.02710097896331548, + "4132": 1.0286842273811576, + "4133": 0.8714925941307247, + "4134": 0.011996370424748048, + "4135": 0.6564912912638833, + "4136": 0.00841086938191613, + "4137": -0.0, + "4138": 0.4186843105268563, + "4139": 0.012969141435398991, + "4140": 0.0774712906755804, + "4141": 1.2893258438990536, + "4142": 0.024967559478864067, + "4143": 0.00841086938191613, + "4144": 1.681404717045307, + "4145": 0.634245146166375, + "4146": 0.7062763190906716, + "4147": 1.4304723291683443, + "4148": 0.9769560121665137, + "4149": -0.0, + "4150": 0.9741823688903825, + "4151": -0.0, + "4152": -0.0, + "4153": 0.9268933342583836, + "4154": 0.011996370424748048, + "4155": -0.0, + "4156": 0.8583406062857537, + "4157": -0.0, + "4158": 0.004558632008431808, + "4159": 0.99897074674189, + "4160": 0.019966501192201943, + "4161": 0.00841086938191613, + "4162": 1.577507934564971, + "4163": -0.0, + "4164": -0.0, + "4165": 1.2937490330690182, + "4166": -0.0, + "4167": 0.047667280377380425, + "4168": 0.994189557287513, + "4169": 0.004558632008431808, + "4170": -0.0, + "4171": 1.377251571827098, + "4172": -0.0, + "4173": -0.0, + "4174": 0.6212488292306582, + "4175": 0.30616632200959737, + "4176": 0.004558632008431808, + "4177": 1.5883190987513482, + "4178": 0.016554462405333748, + "4179": -0.0, + "4180": 0.011996370424748048, + "4181": -0.0, + "4182": 0.782076186973125, + "4183": 0.4039683027691288, + "4184": -0.0, + "4185": 0.00841086938191613, + "4186": 1.000989213198165, + "4187": 0.5597140051448323, + "4188": -0.0, + "4189": 0.9352606981884335, + "4190": 0.00841086938191613, + "4191": 0.4886086402889254, + "4192": 1.5426776545996275, + "4193": 0.00841086938191613, + "4194": -0.0, + "4195": 0.9564912912212484, + "4196": 0.9997266268216567, + "4197": 0.13817662574867837, + "4198": 0.5761206412592439, + "4199": 0.4698904135828622, + "4200": 0.019966501192201943, + "4201": 0.05418719331760294, + "4202": 0.7822618051327648, + "4203": 0.7764639092446906, + "4204": 1.8871017026881316, + "4205": 0.004558632008431808, + "4206": -0.0, + "4207": 0.7676750515182581, + "4208": 0.07050175960541472, + "4209": -0.0, + "4210": 1.6629369833424663, + "4211": -0.0, + "4212": 0.015408589348188083, + "4213": 0.6500224216483541, + "4214": -0.0, + "4215": -0.0, + "4216": 1.026677332864376, + "4217": -0.0, + "4218": 0.9938172480187135, + "4219": 1.4212134675390586, + "4220": 0.00841086938191613, + "4221": -0.0, + "4222": 1.478180287613044, + "4223": 0.03669798673310072, + "4224": 0.004558632008431808, + "4225": 1.2623880652246884, + "4226": -0.0, + "4227": -0.0, + "4228": 0.9523275944597788, + "4229": -0.0, + "4230": -0.0, + "4231": 0.8980360816176309, + "4232": -0.0, + "4233": -0.0, + "4234": 0.8461673486269379, + "4235": 0.999976974963836, + "4236": -0.0, + "4237": 1.5678750521364075, + "4238": -0.0, + "4239": -0.0, + "4240": 1.6677114886099058, + "4241": -0.0, + "4242": 0.018691910629194595, + "4243": 0.9992555956771518, + "4244": 0.004558632008431808, + "4245": -0.0, + "4246": 0.7330365365498329, + "4247": 0.13817662574867837, + "4248": 0.13817662574867837, + "4249": 1.4242411222761726, + "4250": -0.0, + "4251": -0.0, + "4252": 0.730737646368242, + "4253": 0.713320641612308, + "4254": -0.0, + "4255": 1.2705585727582436, + "4256": 0.004558632008431808, + "4257": -0.0, + "4258": 0.4886086402889254, + "4259": 0.5335685614874958, + "4260": 0.5942746384617416, + "4261": 1.825801731058263, + "4262": 0.1785441967689101, + "4263": 0.4355543643082254, + "4264": 0.7122207348674127, + "4265": 0.5791486267097731, + "4266": -0.0, + "4267": 0.7606127059852072, + "4268": -0.0, + "4269": 0.02187247612535633, + "4270": 0.3303535908166454, + "4271": -0.0, + "4272": 0.004558632008431808, + "4273": 0.6308178185010092, + "4274": 0.1361740102464381, + "4275": -0.0, + "4276": 1.0555631299198893, + "4277": 0.24667862807611549, + "4278": -0.0, + "4279": 1.6329883320608305, + "4280": 0.35497054359394425, + "4281": -0.0, + "4282": 1.6591249424583894, + "4283": -0.0, + "4284": -0.0, + "4285": -0.0, + "4286": -0.0, + "4287": -0.0, + "4288": 1.4639455060362037, + "4289": 0.004558632008431808, + "4290": -0.0, + "4291": 1.5737502994780317, + "4292": -0.0, + "4293": -0.0, + "4294": 0.9903020301672159, + "4295": 1.0033754569351947, + "4296": -0.0, + "4297": 1.5736742653318982, + "4298": 0.9291831036076618, + "4299": 0.5598308497366487, + "4300": 1.8093302681570325, + "4301": -0.0, + "4302": -0.0, + "4303": 0.9628248291445171, + "4304": -0.0, + "4305": 0.004558632008431808, + "4306": -0.0, + "4307": 0.377362336017113, + "4308": -0.0, + "4309": 1.3515391977814986, + "4310": 0.5120232605746106, + "4311": -0.0, + "4312": 0.783618551515159, + "4313": -0.0, + "4314": 0.004557202708826157, + "4315": 0.9916719691266045, + "4316": -0.0, + "4317": 0.004558632008431808, + "4318": 1.3476534873473018, + "4319": 0.9840757185697568, + "4320": -0.0, + "4321": 1.0823570515481966, + "4322": 0.7665375511422436, + "4323": -0.0, + "4324": 1.5579790023893536, + "4325": -0.0, + "4326": -0.0, + "4327": 0.9726191634153889, + "4328": -0.0, + "4329": -0.0, + "4330": 1.487446173337139, + "4331": -0.0, + "4332": -0.0, + "4333": 1.6399259044790038, + "4334": 0.29886556797770736, + "4335": -0.0, + "4336": 1.812454075642313, + "4337": 0.0540948131509933, + "4338": 0.02187247612535633, + "4339": 0.04820962931503875, + "4340": 0.004558632008431808, + "4341": -0.0, + "4342": 1.1055403715291454, + "4343": 0.49615546156958523, + "4344": 0.49615546156958523, + "4345": 1.3939221086855318, + "4346": 1.2658390272495952, + "4347": -0.0, + "4348": 1.0766530160156957, + "4349": 0.004558632008431808, + "4350": -0.0, + "4351": 0.9941560580610096, + "4352": 0.08459669160994185, + "4353": 0.0600794150574988, + "4354": 1.0304211915871675, + "4355": 0.7330989380622849, + "4356": 0.4972261128105194, + "4357": 0.7582025720359638, + "4358": -0.0, + "4359": -0.0, + "4360": 0.9175879998534127, + "4361": 0.9853990743973924, + "4362": 0.018691910629194595, + "4363": 1.4821803664327216, + "4364": 1.207810911282701, + "4365": 0.1753110332836063, + "4366": 0.9639614011549301, + "4367": 0.14412845038558464, + "4368": 0.004558632008431808, + "4369": 1.4216511350421035, + "4370": -0.0, + "4371": 0.004558632008431808, + "4372": 1.5661021572961953, + "4373": 1.383237530716869, + "4374": 0.4972261128105194, + "4375": 1.2707798955790433, + "4376": 0.7652178055967153, + "4377": -0.0, + "4378": 0.7396216054823364, + "4379": -0.0, + "4380": -0.0, + "4381": 0.8238324877227704, + "4382": -0.0, + "4383": -0.0, + "4384": 1.5144406850437226, + "4385": 0.004558632008431808, + "4386": -0.0, + "4387": 0.03384824280250546, + "4388": 0.004558632008431808, + "4389": 0.011996370424748048, + "4390": 0.9789297713034499, + "4391": 0.0606162867179846, + "4392": 0.012969141435398991, + "4393": 0.046817968113933184, + "4394": 0.004558632008431808, + "4395": -0.0, + "4396": 0.08928947906233338, + "4397": -0.0, + "4398": -0.0, + "4399": 0.9767145538553562, + "4400": -0.0, + "4401": -0.0, + "4402": 0.15961566939799585, + "4403": 0.004558632008431808, + "4404": -0.0, + "4405": 1.1288518590921541, + "4406": 0.004558632008431808, + "4407": -0.0, + "4408": 1.1861029282779252, + "4409": 0.05253113543063514, + "4410": 0.015408589348188083, + "4411": 1.0861349488453154, + "4412": 0.17544073493556567, + "4413": 0.004558632008431808, + "4414": 1.1641485705793637, + "4415": -0.0, + "4416": -0.0, + "4417": 0.9235016172088407, + "4418": -0.0, + "4419": 0.03669798673310072, + "4420": 0.6708663298751407, + "4421": -0.0, + "4422": 0.6117809280741673, + "4423": 0.994205958267437, + "4424": -0.0, + "4425": -0.0, + "4426": 0.9917261793546341, + "4427": 0.06517130768014033, + "4428": -0.0, + "4429": 0.6858090824164391, + "4430": 0.011996370424748048, + "4431": 0.5529900214381919, + "4432": 1.0041946379228737, + "4433": 0.011996370424748048, + "4434": 0.0656057612184809, + "4435": 0.9120555757927769, + "4436": 0.05905309139250686, + "4437": 1.383678043965478, + "4438": 1.0376872026780928, + "4439": 0.011996370424748048, + "4440": 0.04924961902740796, + "4441": 0.9839458954879012, + "4442": -0.0, + "4443": -0.0, + "4444": 0.7292096539389452, + "4445": 0.004558632008431808, + "4446": 0.015408589348188083, + "4447": 0.09833794738427883, + "4448": -0.0, + "4449": -0.0, + "4450": 0.12391481928035482, + "4451": -0.0, + "4452": -0.0, + "4453": 0.947593570346034, + "4454": -0.0, + "4455": 0.00841086938191613, + "4456": 0.9878603898344134, + "4457": -0.0, + "4458": -0.0, + "4459": 0.8179252501386403, + "4460": 0.004558632008431808, + "4461": -0.0, + "4462": -0.0, + "4463": 1.0766356786191589, + "4464": 0.6425906898267837, + "4465": -0.0, + "4466": 1.7310062579219825, + "4467": -0.0, + "4468": -0.0, + "4469": -0.0, + "4470": -0.0, + "4471": -0.0, + "4472": 0.9869732540456722, + "4473": 0.004558632008431808, + "4474": -0.0, + "4475": 0.5905662018406779, + "4476": 0.004558632008431808, + "4477": -0.0, + "4478": 0.7111871543139269, + "4479": -0.0, + "4480": 0.004558632008431808, + "4481": 0.6073605406807436, + "4482": -0.0, + "4483": 0.004557202708826157, + "4484": 0.9422367666706396, + "4485": 0.4002352648820691, + "4486": -0.0, + "4487": 0.9829921190992749, + "4488": 0.6677244788717847, + "4489": 1.3021824750973938, + "4490": 1.5844935091976062, + "4491": 0.5355810898927487, + "4492": 0.004558632008431808, + "4493": 1.4855189182924455, + "4494": 0.7814668575113941, + "4495": -0.0, + "4496": 1.4654014874082204, + "4497": 0.5071095439677443, + "4498": 0.5288565301585019, + "4499": 1.132673453536848, + "4500": 0.17044097857479223, + "4501": 0.0555240318366822, + "4502": 1.6212982263881097, + "4503": -0.0, + "4504": -0.0, + "4505": 1.5749642538236523, + "4506": 1.3215245393201789, + "4507": -0.0, + "4508": 1.4151012625823787, + "4509": -0.0, + "4510": 0.004558632008431808, + "4511": 0.48203093709940914, + "4512": 0.5025517151011984, + "4513": -0.0, + "4514": 1.166840282609448, + "4515": 0.009117084071181667, + "4516": -0.0, + "4517": 0.004558632008431808, + "4518": 0.004558632008431808, + "4519": -0.0, + "4520": -0.0, + "4521": 1.6353049264369892, + "4522": 0.44364217129695593, + "4523": 0.9817095062121773, + "4524": 0.9375031955968612, + "4525": 0.027989437753261202, + "4526": 0.02187247612535633, + "4527": 0.6524762729045575, + "4528": -0.0, + "4529": -0.0, + "4530": 1.3195154747477478, + "4531": 1.5068792553801076, + "4532": -0.0, + "4533": 0.9392059345130155, + "4534": -0.0, + "4535": -0.0, + "4536": 0.6091329320137322, + "4537": -0.0, + "4538": -0.0, + "4539": 0.6872702078539301, + "4540": 0.5964634684335328, + "4541": 0.004558632008431808, + "4542": 1.9102196975801222, + "4543": 0.9775032108541035, + "4544": -0.0, + "4545": -0.0, + "4546": 0.2525318532950483, + "4547": 0.04963108635136841, + "4548": 0.00841086938191613, + "4549": 1.6277993341086754, + "4550": -0.0, + "4551": -0.0, + "4552": 0.9996081812309057, + "4553": 0.9992051347240035, + "4554": 0.4100965333228151, + "4555": 0.9368421450446289, + "4556": 0.03384824280250546, + "4557": -0.0, + "4558": 1.655644826714773, + "4559": 0.07531202940181617, + "4560": 0.004558632008431808, + "4561": 1.2239623653341163, + "4562": -0.0, + "4563": 0.02040615956008207, + "4564": 1.003655694593845, + "4565": -0.0, + "4566": -0.0, + "4567": 0.9042892760475484, + "4568": 0.052935904632775976, + "4569": -0.0, + "4570": 1.7899231835567881, + "4571": 0.5817852894696557, + "4572": -0.0, + "4573": 1.5871840704698033, + "4574": 0.9311332810315052, + "4575": -0.0, + "4576": 1.6654354216765572, + "4577": -0.0, + "4578": -0.0, + "4579": 1.1841214036674068, + "4580": -0.0, + "4581": -0.0, + "4582": 0.9796969788000403, + "4583": 0.545951062976069, + "4584": 0.5184311897573607, + "4585": 1.0441035489685149, + "4586": 1.3067627183673307, + "4587": -0.0, + "4588": 1.3983033550304493, + "4589": 0.00841086938191613, + "4590": 0.00841086938191613, + "4591": 0.7737537770003606, + "4592": 0.008408260191310772, + "4593": 0.00841086938191613, + "4594": 1.5024346944849722, + "4595": -0.0, + "4596": -0.0, + "4597": 1.5644686609937466, + "4598": -0.0, + "4599": -0.0, + "4600": 0.8135091066920138, + "4601": -0.0, + "4602": -0.0, + "4603": 0.992937086819407, + "4604": 1.028191394075976, + "4605": 1.4039504165836154, + "4606": 0.8993954802325737, + "4607": 0.08928947906233338, + "4608": -0.0, + "4609": 1.4287829938959098, + "4610": 1.0755359506482236, + "4611": 0.03950117460432034, + "4612": 0.6875373736996551, + "4613": 0.49615546156958523, + "4614": -0.0, + "4615": 1.264089626079191, + "4616": 0.5079757698419763, + "4617": 0.762103808958637, + "4618": 1.3603171871281508, + "4619": -0.0, + "4620": -0.0, + "4621": 0.9080899122555532, + "4622": 0.009114225599005796, + "4623": 0.004557202708826157, + "4624": 1.7722451290814714, + "4625": 0.37085888662664834, + "4626": -0.0, + "4627": 1.8203351592523564, + "4628": -0.0, + "4629": -0.0, + "4630": 1.3250924801796322, + "4631": -0.0, + "4632": 0.009114225599005796, + "4633": 0.9397202941149768, + "4634": -0.0, + "4635": -0.0, + "4636": 1.6273519650306916, + "4637": -0.0, + "4638": -0.0, + "4639": 1.3915470892669484, + "4640": -0.0, + "4641": -0.0, + "4642": 1.7189626564860625, + "4643": -0.0, + "4644": -0.0, + "4645": 0.6634996404370499, + "4646": -0.0, + "4647": -0.0, + "4648": 1.4196672833456658, + "4649": 0.004558632008431808, + "4650": -0.0, + "4651": 1.529268933587137, + "4652": -0.0, + "4653": 0.004558632008431808, + "4654": 0.7659026505934574, + "4655": -0.0, + "4656": -0.0, + "4657": -0.0, + "4658": -0.0, + "4659": -0.0, + "4660": 0.9745859711648497, + "4661": -0.0, + "4662": -0.0, + "4663": 1.0263479499578636, + "4664": 0.02399112019315294, + "4665": -0.0, + "4666": 1.1603757188645514, + "4667": 0.339229827139658, + "4668": 0.00841086938191613, + "4669": 1.3020620689499822, + "4670": -0.0, + "4671": -0.0, + "4672": 0.38123244816515633, + "4673": -0.0, + "4674": -0.0, + "4675": -0.0, + "4676": 0.9790881975956915, + "4677": -0.0, + "4678": 1.8722074120038663, + "4679": 0.22396838719918916, + "4680": 0.004558632008431808, + "4681": 1.383403751024033, + "4682": 0.004558632008431808, + "4683": -0.0, + "4684": 1.1866397343959085, + "4685": 0.6629763525206961, + "4686": -0.0, + "4687": 1.6503190213395516, + "4688": 0.49850895651187693, + "4689": -0.0, + "4690": 0.319049395221722, + "4691": -0.0, + "4692": 0.03669798673310072, + "4693": 1.6212664176125742, + "4694": 1.2744607860980002, + "4695": -0.0, + "4696": 1.47041584222907, + "4697": 0.49185424518237375, + "4698": -0.0, + "4699": 1.2485136680831947, + "4700": -0.0, + "4701": -0.0, + "4702": 0.3778859337320769, + "4703": 0.10941803097530797, + "4704": 0.027989437753261202, + "4705": 1.5098327524437372, + "4706": 0.5549526118442237, + "4707": 0.00841086938191613, + "4708": 1.4881194655689602, + "4709": 0.9903020301672159, + "4710": 0.7423457903821425, + "4711": 1.687693363373824, + "4712": 0.9046349189444316, + "4713": 0.00841086938191613, + "4714": 1.1766294229575782, + "4715": 0.40644482844567054, + "4716": 0.39773429172601993, + "4717": 1.2984572234284941, + "4718": -0.0, + "4719": 0.00841086938191613, + "4720": 1.0010499166286086, + "4721": -0.0, + "4722": 0.004558632008431808, + "4723": 0.9207777106684613, + "4724": 0.565552215240584, + "4725": 0.4831613492850786, + "4726": 1.1047748076704305, + "4727": 0.7244631940785224, + "4728": 0.004558632008431808, + "4729": 1.550635664349017, + "4730": -0.0, + "4731": -0.0, + "4732": 0.9147242150989261, + "4733": 0.15755582868423212, + "4734": 0.004558632008431808, + "4735": 1.6797457581083393, + "4736": 0.4958197339846939, + "4737": 0.009117084071181667, + "4738": 0.9937223565884408, + "4739": -0.0, + "4740": -0.0, + "4741": 1.0086688456365858, + "4742": 1.376596349361683, + "4743": 0.5626403208478302, + "4744": 1.6095326438172006, + "4745": -0.0, + "4746": 0.39974063330018644, + "4747": 0.4743454375622397, + "4748": -0.0, + "4749": -0.0, + "4750": 1.576521776961723, + "4751": -0.0, + "4752": -0.0, + "4753": 0.9935303961226494, + "4754": -0.0, + "4755": -0.0, + "4756": 0.8933607340218579, + "4757": -0.0, + "4758": 0.004558632008431808, + "4759": 0.5768367569516, + "4760": -0.0, + "4761": -0.0, + "4762": 0.35898051130518605, + "4763": -0.0, + "4764": -0.0, + "4765": 0.7759373305779853, + "4766": -0.0, + "4767": -0.0, + "4768": 0.9842275743815578, + "4769": 0.00841086938191613, + "4770": 0.004558632008431808, + "4771": 0.8859824587825101, + "4772": 0.004558632008431808, + "4773": -0.0, + "4774": 1.923547082526321, + "4775": -0.0, + "4776": -0.0, + "4777": 0.8264372750041076, + "4778": -0.0, + "4779": -0.0, + "4780": 1.344618594841679, + "4781": -0.0, + "4782": -0.0, + "4783": 0.693826064836885, + "4784": 0.024967559478864067, + "4785": -0.0, + "4786": 0.8664854981596064, + "4787": 0.02399112019315294, + "4788": 0.042938793775757336, + "4789": 1.1954053044325255, + "4790": 0.6665742073333419, + "4791": -0.0, + "4792": 1.203173153318137, + "4793": 0.02187247612535633, + "4794": 0.004558632008431808, + "4795": 0.4703230781193677, + "4796": 0.03998148260275001, + "4797": -0.0, + "4798": 1.3120743630361256, + "4799": 0.6309678219125441, + "4800": 0.6035827966950196, + "4801": 0.9968792188108043, + "4802": 0.6731850482335191, + "4803": 0.2502080575667468, + "4804": 0.9128247149619108, + "4805": 0.870732640904313, + "4806": -0.0, + "4807": 0.8942158996080863, + "4808": 0.004558632008431808, + "4809": -0.0, + "4810": 1.2164551983883711, + "4811": 0.9356662905054589, + "4812": 0.7890805562895737, + "4813": 1.396433252211863, + "4814": 0.004558632008431808, + "4815": 0.004558632008431808, + "4816": 0.9998701211988178, + "4817": 0.839614244058676, + "4818": -0.0, + "4819": 1.6096315915457406, + "4820": -0.0, + "4821": 0.882391411449816, + "4822": 0.8107179827227745, + "4823": 0.012969141435398991, + "4824": 0.011996370424748048, + "4825": 1.0083289840576177, + "4826": -0.0, + "4827": 0.004558632008431808, + "4828": 0.9940048537541567, + "4829": -0.0, + "4830": -0.0, + "4831": 1.5128692982121934, + "4832": 0.9304864024768968, + "4833": 0.004558632008431808, + "4834": 1.3263222690863476, + "4835": 0.49615546156958523, + "4836": 0.6289458999225251, + "4837": 0.993194470842936, + "4838": -0.0, + "4839": -0.0, + "4840": 0.9789070788694685, + "4841": -0.0, + "4842": -0.0, + "4843": 0.8220296685996187, + "4844": 0.15579377956800672, + "4845": 0.004558632008431808, + "4846": 1.255206457486542, + "4847": -0.0, + "4848": -0.0, + "4849": 1.5534364588600786, + "4850": -0.0, + "4851": 0.004558632008431808, + "4852": 0.6773852796697697, + "4853": 0.004558632008431808, + "4854": -0.0, + "4855": 0.6732632618237508, + "4856": 0.004558632008431808, + "4857": 0.004558632008431808, + "4858": 1.1220077592275315, + "4859": 0.004558632008431808, + "4860": 0.004558632008431808, + "4861": 0.9710330980954721, + "4862": -0.0, + "4863": -0.0, + "4864": 1.3134400538185493, + "4865": 0.004558632008431808, + "4866": -0.0, + "4867": 1.2784052064223166, + "4868": 0.5706900856267858, + "4869": -0.0, + "4870": 1.7256368805589044, + "4871": 0.9008069255018502, + "4872": 0.15387067963154086, + "4873": 1.589809085627421, + "4874": 0.08371349837485635, + "4875": 0.004558632008431808, + "4876": 1.3236288250500845, + "4877": 1.010785365257447, + "4878": 1.017171242784204, + "4879": 0.40654139180697263, + "4880": 0.043653160861316744, + "4881": 0.029515949071036822, + "4882": 0.7232164252337135, + "4883": 0.17459589536827275, + "4884": 0.1134675757460791, + "4885": 0.9325708886053415, + "4886": 0.9994527293321107, + "4887": -0.0, + "4888": 1.2609833376867168, + "4889": 1.0292338792414053, + "4890": 0.4864354442203568, + "4891": 1.0289761891323408, + "4892": 0.004558632008431808, + "4893": 0.004558632008431808, + "4894": 1.7443271351516998, + "4895": 0.8601513726192048, + "4896": -0.0, + "4897": 1.3948702940349675, + "4898": -0.0, + "4899": -0.0, + "4900": 1.689928746266324, + "4901": -0.0, + "4902": -0.0, + "4903": 0.19090909589129434, + "4904": 0.36560731672444463, + "4905": -0.0, + "4906": 1.4386815005057614, + "4907": 0.24506994559439965, + "4908": 0.00841086938191613, + "4909": 1.5172652334296328, + "4910": 0.4125941206654131, + "4911": -0.0, + "4912": 1.0030398881190883, + "4913": 0.629773477675418, + "4914": 0.1485603084654481, + "4915": 1.6785065724870118, + "4916": 0.5046691472114381, + "4917": -0.0, + "4918": 1.1405613415221625, + "4919": 0.7404927312133885, + "4920": 0.18556539091331226, + "4921": 1.289165754637441, + "4922": 0.10048768237990234, + "4923": -0.0, + "4924": 1.486354606422541, + "4925": -0.0, + "4926": -0.0, + "4927": 0.8525673830332361, + "4928": 0.011996370424748048, + "4929": 0.011996370424748048, + "4930": 0.524641158067805, + "4931": 0.009117084071181667, + "4932": 0.0606162867179846, + "4933": 0.8974398015671008, + "4934": -0.0, + "4935": -0.0, + "4936": 1.6419094975949813, + "4937": -0.0, + "4938": 0.018691910629194595, + "4939": 0.018691910629194595, + "4940": -0.0, + "4941": 0.1361740102464381, + "4942": 0.08928947906233338, + "4943": -0.0, + "4944": -0.0, + "4945": 0.6237686227794321, + "4946": 0.015408589348188083, + "4947": 0.05222320650363407, + "4948": 0.6748272248148874, + "4949": 0.9924802601058726, + "4950": -0.0, + "4951": 0.4097148819590427, + "4952": 0.004558632008431808, + "4953": -0.0, + "4954": 1.7904822570656849, + "4955": 0.018691910629194595, + "4956": 0.02187247612535633, + "4957": 0.967607411946908, + "4958": 0.6581146823182624, + "4959": 0.8206956765710399, + "4960": 1.0358543752082654, + "4961": -0.0, + "4962": -0.0, + "4963": 0.5857208050180593, + "4964": 0.004558632008431808, + "4965": -0.0, + "4966": 1.501751475093695, + "4967": 0.8441346160346077, + "4968": 0.018691910629194595, + "4969": 1.3883518630425409, + "4970": 0.004558632008431808, + "4971": 0.004558632008431808, + "4972": 0.6187806333643635, + "4973": -0.0, + "4974": -0.0, + "4975": 0.9807165481708267, + "4976": 0.9668345925733391, + "4977": 0.004558632008431808, + "4978": 0.3784830693253174, + "4979": 0.013675356124664528, + "4980": 0.06312324836495435, + "4981": 0.4777388388544231, + "4982": 0.004558632008431808, + "4983": -0.0, + "4984": -0.0, + "4985": -0.0, + "4986": 0.004558632008431808, + "4987": 1.4839453216160174, + "4988": 0.00841086938191613, + "4989": 0.33805628346315253, + "4990": 0.9417301033144667, + "4991": -0.0, + "4992": -0.0, + "4993": 1.8876528946961215, + "4994": 0.18014557168187664, + "4995": -0.0, + "4996": 1.176207053087691, + "4997": -0.0, + "4998": -0.0, + "4999": 0.8501238445746617, + "5000": -0.0, + "5001": -0.0, + "5002": 0.15961566939799585, + "5003": -0.0, + "5004": 0.4562388607850574, + "5005": 0.7035996105236305, + "5006": 0.5005375299820579, + "5007": -0.0, + "5008": 0.9203999230305608, + "5009": -0.0, + "5010": -0.0, + "5011": 1.2822145326808305, + "5012": 1.000124018418973, + "5013": 1.8276158370109874, + "5014": 0.45649615224043, + "5015": -0.0, + "5016": -0.0, + "5017": 0.9788788277492111, + "5018": 0.7124633990108712, + "5019": 0.4994654015005459, + "5020": 0.8504374269065156, + "5021": 0.00841086938191613, + "5022": 0.027989437753261202, + "5023": 0.00841086938191613, + "5024": 0.4972261128105194, + "5025": 0.004558632008431808, + "5026": 1.363480291179776, + "5027": 0.004558632008431808, + "5028": -0.0, + "5029": 1.2249082064740344, + "5030": 0.004558632008431808, + "5031": 0.004558632008431808, + "5032": 0.865096783583964, + "5033": 0.4263697084130524, + "5034": 0.023249642272916402, + "5035": 1.356948983334268, + "5036": 0.011996370424748048, + "5037": 0.02040615956008207, + "5038": 0.7562539648569861, + "5039": 0.5120232605746106, + "5040": -0.0, + "5041": 0.6650949098267472, + "5042": 0.4993618688976174, + "5043": -0.0, + "5044": 0.5648103609691906, + "5045": 0.44247576742943856, + "5046": 0.5046691472114381, + "5047": 0.5993479053435479, + "5048": -0.0, + "5049": -0.0, + "5050": 0.9658218123376154, + "5051": 0.999919051523874, + "5052": -0.0, + "5053": 1.3698764348904993, + "5054": -0.0, + "5055": 0.004557202708826157, + "5056": -0.0, + "5057": 0.9761057207501357, + "5058": -0.0, + "5059": 1.2091165606922563, + "5060": 0.965596977395107, + "5061": -0.0, + "5062": 1.5519329528536256, + "5063": 0.3315771583254705, + "5064": -0.0, + "5065": 1.559374069176327, + "5066": 0.018691910629194595, + "5067": -0.0, + "5068": 1.8645618542357836, + "5069": -0.0, + "5070": 0.004557202708826157, + "5071": 0.9330548696602006, + "5072": 0.4002352648820691, + "5073": -0.0, + "5074": 1.2197563648481713, + "5075": 0.9798327390447851, + "5076": -0.0, + "5077": 1.512218336123936, + "5078": 0.4113690270900201, + "5079": -0.0, + "5080": 1.794673472371073, + "5081": -0.0, + "5082": 0.004558632008431808, + "5083": 0.8520804709748735, + "5084": -0.0, + "5085": 0.12806555660656896, + "5086": 1.4642807825401092, + "5087": 0.016554462405333748, + "5088": -0.0, + "5089": 1.5667123045329066, + "5090": 1.8597550902994069, + "5091": 0.5586834224962128, + "5092": 1.3413481659237372, + "5093": 0.004558632008431808, + "5094": -0.0, + "5095": 0.9000130628830676, + "5096": -0.0, + "5097": -0.0, + "5098": 0.6091329320137322, + "5099": 0.018691910629194595, + "5100": 0.584505696420533, + "5101": 1.4559467499794163, + "5102": 0.030947290485022937, + "5103": 0.3317471249909454, + "5104": 0.6508416643021266, + "5105": 0.7894961626943646, + "5106": 0.004558632008431808, + "5107": 0.979431790980281, + "5108": 0.00841086938191613, + "5109": 0.004558632008431808, + "5110": 0.8310603006002399, + "5111": -0.0, + "5112": 0.021865835385137186, + "5113": 0.7369225139354292, + "5114": 0.9355283038812265, + "5115": -0.0, + "5116": 1.0982908262553026, + "5117": 0.004558632008431808, + "5118": -0.0, + "5119": 0.6398403541958744, + "5120": 0.011996370424748048, + "5121": -0.0, + "5122": 1.4318359546016446, + "5123": 1.4534629322937367, + "5124": 0.5599882602295921, + "5125": 1.1293792608454005, + "5126": -0.0, + "5127": -0.0, + "5128": 0.9682452182690405, + "5129": 1.274459271546959, + "5130": 0.004558632008431808, + "5131": 1.974343289285435, + "5132": -0.0, + "5133": 0.030947290485022937, + "5134": 0.8592903441490768, + "5135": 0.49185424518237375, + "5136": 0.49850895651187693, + "5137": 1.1071946789381948, + "5138": 0.004558632008431808, + "5139": -0.0, + "5140": 0.48030206542187504, + "5141": -0.0, + "5142": 0.004558632008431808, + "5143": 1.948327993851675, + "5144": 0.4993618688976174, + "5145": 0.004558632008431808, + "5146": 0.004558632008431808, + "5147": -0.0, + "5148": 0.004558632008431808, + "5149": 1.3534207501041642, + "5150": 0.004558632008431808, + "5151": -0.0, + "5152": 0.27335436342314906, + "5153": -0.0, + "5154": -0.0, + "5155": 0.7110589880344984, + "5156": -0.0, + "5157": -0.0, + "5158": 0.4390701477443507, + "5159": -0.0, + "5160": -0.0, + "5161": 0.9313791388894562, + "5162": 0.004560062254223774, + "5163": 0.004558632008431808, + "5164": 0.985123268084045, + "5165": 0.004558632008431808, + "5166": 0.009117084071181667, + "5167": 0.8668451151015134, + "5168": -0.0, + "5169": -0.0, + "5170": 0.8907457013363456, + "5171": 0.8856681273493003, + "5172": -0.0, + "5173": 1.1940962743688768, + "5174": 0.009117084071181667, + "5175": 0.004558632008431808, + "5176": 0.004558632008431808, + "5177": -0.0, + "5178": 0.03068557900446167, + "5179": 0.46083949273517416, + "5180": 0.14072283306754452, + "5181": 0.016554462405333748, + "5182": 0.9547934659372552, + "5183": -0.0, + "5184": -0.0, + "5185": 0.004558632008431808, + "5186": 0.004558632008431808, + "5187": 0.004558632008431808, + "5188": 0.004558632008431808, + "5189": 0.012969141435398991, + "5190": -0.0, + "5191": 0.9285266771426124, + "5192": -0.0, + "5193": -0.0, + "5194": 0.7722051549338407, + "5195": 0.004558632008431808, + "5196": -0.0, + "5197": 1.2244935235529755, + "5198": -0.0, + "5199": 0.004557202708826157, + "5200": 0.9564912912212484, + "5201": 0.8907457013363456, + "5202": 0.004558632008431808, + "5203": 0.9276796011613588, + "5204": 0.008408260191310772, + "5205": 0.02854867157281755, + "5206": 0.030947290485022937, + "5207": 0.004558632008431808, + "5208": 0.018691910629194595, + "5209": 0.7635468007547683, + "5210": -0.0, + "5211": -0.0, + "5212": -0.0, + "5213": 0.015408589348188083, + "5214": 0.015408589348188083, + "5215": 0.015408589348188083, + "5216": -0.0, + "5217": -0.0, + "5218": 0.0843884915557754, + "5219": 0.011996370424748048, + "5220": 0.023249642272916406, + "5221": 0.004558632008431808, + "5222": -0.0, + "5223": 0.004558632008431808, + "5224": 0.004558632008431808, + "5225": -0.0, + "5226": -0.0, + "5227": 0.004558632008431808, + "5228": -0.0, + "5229": -0.0, + "5230": 0.6094135538065302, + "5231": 0.004558632008431808, + "5232": 0.004558632008431808, + "5233": 0.015408589348188083, + "5234": 0.015408589348188083, + "5235": 0.004558632008431808, + "5236": 0.004558632008431808, + "5237": 0.5748473338113215, + "5238": 0.9158042259896257, + "5239": 0.8072802422846022, + "5240": 0.7523421464458533, + "5241": 0.5939968263400164, + "5242": 0.09381385934518276, + "5243": -0.0, + "5244": -0.0, + "5245": 0.00841086938191613, + "5246": -0.0, + "5247": -0.0, + "5248": -0.0, + "5249": -0.0, + "5250": -0.0, + "5251": 0.03998148260275001, + "5252": -0.0, + "5253": -0.0, + "5254": -0.0, + "5255": -0.0, + "5256": 0.004558632008431808, + "5257": 0.004558632008431808, + "5258": 0.004558632008431808, + "5259": 0.004558632008431808, + "5260": -0.0, + "5261": 0.1361357454055645, + "5262": 0.004558632008431808, + "5263": 0.9475077012643109, + "5264": 0.07150543620773343, + "5265": 0.004558632008431808, + "5266": -0.0, + "5267": 0.00841086938191613, + "5268": 0.00841086938191613, + "5269": 0.18912285288949826, + "5270": 0.6236666909359384, + "5271": 1.0181856757081569, + "5272": 1.1168972862391977, + "5273": 0.9996024956563219, + "5274": 0.02187247612535633, + "5275": 0.016554462405333748, + "5276": 0.0433922586469241, + "5277": 0.027402798515671886, + "5278": 0.00841086938191613, + "5279": 0.5239064223034534, + "5280": 0.9879180894849213, + "5281": 0.6328650084071421, + "5282": -0.0, + "5283": -0.0, + "5284": -0.0, + "5285": 0.11693683954989229, + "5286": -0.0, + "5287": 0.9954823995335804, + "5288": 1.0176791945295083, + "5289": 1.028713457008462, + "5290": 0.9954823995335804, + "5291": 1.0330039573165626, + "5292": 0.5254646598522907, + "5293": 0.004558632008431808, + "5294": 1.0688013332066815, + "5295": 0.06404332915335931, + "5296": 0.01868621243689957, + "5297": 0.6268765420731705, + "5298": 0.9531232633413156, + "5299": 0.972216835841168, + "5300": 0.5793322622620551, + "5301": 0.026421958228419837, + "5302": 0.018691910629194595, + "5303": 0.10919224503612769, + "5304": 0.009117084071181667, + "5305": 0.004558632008431808, + "5306": 1.4336107025714844, + "5307": 0.008408260191310772, + "5308": 0.004558632008431808, + "5309": 0.027989437753261202, + "5310": -0.0, + "5311": 0.06493664709039257, + "5312": 0.5675530953577803, + "5313": 0.8466650729816454, + "5314": 1.1385099590168737, + "5315": 0.5847194829971978, + "5316": 0.018691910629194595, + "5317": 0.6104242655545185, + "5318": 0.4390736340204442, + "5319": 0.08669610817393003, + "5320": 0.33774164501296766, + "5321": 0.5115609687285695, + "5322": -0.0, + "5323": -0.0, + "5324": 0.015408589348188083, + "5325": 0.5819408135159463, + "5326": 0.7772179606894756, + "5327": 1.3252739322157836, + "5328": 0.47919532089066, + "5329": -0.0, + "5330": 0.40428494027360473, + "5331": 0.5067793209468459, + "5332": -0.0, + "5333": 1.3226825634859545, + "5334": 0.9926875745657954, + "5335": -0.0, + "5336": 1.423742720795636, + "5337": 0.00841086938191613, + "5338": -0.0, + "5339": 1.0963791804397283, + "5340": 0.004558632008431808, + "5341": 0.004558632008431808, + "5342": 1.2285591810841128, + "5343": 0.00841086938191613, + "5344": 0.004558632008431808, + "5345": 1.3722051003541524, + "5346": 0.012969141435398991, + "5347": 0.9715258078637257, + "5348": 1.5462945600519686, + "5349": 0.004558632008431808, + "5350": -0.0, + "5351": 1.220736800740854, + "5352": -0.0, + "5353": 0.12079544617259473, + "5354": 1.134223351175805, + "5355": 0.6718224031357473, + "5356": 0.018691910629194595, + "5357": 1.7008768221100756, + "5358": 0.7288784313246972, + "5359": -0.0, + "5360": 1.5079562986898667, + "5361": -0.0, + "5362": -0.0, + "5363": 1.6000080438326316, + "5364": 0.1072356172840016, + "5365": -0.0, + "5366": 1.7014435207811027, + "5367": 0.03384824280250546, + "5368": -0.0, + "5369": 1.4780266434747942, + "5370": 0.5880501346945958, + "5371": -0.0, + "5372": 1.4370386980073384, + "5373": 0.9269969302208678, + "5374": 0.4831613492850786, + "5375": 1.4845310397681801, + "5376": -0.0, + "5377": 0.004558632008431808, + "5378": 1.0581443154983097, + "5379": -0.0, + "5380": -0.0, + "5381": 0.5053711086935503, + "5382": 0.8766554123094236, + "5383": 0.7021501522314791, + "5384": 0.9364175008522875, + "5385": -0.0, + "5386": -0.0, + "5387": 0.4259160966992507, + "5388": 1.0515630376504135, + "5389": -0.0, + "5390": 0.7355207066879184, + "5391": 0.004558632008431808, + "5392": 0.004558632008431808, + "5393": 0.6653690118874691, + "5394": -0.0, + "5395": 0.004557202708826157, + "5396": 0.5847194829971978, + "5397": -0.0, + "5398": -0.0, + "5399": 0.5650411997264027, + "5400": -0.0, + "5401": -0.0, + "5402": -0.0, + "5403": 0.00841086938191613, + "5404": -0.0, + "5405": 0.27213792270224424, + "5406": 0.00841086938191613, + "5407": 0.4219835179590414, + "5408": 0.4401964169332705, + "5409": 0.854611265532957, + "5410": 1.0783046905643585, + "5411": 1.6039520932346305, + "5412": -0.0, + "5413": 0.004558632008431808, + "5414": 0.19974689866411355, + "5415": -0.0, + "5416": 0.0656057612184809, + "5417": 0.030947290485022937, + "5418": -0.0, + "5419": 0.009117084071181667, + "5420": 1.5639057404609296, + "5421": 0.004558632008431808, + "5422": 0.004558632008431808, + "5423": 0.6926557460430267, + "5424": -0.0, + "5425": -0.0, + "5426": 1.0271940770889503, + "5427": 0.004558632008431808, + "5428": -0.0, + "5429": 1.1768774202132914, + "5430": 1.163445345519899, + "5431": 1.1533308498279764, + "5432": 0.5074653565408527, + "5433": -0.0, + "5434": -0.0, + "5435": 1.466221139719398, + "5436": 0.00841086938191613, + "5437": -0.0, + "5438": 0.7322603678616061, + "5439": 0.004558632008431808, + "5440": -0.0, + "5441": 0.9787540451048976, + "5442": 0.004558632008431808, + "5443": -0.0, + "5444": 0.5397571881927276, + "5445": 0.07016041966418611, + "5446": -0.0, + "5447": 1.798264668834206, + "5448": -0.0, + "5449": -0.0, + "5450": 1.296592053643474, + "5451": 0.03028118386755254, + "5452": -0.0, + "5453": 1.3107738572179992, + "5454": 0.6333626003949703, + "5455": 0.009117084071181667, + "5456": 0.9867043560374266, + "5457": 0.004558632008431808, + "5458": -0.0, + "5459": 0.8616491812536726, + "5460": 0.9480953115372632, + "5461": -0.0, + "5462": 1.3225618068722849, + "5463": 0.024967559478864067, + "5464": -0.0, + "5465": 1.2130502057957655, + "5466": 0.03384824280250546, + "5467": -0.0, + "5468": 0.7699721819610811, + "5469": -0.0, + "5470": -0.0, + "5471": 0.5078316984166555, + "5472": 0.9899313202007652, + "5473": 0.00841086938191613, + "5474": 1.6143207393635324, + "5475": 0.6221133106955126, + "5476": 0.011996370424748048, + "5477": 1.0111053328675876, + "5478": 0.97251712140921, + "5479": 0.9955627934055612, + "5480": 1.3662129803386578, + "5481": 0.2762800851114422, + "5482": 0.9916719691266045, + "5483": 0.9779670259078456, + "5484": 1.461846251976416, + "5485": 1.0109357118011477, + "5486": 1.1268250620306852, + "5487": 1.019469845731302, + "5488": 0.9950695676501926, + "5489": 1.504300564661689, + "5490": 0.5743365358232996, + "5491": 0.004558632008431808, + "5492": 1.0246157575925965, + "5493": 0.046817968113933184, + "5494": 0.004558632008431808, + "5495": 1.0220846006764412, + "5496": -0.0, + "5497": 0.004558632008431808, + "5498": 1.009274761317581, + "5499": 0.00841086938191613, + "5500": 0.04226168037189109, + "5501": 1.5618211220871143, + "5502": 1.2800553473213425, + "5503": -0.0, + "5504": 1.4779727746782767, + "5505": -0.0, + "5506": -0.0, + "5507": 0.8140075859333263, + "5508": -0.0, + "5509": -0.0, + "5510": 1.158142906989257, + "5511": -0.0, + "5512": 0.1577087353546804, + "5513": 0.9775032108541035, + "5514": 0.7948055671336796, + "5515": -0.0, + "5516": 1.5345272121754714, + "5517": 1.257386646349973, + "5518": 0.36258200353799785, + "5519": 1.5654096437256164, + "5520": 0.009117084071181667, + "5521": 0.012969141435398991, + "5522": 0.4855030060197521, + "5523": 0.6704931750093558, + "5524": 0.00841086938191613, + "5525": 1.1626250133499847, + "5526": 0.7606873901078748, + "5527": -0.0, + "5528": 1.27652208658892, + "5529": 0.4158837174381031, + "5530": 0.004558632008431808, + "5531": 1.0350844997564266, + "5532": -0.0, + "5533": 0.016554462405333748, + "5534": -0.0, + "5535": 0.004558632008431808, + "5536": 0.00841086938191613, + "5537": 0.9373005476402115, + "5538": -0.0, + "5539": -0.0, + "5540": 0.3805871564982632, + "5541": 0.06392840249192021, + "5542": 0.012969141435398991, + "5543": 1.2140440436813702, + "5544": 0.25938630491030534, + "5545": 0.03384824280250546, + "5546": 0.17826828772609793, + "5547": -0.0, + "5548": 0.011996370424748048, + "5549": 1.3116592770420494, + "5550": 0.009114225599005796, + "5551": -0.0, + "5552": 0.40040130090915005, + "5553": 0.011996370424748048, + "5554": -0.0, + "5555": 1.629105154717144, + "5556": 1.327077514724734, + "5557": -0.0, + "5558": 0.9609751302440985, + "5559": 0.3414149791939, + "5560": 0.004558632008431808, + "5561": 0.8907785606549192, + "5562": 0.004558632008431808, + "5563": -0.0, + "5564": 0.7454444481471963, + "5565": 0.03669798673310072, + "5566": 0.024967559478864067, + "5567": 0.44890054050500894, + "5568": 0.27027924807024106, + "5569": 0.00841086938191613, + "5570": 1.7632837493565825, + "5571": 1.248871482153038, + "5572": 0.004558632008431808, + "5573": 1.6430738906089821, + "5574": 0.645911454410435, + "5575": -0.0, + "5576": 1.6009070981259061, + "5577": -0.0, + "5578": -0.0, + "5579": 1.351846799015787, + "5580": -0.0, + "5581": 0.009117084071181667, + "5582": 0.5240652928944975, + "5583": -0.0, + "5584": 0.004558632008431808, + "5585": 0.8329655994699896, + "5586": -0.0, + "5587": -0.0, + "5588": 0.1263356782390565, + "5589": -0.0, + "5590": -0.0, + "5591": 0.4186843105268563, + "5592": 0.05222320650363407, + "5593": -0.0, + "5594": 1.4520596675897397, + "5595": 0.004558632008431808, + "5596": 0.004558632008431808, + "5597": -0.0, + "5598": -0.0, + "5599": -0.0, + "5600": 1.2462157042926165, + "5601": -0.0, + "5602": 0.00841086938191613, + "5603": 1.7419932600532708, + "5604": 0.004558632008431808, + "5605": 0.009117084071181667, + "5606": 0.9746580368760474, + "5607": 1.3908088221322286, + "5608": 0.004558632008431808, + "5609": 1.722862363018228, + "5610": 1.212781639684646, + "5611": 0.004558632008431808, + "5612": 1.1713363298533848, + "5613": 0.012969141435398991, + "5614": -0.0, + "5615": 0.7794123650969207, + "5616": 0.030947290485022937, + "5617": 0.00841086938191613, + "5618": 1.2199868116014185, + "5619": 0.00841086938191613, + "5620": 0.035504300689473266, + "5621": 1.3470950488695963, + "5622": 0.6144927891468067, + "5623": 0.012969141435398991, + "5624": 1.3391964346120395, + "5625": -0.0, + "5626": -0.0, + "5627": 1.1216163278842575, + "5628": -0.0, + "5629": -0.0, + "5630": 1.220228056896347, + "5631": 0.9528682992608971, + "5632": 0.2645312335606156, + "5633": 0.9318027114770487, + "5634": 0.015403870038529508, + "5635": 0.004558632008431808, + "5636": 0.9984925287924741, + "5637": 0.024967559478864067, + "5638": 0.018691910629194595, + "5639": 1.209727277587369, + "5640": 1.2835518984299328, + "5641": 1.1947912226717738, + "5642": 0.9552126743091383, + "5643": 0.018691910629194595, + "5644": -0.0, + "5645": 0.9476581696346937, + "5646": 1.3005423688291096, + "5647": 1.3416528013697024, + "5648": 0.986729383020979, + "5649": 1.275141918623378, + "5650": -0.0, + "5651": 1.5909193097062724, + "5652": 0.2697417142286897, + "5653": 0.2731312841654209, + "5654": 1.186542592275511, + "5655": 0.6067061385416069, + "5656": -0.0, + "5657": 1.5371702469602353, + "5658": 1.5287350674025724, + "5659": 1.3527609377536924, + "5660": 1.4501918707731287, + "5661": 0.004558632008431808, + "5662": 0.009117084071181667, + "5663": 0.8818943500827054, + "5664": 1.1596802982698515, + "5665": 0.018691910629194595, + "5666": 1.1554580201977258, + "5667": 0.004558632008431808, + "5668": -0.0, + "5669": 1.3840671183511843, + "5670": 0.00841086938191613, + "5671": 0.00841086938191613, + "5672": 0.00841086938191613, + "5673": 0.4697964130026883, + "5674": 0.6825734530912951, + "5675": 0.47084037801602474, + "5676": -0.0, + "5677": -0.0, + "5678": 1.2976110205244817, + "5679": 0.030947290485022937, + "5680": -0.0, + "5681": 0.8354719366422103, + "5682": 1.3478808731429703, + "5683": 0.00841086938191613, + "5684": 1.0498058498023288, + "5685": 0.6653690118874691, + "5686": -0.0, + "5687": 1.263589291202424, + "5688": 0.7065551841901541, + "5689": 0.0555240318366822, + "5690": 1.2977432675390208, + "5691": -0.0, + "5692": -0.0, + "5693": 0.07050175960541472, + "5694": -0.0, + "5695": 0.00841086938191613, + "5696": 1.3617951248338085, + "5697": -0.0, + "5698": 0.012969141435398991, + "5699": 0.9304864024768968, + "5700": 0.8466650729816454, + "5701": 0.8466650729816454, + "5702": 1.5903137019167235, + "5703": 0.9497981133256495, + "5704": -0.0, + "5705": 1.4335639114520846, + "5706": 0.004558632008431808, + "5707": -0.0, + "5708": 0.3745642629054262, + "5709": -0.0, + "5710": -0.0, + "5711": 1.1056544051212762, + "5712": 0.5369289892425275, + "5713": -0.0, + "5714": 1.4581625275119376, + "5715": 1.405492945878969, + "5716": 0.4524603361701814, + "5717": 1.44350858587973, + "5718": 1.2817689847484883, + "5719": -0.0, + "5720": 1.8237450977561225, + "5721": -0.0, + "5722": -0.0, + "5723": 1.4622192564558634, + "5724": 1.4169611181291641, + "5725": -0.0, + "5726": 1.5276310080383544, + "5727": -0.0, + "5728": 0.00841086938191613, + "5729": 1.2935445651200805, + "5730": -0.0, + "5731": 0.00841086938191613, + "5732": 0.5611451424948515, + "5733": 0.5098123143406731, + "5734": 0.004558632008431808, + "5735": 0.8434761326803005, + "5736": 0.4184649224797944, + "5737": 0.004558632008431808, + "5738": 0.8581980411549404, + "5739": 0.00841086938191613, + "5740": 0.06901993272705198, + "5741": 0.5846035228556512, + "5742": 0.3095062996805208, + "5743": 1.0593254512537011, + "5744": 1.5586034358547138, + "5745": 0.07260182016210624, + "5746": -0.0, + "5747": 0.25881973470345165, + "5748": 0.004558632008431808, + "5749": 0.977031376477439, + "5750": 0.9580619568026945, + "5751": -0.0, + "5752": -0.0, + "5753": 0.745274951869398, + "5754": -0.0, + "5755": 0.2042894470021688, + "5756": 0.9662777827007931, + "5757": 0.03384824280250546, + "5758": 0.4060271022034383, + "5759": 0.7051938297269834, + "5760": 0.4687716888471164, + "5761": 0.027989437753261202, + "5762": 1.4248032522919842, + "5763": 1.7956063850835242, + "5764": 1.4047147798758939, + "5765": 1.0638092797305436, + "5766": 1.4512245275884585, + "5767": 0.752999703196883, + "5768": 0.4430084246239167, + "5769": 0.7722185437127803, + "5770": 0.5701142824844412, + "5771": 1.376945130453033, + "5772": -0.0, + "5773": -0.0, + "5774": 0.9182958340544896, + "5775": 1.32238935291069, + "5776": 0.45107839944391004, + "5777": 1.4053616393402508, + "5778": 0.6392535975080764, + "5779": 1.4362082946502532, + "5780": 1.7584917241082312, + "5781": 0.6956111468495496, + "5782": -0.0, + "5783": 1.5425261195528357, + "5784": 0.4244086712348817, + "5785": 0.9961052835851278, + "5786": 1.30823722649662, + "5787": 1.2070677420632607, + "5788": -0.0, + "5789": 1.4487853312200443, + "5790": 1.0056099392316482, + "5791": -0.0, + "5792": 1.3212725735224446, + "5793": -0.0, + "5794": -0.0, + "5795": 1.2043242028844496, + "5796": 0.011996370424748048, + "5797": 0.011996370424748048, + "5798": 0.03537148717039752, + "5799": 0.9823141026073878, + "5800": -0.0, + "5801": 1.4457768887762075, + "5802": -0.0, + "5803": -0.0, + "5804": 0.8450328997874296, + "5805": 0.004558632008431808, + "5806": -0.0, + "5807": 1.2520627696117366, + "5808": 0.00841086938191613, + "5809": -0.0, + "5810": 1.3699164551175693, + "5811": 0.2385886508579842, + "5812": -0.0, + "5813": 1.2066662710706617, + "5814": 0.0798659620397829, + "5815": -0.0, + "5816": 0.7895134404245123, + "5817": 0.8631891401387158, + "5818": -0.0, + "5819": 1.0200618900305083, + "5820": -0.0, + "5821": -0.0, + "5822": 0.7098353514538359, + "5823": 0.8557417873175488, + "5824": 0.8606463904232604, + "5825": 0.7309633250854116, + "5826": 1.001517520728177, + "5827": 0.027989437753261202, + "5828": 1.1704021116997485, + "5829": 0.043379103955967495, + "5830": 0.08928947906233338, + "5831": 1.367572794544623, + "5832": -0.0, + "5833": -0.0, + "5834": 1.4456684243788132, + "5835": -0.0, + "5836": 0.004558632008431808, + "5837": 0.33026888377912633, + "5838": 0.018691910629194595, + "5839": 0.00841086938191613, + "5840": 1.568203184903998, + "5841": 0.004558632008431808, + "5842": 0.004558632008431808, + "5843": 0.9212274749108375, + "5844": 0.004558632008431808, + "5845": -0.0, + "5846": 1.1821788080157458, + "5847": 0.004558632008431808, + "5848": 0.009117084071181667, + "5849": 1.5238230197538254, + "5850": -0.0, + "5851": -0.0, + "5852": 1.2571881991817877, + "5853": -0.0, + "5854": -0.0, + "5855": 1.002909138069582, + "5856": 0.9872468685334663, + "5857": 0.004558632008431808, + "5858": 1.0048848425081556, + "5859": 0.07050175960541472, + "5860": -0.0, + "5861": 1.5333617330058602, + "5862": 0.8654613263419145, + "5863": -0.0, + "5864": 1.4850952449099828, + "5865": 0.012965103199326016, + "5866": -0.0, + "5867": 1.5583571780398606, + "5868": 0.5355810898927487, + "5869": 0.15193930925028848, + "5870": 1.427583279042849, + "5871": -0.0, + "5872": -0.0, + "5873": 1.6784954592906578, + "5874": 1.009798065958966, + "5875": 0.39638170370653003, + "5876": 0.8891945455326243, + "5877": 0.06492306853095353, + "5878": 0.011992675560016638, + "5879": 1.3236589061587205, + "5880": 0.004558632008431808, + "5881": 0.004558632008431808, + "5882": 0.7892894751887264, + "5883": -0.0, + "5884": -0.0, + "5885": 0.4402432626658082, + "5886": 0.5683615754586577, + "5887": 0.39860088744169586, + "5888": 1.6546319235274223, + "5889": 0.004560062254223774, + "5890": 0.004560062254223774, + "5891": 0.8670371760514485, + "5892": 0.00841348028865096, + "5893": 1.3642560928884258, + "5894": 1.209099778939678, + "5895": -0.0, + "5896": 0.8543913444973537, + "5897": 0.8262873860638266, + "5898": 0.998054546790707, + "5899": 0.00841348028865096, + "5900": 1.3411865796510705, + "5901": 0.023256773781783976, + "5902": 0.00841348028865096, + "5903": 0.9392965778244746, + "5904": -0.0, + "5905": -0.0, + "5906": 0.7102499519669906, + "5907": -0.0, + "5908": -0.0, + "5909": 1.531117902086848, + "5910": 0.4854607607459134, + "5911": -0.0, + "5912": 1.0753178160917354, + "5913": 0.035504300689473266, + "5914": -0.0, + "5915": 1.1101725601075496, + "5916": -0.0, + "5917": 0.004558632008431808, + "5918": 0.9015796654460599, + "5919": 0.0165493386223052, + "5920": 0.011996370424748048, + "5921": 1.0531974179036792, + "5922": 0.004558632008431808, + "5923": 0.9938172480187135, + "5924": 0.6917090011485975, + "5925": 0.053805725993642486, + "5926": 0.08385554612407317, + "5927": 1.1487166317063364, + "5928": -0.0, + "5929": 0.016821018726719157, + "5930": 0.8244287866157078, + "5931": 0.2152148960681838, + "5932": 0.28431715220548776, + "5933": 1.2524318326672625, + "5934": -0.0, + "5935": -0.0, + "5936": 0.9554687778766158, + "5937": 0.9957996314773072, + "5938": 0.03337590650146983, + "5939": 1.3367641162773332, + "5940": 1.4530566519238195, + "5941": -0.0, + "5942": 1.0670207125982125, + "5943": 0.004558632008431808, + "5944": 0.004558632008431808, + "5945": 1.1673791494454704, + "5946": 0.9336629062850079, + "5947": 0.03865390681184049, + "5948": 1.3244224106831617, + "5949": 0.923067409899594, + "5950": 0.00841086938191613, + "5951": 1.4134445741203348, + "5952": 0.018691910629194595, + "5953": 0.29661699741183556, + "5954": 1.4491225520213722, + "5955": 1.469642334038525, + "5956": 0.019966501192201943, + "5957": 0.7942126370852994, + "5958": 0.7797250336380628, + "5959": 1.4457114551002892, + "5960": 1.5002125698967765, + "5961": 0.015408589348188083, + "5962": 0.015408589348188083, + "5963": 0.9932370099477247, + "5964": 1.1439069246519404, + "5965": 0.004558632008431808, + "5966": 1.1724381391636554, + "5967": 0.8847200743561145, + "5968": 0.004558632008431808, + "5969": 0.9551528382864698, + "5970": -0.0, + "5971": 0.011996370424748048, + "5972": 0.5203212363655557, + "5973": -0.0, + "5974": -0.0, + "5975": 1.5512516576106947, + "5976": 0.21357981533827733, + "5977": 0.004558632008431808, + "5978": 1.0867096962959415, + "5979": -0.0, + "5980": -0.0, + "5981": -0.0, + "5982": -0.0, + "5983": 0.009114225599005796, + "5984": 0.5314271906714622, + "5985": -0.0, + "5986": -0.0, + "5987": 1.3163272852138554, + "5988": 1.092014380569021, + "5989": 0.43250280866724095, + "5990": 1.6566319525267919, + "5991": 0.8204706625064846, + "5992": 0.18470557964746367, + "5993": 1.5725760027606208, + "5994": 1.2110215560184783, + "5995": 0.00841086938191613, + "5996": 1.599701675088425, + "5997": 0.02187247612535633, + "5998": 0.02399112019315294, + "5999": 1.615467763886043, + "6000": 1.4676100910595091, + "6001": 1.1432594217986112, + "6002": 1.102789662703744, + "6003": 1.413771196602731, + "6004": -0.0, + "6005": 0.7379942406894856, + "6006": 0.5054969038436287, + "6007": 0.9982308330288072, + "6008": 0.509993580528074, + "6009": 0.00841086938191613, + "6010": 0.029524930530661197, + "6011": 1.684737494631827, + "6012": 0.9047018646260631, + "6013": 0.8480703212179577, + "6014": 1.0682399121363133, + "6015": 0.24988229283318544, + "6016": 0.6401124024818269, + "6017": 1.4707961444857751, + "6018": 0.011996370424748048, + "6019": 1.3102477087063273, + "6020": 1.0166920107177604, + "6021": 1.025711057950137, + "6022": 1.0615300664736815, + "6023": 1.4797504525445442, + "6024": 0.9471403030302998, + "6025": 1.5342104078525571, + "6026": 1.5508581572578644, + "6027": 1.2602795696508655, + "6028": 0.21814424154017514, + "6029": 1.3884383573745451, + "6030": 1.1405006102947408, + "6031": 0.9265826356802377, + "6032": 1.2672740360195598, + "6033": 0.004558632008431808, + "6034": 0.00841086938191613, + "6035": 1.7225029010375685, + "6036": 0.024967559478864067, + "6037": 0.018691910629194595, + "6038": 0.9574428491273077, + "6039": 0.8903155297965522, + "6040": 0.901460754198429, + "6041": 1.388065039039582, + "6042": -0.0, + "6043": -0.0, + "6044": 0.3757842818477267, + "6045": 0.011996370424748048, + "6046": -0.0, + "6047": 0.9355726564221358, + "6048": 0.004558632008431808, + "6049": 0.011996370424748048, + "6050": 1.4326181969012852, + "6051": 0.445968536486926, + "6052": -0.0, + "6053": 1.1141695075404614, + "6054": 0.4905989266347833, + "6055": 0.5818071892717339, + "6056": 0.5212629844450882, + "6057": 0.17457126733206305, + "6058": 0.030947290485022937, + "6059": 1.6394310313599476, + "6060": 1.184534793695422, + "6061": 0.9894544128199464, + "6062": 1.058099939280275, + "6063": -0.0, + "6064": 0.004558632008431808, + "6065": 0.6859497605142872, + "6066": -0.0, + "6067": -0.0, + "6068": 1.5651294276020289, + "6069": 0.36056879504355366, + "6070": 1.2623651929961357, + "6071": 0.6038743433115973, + "6072": 0.6653690118874691, + "6073": -0.0, + "6074": 1.5072025993258422, + "6075": 1.139335832974101, + "6076": 0.8991002263082918, + "6077": 0.9363595786785502, + "6078": -0.0, + "6079": 0.004558632008431808, + "6080": 1.3094061929587846, + "6081": 0.03950117460432034, + "6082": -0.0, + "6083": 1.3426144246830938, + "6084": -0.0, + "6085": -0.0, + "6086": 1.0354421763202486, + "6087": 0.17826828772609793, + "6088": 0.3010441860678247, + "6089": 0.9205331871940364, + "6090": 0.6725064286341865, + "6091": 0.00841086938191613, + "6092": 1.2412245786255185, + "6093": 1.2749534725676563, + "6094": 1.4278459134741184, + "6095": 1.7445506596926301, + "6096": 1.0317803689254728, + "6097": 0.5325597709216018, + "6098": 1.3953203990067162, + "6099": 1.3154190568635575, + "6100": 1.4125726978339814, + "6101": 1.3265005268468308, + "6102": 1.491820413820563, + "6103": 1.076614978540919, + "6104": 1.1239500134724678, + "6105": 0.17826828772609793, + "6106": 0.00841086938191613, + "6107": 1.0009165640937425, + "6108": 0.016554462405333748, + "6109": -0.0, + "6110": 0.9352606981884335, + "6111": 1.3121282160963004, + "6112": 0.3416492763732457, + "6113": 1.4218339597516714, + "6114": 0.1479997062993886, + "6115": 0.14805123138918835, + "6116": 0.6485282194226815, + "6117": 0.17123535007126914, + "6118": 0.649987743958855, + "6119": 0.8846923989606141, + "6120": -0.0, + "6121": -0.0, + "6122": 1.0, + "6123": 0.3095434291503252, + "6124": -0.0, + "6125": 1.1458866158316752, + "6126": -0.0, + "6127": -0.0, + "6128": 0.4305518670104394, + "6129": -0.0, + "6130": -0.0, + "6131": 0.19143325481419343, + "6132": -0.0, + "6133": -0.0, + "6134": 0.6024308020404452, + "6135": -0.0, + "6136": -0.0, + "6137": -0.0, + "6138": -0.0, + "6139": -0.0, + "6140": -0.0, + "6141": -0.0, + "6142": -0.0, + "6143": -0.0, + "6144": -0.0, + "6145": -0.0, + "6146": 0.9975025463691152, + "6147": 0.6024308020404452, + "6148": 0.19143325481419343, + "6149": 0.19143325481419343, + "6150": -0.0, + "6151": -0.0, + "6152": 0.3815804883091629, + "6153": -0.0, + "6154": -0.0, + "6155": 0.6722948170756379, + "6156": -0.0, + "6157": -0.0, + "6158": 1.161378479448699, + "6159": 0.4305518670104394, + "6160": -0.0, + "6161": 0.9975025463691152, + "6162": 0.02040615956008207, + "6163": 1.7944614114615023, + "6164": 1.1242219323448133, + "6165": 1.3172485804105636, + "6166": 1.6103027480458656, + "6167": 1.0767660577297835, + "6168": 0.2732933439379131, + "6169": 1.3223695802679103, + "6170": 0.4531078765754296, + "6171": 0.7920825939504395, + "6172": 1.3039643824306464, + "6173": 1.3623162387528334, + "6174": 1.3844803387666567, + "6175": 1.514522806968788, + "6176": 1.3667430469402055, + "6177": 0.3067518367019222, + "6178": 1.5168351135814508, + "6179": 1.4464811871268797, + "6180": 0.7345299214394703, + "6181": 1.2550327083958783, + "6182": 1.4313076001654323, + "6183": -0.0, + "6184": -0.0, + "6185": -0.0, + "6186": -0.0, + "6187": -0.0, + "6188": -0.0, + "6189": -0.0, + "6190": -0.0, + "6191": -0.0, + "6192": 1.40407541345106, + "6193": 1.3183697698891939, + "6194": 0.8112781244591328, + "6195": 1.8094701116163225, + "6196": 1.9943497041442486, + "6197": 1.2773629913225686, + "6198": 1.0057126290544274, + "6199": 1.39914796986106, + "6200": 1.7942320376189818, + "6201": 1.6865185791405808, + "6202": 1.0817725370780595, + "6203": 1.0505923536536599, + "6204": 1.4727719452654306, + "6205": 0.7856551677884495, + "6206": 1.7229238039678756, + "6207": 1.5774845474682817, + "6208": 1.1935094677014457, + "6209": 1.7717313604157172, + "6210": -0.0, + "6211": 0.3227569588973982, + "6212": 1.6644977792004616, + "6213": 0.7024665512903903, + "6214": -0.0, + "6215": -0.0, + "6216": 0.8900054062695013, + "6217": 0.2642702147261916, + "6218": 1.1886327631603684, + "6219": 0.12066572248279103, + "6220": 0.9778314248594763, + "6221": 0.28484848557340997, + "6222": 0.1473106669304539, + "6223": 0.5015014472254578, + "6224": 0.690904892714121, + "6225": -0.0, + "6226": -0.0, + "6227": 0.35752773236867974, + "6228": 0.053092652126686124, + "6229": -0.0, + "6230": 0.13047571663711086, + "6231": -0.0, + "6232": -0.0, + "6233": 0.9790981671667149, + "6234": 0.7799795512551292, + "6235": 0.6801625784548612, + "6236": 0.16112120608774108, + "6237": 0.8282865926009901, + "6238": 0.7542084238580741, + "6239": 0.04324154504802915, + "6240": 0.20931241280367252, + "6241": 0.548486608843174, + "6242": 1.0104024933607856, + "6243": 0.5352697297532727, + "6244": 0.6662377747908704, + "6245": 1.6597550791819728, + "6246": 0.8525119039687007, + "6247": 0.4513696834345856, + "6248": 0.6332302396333666, + "6249": 0.6152368875899179, + "6250": 1.0868507244790953, + "6251": 1.4616995775715496, + "6252": 1.48573046300078, + "6253": 1.2380266894425829, + "6254": 1.0699676203257211, + "6255": 1.4012928010064964, + "6256": 0.8454058304961714, + "6257": 0.8112781244591328, + "6258": -0.0, + "6259": 0.8112781244591328, + "6260": -0.0, + "6261": -0.0, + "6262": 0.6631968402398287, + "6263": 1.7772589085746051, + "6264": 1.1913206223207167, + "6265": 1.6344222313951513, + "6266": 1.5656009408583553, + "6267": 1.560206186236519, + "6268": 1.0457136474232775, + "6269": 1.1325301061352144, + "6270": 1.3057114755558352, + "6271": 1.2660277353470195, + "6272": 1.5730200957968143, + "6273": -0.0, + "6274": -0.0, + "6275": -0.0, + "6276": -0.0, + "6277": -0.0, + "6278": -0.0, + "6279": -0.0, + "6280": -0.0, + "6281": 0.9576204754943894, + "6282": 0.3212500929712953, + "6283": 0.967094114064218, + "6284": 0.7365739788877982, + "6285": 1.5137729850318373, + "6286": 1.4767344622929055, + "6287": 1.0509901504407742, + "6288": 0.18001486581386772, + "6289": 0.9301247750901163, + "6290": 1.0785042346116613, + "6291": -0.0, + "6292": 0.9709505944546686, + "6293": -0.0, + "6294": 0.9709505944546686, + "6295": -0.0, + "6296": -0.0, + "6297": 0.9709505944546686, + "6298": -0.0, + "6299": 0.9709505944546686, + "6300": 0.9709505944546686, + "6301": -0.0, + "6302": -0.0, + "6303": -0.0, + "6304": -0.0, + "6305": -0.0, + "6306": -0.0, + "6307": 0.8571920248236214, + "6308": 1.3625568467637992, + "6309": 1.1874162962803705, + "6310": 0.4826592711082137, + "6311": 0.9188838067310052, + "6312": 0.7239592953970978, + "6313": 0.9183692443627012, + "6314": 1.237907480135268, + "6315": 1.1567796494470395, + "6316": 0.8453509366224364, + "6317": 1.0226297788901695, + "6318": 0.4394969869215134, + "6319": -0.0, + "6320": -0.0, + "6321": -0.0, + "6322": -0.0, + "6323": 0.9967916319816366, + "6324": 0.3227569588973982, + "6325": -0.0, + "6326": 0.9780155566622414, + "6327": 1.295461844238322, + "6328": 1.1567796494470395, + "6329": 1.6387586809150083, + "6330": -0.0, + "6331": -0.0, + "6332": 0.934068055375491, + "6333": 0.4689955935892812, + "6334": -0.0, + "6335": 0.8112781244591328, + "6336": 1.595461844238322, + "6337": 1.319035274338866, + "6338": 1.3405071628991212, + "6339": 0.833970261618122, + "6340": 1.498638432202002, + "6341": 1.4581824366302765, + "6342": 0.8460046752593278, + "6343": 1.513188497496019, + "6344": 1.6973899617584054, + "6345": 1.2192731860703403, + "6346": 0.2887940781706933, + "6347": 1.5021482887711113, + "6348": 1.1153950613058088, + "6349": -0.0, + "6350": 1.3410098650829354, + "6351": 1.0195849635373468, + "6352": 0.6139110906520837, + "6353": 1.7172115390531286, + "6354": 1.5449853030373024, + "6355": -0.0, + "6356": 1.0380167919150876, + "6357": 1.2335098555458848, + "6358": 0.866534379141699, + "6359": 1.752661522327914, + "6360": 1.1085482616733489, + "6361": 1.0253692254481803, + "6362": 1.024573343855608, + "6363": 0.8985128775654457, + "6364": 1.2307623491385056, + "6365": 1.4244604307500146, + "6366": 0.495082954511632, + "6367": 0.12394986771100759, + "6368": 0.31909345858366484, + "6369": 0.9995643333907914, + "6370": -0.0, + "6371": 1.1932830413003235, + "6372": 0.7755593334828212, + "6373": 1.3767443426756838, + "6374": 1.2343862791056788, + "6375": 1.0504223274797175, + "6376": 1.35562366659688, + "6377": 1.469916513943151, + "6378": 0.27831888516628445, + "6379": 0.7734533059530796, + "6380": 0.7431374857762879, + "6381": 0.02040615956008207, + "6382": 0.024963891203803882, + "6383": 0.8433987432408059, + "6384": -0.0, + "6385": 0.00841086938191613, + "6386": 1.1371423813697765, + "6387": 0.9183252473102166, + "6388": 0.00841348028865096, + "6389": 1.124646226517079, + "6390": 0.00841348028865096, + "6391": 0.01541331173734973, + "6392": 1.3424061850682503, + "6393": 0.020412466987387384, + "6394": 0.01200006770894612, + "6395": 1.5814085222550724, + "6396": 0.7706569286172501, + "6397": 0.18397000745423653, + "6398": 1.7653469447092065, + "6399": -0.0, + "6400": -0.0, + "6401": 0.989661830436947, + "6402": 0.033858396127304624, + "6403": 0.39731922350960186, + "6404": 0.8304563144391974, + "6405": 0.36863432038186517, + "6406": 0.34150210642696044, + "6407": 1.2334512881263473, + "6408": 0.5879927841528958, + "6409": -0.0, + "6410": 1.3356512730542365, + "6411": -0.0, + "6412": 0.004560062254223774, + "6413": 1.7680496283852625, + "6414": 0.8579123191042716, + "6415": 0.6046525665647493, + "6416": 1.7498162128411603, + "6417": 0.3567848648968911, + "6418": 0.4804061358982946, + "6419": 1.050269930118506, + "6420": -0.0, + "6421": -0.0, + "6422": 0.9463837073857138, + "6423": -0.0, + "6424": -0.0, + "6425": 0.9631643286005671, + "6426": 1.56335194106861, + "6427": 1.5099758361688516, + "6428": 0.8928759560657067, + "6429": -0.0, + "6430": 0.25288747768110525, + "6431": 1.7661383714351877, + "6432": 0.59748397396936, + "6433": 1.4358971003573497, + "6434": 1.2750755213493243, + "6435": 1.4044058797750885, + "6436": -0.0, + "6437": 1.6582916665296743, + "6438": 0.9996032293065662, + "6439": 0.9856907829851781, + "6440": 1.2664723206627455, + "6441": -0.0, + "6442": -0.0, + "6443": 1.7184659469091281, + "6444": 1.0256918495065879, + "6445": 0.045009515460786804, + "6446": 1.2554253603903642, + "6447": 1.492548501964165, + "6448": 0.7481030890515021, + "6449": 1.102782595497047, + "6450": 0.5687677581688966, + "6451": 0.9018974318575558, + "6452": 0.8655776036995279, + "6453": -0.0, + "6454": 0.018714740508507806, + "6455": 0.6777690690846594, + "6456": 0.37538711510193146, + "6457": -0.0, + "6458": -0.0, + "6459": -0.0, + "6460": 0.27635359704355134, + "6461": 1.2170056706797328, + "6462": 1.2374183486079973, + "6463": 0.4456586786485913, + "6464": 1.0313276078768516, + "6465": 1.5877842331763954, + "6466": 1.828737316777699, + "6467": 1.8648134326175982, + "6468": 1.8765578010264923, + "6469": 1.5609520100617278, + "6470": 1.5836751602559964, + "6471": 0.9981896391979481, + "6472": 1.0728954669861936, + "6473": 1.7639116139347868, + "6474": 0.8712709822971176, + "6475": 1.6011662458588685, + "6476": 1.253338460673856, + "6477": 0.9590148953964152, + "6478": 0.5496031819058982, + "6479": 1.007640887690196, + "6480": 1.7150807019837104, + "6481": 0.8019765288667138, + "6482": 0.5612967957250602, + "6483": 1.220728902106009, + "6484": 0.7228578977329688, + "6485": -0.0, + "6486": 1.121366934374561, + "6487": 1.161980010650896, + "6488": 0.8341042168463493, + "6489": 1.3870185009367229, + "6490": 1.1181670633893352, + "6491": 1.2247883071117287, + "6492": 1.2012270732121866, + "6493": 1.5101102156948956, + "6494": 1.1393578015358845, + "6495": 1.4285640028723867, + "6496": 1.6186278631242095, + "6497": 0.939135444959106, + "6498": 0.6602109887157339, + "6499": 1.2749873773791296, + "6500": 1.238245914437377, + "6501": 1.1991813228887684, + "6502": 1.3313414070019263, + "6503": 1.315283030838361, + "6504": 0.1632346182809155, + "6505": 1.4926179504625232, + "6506": 0.23704125117072533, + "6507": 0.8967814591498017, + "6508": 1.5195022859012002, + "6509": -0.0, + "6510": -0.0, + "6511": -0.0, + "6512": -0.0, + "6513": -0.0, + "6514": 0.2318130500245902, + "6515": 0.2318130500245902, + "6516": 0.2318130500245902, + "6517": 1.0481407113001677, + "6518": 0.05815207083079879, + "6519": 1.894507569021385, + "6520": -0.0, + "6521": 0.9182958340544896, + "6522": -0.0, + "6523": -0.0, + "6524": -0.0, + "6525": -0.0, + "6526": -0.0, + "6527": 0.8042522359016422, + "6528": -0.0, + "6529": -0.0, + "6530": 0.6292492238560345, + "6531": 0.2578513272357068, + "6532": 1.0303600543761173, + "6533": 1.271518342132782, + "6534": 0.12767703735933228, + "6535": 0.04769555095320266, + "6536": 1.2766127194079426, + "6537": 1.2782952021610763, + "6538": 0.17093372122702577, + "6539": 1.4074317873633473, + "6540": 0.08143709227551568, + "6541": 0.4520320320557102, + "6542": 1.7829887391713088, + "6543": 1.438881901753908, + "6544": 1.6471570763622112, + "6545": 1.4240021426361438, + "6546": 0.8758727342974806, + "6547": -0.0, + "6548": 1.7937631823225162, + "6549": 1.5613980418444025, + "6550": 1.1372236153073092, + "6551": 1.084910775018238, + "6552": 0.0450228959941397, + "6553": 0.018709027464739895, + "6554": 1.1426020911532995, + "6555": 1.4180284968318042, + "6556": 1.4367834930380707, + "6557": 1.6713822547313266, + "6558": 0.8840389211532332, + "6559": 1.1400972961984288, + "6560": 1.502558662061036, + "6561": 0.8165983459771495, + "6562": 0.9424940029752549, + "6563": 1.1369024237442962, + "6564": 1.4954544996683257, + "6565": 1.2711125208680765, + "6566": 1.5712950580973066, + "6567": -0.0, + "6568": 0.746125734552487, + "6569": 0.9241820369237173, + "6570": 1.2853074640446553, + "6571": 0.4150783711222936, + "6572": 1.2297861636097227, + "6573": 0.008418707257428819, + "6574": -0.0, + "6575": 0.8777060337339344, + "6576": 0.039129607150010584, + "6577": 0.012007469545465778, + "6578": 0.8862555271848516, + "6579": 1.0720511199397822, + "6580": 0.015422765766524089, + "6581": 1.21908427047427, + "6582": -0.0, + "6583": 0.1219675618221807, + "6584": 1.5051438343990307, + "6585": 1.4826317317341116, + "6586": 1.4910072956906186, + "6587": 1.487172581907652, + "6588": 1.164019758696964, + "6589": 0.01691025045350865, + "6590": 1.387567558463013, + "6591": 1.1652412708687372, + "6592": 0.7326409702996652, + "6593": 1.2692317019614208, + "6594": 1.2375003263796993, + "6595": 0.08683075445483111, + "6596": 1.3173993459516518, + "6597": 1.44343473552608, + "6598": 1.5475038176548037, + "6599": 1.7896177022671005, + "6600": 0.49934922908146917, + "6601": 0.5435644431995964, + "6602": -0.0, + "6603": -0.0, + "6604": -0.0, + "6605": -0.0, + "6606": -0.0, + "6607": -0.0, + "6608": -0.0, + "6609": 1.1994602933016414, + "6610": 0.8856453196218467, + "6611": 1.0766610857513823, + "6612": 1.4270662136711036, + "6613": 1.4323405341366657, + "6614": 1.7550334499573512, + "6615": 1.3206189829633204, + "6616": 1.2521756879218444, + "6617": 1.21102080340008, + "6618": 1.604457412381767, + "6619": 1.0969644196841402, + "6620": 1.6358111976539875, + "6621": 1.5466979835688237, + "6622": 0.7419859252984399, + "6623": 0.9550353149543365, + "6624": 0.14175926095812236, + "6625": 0.020425094262998413, + "6626": 0.6573492408663155, + "6627": 0.9977095041858128, + "6628": 0.05702277162497704, + "6629": 0.9182958340544896, + "6630": 0.9182958340544896, + "6631": 0.9182958340544896, + "6632": 0.9656729078006838, + "6633": 1.1591394262342751, + "6634": 0.775264029393902, + "6635": 1.308129282931671, + "6636": 1.7047900757043422, + "6637": 1.3684207326946973, + "6638": 1.4744785391639046, + "6639": 1.2259790836389912, + "6640": 0.5438880588359991, + "6641": 1.0233346335734135, + "6642": 0.2932641010843183, + "6643": 0.04639149741759955, + "6644": 0.8126676844494222, + "6645": 1.034185439126519, + "6646": 1.0093663749725168, + "6647": 1.4825874902220881, + "6648": 0.7494450252598762, + "6649": 0.6404096585077949, + "6650": 1.1563627083234913, + "6651": 0.4563731748849948, + "6652": -0.0, + "6653": -0.0, + "6654": -0.0, + "6655": -0.0, + "6656": -0.0, + "6657": -0.0, + "6658": -0.0, + "6659": -0.0, + "6660": -0.0, + "6661": -0.0, + "6662": -0.0, + "6663": -0.0, + "6664": -0.0, + "6665": -0.0, + "6666": -0.0, + "6667": -0.0, + "6668": -0.0, + "6669": -0.0, + "6670": -0.0, + "6671": -0.0, + "6672": -0.0, + "6673": -0.0, + "6674": -0.0, + "6675": -0.0, + "6676": -0.0, + "6677": -0.0, + "6678": -0.0, + "6679": 0.7935488788754366, + "6680": 1.2955893095939994, + "6681": 0.027125929850152948, + "6682": -0.0, + "6683": 0.3670318829954126, + "6684": 0.052994915230820984, + "6685": 0.01656985395946737, + "6686": 0.8737212087710858, + "6687": 0.008418707257428819, + "6688": -0.0, + "6689": 0.6630689642178443, + "6690": 0.4404894008962722, + "6691": 0.24229218908241482, + "6692": 0.24229218908241482, + "6693": -0.0, + "6694": -0.0, + "6695": 1.0, + "6696": -0.0, + "6697": -0.0, + "6698": 0.26676498780302604, + "6699": -0.0, + "6700": 0.057555129186760506, + "6701": 1.48346038943207, + "6702": -0.0, + "6703": 0.03843984183123706, + "6704": 1.4675658546651515, + "6705": 1.327476935958975, + "6706": 0.008581504290529934, + "6707": 1.1812590516770034, + "6708": 0.8101057156463356, + "6709": 1.401282413022612, + "6710": 1.4057292437944704, + "6711": 1.0375136442398907, + "6712": 0.9804691319631494, + "6713": 1.822458194339958, + "6714": 0.4656352359258907, + "6715": 0.33560039954950077, + "6716": 1.03740818431753, + "6717": 1.0179812441860134, + "6718": 1.0382314118941571, + "6719": 0.576625753706171, + "6720": 1.1619069963506372, + "6721": 1.2205059100307385, + "6722": 1.112859046805521, + "6723": 0.9994767006883718, + "6724": 0.5665622546238868, + "6725": 1.1276031582092922, + "6726": 0.9849959048466631, + "6727": 0.8118670409796932, + "6728": 0.8779186771508406, + "6729": 0.3148980017704087, + "6730": 0.47165314206919423, + "6731": 0.9547857000367956, + "6732": 0.7589399018168701, + "6733": 0.9420527519566514, + "6734": 1.250729525083581, + "6735": 1.1467820970129428, + "6736": 0.5108482332269011, + "6737": 1.347028697677919, + "6738": 0.9133977096790896, + "6739": 0.7741679918343144, + "6740": 1.5000504723027166, + "6741": 1.018948858843732, + "6742": 1.319554854233325, + "6743": 1.127433003671918, + "6744": 1.0434761087827167, + "6745": 0.6248658301070793, + "6746": 1.2180980462307405, + "6747": 0.019997302153962906, + "6748": -0.0, + "6749": 0.9604390622179225, + "6750": 0.004564358678305205, + "6751": 0.01201488108905411, + "6752": 0.01872045727443096, + "6753": 0.7898070381469929, + "6754": 1.203654480064079, + "6755": 1.454571308227253, + "6756": 1.0220766533023808, + "6757": -0.0, + "6758": 1.4011150867615743, + "6759": -0.0, + "6760": -0.0, + "6761": 1.2616499484015575, + "6762": 0.8291233752256665, + "6763": 0.9365978853908379, + "6764": 1.5840326590038463, + "6765": 0.015422765766524089, + "6766": -0.0, + "6767": 0.9999021210964483, + "6768": 0.8012639551201519, + "6769": 0.29478549420658023, + "6770": 1.087875815145302, + "6771": 0.004562925588200431, + "6772": -0.0, + "6773": 1.585990029367138, + "6774": 1.4211107635923965, + "6775": 1.4973104097020444, + "6776": 1.6714694570735713, + "6777": -0.0, + "6778": 1.7374180359300728, + "6779": 1.2540103166524585, + "6780": 1.6154390650067583, + "6781": 0.8167358330253276, + "6782": 1.49363181403479, + "6783": 1.276240051881928, + "6784": -0.0, + "6785": -0.0, + "6786": -0.0, + "6787": -0.0, + "6788": -0.0, + "6789": -0.0, + "6790": 0.5921291557570447, + "6791": 1.4558159188125885, + "6792": 1.6835238556472396, + "6793": 0.01201488108905411, + "6794": 0.027436504136110092, + "6795": 0.827385563066854, + "6796": 0.9951398476805787, + "6797": 0.8147827485900763, + "6798": 1.349929894669073, + "6799": 1.1355050575110857, + "6800": 0.19996496572053807, + "6801": 1.1692668945606823, + "6802": 0.8087617037200443, + "6803": 0.008418707257428819, + "6804": 1.61036204439992, + "6805": 0.012007469545465778, + "6806": 0.015422765766524089, + "6807": 0.5203524572046742, + "6808": 0.043431773919342276, + "6809": 0.012007469545465778, + "6810": 1.4447478019790707, + "6811": 1.0766130948562298, + "6812": 0.03412818220876719, + "6813": 0.9202166220478334, + "6814": 0.027832893441527992, + "6815": 0.02384002938194269, + "6816": 1.6156933889107288, + "6817": 0.4020728384136555, + "6818": 0.14668635251802645, + "6819": 1.1438864383165153, + "6820": -0.0, + "6821": -0.0, + "6822": 1.321798985045764, + "6823": 1.1325046935866014, + "6824": 1.315147901803981, + "6825": 1.3910383336642473, + "6826": 0.004562925588200431, + "6827": 0.13416177700735799, + "6828": 0.8868717049940837, + "6829": 0.008418707257428819, + "6830": -0.0, + "6831": 1.5903758756655213, + "6832": -0.0, + "6833": -0.0, + "6834": 1.2556729561890516, + "6835": -0.0, + "6836": -0.0, + "6837": 0.894397825383765, + "6838": 0.1520000168515056, + "6839": 0.7245739234877268, + "6840": 1.456452673969616, + "6841": 1.069642175442928, + "6842": 0.004562925588200431, + "6843": 1.6226151228135877, + "6844": 0.4679910869989404, + "6845": -0.0, + "6846": 1.550382631544302, + "6847": 0.021892424219578984, + "6848": 0.04040795653412515, + "6849": 0.2886767491713822, + "6850": -0.0, + "6851": 0.004562925588200431, + "6852": 0.7547216493134803, + "6853": 0.48188248706923825, + "6854": 0.008418707257428819, + "6855": 1.3146080557155326, + "6856": 0.020425094262998413, + "6857": 0.012007469545465778, + "6858": 1.5181842524759352, + "6859": 1.5202861043266758, + "6860": 1.495510974251652, + "6861": 1.5186038347191921, + "6862": 1.1459936215421558, + "6863": 0.008418707257428819, + "6864": 1.3472042149260237, + "6865": 0.004562925588200431, + "6866": -0.0, + "6867": 1.2103013486952379, + "6868": 1.4026277750953673, + "6869": 0.2829047929798921, + "6870": 0.3491843735073079, + "6871": -0.0, + "6872": 1.0, + "6873": 0.7228578977329688, + "6874": 1.43703905325438, + "6875": 1.2637170468262016, + "6876": 1.5490094309750648, + "6877": 1.1768943034407875, + "6878": 1.4554710225248377, + "6879": 1.7298607120024665, + "6880": 1.0185640351683036, + "6881": 0.1254423340673554, + "6882": 1.3807184072679064, + "6883": 0.2661020682142452, + "6884": 0.06227266891729258, + "6885": 1.3711573310820449, + "6886": 0.8091257247688577, + "6887": 0.7124313724470187, + "6888": 1.599152992324949, + "6889": -0.0, + "6890": -0.0, + "6891": -0.0, + "6892": -0.0, + "6893": -0.0, + "6894": 1.2600572293144947, + "6895": 1.430824807233778, + "6896": 1.2226753681623483, + "6897": 1.286201457163584, + "6898": 1.129926452749769, + "6899": 0.8346482851813828, + "6900": -0.0, + "6901": -0.0, + "6902": 0.9182958340544896, + "6903": -0.0, + "6904": 0.7918583525674836, + "6905": -0.0, + "6906": -0.0, + "6907": -0.0, + "6908": 0.5916727785823275, + "6909": -0.0, + "6910": 0.5826348394809485, + "6911": 1.1833626438646303, + "6912": 1.4616967263343044, + "6913": 1.4388669410629686, + "6914": 1.4769456481579277, + "6915": 1.2430854085784493, + "6916": 1.3340348097981807, + "6917": 1.042479489783069, + "6918": 1.4063206741958665, + "6919": -0.0, + "6920": 1.5010751577096348, + "6921": 0.008418707257428819, + "6922": 0.008418707257428819, + "6923": 1.0027684677275028, + "6924": 0.012007469545465778, + "6925": -0.0, + "6926": 0.9966400667533863, + "6927": 0.2905437003401793, + "6928": -0.0, + "6929": 1.699425811818181, + "6930": 1.2688352895965866, + "6931": 0.004562925588200431, + "6932": 1.4450985167355708, + "6933": -0.0, + "6934": -0.0, + "6935": 1.080905001433145, + "6936": -0.0, + "6937": -0.0, + "6938": 0.9417639837828559, + "6939": -0.0, + "6940": -0.0, + "6941": 0.9944533310193511, + "6942": 0.008418707257428819, + "6943": 0.021892424219578984, + "6944": 0.015422765766524089, + "6945": 0.5645896295134822, + "6946": 0.004562925588200431, + "6947": 1.3888347625026891, + "6948": 0.39294354181274055, + "6949": 0.20972924531203996, + "6950": 1.0260463104060678, + "6951": 0.8941455683275377, + "6952": 0.018709027464739895, + "6953": 0.7237604574193595, + "6954": 0.14227330635498492, + "6955": -0.0, + "6956": 0.3397222456652506, + "6957": -0.0, + "6958": 0.012007469545465778, + "6959": 0.8822824449111784, + "6960": 0.018709027464739895, + "6961": 0.012007469545465778, + "6962": 0.9865222585787874, + "6963": 0.012007469545465778, + "6964": 0.004562925588200431, + "6965": 0.9461935670384394, + "6966": 0.7986326787402317, + "6967": 0.04369295280628464, + "6968": 0.8927301937694311, + "6969": 0.012007469545465778, + "6970": 0.004562925588200431, + "6971": 1.307219527592109, + "6972": 0.1563126207763307, + "6973": -0.0, + "6974": 1.4455415267411529, + "6975": 1.0027231945766555, + "6976": 0.008418707257428819, + "6977": 1.188432686331675, + "6978": 0.559892969406708, + "6979": 0.6736595420592068, + "6980": 0.9963797376925712, + "6981": 0.9102148285124605, + "6982": 0.5841832647307442, + "6983": 1.0051765256933343, + "6984": 0.4418734382656716, + "6985": 0.38990605322295946, + "6986": 1.5271294283353802, + "6987": 0.17558680566034832, + "6988": 0.028014788861117627, + "6989": 0.5619024364141645, + "6990": 0.01998496966143018, + "6991": 0.00456149344716018, + "6992": 1.3333225041920347, + "6993": 0.33746260844312426, + "6994": -0.0, + "6995": 1.6681174924275413, + "6996": 1.9692503734925726, + "6997": 0.004562925588200431, + "6998": 1.910813499742703, + "6999": 0.021892424219578984, + "7000": -0.0, + "7001": 0.8834843955556244, + "7002": -0.0, + "7003": 0.9695695191084204, + "7004": 0.7455583393925111, + "7005": 0.7290446868295093, + "7006": 0.20302789943485897, + "7007": 1.4017634089015691, + "7008": -0.0, + "7009": -0.0, + "7010": 0.9795673391215363, + "7011": 0.008418707257428819, + "7012": -0.0, + "7013": 1.626417088475924, + "7014": 0.015422765766524089, + "7015": 0.012007469545465778, + "7016": 0.7887130081089584, + "7017": -0.0, + "7018": 0.008418707257428819, + "7019": 1.6208702929653602, + "7020": 0.03387872239487684, + "7021": 0.004562925588200431, + "7022": 1.1903909519099152, + "7023": 0.8666990482356316, + "7024": 0.004562925588200431, + "7025": 1.3973576218179131, + "7026": 0.6549024606032677, + "7027": 1.0978498049724907, + "7028": 1.8838460400885062, + "7029": 1.283900781212956, + "7030": 0.004562925588200431, + "7031": 1.1176304432242283, + "7032": -0.0, + "7033": -0.0, + "7034": 0.1520665488095682, + "7035": -0.0, + "7036": -0.0, + "7037": 0.6446599664554451, + "7038": 0.9983845900391204, + "7039": 0.9981057554906488, + "7040": 1.4085666508309629, + "7041": -0.0, + "7042": -0.0, + "7043": 0.9885492926186212, + "7044": 0.6913738140966351, + "7045": 0.009125670848803863, + "7046": 1.7266806727753938, + "7047": 0.021892424219578984, + "7048": -0.0, + "7049": 0.992563136012236, + "7050": 0.016574991223834344, + "7051": 0.9137564309378818, + "7052": 0.5280538947880459, + "7053": 1.3362625226141163, + "7054": 1.1315349935646584, + "7055": 0.9942970470125815, + "7056": 0.009128536901438172, + "7057": 0.004564358678305205, + "7058": 1.3925175339955884, + "7059": 0.004564358678305205, + "7060": 0.938148161599496, + "7061": 0.9837236796931188, + "7062": 1.25941328176898, + "7063": 0.008421323322937465, + "7064": 1.688271675510624, + "7065": -0.0, + "7066": 0.008421323322937465, + "7067": 1.1286444606141348, + "7068": 0.5040828652336987, + "7069": 0.004564358678305205, + "7070": 1.278016957520204, + "7071": 0.6328062098821431, + "7072": 0.012011174102656907, + "7073": 1.4778001097645306, + "7074": 1.1702017280553634, + "7075": 0.7870363280942315, + "7076": 1.118304277940124, + "7077": 0.717847162823693, + "7078": 0.8370612110350745, + "7079": 1.0228755585819047, + "7080": 0.5708902789335144, + "7081": 0.5783699488015857, + "7082": 1.3822447348554612, + "7083": 1.5376230000357332, + "7084": 0.9371486897969707, + "7085": 1.960183714803222, + "7086": 1.6772647338066187, + "7087": 0.9976504894884344, + "7088": 1.082524704621351, + "7089": 1.025107148974751, + "7090": 1.013232966446658, + "7091": 1.4121025885328127, + "7092": 1.7112412788922948, + "7093": -0.0, + "7094": 1.3367027881165998, + "7095": 0.48048239710880447, + "7096": 0.4768824811316965, + "7097": 1.147148547367753, + "7098": 0.9873145310505322, + "7099": 0.06241696166556735, + "7100": 1.4339182180215133, + "7101": -0.0, + "7102": -0.0, + "7103": 1.287518082313466, + "7104": 1.035900528370759, + "7105": 0.027134257681982313, + "7106": 1.2769574520514868, + "7107": 0.030984563331676103, + "7108": 0.021899082223187268, + "7109": 0.5038529298828788, + "7110": -0.0, + "7111": 0.004564358678305205, + "7112": 1.712843063874736, + "7113": 0.403133604767441, + "7114": 0.012011174102656907, + "7115": 0.9937134675136896, + "7116": -0.0, + "7117": 0.008421323322937465, + "7118": 0.7998754070995648, + "7119": -0.0, + "7120": 0.004564358678305205, + "7121": 0.9704937123487523, + "7122": -0.0, + "7123": -0.0, + "7124": 0.07300220603908476, + "7125": -0.0, + "7126": -0.0, + "7127": 1.2131913472233455, + "7128": 0.4879838947172912, + "7129": 0.012011174102656907, + "7130": 1.0207552360448946, + "7131": 0.008421323322937465, + "7132": -0.0, + "7133": -0.0, + "7134": 0.008421323322937465, + "7135": -0.0, + "7136": 1.8080925237244032, + "7137": 0.004564358678305205, + "7138": 0.06767808810113152, + "7139": 0.96890169768452, + "7140": 0.02327819627194615, + "7141": 0.5038529298828788, + "7142": 1.388731055081557, + "7143": -0.0, + "7144": -0.0, + "7145": 0.9831012375448931, + "7146": 0.02802325016054464, + "7147": 0.008421323322937465, + "7148": 0.8073313266519866, + "7149": 0.9075689596411212, + "7150": -0.0, + "7151": 1.4951811003049216, + "7152": 0.16169425937929627, + "7153": -0.0, + "7154": 1.091239155656624, + "7155": 0.2887954669300811, + "7156": 0.008421323322937465, + "7157": 0.015432232150778083, + "7158": 0.004565792718436464, + "7159": -0.0, + "7160": 0.4378227705159492, + "7161": 0.2502155547876825, + "7162": -0.0, + "7163": -0.0, + "7164": -0.0, + "7165": -0.0, + "7166": -0.0, + "7167": 0.13443189213439916, + "7168": 1.0138008323523398, + "7169": 0.3735713615189073, + "7170": -0.0, + "7171": -0.0, + "7172": 1.2179728696099772, + "7173": 0.8524704511935852, + "7174": 1.0409895551032162, + "7175": 1.0939202666657108, + "7176": -0.0, + "7177": -0.0, + "7178": 0.039560194140894164, + "7179": 0.02956992547517179, + "7180": -0.0, + "7181": 1.0506440532431383, + "7182": 0.004565792718436464, + "7183": 0.05301415341463972, + "7184": 0.7188043116830248, + "7185": -0.0, + "7186": -0.0, + "7187": -0.0, + "7188": -0.0, + "7189": -0.0, + "7190": -0.0, + "7191": -0.0, + "7192": -0.0, + "7193": -0.0, + "7194": 0.993842667858774, + "7195": 0.004565792718436464, + "7196": 1.5626933793890299, + "7197": 0.7129388285716857, + "7198": 1.0932253513954349, + "7199": 1.5750902046290483, + "7200": 1.4078486684236071, + "7201": -0.0, + "7202": -0.0, + "7203": -0.0, + "7204": -0.0, + "7205": -0.0, + "7206": -0.0, + "7207": -0.0, + "7208": -0.0, + "7209": -0.0, + "7210": 1.0369167902753775, + "7211": 0.665709532437066, + "7212": -0.0, + "7213": 0.05299848370317531, + "7214": -0.0, + "7215": -0.0, + "7216": -0.0, + "7217": -0.0, + "7218": 0.008434429531203042, + "7219": 0.47601874850669046, + "7220": 0.17687442533090786, + "7221": -0.0, + "7222": 0.6466999746672717, + "7223": 0.14755321876868696, + "7224": 0.027478760390963766, + "7225": 0.42696817782398244, + "7226": 0.1471685916295229, + "7227": 0.03395007100235168, + "7228": 0.8346638592514676, + "7229": 1.5237125110604075, + "7230": -0.0, + "7231": 1.1094795560141726, + "7232": 0.024057835739276112, + "7233": 0.01874336163425094, + "7234": 0.9471130862778782, + "7235": 0.11802979959734547, + "7236": 0.11802979959734547, + "7237": 1.0786716802575385, + "7238": 0.7464494722988527, + "7239": -0.0, + "7240": 1.0848914644395513, + "7241": 0.008437055961204809, + "7242": 0.027184339185425736, + "7243": 0.8168798690800615, + "7244": 1.0355012354232247, + "7245": 0.9945115198116061, + "7246": 1.098950138390679, + "7247": -0.0, + "7248": 0.12255952793578198, + "7249": 0.9930436510278338, + "7250": 0.7846227990461808, + "7251": 0.23222757141378447, + "7252": 1.4511797218614833, + "7253": 0.8595480963525018, + "7254": 0.1284281392545665, + "7255": 1.4969402416058353, + "7256": 1.1705382578846153, + "7257": 0.9100534290139191, + "7258": 1.3287096132675527, + "7259": 0.9425465032866975, + "7260": 1.076687008218049, + "7261": 0.8530758668217898, + "7262": 0.9271130730308779, + "7263": 0.685644110546105, + "7264": 1.6920905113231353, + "7265": 1.277501110543578, + "7266": 0.004574416963820388, + "7267": 1.364191493609495, + "7268": 0.6035334425872304, + "7269": 0.016611046872582087, + "7270": 1.2956133863452393, + "7271": 0.020475769591316764, + "7272": 0.009148652575639215, + "7273": 1.3817997755691822, + "7274": 0.7200210310489739, + "7275": -0.0, + "7276": 1.6052373898542713, + "7277": 0.7788757308126179, + "7278": 0.15506853569505874, + "7279": 1.3444857367952834, + "7280": 0.3160118210794245, + "7281": 0.42734458235241224, + "7282": 0.6485096248436713, + "7283": 0.024080161948591992, + "7284": -0.0, + "7285": 1.1409805166663223, + "7286": -0.0, + "7287": -0.0, + "7288": -0.0, + "7289": -0.0, + "7290": -0.0, + "7291": 1.104532151333965, + "7292": 0.027504180666150978, + "7293": -0.0, + "7294": 0.945082011336554, + "7295": 0.9936160779448946, + "7296": 0.9996570386662792, + "7297": 1.40623265074423, + "7298": 0.045282212480869645, + "7299": 0.15627242775958938, + "7300": 1.4699061903880382, + "7301": 0.18712872022403249, + "7302": -0.0, + "7303": 1.2166718810716715, + "7304": -0.0, + "7305": 0.08588921914030485, + "7306": 0.9193831608439876, + "7307": -0.0, + "7308": 0.004577299356318893, + "7309": 0.7561442369449316, + "7310": -0.0, + "7311": 0.8455593925607012, + "7312": 1.0070651975856124, + "7313": 0.9966105606488752, + "7314": 0.562793683652914, + "7315": 1.1531127421265415, + "7316": 0.11601567070577255, + "7317": 0.004577299356318893, + "7318": 1.9057181026748866, + "7319": 0.015470221735454969, + "7320": 0.48135453808192386, + "7321": 0.09187608703680955, + "7322": 0.021959199473374068, + "7323": 0.008444945659396725, + "7324": 1.1641694323154754, + "7325": 0.8639861906875093, + "7326": 0.7814765922297886, + "7327": 0.7687339960841308, + "7328": -0.0, + "7329": 0.05788664443527229, + "7330": 0.9685375512964218, + "7331": 0.539676111754863, + "7332": 0.9821119288285299, + "7333": 0.661560963838618, + "7334": 1.218395383837351, + "7335": 0.21535298947417306, + "7336": 0.8676652594149364, + "7337": 0.32349373069800474, + "7338": -0.0, + "7339": 0.5823434044319343, + "7340": -0.0, + "7341": -0.0, + "7342": 0.9879659596248487, + "7343": 0.23702925800851518, + "7344": 0.011848637169440686, + "7345": 0.4063717631529591, + "7346": 0.6259961432601185, + "7347": 0.16547446147157865, + "7348": 1.121411563690989, + "7349": 0.014447661803089039, + "7350": 0.007879878983628776, + "7351": 0.25957293942019544, + "7352": 0.007879878983628776, + "7353": 0.007879878983628776, + "7354": 0.29631328767537296, + "7355": 0.06486132485415436, + "7356": 0.007879878983628776, + "7357": 0.9249164169744823, + "7358": -0.0, + "7359": 0.06169118265340901, + "7360": 0.10079814489395243, + "7361": 0.007879878983628776, + "7362": 0.014447661803089039, + "7363": 0.6779205464649829, + "7364": -0.0, + "7365": 0.020519815262489933, + "7366": 0.9485081883086381, + "7367": 0.04728392296728322, + "7368": 0.10866553073373307, + "7369": 0.3290439363657939, + "7370": 0.6608358740611265, + "7371": 0.03369296949143174, + "7372": 1.6253195245677157, + "7373": -0.0, + "7374": -0.0, + "7375": 0.7121051096632665, + "7376": 1.3385481073557541, + "7377": 0.8991567340587547, + "7378": 1.0537680170233188, + "7379": 0.24028735606285062, + "7380": 0.5983611491702476, + "7381": 0.9585780838116618, + "7382": -0.0, + "7383": -0.0, + "7384": 1.0729508741708553, + "7385": 0.012044624725514881, + "7386": -0.0, + "7387": 0.6686190397887954, + "7388": 1.0976433454664107, + "7389": 0.3439037183520064, + "7390": 1.3794258301831337, + "7391": -0.0, + "7392": -0.0, + "7393": 0.31299741822002775, + "7394": -0.0, + "7395": -0.0, + "7396": 0.9239811900490077, + "7397": 0.009154417103171112, + "7398": 0.04313152623713704, + "7399": 0.9004505079373013, + "7400": -0.0, + "7401": -0.0, + "7402": 0.7642708264752107, + "7403": -0.0, + "7404": 0.004578741990197366, + "7405": -0.0, + "7406": 0.8748500898075962, + "7407": -0.0, + "7408": 1.277207541359715, + "7409": 0.5296167075788243, + "7410": 0.09124859267541072, + "7411": 1.0946065771350453, + "7412": 0.3799880325492529, + "7413": 0.03952247037364048, + "7414": 1.3694201845038176, + "7415": -0.0, + "7416": -0.0, + "7417": 0.8334743890696608, + "7418": 0.7791601327182688, + "7419": -0.0, + "7420": 0.9357203805583625, + "7421": 1.2680885963038608, + "7422": 0.8406720691135188, + "7423": 0.6399653201472493, + "7424": 0.04889468514109112, + "7425": -0.0, + "7426": 1.3116938973676606, + "7427": 0.008447579034040788, + "7428": -0.0, + "7429": 1.484947669228873, + "7430": 0.28490633187056047, + "7431": 0.2166103506623191, + "7432": 0.9323103246632555, + "7433": 1.0768712412250014, + "7434": 0.715062205123465, + "7435": 0.6795405760702604, + "7436": 0.9925101880901952, + "7437": -0.0, + "7438": 1.3738965308034583, + "7439": -0.0, + "7440": -0.0, + "7441": 0.917465597216738, + "7442": 1.3019854964080415, + "7443": 1.0417291474776855, + "7444": 1.3584984966411302, + "7445": 0.02048848014765966, + "7446": 0.31353417841768844, + "7447": 1.4807694992914398, + "7448": 0.16732108926843797, + "7449": 0.015474984440366435, + "7450": 0.048110116403873186, + "7451": 0.021959199473374068, + "7452": 0.004578741990197366, + "7453": 1.1387277661319468, + "7454": 1.0227094403010097, + "7455": 1.3636931512340205, + "7456": 1.5744990415929232, + "7457": 1.3263400561892886, + "7458": 0.034010979261182614, + "7459": 1.5748908902350733, + "7460": 0.009157302241989688, + "7461": 0.41524745688005504, + "7462": 0.9849109438823926, + "7463": 0.06354409196876044, + "7464": 0.2374440821854039, + "7465": 0.9947926283702018, + "7466": 0.047865935943345574, + "7467": 1.1839674915027383, + "7468": 1.0370234189511547, + "7469": 1.0099424173960028, + "7470": 0.21439309330640566, + "7471": 1.4832269336593409, + "7472": 0.9612736143599352, + "7473": -0.0, + "7474": 1.152818696673193, + "7475": 1.8346251462526308, + "7476": 1.0003879378078024, + "7477": 1.1759555905546344, + "7478": 0.06378756445407255, + "7479": 1.0066732542542958, + "7480": 1.5884211918497342, + "7481": 0.012055818968116187, + "7482": 0.11184583014923546, + "7483": 1.1510040590266954, + "7484": 0.009163078279483691, + "7485": -0.0, + "7486": 1.6616506683180177, + "7487": -0.0, + "7488": 0.020065420985612592, + "7489": 0.9361735242476852, + "7490": 0.020507577412401133, + "7491": 0.060866508990712824, + "7492": 1.060100766082516, + "7493": 1.0542077497228122, + "7494": 1.0320751917156237, + "7495": 1.9648346486880155, + "7496": 0.7664804462587782, + "7497": 0.012055818968116187, + "7498": 1.2173264140422873, + "7499": 0.00845285100675642, + "7500": 0.00845285100675642, + "7501": 0.26049201765045565, + "7502": -0.0, + "7503": -0.0, + "7504": 0.8106180927268327, + "7505": 0.05516646837480638, + "7506": -0.0, + "7507": 1.2327512962580085, + "7508": 0.9528497807081957, + "7509": 0.00845285100675642, + "7510": 1.8829955083066303, + "7511": -0.0, + "7512": -0.0, + "7513": 1.2508091647552575, + "7514": 0.3870141684244307, + "7515": 0.004583075654056219, + "7516": 1.259912043305153, + "7517": 0.9076473080991808, + "7518": 0.01878935015454486, + "7519": 1.5098920050881959, + "7520": 0.45935014259326684, + "7521": 0.5406903557830202, + "7522": 0.9699043363645861, + "7523": 0.015489291306084138, + "7524": 0.028133747189739006, + "7525": 1.4337622441819748, + "7526": 0.013038200945578067, + "7527": 0.008455489608355543, + "7528": 1.183470783805668, + "7529": 0.04707508080564429, + "7530": 0.023371514530472964, + "7531": 0.07197678673612029, + "7532": 0.015489291306084138, + "7533": -0.0, + "7534": 0.44802706783259294, + "7535": 0.7307996709635389, + "7536": 0.14489961753310665, + "7537": 0.9994160811651456, + "7538": 0.7437631553079528, + "7539": 0.9831089540276912, + "7540": 1.4955449064446515, + "7541": 1.0779400255658063, + "7542": -0.0, + "7543": 0.9861994429001396, + "7544": -0.0, + "7545": -0.0, + "7546": 0.8932597367575703, + "7547": -0.0, + "7548": -0.0, + "7549": -0.0, + "7550": 0.46581225237402313, + "7551": 1.3140163984590036, + "7552": 1.1032391639715313, + "7553": -0.0, + "7554": -0.0, + "7555": 1.788986992570475, + "7556": 0.19139345183208614, + "7557": 0.008481971938907325, + "7558": 1.1531616666109383, + "7559": 0.46388942535101985, + "7560": -0.0, + "7561": 0.8990199991783977, + "7562": 0.20097203569007444, + "7563": 0.009194984416625685, + "7564": 0.7919438055543787, + "7565": -0.0, + "7566": 0.33222458677262523, + "7567": 0.3358875468010895, + "7568": 0.009197896604363374, + "7569": 0.013083302742188033, + "7570": 1.8412921064867294, + "7571": 0.004599040081207897, + "7572": 0.004599040081207897, + "7573": 1.6117054957459838, + "7574": 0.9064525607759267, + "7575": 0.6570111040445729, + "7576": 1.0155787733647683, + "7577": 1.140134884755872, + "7578": 0.34110993349110114, + "7579": 1.07870944457375, + "7580": 0.16970233321605677, + "7581": 1.46176681957782, + "7582": 0.9887288965885603, + "7583": 0.6388079386279888, + "7584": 1.5973340045887203, + "7585": 1.7710281304167783, + "7586": 0.02357523827439642, + "7587": 0.012165180916143839, + "7588": 0.8859993415732705, + "7589": 0.04182103896910681, + "7590": -0.0, + "7591": 1.1592782227730876, + "7592": 1.150434161782327, + "7593": 1.5048269821777622, + "7594": 1.3465289384557109, + "7595": 0.9994645335770967, + "7596": 0.5691049789957631, + "7597": 0.9296067728151743, + "7598": 1.0722686581497298, + "7599": 0.004600497214030638, + "7600": 1.459673469069792, + "7601": 0.0534091710680242, + "7602": 0.06189285308495118, + "7603": 1.5893449069522125, + "7604": 1.2898387761675851, + "7605": 1.2571756955707134, + "7606": 1.5192398087332877, + "7607": 0.40452642510700443, + "7608": 0.10415832719635237, + "7609": 0.8992728061793136, + "7610": 1.2557144443300963, + "7611": 0.4347596984491036, + "7612": 1.0853257902976594, + "7613": 1.353149075256792, + "7614": 0.9285124407113654, + "7615": 1.5063219951324902, + "7616": 1.3044792478768987, + "7617": 0.7325080744281284, + "7618": 1.70310132820384, + "7619": 1.2193945976456055, + "7620": 0.8163836680050907, + "7621": 0.37914719961306814, + "7622": 1.6714364721831934, + "7623": 1.5019568357300954, + "7624": 0.3367595238065283, + "7625": 1.865560491472264, + "7626": 0.8665907893810376, + "7627": 0.7849227527851084, + "7628": 1.320300442677584, + "7629": 0.9936895103059984, + "7630": 1.0, + "7631": 1.1567796494470395, + "7632": 0.7219280948873623, + "7633": -0.0, + "7634": -0.0, + "7635": -0.0, + "7636": 0.8112781244591328, + "7637": -0.0, + "7638": 0.9864267287308424, + "7639": 0.9864267287308424, + "7640": 0.5032583347756457, + "7641": 0.8917965798240356, + "7642": 1.5149176313452744, + "7643": 1.1832943419688253, + "7644": 1.3988384859989353, + "7645": 1.5328166613213234, + "7646": 1.0716300384478554, + "7647": 1.532867193053479, + "7648": 0.8453697378510509, + "7649": 1.2647878844638416, + "7650": 1.4091847305118705, + "7651": 1.2827423633249853, + "7652": 1.2935682739826975, + "7653": 1.3299527682531218, + "7654": 1.7349445033030757, + "7655": 1.3163925750231413, + "7656": 1.0154111000790154, + "7657": 1.3350764619886648, + "7658": 1.354099874910256, + "7659": 1.0082194729583662, + "7660": 1.0795641136202625, + "7661": 1.4593137944762267, + "7662": 1.3060931985046496, + "7663": 1.4165804522248084, + "7664": 1.6410218897821816, + "7665": 0.934150674004094, + "7666": 0.8257302073078769, + "7667": 0.11648115434260795, + "7668": 0.9873107540373612, + "7669": 1.5711866822114682, + "7670": 0.9133598930481037, + "7671": 1.4958958960358704, + "7672": 1.2481445810265563, + "7673": 1.0164998347852112, + "7674": 0.3746933295225752, + "7675": 1.7426516851237923, + "7676": 0.9985532860835362, + "7677": 1.4614828307119232, + "7678": 0.9886994082884974, + "7679": 0.20062232431271465, + "7680": 0.7380636700495734, + "7681": 1.8522273981032822, + "7682": 1.1742784488650115, + "7683": 0.9971803988942642, + "7684": 1.4351795210580987, + "7685": 1.4480191162672789, + "7686": 0.9744894033980523, + "7687": 0.5547781633412736, + "7688": 1.3184409397485066, + "7689": 0.11911602665564835, + "7690": 1.3643186585921567, + "7691": 0.6373874992221911, + "7692": 1.358584608060248, + "7693": 1.574578375854349, + "7694": 0.11911602665564835, + "7695": 0.9629004147713269, + "7696": 1.0229584350810181, + "7697": 0.8453509366224364, + "7698": 1.0978693276969014, + "7699": 1.4476230632499947, + "7700": 1.162600075334423, + "7701": 0.8336554776232066, + "7702": 1.114389644766241, + "7703": 1.1341708958204642, + "7704": 1.2186649320622038, + "7705": 1.06401445169395, + "7706": 1.106614296002443, + "7707": 1.0814725554017544, + "7708": -0.0, + "7709": -0.0, + "7710": -0.0, + "7711": -0.0, + "7712": -0.0, + "7713": -0.0, + "7714": -0.0, + "7715": -0.0, + "7716": -0.0, + "7717": -0.0, + "7718": -0.0, + "7719": -0.0, + "7720": -0.0, + "7721": -0.0, + "7722": 0.9907762394416036, + "7723": 1.3415350210835428, + "7724": 0.7002151568963129, + "7725": 1.745322304867906, + "7726": 1.2246429998618815, + "7727": 1.4569004214310655, + "7728": 0.5438815920675351, + "7729": 0.9440486207423772, + "7730": 1.67862674778869, + "7731": 1.2317455063046914, + "7732": 1.258994000540102, + "7733": 1.461880647526871, + "7734": 1.2315631843299037, + "7735": 1.2629849930055401, + "7736": 1.6269006027260215, + "7737": 1.5384981664540252, + "7738": 1.6453322988019776, + "7739": 1.109602787408417, + "7740": 1.8369427303059247, + "7741": 0.3255470088587065, + "7742": 1.8366016349225147, + "7743": 1.552113654745584, + "7744": 1.4989496083119855, + "7745": 0.6845526500589869, + "7746": 0.25164107326284196, + "7747": 0.6464645941713338, + "7748": 0.3097301614772584, + "7749": 0.6358500514675277, + "7750": 1.2648776699892401, + "7751": 0.0618061484555026, + "7752": 1.2394436430550078, + "7753": 0.23963491615862131, + "7754": 0.4458743865213677, + "7755": 1.034390457674379, + "7756": 0.6397981267443213, + "7757": 0.24096783080307266, + "7758": 0.04893139830501121, + "7759": 0.5463369079041014, + "7760": 0.3133801388285322, + "7761": 0.1201543850557974, + "7762": 0.6688407610794379, + "7763": 0.12068101401352381, + "7764": 0.6913244820302479, + "7765": 0.6297846895806012, + "7766": 0.5122502440025585, + "7767": 0.6360046524926639, + "7768": 0.72890023881931, + "7769": 0.3045866885214023, + "7770": 0.5590194204458002, + "7771": 0.5806583562469234, + "7772": 1.1250289133954599, + "7773": 1.100170279966889, + "7774": 0.8025500079950406, + "7775": 0.1665310486141434, + "7776": 0.41830442390519906, + "7777": 0.6270771068791311, + "7778": 0.25634477409913614, + "7779": 0.9941270839794604, + "7780": 1.0650457182780924, + "7781": 0.31149788138407564, + "7782": 0.748425270123567, + "7783": 1.2245710645556247, + "7784": 1.2166631840971036, + "7785": 0.27955608909393564, + "7786": 0.7023208177326152, + "7787": 1.0316023568876864, + "7788": 0.5235511429746622, + "7789": -0.0, + "7790": -0.0, + "7791": 0.7583727042781527, + "7792": 0.5053130155778526, + "7793": 0.6626907214237061, + "7794": 1.6789881026297881, + "7795": 0.5691807408296377, + "7796": 0.8588485101051444, + "7797": 1.1707214780842574, + "7798": 0.04051853381938455, + "7799": 0.3185964941950513, + "7800": 1.0747842634004743, + "7801": 0.5437792253393867, + "7802": 1.3414744763430457, + "7803": 1.7162963371958075, + "7804": 1.212590899201078, + "7805": 1.1760888539895389, + "7806": 0.7014908774237281, + "7807": 0.8725856928890454, + "7808": 1.4211391956476622, + "7809": 0.5660655071899997, + "7810": 0.9589691120013253, + "7811": 1.352107349537383, + "7812": 0.8051655276552148, + "7813": 1.1927906891560254, + "7814": 1.296120629053753, + "7815": 1.2623203357267054, + "7816": 1.3100629622665483, + "7817": 1.3514811053470153, + "7818": 1.1857311630523741, + "7819": 1.1355312525427521, + "7820": 1.0873222913854004, + "7821": 1.3769583243710928, + "7822": 0.2302296652817071, + "7823": 1.3497091108318289, + "7824": 1.467866819393175, + "7825": 1.023992765459927, + "7826": 1.25565950056364, + "7827": 1.606407660396153, + "7828": 1.1037871971663882, + "7829": 1.2535579710864253, + "7830": 0.7383131421043028, + "7831": 0.6751857207910482, + "7832": 1.354570743265461, + "7833": 0.49867513632043436, + "7834": -0.0, + "7835": 1.6341382401339344, + "7836": 1.3192963821488144, + "7837": 0.7219280948873623, + "7838": 1.4700219695033856, + "7839": 1.3995812306460644, + "7840": 1.8554347331118184, + "7841": 1.8412317364520534, + "7842": 0.3900770961401662, + "7843": 1.1840512883060508, + "7844": 1.1198657701891266, + "7845": 1.3463507455944297, + "7846": 1.6967326578246522, + "7847": 1.6089845666365505, + "7848": 0.5340284252038205, + "7849": 0.29474572661300646, + "7850": 0.5570108762787809, + "7851": 1.0358891258267018, + "7852": -0.0, + "7853": -0.0, + "7854": -0.0, + "7855": 0.7219280948873623, + "7856": -0.0, + "7857": 0.7219280948873623, + "7858": -0.0, + "7859": 1.3787834934861753, + "7860": 0.9852281360342515, + "7861": 0.5916727785823275, + "7862": 1.4488156357251847, + "7863": 0.46712322608557433, + "7864": 1.0842311087751098, + "7865": 0.7323690358209083, + "7866": 1.4201941071286852, + "7867": 1.7662440555581607, + "7868": 0.21279957628049675, + "7869": 0.6073487841010324, + "7870": 1.1332362423419267, + "7871": 0.2661774675255742, + "7872": 0.07372691234324169, + "7873": 0.3080915696628336, + "7874": 0.06612843922097372, + "7875": 0.09227724774457388, + "7876": 0.7894099893277893, + "7877": 0.1292373836015741, + "7878": 0.5403254705807599, + "7879": 0.7549105540754462, + "7880": 1.6958686896798176, + "7881": 0.7971730642237531, + "7882": 1.169063961987944, + "7883": 0.7819995037700803, + "7884": 0.23385690028808157, + "7885": 1.036147282008177, + "7886": 1.4075164704966072, + "7887": 1.2648731381595828, + "7888": 0.974294514437746, + "7889": 1.2559594609448366, + "7890": 0.9313744323278932, + "7891": 1.072781787871485, + "7892": 0.848730448799228, + "7893": 0.4442288496573417, + "7894": 1.2630223044333182, + "7895": 1.1240846205177544, + "7896": 1.0348144511452844, + "7897": 1.7152083393737323, + "7898": 1.9947203716743833, + "7899": 1.0265288791599751, + "7900": 1.678458787885902, + "7901": 1.6438074897702524, + "7902": -0.0, + "7903": 1.2027708135442967, + "7904": 1.3200756053571714, + "7905": 1.3522763720625126, + "7906": 1.1923826889753988, + "7907": 0.8927136406996784, + "7908": 0.7374210847936837, + "7909": 0.6353853525554944, + "7910": 0.0704752154112642, + "7911": 0.35670863649921386, + "7912": 1.033618990635859, + "7913": 0.7345852827407184, + "7914": -0.0, + "7915": 0.6136190195993708, + "7916": 0.32984607020714635, + "7917": 0.1936428046838986, + "7918": 1.2138094649951863, + "7919": 0.5969995167604552, + "7920": 1.3099269701483607, + "7921": 1.4536880283508182, + "7922": 0.991179663264827, + "7923": 0.9595212772858948, + "7924": 0.8951613100546125, + "7925": 1.4565296857642875, + "7926": 0.24322619154827377, + "7927": 0.3291270166429644, + "7928": 1.0487789210104739, + "7929": 1.1546234840904905, + "7930": 1.663180732741205, + "7931": 0.7702929154783156, + "7932": -0.0, + "7933": -0.0, + "7934": -0.0, + "7935": -0.0, + "7936": -0.0, + "7937": 1.1607470194111051, + "7938": 1.5094001979862002, + "7939": 0.25369599665460885, + "7940": 0.20839316603327374, + "7941": 0.7542648952850352, + "7942": 0.9230334949276048, + "7943": 1.174919171086252, + "7944": 0.7651596233943084, + "7945": 1.2705596307935, + "7946": 0.9504560799269582, + "7947": 0.863120568566631, + "7948": 0.5032583347756457, + "7949": -0.0, + "7950": 1.6022260820279906, + "7951": 0.05562236581831018, + "7952": 0.19184859962959394, + "7953": 1.043184138334427, + "7954": 0.3137494687318072, + "7955": 0.3543514103782678, + "7956": 1.5422391633947057, + "7957": 1.1763599078882012, + "7958": 1.261561926479544, + "7959": 1.2116892067334697, + "7960": 0.4117020614856134, + "7961": 0.5377571454532782, + "7962": 1.183154577971975, + "7963": 0.9947907013732433, + "7964": 0.1628798466292286, + "7965": 1.0652304020219943, + "7966": 0.8391464087407358, + "7967": 1.2830615306771649, + "7968": 1.154894383591454, + "7969": 0.659216821036683, + "7970": 0.6394526135329363, + "7971": 1.2836553184153965, + "7972": 0.6618199634008222, + "7973": 1.2655683742752013, + "7974": 1.5349018817262434, + "7975": 0.8918657259440417, + "7976": 0.7489998349960705, + "7977": 0.8485550951379163, + "7978": 0.42183108527383595, + "7979": 0.7127132755397999, + "7980": 1.3977162886419792, + "7981": 0.580601565469134, + "7982": 0.06486635476598611, + "7983": 1.1043318303673633, + "7984": 1.452829960604727, + "7985": 1.141619837336532, + "7986": 1.0289188692488063, + "7987": 1.4036214903091213, + "7988": 0.6609478348711755, + "7989": 1.2917837133594565, + "7990": 0.8842600752639259, + "7991": 0.7989048001766029, + "7992": 1.2383898880831992, + "7993": 0.1883670017024511, + "7994": 0.12270838294483379, + "7995": 1.15959028157919, + "7996": 0.8966105971739934, + "7997": -0.0, + "7998": -0.0, + "7999": 1.9298150617785248, + "8000": -0.0, + "8001": 0.48048674247051454, + "8002": 0.6252720834940863, + "8003": 0.7703551323095718, + "8004": 0.9355994118948138, + "8005": 0.5723314157864625, + "8006": 0.34570987154059496, + "8007": 0.7746264317993269, + "8008": 0.8709775428534143, + "8009": 0.6788900193367995, + "8010": 0.8265832445563382, + "8011": 0.8434471233240948, + "8012": 0.6548861496960596, + "8013": 0.3518977643721337, + "8014": 0.34132180940120105, + "8015": 0.7962884661254425, + "8016": 0.817395868049671, + "8017": 0.8141319211356408, + "8018": 1.7262739116134003, + "8019": 1.0189372106173824, + "8020": 0.14866866557836153, + "8021": 0.9230112374110424, + "8022": 0.5191028383360083, + "8023": 1.5100165716042535, + "8024": 0.8945027878895748, + "8025": 0.510743568618467, + "8026": 0.4983951842896808, + "8027": 0.8429864593765829, + "8028": 0.6145241976765577, + "8029": 0.16805357945752608, + "8030": 0.966375539848894, + "8031": 0.23124222575509482, + "8032": 0.9377778495147466, + "8033": 1.3244582850319164, + "8034": 1.5029619421285956, + "8035": 1.0837723078347015, + "8036": 0.2821067249580604, + "8037": 1.392062991341961, + "8038": 0.8052714231522973, + "8039": 1.4336796152862363, + "8040": 0.793804855496666, + "8041": 0.7776008109308759, + "8042": 0.8296069064481517, + "8043": 0.12565805017256743, + "8044": 0.2508796910719543, + "8045": 0.6537690305906849, + "8046": 0.46549952759606694, + "8047": -0.0, + "8048": 1.089307752152708, + "8049": 0.362051251733998, + "8050": 0.654715427677645, + "8051": 1.4621586865013159, + "8052": 1.3909080457555154, + "8053": 0.08747705440766411, + "8054": 1.2099016251359047, + "8055": 1.0926254053599913, + "8056": 1.9279240605006414, + "8057": 1.2515082816124234, + "8058": 1.5102634864299824, + "8059": 0.06654124061497932, + "8060": 1.5523004428078255, + "8061": 1.2332402565070937, + "8062": 0.6626825094205864, + "8063": 1.3051738775878607, + "8064": 1.433677282158168, + "8065": 0.8088983834276842, + "8066": 0.6722948170756379, + "8067": 0.3227569588973982, + "8068": 0.5225593745369408, + "8069": 0.5916727785823275, + "8070": 0.5916727785823275, + "8071": -0.0, + "8072": 0.9463729359854419, + "8073": -0.0, + "8074": -0.0, + "8075": -0.0, + "8076": -0.0, + "8077": -0.0, + "8078": -0.0, + "8079": -0.0, + "8080": -0.0, + "8081": 0.37123232664087563, + "8082": -0.0, + "8083": -0.0, + "8084": 0.5916727785823275, + "8085": 1.287665510005515, + "8086": 0.806697488231004, + "8087": 0.23772107576081675, + "8088": 0.4262286569981449, + "8089": 0.5435644431995964, + "8090": 0.9402859586706311, + "8091": -0.0, + "8092": -0.0, + "8093": -0.0, + "8094": -0.0, + "8095": -0.0, + "8096": 0.5435644431995964, + "8097": 1.370862465083061, + "8098": 0.4262286569981449, + "8099": 0.9737837298712214, + "8100": 1.0994839817876882, + "8101": 1.2364405016961446, + "8102": 1.1968143142921444, + "8103": 0.3142625117912159, + "8104": -0.0, + "8105": 1.5881115199431377, + "8106": 0.22597529437138766, + "8107": -0.0, + "8108": 0.6098002879593584, + "8109": 0.07628894356124766, + "8110": 0.040015015916232806, + "8111": 0.9742570473271296, + "8112": 0.8667980424839244, + "8113": 0.6061201247892194, + "8114": 1.4659768419950545, + "8115": 0.9908306162799201, + "8116": 1.00839129577679, + "8117": 1.6107261077180914, + "8118": 0.008530085792975673, + "8119": -0.0, + "8120": -0.0, + "8121": 0.10620323467590663, + "8122": -0.0, + "8123": 1.3134139172288612, + "8124": 1.2758653834592648, + "8125": 0.8604008240166023, + "8126": 1.6014725350021561, + "8127": 0.9842841266408344, + "8128": 0.6240284155381721, + "8129": 1.3520398545241048, + "8130": -0.0, + "8131": -0.0, + "8132": 0.6054213644743796, + "8133": 0.04485231481318198, + "8134": 0.8457737686169369, + "8135": 0.9454943903625899, + "8136": 1.0552346565543016, + "8137": 0.9877367379629967, + "8138": 1.4362405425441374, + "8139": 0.31333474462834693, + "8140": 1.1245221252550632, + "8141": 0.9072520977828016, + "8142": 0.8378650898988663, + "8143": -0.0, + "8144": 0.8966463300174301, + "8145": 1.437094915936709, + "8146": 1.4505315366747287, + "8147": 1.078699396404911, + "8148": 0.008565196042291898, + "8149": -0.0, + "8150": 1.469983927950117, + "8151": 0.4142448618016273, + "8152": 0.8636601573134408, + "8153": 0.5145610717515923, + "8154": 0.11709030000178848, + "8155": 0.013208002936794399, + "8156": 0.04128839091708565, + "8157": 1.1839474164747221, + "8158": -0.0, + "8159": -0.0, + "8160": -0.0, + "8161": 1.1795268091457707, + "8162": 1.2074290705623136, + "8163": 0.008567909521625665, + "8164": 0.012226426156040878, + "8165": 1.5664830322534893, + "8166": 0.4600214084694302, + "8167": 0.043044294134830186, + "8168": 1.627626641249426, + "8169": 0.6213173894969253, + "8170": 1.0318078399004187, + "8171": 1.5453150352514349, + "8172": 0.9191299180502139, + "8173": 0.4757088739345524, + "8174": 1.5100861471243978, + "8175": 0.0157024096049304, + "8176": 0.9687127556467464, + "8177": 1.1982637810358006, + "8178": 1.2269579164245519, + "8179": 0.03552535223432169, + "8180": 1.8665644654919438, + "8181": 0.40218962982778655, + "8182": 0.6640777465782195, + "8183": 0.4074572290560925, + "8184": 0.042039379745009764, + "8185": 0.008551655914870919, + "8186": 0.5107999229858765, + "8187": 0.09810355993710268, + "8188": 0.004637244862985328, + "8189": 1.4423051743984672, + "8190": -0.0, + "8191": 0.00463576306515032, + "8192": 0.6527532776327866, + "8193": 0.00463576306515032, + "8194": 0.017816583885239483, + "8195": 1.1208476616081255, + "8196": 0.06158868491487543, + "8197": 0.013182862045785212, + "8198": 1.4494065146683295, + "8199": 0.0046342822661353915, + "8200": 0.02536507240725206, + "8201": 0.8340952543137186, + "8202": 0.12514246996502662, + "8203": 0.7924136173970304, + "8204": 0.9634374810089446, + "8205": 1.053104735399718, + "8206": 0.06495076460551263, + "8207": 1.4077532474439323, + "8208": 0.008554360310675357, + "8209": 0.004637244862985328, + "8210": 1.0182553567509394, + "8211": -0.0, + "8212": -0.0, + "8213": -0.0, + "8214": 0.9711607366448675, + "8215": 1.0049250091396655, + "8216": 1.1277881820274125, + "8217": 1.366652504650772, + "8218": -0.0, + "8219": -0.0, + "8220": -0.0, + "8221": -0.0, + "8222": -0.0, + "8223": -0.0, + "8224": -0.0, + "8225": -0.0, + "8226": -0.0, + "8227": -0.0, + "8228": -0.0, + "8229": -0.0, + "8230": -0.0, + "8231": -0.0, + "8232": -0.0, + "8233": -0.0, + "8234": -0.0, + "8235": -0.0, + "8236": -0.0, + "8237": -0.0, + "8238": -0.0, + "8239": -0.0, + "8240": -0.0, + "8241": -0.0, + "8242": -0.0, + "8243": -0.0, + "8244": -0.0, + "8245": -0.0, + "8246": -0.0, + "8247": -0.0, + "8248": 0.9643957455405162, + "8249": 1.056309285485217, + "8250": 0.20106829445254232, + "8251": 0.08837479994042308, + "8252": 1.1302046739465406, + "8253": 0.30640989874302704, + "8254": -0.0, + "8255": -0.0, + "8256": 0.9182958340544896, + "8257": 0.0085570665194563, + "8258": 0.9466079697249944, + "8259": -0.0, + "8260": 0.009274302715282987, + "8261": 0.047602224123941723, + "8262": -0.0, + "8263": -0.0, + "8264": 0.5898306469739714, + "8265": 0.0085570665194563, + "8266": -0.0, + "8267": 0.45363083320671804, + "8268": 0.025398479958508142, + "8269": 0.021493133495494112, + "8270": 1.0688259145715078, + "8271": 0.0364514371250359, + "8272": 0.013237462519189646, + "8273": 1.5465291609101173, + "8274": 0.02766143649824658, + "8275": 0.06437018196270168, + "8276": 0.5558792468003317, + "8277": 0.40933169291855176, + "8278": 1.0906905259098123, + "8279": 1.5724479639007696, + "8280": 0.7772337249963027, + "8281": -0.0, + "8282": 0.02158202120437265, + "8283": 0.004662589249834307, + "8284": -0.0, + "8285": 0.013262824491163097, + "8286": 0.06190875909542275, + "8287": 0.015756669066608643, + "8288": -0.0, + "8289": 0.01327130134855139, + "8290": 0.004667092169493135, + "8291": -0.0, + "8292": 0.05076834997459873, + "8293": 0.047865059450078365, + "8294": 0.03751846571820617, + "8295": 0.004677634758483616, + "8296": 0.11894649968139397, + "8297": 0.025632031886222012, + "8298": 1.3340870667348792, + "8299": 1.4597772715833475, + "8300": 1.0054793208638007, + "8301": 0.9983080634376925, + "8302": 0.4994181472747619, + "8303": 0.5901415154481284, + "8304": 1.2025503264069355, + "8305": 0.004833928275218758, + "8306": -0.0, + "8307": -0.0, + "8308": -0.0, + "8309": -0.0, + "8310": -0.0, + "8311": -0.0, + "8312": -0.0, + "8313": -0.0, + "8314": -0.0, + "8315": -0.0, + "8316": -0.0, + "8317": -0.0, + "8318": 0.004833928275218758, + "8319": 0.9110929476662634, + "8320": -0.0, + "8321": -0.0, + "8322": 0.42789070793377815, + "8323": 0.012715908756356007, + "8324": 0.004837166789587231, + "8325": 1.419798208342657, + "8326": 0.050367611921501604, + "8327": 0.752635974190994, + "8328": 0.383264068855487, + "8329": 0.017587350153039503, + "8330": 0.047869876461643354, + "8331": 0.7341113067452715, + "8332": 0.008954743770415313, + "8333": 0.008954743770415313, + "8334": 0.19227648815117426, + "8335": -0.0, + "8336": 0.004863240732293233, + "8337": 1.4961683647537587, + "8338": 0.038798958434625636, + "8339": 0.013852687402914033, + "8340": 1.14814196345332, + "8341": 0.0097459811244106, + "8342": 0.012825668271399566, + "8343": 0.6480993718871094, + "8344": 0.02290209500761711, + "8345": -0.0, + "8346": 1.332931953558908, + "8347": 0.13038913648215483, + "8348": 0.01393681955487305, + "8349": 0.4551799170310432, + "8350": 1.3978025618733119, + "8351": 0.026801317464391326, + "8352": 1.3449057150440258, + "8353": 0.506685057423652, + "8354": 0.1101285012949897, + "8355": 1.1150352602579658, + "8356": 0.626970032792181, + "8357": 1.3602274253062447, + "8358": 0.538652890017912, + "8359": 0.9564893642003509, + "8360": 0.11965926653395093, + "8361": 0.9202778320705894, + "8362": 0.018933489616486218, + "8363": 0.02508954804852042, + "8364": 0.050494068149558036, + "8365": 0.029304060329844103, + "8366": 0.014055480999911529, + "8367": 0.018242990312482582, + "8368": 0.004951771613568819, + "8369": -0.0, + "8370": 0.026733388483428572, + "8371": 0.41380851773345323, + "8372": 0.9474805244209319, + "8373": -0.0, + "8374": -0.0, + "8375": -0.0, + "8376": -0.0, + "8377": -0.0, + "8378": -0.0, + "8379": -0.0, + "8380": -0.0, + "8381": 1.2971559936194823, + "8382": 0.4643803255094564, + "8383": 0.9263846492025929, + "8384": 1.2024546921238846, + "8385": 0.014439861719748424, + "8386": 0.12100948855235784, + "8387": 0.9979604884303568, + "8388": 0.23580598341609715, + "8389": 0.01995713101896311, + "8390": 0.019747093869270156, + "8391": -0.0, + "8392": -0.0, + "8393": -0.0, + "8394": -0.0, + "8395": -0.0, + "8396": -0.0, + "8397": -0.0, + "8398": -0.0, + "8399": -0.0, + "8400": -0.0, + "8401": -0.0, + "8402": -0.0, + "8403": 0.5455521642684206, + "8404": 0.5353448663451935, + "8405": 0.047527484527077266, + "8406": 0.05521439939368608, + "8407": 0.4917255431503482, + "8408": 0.8380011110831694, + "8409": 1.9090931493604488, + "8410": 1.6001585149630273, + "8411": 1.6307052603042886, + "8412": 1.2717267078484755, + "8413": 0.7345299214394703, + "8414": 0.9895875212220556, + "8415": 1.491013870758994, + "8416": -0.0, + "8417": 1.0, + "8418": -0.0, + "8419": 1.5, + "8420": 0.9864267287308424, + "8421": 0.6998578570269279, + "8422": 0.222284830685688, + "8423": 0.4182732481458324, + "8424": -0.0, + "8425": 0.5883061804777816, + "8426": -0.0, + "8427": 0.8583460861430732, + "8428": 1.2291185229810082, + "8429": 0.5936497954098108, + "8430": 1.0, + "8431": 0.8636318507133831, + "8432": 0.9266484326575899, + "8433": 1.2501578119775825, + "8434": 1.2894547342717448, + "8435": 0.7553629186830827, + "8436": 0.7527375143763262, + "8437": 0.5907239186406502, + "8438": 0.8453509366224364, + "8439": 0.5229784263810124, + "8440": 0.34074724938751827, + "8441": 0.5922467307218772, + "8442": 0.3193373865339728, + "8443": 0.15045116018085175, + "8444": 0.31599713297842463, + "8445": 0.18717625687320816, + "8446": 1.0802839112727312, + "8447": 0.3288767124731152, + "8448": 0.7376786121290546, + "8449": 0.5032583347756457, + "8450": 1.049886625190374, + "8451": 0.968270247409618, + "8452": -0.0, + "8453": 0.5032583347756457, + "8454": 1.4798778341007661, + "8455": 0.43696827843705677, + "8456": 0.5065002416504742, + "8457": 0.43884700530826626, + "8458": 0.8052832476438913, + "8459": 1.1614909623366438, + "8460": 0.5948226962034459, + "8461": 1.1403060797596762, + "8462": 1.0856355100346986, + "8463": 0.7262600383509772, + "8464": 0.41381685030363374, + "8465": 1.5219280948873621, + "8466": 1.5219280948873621, + "8467": -0.0, + "8468": 1.8011098356508795, + "8469": 1.0378420425063606, + "8470": -0.0, + "8471": 0.6335327596289275, + "8472": 0.5439153089158094, + "8473": 1.6504337624519494, + "8474": 1.7756862527266946, + "8475": 1.7830324774763082, + "8476": 1.585299059022446, + "8477": 0.5061570375747816, + "8478": 0.5373650172763919, + "8479": 1.461967410525103, + "8480": 0.908636931067476, + "8481": 1.0503492676887718, + "8482": 1.1241569353464977, + "8483": 0.4040802869267244, + "8484": 0.9397340592547586, + "8485": 1.2145601440500005, + "8486": 1.2620957762242075, + "8487": 1.7939007666059217, + "8488": 1.1799612533423922, + "8489": 0.15532554319208633, + "8490": 0.37796847556269747, + "8491": 1.5584726726097557, + "8492": 1.6242146286539796, + "8493": -0.0, + "8494": 0.8218739267747504, + "8495": 1.3824949407351106, + "8496": 1.0281620598443195, + "8497": 1.3478081891428118, + "8498": 0.5050274803544414, + "8499": 0.23378715411911635, + "8500": 0.5763189271177317, + "8501": 0.2580186686648155, + "8502": 1.1070802450783384, + "8503": 0.9914834207333328, + "8504": 0.28639695711595625, + "8505": 0.9800279340452717, + "8506": 1.3896047232839495, + "8507": 1.3748882886507032, + "8508": 0.9258205238406938, + "8509": -0.0, + "8510": -0.0, + "8511": 0.9182958340544896, + "8512": 1.2066152244629251, + "8513": 0.9595462996283736, + "8514": 0.29609914595148523, + "8515": 0.27815525417841463, + "8516": 0.07511101562002691, + "8517": 0.15502016606686336, + "8518": 0.187824449344689, + "8519": 0.6136055009132757, + "8520": 0.22545618568028283, + "8521": 0.22103673652165662 +} \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_gc.json b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_gc.json new file mode 100644 index 0000000..0aa1649 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_gc.json @@ -0,0 +1,569 @@ +{ + "0": 0.32, + "15": 0.53, + "30": 0.53, + "45": 0.37, + "60": 0.38, + "75": 0.37, + "90": 0.37, + "105": 0.39, + "120": 0.39, + "135": 0.39, + "150": 0.62, + "165": 0.73, + "180": 0.56, + "195": 0.45, + "210": 0.5, + "225": 0.65, + "240": 0.56, + "255": 0.44, + "270": 0.45, + "285": 0.71, + "300": 0.63, + "315": 0.61, + "330": 0.45, + "345": 0.4, + "360": 0.47, + "375": 0.54, + "390": 0.56, + "405": 0.55, + "420": 0.53, + "435": 0.55, + "450": 0.52, + "465": 0.49, + "480": 0.56, + "495": 0.48, + "510": 0.4, + "525": 0.44, + "540": 0.49, + "555": 0.56, + "570": 0.6, + "585": 0.55, + "600": 0.52, + "615": 0.51, + "630": 0.48, + "645": 0.53, + "660": 0.52, + "675": 0.46, + "690": 0.5, + "705": 0.53, + "720": 0.44, + "735": 0.43, + "750": 0.45, + "765": 0.48, + "780": 0.49, + "795": 0.47, + "810": 0.48, + "825": 0.43, + "840": 0.52, + "855": 0.49, + "870": 0.38, + "885": 0.42, + "900": 0.42, + "915": 0.42, + "930": 0.4, + "945": 0.38, + "960": 0.36, + "975": 0.44, + "990": 0.5, + "1005": 0.45, + "1020": 0.47, + "1035": 0.44, + "1050": 0.5, + "1065": 0.53, + "1080": 0.55, + "1095": 0.52, + "1110": 0.52, + "1125": 0.61, + "1140": 0.58, + "1155": 0.54, + "1170": 0.46, + "1185": 0.41, + "1200": 0.43, + "1215": 0.49, + "1230": 0.47, + "1245": 0.48, + "1260": 0.43, + "1275": 0.38, + "1290": 0.43, + "1305": 0.44, + "1320": 0.53, + "1335": 0.54, + "1350": 0.52, + "1365": 0.42, + "1380": 0.41, + "1395": 0.46, + "1410": 0.43, + "1425": 0.46, + "1440": 0.5, + "1455": 0.5, + "1470": 0.47, + "1485": 0.51, + "1500": 0.51, + "1515": 0.54, + "1530": 0.61, + "1545": 0.6, + "1560": 0.56, + "1575": 0.53, + "1590": 0.47, + "1605": 0.48, + "1620": 0.52, + "1635": 0.53, + "1650": 0.56, + "1665": 0.57, + "1680": 0.57, + "1695": 0.59, + "1710": 0.61, + "1725": 0.55, + "1740": 0.54, + "1755": 0.53, + "1770": 0.47, + "1785": 0.53, + "1800": 0.56, + "1815": 0.55, + "1830": 0.44, + "1845": 0.33, + "1860": 0.38, + "1875": 0.37, + "1890": 0.4, + "1905": 0.55, + "1920": 0.47, + "1935": 0.49, + "1950": 0.55, + "1965": 0.52, + "1980": 0.56, + "1995": 0.51, + "2010": 0.53, + "2025": 0.5, + "2040": 0.47, + "2055": 0.4, + "2070": 0.5, + "2085": 0.52, + "2100": 0.5, + "2115": 0.58, + "2130": 0.54, + "2145": 0.58, + "2160": 0.63, + "2175": 0.58, + "2190": 0.43, + "2205": 0.5, + "2220": 0.51, + "2235": 0.43, + "2250": 0.49, + "2265": 0.48, + "2280": 0.42, + "2295": 0.42, + "2310": 0.47, + "2325": 0.44, + "2340": 0.43, + "2355": 0.42, + "2370": 0.42, + "2385": 0.42, + "2400": 0.46, + "2415": 0.5, + "2430": 0.47, + "2445": 0.44, + "2460": 0.48, + "2475": 0.49, + "2490": 0.57, + "2505": 0.65, + "2520": 0.48, + "2535": 0.4, + "2550": 0.47, + "2565": 0.46, + "2580": 0.5, + "2595": 0.61, + "2610": 0.59, + "2625": 0.42, + "2640": 0.46, + "2655": 0.51, + "2670": 0.46, + "2685": 0.54, + "2700": 0.53, + "2715": 0.48, + "2730": 0.43, + "2745": 0.44, + "2760": 0.44, + "2775": 0.42, + "2790": 0.52, + "2805": 0.56, + "2820": 0.48, + "2835": 0.47, + "2850": 0.44, + "2865": 0.41, + "2880": 0.4, + "2895": 0.39, + "2910": 0.45, + "2925": 0.46, + "2940": 0.51, + "2955": 0.62, + "2970": 0.53, + "2985": 0.49, + "3000": 0.48, + "3015": 0.45, + "3030": 0.47, + "3045": 0.53, + "3060": 0.55, + "3075": 0.41, + "3090": 0.37, + "3105": 0.47, + "3120": 0.53, + "3135": 0.51, + "3150": 0.42, + "3165": 0.51, + "3180": 0.57, + "3195": 0.45, + "3210": 0.49, + "3225": 0.59, + "3240": 0.47, + "3255": 0.41, + "3270": 0.54, + "3285": 0.54, + "3300": 0.42, + "3315": 0.38, + "3330": 0.45, + "3345": 0.48, + "3360": 0.45, + "3375": 0.47, + "3390": 0.54, + "3405": 0.64, + "3420": 0.56, + "3435": 0.51, + "3450": 0.56, + "3465": 0.56, + "3480": 0.55, + "3495": 0.51, + "3510": 0.54, + "3525": 0.55, + "3540": 0.53, + "3555": 0.5, + "3570": 0.54, + "3585": 0.62, + "3600": 0.49, + "3615": 0.41, + "3630": 0.46, + "3645": 0.64, + "3660": 0.66, + "3675": 0.55, + "3690": 0.6, + "3705": 0.58, + "3720": 0.5, + "3735": 0.53, + "3750": 0.58, + "3765": 0.59, + "3780": 0.52, + "3795": 0.41, + "3810": 0.51, + "3825": 0.61, + "3840": 0.58, + "3855": 0.6, + "3870": 0.63, + "3885": 0.58, + "3900": 0.51, + "3915": 0.45, + "3930": 0.51, + "3945": 0.57, + "3960": 0.51, + "3975": 0.41, + "3990": 0.35, + "4005": 0.48, + "4020": 0.49, + "4035": 0.51, + "4050": 0.54, + "4065": 0.57, + "4080": 0.64, + "4095": 0.51, + "4110": 0.45, + "4125": 0.54, + "4140": 0.54, + "4155": 0.45, + "4170": 0.42, + "4185": 0.46, + "4200": 0.53, + "4215": 0.46, + "4230": 0.33, + "4245": 0.32, + "4260": 0.48, + "4275": 0.59, + "4290": 0.58, + "4305": 0.62, + "4320": 0.51, + "4335": 0.43, + "4350": 0.51, + "4365": 0.44, + "4380": 0.43, + "4395": 0.44, + "4410": 0.35, + "4425": 0.39, + "4440": 0.47, + "4455": 0.47, + "4470": 0.5, + "4485": 0.54, + "4500": 0.44, + "4515": 0.43, + "4530": 0.53, + "4545": 0.54, + "4560": 0.56, + "4575": 0.53, + "4590": 0.36, + "4605": 0.45, + "4620": 0.62, + "4635": 0.55, + "4650": 0.56, + "4665": 0.57, + "4680": 0.48, + "4695": 0.49, + "4710": 0.45, + "4725": 0.39, + "4740": 0.41, + "4755": 0.43, + "4770": 0.42, + "4785": 0.41, + "4800": 0.4, + "4815": 0.49, + "4830": 0.56, + "4845": 0.54, + "4860": 0.47, + "4875": 0.46, + "4890": 0.53, + "4905": 0.64, + "4920": 0.58, + "4935": 0.43, + "4950": 0.42, + "4965": 0.51, + "4980": 0.55, + "4995": 0.43, + "5010": 0.42, + "5025": 0.47, + "5040": 0.54, + "5055": 0.6, + "5070": 0.54, + "5085": 0.39, + "5100": 0.36, + "5115": 0.43, + "5130": 0.42, + "5145": 0.48, + "5160": 0.49, + "5175": 0.42, + "5190": 0.6, + "5205": 0.66, + "5220": 0.47, + "5235": 0.45, + "5250": 0.56, + "5265": 0.6, + "5280": 0.63, + "5295": 0.57, + "5310": 0.48, + "5325": 0.61, + "5340": 0.69, + "5355": 0.61, + "5370": 0.46, + "5385": 0.3, + "5400": 0.37, + "5415": 0.48, + "5430": 0.47, + "5445": 0.5, + "5460": 0.52, + "5475": 0.52, + "5490": 0.47, + "5505": 0.44, + "5520": 0.4, + "5535": 0.44, + "5550": 0.55, + "5565": 0.59, + "5580": 0.59, + "5595": 0.51, + "5610": 0.49, + "5625": 0.46, + "5640": 0.5, + "5655": 0.52, + "5670": 0.4, + "5685": 0.4, + "5700": 0.48, + "5715": 0.41, + "5730": 0.27, + "5745": 0.29, + "5760": 0.4, + "5775": 0.39, + "5790": 0.46, + "5805": 0.49, + "5820": 0.42, + "5835": 0.46, + "5850": 0.57, + "5865": 0.44, + "5880": 0.38, + "5895": 0.45, + "5910": 0.37, + "5925": 0.39, + "5940": 0.45, + "5955": 0.4, + "5970": 0.42, + "5985": 0.5, + "6000": 0.48, + "6015": 0.47, + "6030": 0.51, + "6045": 0.57, + "6060": 0.56, + "6075": 0.55, + "6090": 0.48, + "6105": 0.46, + "6120": 0.89, + "6135": 0.78, + "6150": 0.57, + "6165": 0.51, + "6180": 0.51, + "6195": 0.52, + "6210": 0.63, + "6225": 0.42, + "6240": 0.43, + "6255": 0.44, + "6270": 0.41, + "6285": 0.38, + "6300": 0.37, + "6315": 0.45, + "6330": 0.4, + "6345": 0.39, + "6360": 0.41, + "6375": 0.48, + "6390": 0.57, + "6405": 0.55, + "6420": 0.49, + "6435": 0.47, + "6450": 0.44, + "6465": 0.51, + "6480": 0.54, + "6495": 0.59, + "6510": 0.59, + "6525": 0.51, + "6540": 0.53, + "6555": 0.54, + "6570": 0.44, + "6585": 0.37, + "6600": 0.36, + "6615": 0.37, + "6630": 0.41, + "6645": 0.41, + "6660": 0.49, + "6675": 0.53, + "6690": 0.52, + "6705": 0.54, + "6720": 0.51, + "6735": 0.51, + "6750": 0.52, + "6765": 0.41, + "6780": 0.5, + "6795": 0.62, + "6810": 0.59, + "6825": 0.46, + "6840": 0.46, + "6855": 0.6, + "6870": 0.61, + "6885": 0.5, + "6900": 0.44, + "6915": 0.53, + "6930": 0.53, + "6945": 0.54, + "6960": 0.57, + "6975": 0.46, + "6990": 0.47, + "7005": 0.48, + "7020": 0.47, + "7035": 0.43, + "7050": 0.45, + "7065": 0.51, + "7080": 0.52, + "7095": 0.42, + "7110": 0.39, + "7125": 0.42, + "7140": 0.5, + "7155": 0.65, + "7170": 0.65, + "7185": 0.36, + "7200": 0.42, + "7215": 0.52, + "7230": 0.51, + "7245": 0.55, + "7260": 0.5, + "7275": 0.49, + "7290": 0.43, + "7305": 0.26, + "7320": 0.26, + "7335": 0.37, + "7350": 0.43, + "7365": 0.41, + "7380": 0.39, + "7395": 0.43, + "7410": 0.46, + "7425": 0.42, + "7440": 0.42, + "7455": 0.53, + "7470": 0.57, + "7485": 0.62, + "7500": 0.64, + "7515": 0.51, + "7530": 0.48, + "7545": 0.58, + "7560": 0.54, + "7575": 0.47, + "7590": 0.51, + "7605": 0.5, + "7620": 0.53, + "7635": 0.62, + "7650": 0.59, + "7665": 0.32, + "7680": 0.51, + "7695": 0.5, + "7710": 0.47, + "7725": 0.51, + "7740": 0.61, + "7755": 0.47, + "7770": 0.41, + "7785": 0.63, + "7800": 0.64, + "7815": 0.56, + "7830": 0.37, + "7845": 0.34, + "7860": 0.41, + "7875": 0.44, + "7890": 0.4, + "7905": 0.41, + "7920": 0.36, + "7935": 0.36, + "7950": 0.43, + "7965": 0.46, + "7980": 0.45, + "7995": 0.5, + "8010": 0.59, + "8025": 0.59, + "8040": 0.47, + "8055": 0.5, + "8070": 0.23, + "8085": 0.48, + "8100": 0.5, + "8115": 0.41, + "8130": 0.37, + "8145": 0.55, + "8160": 0.53, + "8175": 0.49, + "8190": 0.55, + "8205": 0.53, + "8220": 0.09, + "8235": 0.52, + "8250": 0.54, + "8265": 0.49, + "8280": 0.51, + "8295": 0.47, + "8310": 0.55, + "8325": 0.59, + "8340": 0.55, + "8355": 0.54, + "8370": 0.26, + "8385": 0.12, + "8400": 0.1, + "8415": 0.04, + "8430": 0.07, + "8445": 0.06, + "8460": 0.05, + "8475": 0.05, + "8490": 0.06 +} \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_occupancy.json b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_occupancy.json new file mode 100644 index 0000000..4371eff --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_occupancy.json @@ -0,0 +1,6310 @@ +{ + "0": [ + 0, + 0.2722457627118644 + ], + "1": [ + 1, + 0.29166666666666663 + ], + "2": [ + 2, + 0.34004237288135597 + ], + "3": [ + 3, + 0.3442796610169492 + ], + "4": [ + 4, + 0.5610875706214689 + ], + "5": [ + 5, + 0.5801553672316384 + ], + "6": [ + 6, + 0.5925141242937852 + ], + "7": [ + 7, + 0.6105225988700564 + ], + "8": [ + 8, + 0.6200564971751412 + ], + "9": [ + 9, + 0.625 + ], + "10": [ + 10, + 0.6606638418079096 + ], + "11": [ + 11, + 0.67090395480226 + ], + "12": [ + 12, + 0.0003531073446327859 + ], + "13": [ + 14, + 0.0003531073446327859 + ], + "14": [ + 15, + 0.6977401129943503 + ], + "15": [ + 16, + 0.7037429378531073 + ], + "16": [ + 17, + 0.7238700564971752 + ], + "17": [ + 18, + 0.7358757062146892 + ], + "18": [ + 19, + 0.7563559322033898 + ], + "19": [ + 20, + 0.759180790960452 + ], + "20": [ + 21, + 0.7627118644067796 + ], + "21": [ + 22, + 0.7680084745762712 + ], + "22": [ + 23, + 0.7718926553672316 + ], + "23": [ + 24, + 0.7856638418079096 + ], + "24": [ + 25, + 0.0003531073446327859 + ], + "25": [ + 26, + 0.797316384180791 + ], + "26": [ + 27, + 0.7990819209039548 + ], + "27": [ + 28, + 0.8022598870056497 + ], + "28": [ + 29, + 0.8036723163841808 + ], + "29": [ + 30, + 0.8050847457627118 + ], + "30": [ + 31, + 0.8082627118644068 + ], + "31": [ + 32, + 0.8121468926553672 + ], + "32": [ + 33, + 0.8128531073446328 + ], + "33": [ + 34, + 0.8132062146892656 + ], + "34": [ + 35, + 0.8142655367231638 + ], + "35": [ + 36, + 0.8153248587570622 + ], + "36": [ + 37, + 0.8156779661016949 + ], + "37": [ + 38, + 0.8177966101694916 + ], + "38": [ + 39, + 0.8990112994350282 + ], + "39": [ + 40, + 0.9074858757062148 + ], + "40": [ + 41, + 0.9096045197740112 + ], + "41": [ + 42, + 0.909957627118644 + ], + "42": [ + 43, + 0.909957627118644 + ], + "43": [ + 44, + 0.9113700564971752 + ], + "44": [ + 45, + 0.9134887005649718 + ], + "45": [ + 46, + 0.91454802259887 + ], + "46": [ + 47, + 0.9152542372881356 + ], + "47": [ + 48, + 0.9159604519774012 + ], + "48": [ + 49, + 0.916313559322034 + ], + "49": [ + 50, + 0.18361581920903958 + ], + "50": [ + 51, + 0.18361581920903958 + ], + "51": [ + 52, + 0.10981638418079098 + ], + "52": [ + 53, + 0.012358757062146841 + ], + "53": [ + 54, + 0.012358757062146841 + ], + "54": [ + 55, + 0.012711864406779627 + ], + "55": [ + 56, + 0.11016949152542377 + ], + "56": [ + 60, + 0.11016949152542377 + ], + "57": [ + 61, + 0.18432203389830504 + ], + "58": [ + 62, + 0.9184322033898304 + ], + "59": [ + 63, + 0.9194915254237288 + ], + "60": [ + 64, + 0.9201977401129944 + ], + "61": [ + 65, + 0.922316384180791 + ], + "62": [ + 66, + 0.923728813559322 + ], + "63": [ + 67, + 0.9247881355932204 + ], + "64": [ + 68, + 0.9272598870056498 + ], + "65": [ + 69, + 0.013064971751412413 + ], + "66": [ + 72, + 0.013064971751412413 + ], + "67": [ + 73, + 0.01412429378531077 + ], + "68": [ + 74, + 0.01412429378531077 + ], + "69": [ + 75, + 0.9286723163841808 + ], + "70": [ + 76, + 0.9297316384180792 + ], + "71": [ + 77, + 0.0003531073446327859 + ], + "72": [ + 80, + 0.0003531073446327859 + ], + "73": [ + 81, + 0.9311440677966102 + ], + "74": [ + 82, + 0.9325564971751412 + ], + "75": [ + 83, + 0.9353813559322034 + ], + "76": [ + 84, + 0.9364406779661016 + ], + "77": [ + 85, + 0.9367937853107344 + ], + "78": [ + 86, + 0.9367937853107344 + ], + "79": [ + 87, + 0.9371468926553672 + ], + "80": [ + 88, + 0.938912429378531 + ], + "81": [ + 89, + 0.9399717514124294 + ], + "82": [ + 90, + 0.940677966101695 + ], + "83": [ + 91, + 0.9410310734463276 + ], + "84": [ + 92, + 0.942090395480226 + ], + "85": [ + 93, + 0.9438559322033898 + ], + "86": [ + 94, + 0.9442090395480226 + ], + "87": [ + 95, + 0.9452683615819208 + ], + "88": [ + 96, + 0.9452683615819208 + ], + "89": [ + 97, + 0.9459745762711864 + ], + "90": [ + 99, + 0.9459745762711864 + ], + "91": [ + 100, + 0.9452683615819208 + ], + "92": [ + 101, + 0.9438559322033898 + ], + "93": [ + 102, + 0.9463276836158192 + ], + "94": [ + 103, + 0.9470338983050848 + ], + "95": [ + 104, + 0.948093220338983 + ], + "96": [ + 106, + 0.948093220338983 + ], + "97": [ + 107, + 0.9487994350282486 + ], + "98": [ + 108, + 0.9367937853107344 + ], + "99": [ + 109, + 0.10451977401129942 + ], + "100": [ + 112, + 0.10451977401129942 + ], + "101": [ + 113, + 0.1048728813559322 + ], + "102": [ + 115, + 0.1048728813559322 + ], + "103": [ + 116, + 0.0003531073446327859 + ], + "104": [ + 121, + 0.0003531073446327859 + ], + "105": [ + 122, + 0.1048728813559322 + ], + "106": [ + 123, + 0.1048728813559322 + ], + "107": [ + 124, + 0.9375 + ], + "108": [ + 125, + 0.9375 + ], + "109": [ + 126, + 0.9505649717514124 + ], + "110": [ + 127, + 0.9505649717514124 + ], + "111": [ + 128, + 0.9509180790960452 + ], + "112": [ + 129, + 0.9509180790960452 + ], + "113": [ + 130, + 0.952683615819209 + ], + "114": [ + 131, + 0.952683615819209 + ], + "115": [ + 132, + 0.9530367231638418 + ], + "116": [ + 133, + 0.9537429378531074 + ], + "117": [ + 134, + 0.9537429378531074 + ], + "118": [ + 135, + 0.9548022598870056 + ], + "119": [ + 136, + 0.9548022598870056 + ], + "120": [ + 137, + 0.9551553672316384 + ], + "121": [ + 138, + 0.9565677966101694 + ], + "122": [ + 140, + 0.9565677966101694 + ], + "123": [ + 141, + 0.9569209039548022 + ], + "124": [ + 143, + 0.9569209039548022 + ], + "125": [ + 144, + 0.9576271186440678 + ], + "126": [ + 147, + 0.9576271186440678 + ], + "127": [ + 148, + 0.9590395480225988 + ], + "128": [ + 149, + 0.9597457627118644 + ], + "129": [ + 150, + 0.96045197740113 + ], + "130": [ + 151, + 0.9608050847457628 + ], + "131": [ + 152, + 0.9608050847457628 + ], + "132": [ + 153, + 0.9611581920903954 + ], + "133": [ + 154, + 0.961864406779661 + ], + "134": [ + 155, + 0.961864406779661 + ], + "135": [ + 156, + 0.9622175141242938 + ], + "136": [ + 157, + 0.9625706214689266 + ], + "137": [ + 158, + 0.9625706214689266 + ], + "138": [ + 159, + 0.9629237288135594 + ], + "139": [ + 160, + 0.0003531073446327859 + ], + "140": [ + 163, + 0.0003531073446327859 + ], + "141": [ + 164, + 0.9625706214689266 + ], + "142": [ + 165, + 0.963276836158192 + ], + "143": [ + 176, + 0.963276836158192 + ], + "144": [ + 177, + 0.9636299435028248 + ], + "145": [ + 178, + 0.9636299435028248 + ], + "146": [ + 179, + 0.9643361581920904 + ], + "147": [ + 183, + 0.9643361581920904 + ], + "148": [ + 184, + 0.9646892655367232 + ], + "149": [ + 186, + 0.9646892655367232 + ], + "150": [ + 187, + 0.965042372881356 + ], + "151": [ + 189, + 0.965042372881356 + ], + "152": [ + 190, + 0.01412429378531077 + ], + "153": [ + 191, + 0.8591101694915254 + ], + "154": [ + 196, + 0.8591101694915254 + ], + "155": [ + 197, + 0.8594632768361582 + ], + "156": [ + 198, + 0.859816384180791 + ], + "157": [ + 199, + 0.8601694915254238 + ], + "158": [ + 201, + 0.8601694915254238 + ], + "159": [ + 202, + 0.8605225988700564 + ], + "160": [ + 203, + 0.9657485875706214 + ], + "161": [ + 204, + 0.965042372881356 + ], + "162": [ + 210, + 0.965042372881356 + ], + "163": [ + 211, + 0.9636299435028248 + ], + "164": [ + 212, + 0.965042372881356 + ], + "165": [ + 214, + 0.965042372881356 + ], + "166": [ + 215, + 0.21362994350282483 + ], + "167": [ + 217, + 0.21362994350282483 + ], + "168": [ + 218, + 0.2139830508474576 + ], + "169": [ + 219, + 0.2139830508474576 + ], + "170": [ + 220, + 0.014477401129943557 + ], + "171": [ + 221, + 0.014477401129943557 + ], + "172": [ + 222, + 0.014830508474576232 + ], + "173": [ + 223, + 0.013418079096045199 + ], + "174": [ + 225, + 0.013418079096045199 + ], + "175": [ + 226, + 0.007415254237288171 + ], + "176": [ + 232, + 0.007415254237288171 + ], + "177": [ + 233, + 0.008474576271186418 + ], + "178": [ + 234, + 0.008474576271186418 + ], + "179": [ + 235, + 0.10593220338983056 + ], + "180": [ + 236, + 0.9615112994350282 + ], + "181": [ + 238, + 0.9615112994350282 + ], + "182": [ + 239, + 0.9625706214689266 + ], + "183": [ + 240, + 0.963276836158192 + ], + "184": [ + 242, + 0.963276836158192 + ], + "185": [ + 243, + 0.9636299435028248 + ], + "186": [ + 244, + 0.9636299435028248 + ], + "187": [ + 245, + 0.9639830508474576 + ], + "188": [ + 246, + 0.9646892655367232 + ], + "189": [ + 247, + 0.965042372881356 + ], + "190": [ + 265, + 0.965042372881356 + ], + "191": [ + 266, + 0.11334745762711862 + ], + "192": [ + 269, + 0.11334745762711862 + ], + "193": [ + 270, + 0.10593220338983056 + ], + "194": [ + 271, + 0.10593220338983056 + ], + "195": [ + 272, + 0.11334745762711862 + ], + "196": [ + 273, + 0.9713983050847458 + ], + "197": [ + 274, + 0.9717514124293786 + ], + "198": [ + 275, + 0.9721045197740112 + ], + "199": [ + 276, + 0.9728107344632768 + ], + "200": [ + 277, + 0.9728107344632768 + ], + "201": [ + 278, + 0.9731638418079096 + ], + "202": [ + 279, + 0.9738700564971752 + ], + "203": [ + 280, + 0.9738700564971752 + ], + "204": [ + 281, + 0.974223163841808 + ], + "205": [ + 282, + 0.974223163841808 + ], + "206": [ + 283, + 0.9745762711864406 + ], + "207": [ + 286, + 0.9745762711864406 + ], + "208": [ + 287, + 0.014830508474576232 + ], + "209": [ + 288, + 0.014477401129943557 + ], + "210": [ + 290, + 0.014477401129943557 + ], + "211": [ + 291, + 0.015183615819209018 + ], + "212": [ + 292, + 0.015183615819209018 + ], + "213": [ + 293, + 0.015536723163841804 + ], + "214": [ + 294, + 0.015536723163841804 + ], + "215": [ + 295, + 0.0007062146892655718 + ], + "216": [ + 310, + 0.0007062146892655718 + ], + "217": [ + 311, + 0.0010593220338983578 + ], + "218": [ + 314, + 0.0010593220338983578 + ], + "219": [ + 315, + 0.016242937853107375 + ], + "220": [ + 316, + 0.9766949152542372 + ], + "221": [ + 317, + 0.9781073446327684 + ], + "222": [ + 320, + 0.9781073446327684 + ], + "223": [ + 321, + 0.9784604519774012 + ], + "224": [ + 322, + 0.978813559322034 + ], + "225": [ + 323, + 0.9791666666666666 + ], + "226": [ + 324, + 0.9798728813559322 + ], + "227": [ + 325, + 0.9798728813559322 + ], + "228": [ + 326, + 0.980225988700565 + ], + "229": [ + 327, + 0.9798728813559322 + ], + "230": [ + 330, + 0.9798728813559322 + ], + "231": [ + 331, + 0.2076271186440678 + ], + "232": [ + 332, + 0.19985875706214684 + ], + "233": [ + 333, + 0.19915254237288138 + ], + "234": [ + 334, + 0.20833333333333337 + ], + "235": [ + 335, + 0.21362994350282483 + ], + "236": [ + 336, + 0.21362994350282483 + ], + "237": [ + 337, + 0.97704802259887 + ], + "238": [ + 338, + 0.961864406779661 + ], + "239": [ + 339, + 0.9625706214689266 + ], + "240": [ + 340, + 0.9625706214689266 + ], + "241": [ + 341, + 0.9530367231638418 + ], + "242": [ + 343, + 0.9530367231638418 + ], + "243": [ + 344, + 0.8739406779661016 + ], + "244": [ + 349, + 0.8739406779661016 + ], + "245": [ + 350, + 0.9823446327683616 + ], + "246": [ + 351, + 0.9826977401129944 + ], + "247": [ + 354, + 0.9826977401129944 + ], + "248": [ + 355, + 0.9830508474576272 + ], + "249": [ + 358, + 0.9830508474576272 + ], + "250": [ + 359, + 0.9834039548022598 + ], + "251": [ + 364, + 0.9834039548022598 + ], + "252": [ + 365, + 0.9837570621468926 + ], + "253": [ + 366, + 0.0003531073446327859 + ], + "254": [ + 375, + 0.0003531073446327859 + ], + "255": [ + 376, + 0.9837570621468926 + ], + "256": [ + 379, + 0.9837570621468926 + ], + "257": [ + 380, + 0.10769774011299438 + ], + "258": [ + 382, + 0.10769774011299438 + ], + "259": [ + 383, + 0.9837570621468926 + ], + "260": [ + 388, + 0.9837570621468926 + ], + "261": [ + 389, + 0.9841101694915254 + ], + "262": [ + 404, + 0.9841101694915254 + ], + "263": [ + 405, + 0.9851694915254238 + ], + "264": [ + 407, + 0.9851694915254238 + ], + "265": [ + 408, + 0.9844632768361582 + ], + "266": [ + 410, + 0.9844632768361582 + ], + "267": [ + 411, + 0.9851694915254238 + ], + "268": [ + 418, + 0.9851694915254238 + ], + "269": [ + 419, + 0.8774717514124294 + ], + "270": [ + 421, + 0.8774717514124294 + ], + "271": [ + 422, + 0.9851694915254238 + ], + "272": [ + 423, + 0.9851694915254238 + ], + "273": [ + 424, + 0.9858757062146892 + ], + "274": [ + 425, + 0.9851694915254238 + ], + "275": [ + 426, + 0.984816384180791 + ], + "276": [ + 427, + 0.984816384180791 + ], + "277": [ + 428, + 0.9855225988700564 + ], + "278": [ + 429, + 0.9858757062146892 + ], + "279": [ + 445, + 0.9858757062146892 + ], + "280": [ + 446, + 0.986228813559322 + ], + "281": [ + 448, + 0.986228813559322 + ], + "282": [ + 449, + 0.9865819209039548 + ], + "283": [ + 483, + 0.9865819209039548 + ], + "284": [ + 484, + 0.9869350282485876 + ], + "285": [ + 518, + 0.9869350282485876 + ], + "286": [ + 519, + 0.9872881355932204 + ], + "287": [ + 533, + 0.9872881355932204 + ], + "288": [ + 534, + 0.9876412429378532 + ], + "289": [ + 535, + 0.9876412429378532 + ], + "290": [ + 536, + 0.9879943502824858 + ], + "291": [ + 537, + 0.9883474576271186 + ], + "292": [ + 548, + 0.9883474576271186 + ], + "293": [ + 549, + 0.9887005649717514 + ], + "294": [ + 570, + 0.9887005649717514 + ], + "295": [ + 571, + 0.9890536723163842 + ], + "296": [ + 599, + 0.9890536723163842 + ], + "297": [ + 600, + 0.989406779661017 + ], + "298": [ + 621, + 0.989406779661017 + ], + "299": [ + 622, + 0.9897598870056498 + ], + "300": [ + 630, + 0.9897598870056498 + ], + "301": [ + 631, + 0.9901129943502824 + ], + "302": [ + 640, + 0.9901129943502824 + ], + "303": [ + 641, + 0.9904661016949152 + ], + "304": [ + 663, + 0.9904661016949152 + ], + "305": [ + 664, + 0.0003531073446327859 + ], + "306": [ + 666, + 0.0003531073446327859 + ], + "307": [ + 667, + 0.9904661016949152 + ], + "308": [ + 693, + 0.9904661016949152 + ], + "309": [ + 694, + 0.990819209039548 + ], + "310": [ + 790, + 0.990819209039548 + ], + "311": [ + 791, + 0.0003531073446327859 + ], + "312": [ + 793, + 0.0003531073446327859 + ], + "313": [ + 794, + 0.990819209039548 + ], + "314": [ + 796, + 0.990819209039548 + ], + "315": [ + 797, + 0.9947033898305084 + ], + "316": [ + 798, + 0.9947033898305084 + ], + "317": [ + 799, + 0.9950564971751412 + ], + "318": [ + 816, + 0.9950564971751412 + ], + "319": [ + 817, + 0.9957627118644068 + ], + "320": [ + 818, + 0.9957627118644068 + ], + "321": [ + 819, + 0.9982344632768362 + ], + "322": [ + 820, + 0.9982344632768362 + ], + "323": [ + 821, + 0.998587570621469 + ], + "324": [ + 945, + 0.998587570621469 + ], + "325": [ + 946, + 0.9989406779661016 + ], + "326": [ + 958, + 0.9989406779661016 + ], + "327": [ + 959, + 0.998587570621469 + ], + "328": [ + 967, + 0.998587570621469 + ], + "329": [ + 968, + 0.9989406779661016 + ], + "330": [ + 972, + 0.9989406779661016 + ], + "331": [ + 973, + 0.9992937853107344 + ], + "332": [ + 1037, + 0.9992937853107344 + ], + "333": [ + 1038, + 0.9989406779661016 + ], + "334": [ + 1040, + 0.9989406779661016 + ], + "335": [ + 1041, + 0.9992937853107344 + ], + "336": [ + 1052, + 0.9992937853107344 + ], + "337": [ + 1053, + 0.0003531073446327859 + ], + "338": [ + 1055, + 0.0003531073446327859 + ], + "339": [ + 1056, + 0.9992937853107344 + ], + "340": [ + 1127, + 0.9992937853107344 + ], + "341": [ + 1128, + 0.9996468926553672 + ], + "342": [ + 1438, + 0.9996468926553672 + ], + "343": [ + 1439, + 1.0 + ], + "344": [ + 1939, + 1.0 + ], + "345": [ + 1940, + 0.9996468926553672 + ], + "346": [ + 1941, + 1.0 + ], + "347": [ + 1954, + 1.0 + ], + "348": [ + 1955, + 0.0003531073446327859 + ], + "349": [ + 1956, + 1.0 + ], + "350": [ + 2309, + 1.0 + ], + "351": [ + 2310, + 0.9996468926553672 + ], + "352": [ + 2311, + 0.9996468926553672 + ], + "353": [ + 2312, + 0.9992937853107344 + ], + "354": [ + 2327, + 0.9992937853107344 + ], + "355": [ + 2328, + 0.9989406779661016 + ], + "356": [ + 2329, + 0.9989406779661016 + ], + "357": [ + 2330, + 0.9992937853107344 + ], + "358": [ + 2337, + 0.9992937853107344 + ], + "359": [ + 2338, + 0.9989406779661016 + ], + "360": [ + 2339, + 0.9992937853107344 + ], + "361": [ + 2340, + 0.9992937853107344 + ], + "362": [ + 2341, + 0.9996468926553672 + ], + "363": [ + 2350, + 0.9996468926553672 + ], + "364": [ + 2351, + 0.9992937853107344 + ], + "365": [ + 2352, + 0.9992937853107344 + ], + "366": [ + 2353, + 0.9996468926553672 + ], + "367": [ + 2368, + 0.9996468926553672 + ], + "368": [ + 2369, + 1.0 + ], + "369": [ + 2445, + 1.0 + ], + "370": [ + 2446, + 0.9989406779661016 + ], + "371": [ + 2448, + 0.9989406779661016 + ], + "372": [ + 2449, + 1.0 + ], + "373": [ + 2614, + 1.0 + ], + "374": [ + 2615, + 0.8915960451977402 + ], + "375": [ + 2629, + 0.8915960451977402 + ], + "376": [ + 2630, + 0.9989406779661016 + ], + "377": [ + 2635, + 0.9989406779661016 + ], + "378": [ + 2636, + 0.0003531073446327859 + ], + "379": [ + 2641, + 0.0003531073446327859 + ], + "380": [ + 2642, + 0.9989406779661016 + ], + "381": [ + 2647, + 0.9989406779661016 + ], + "382": [ + 2648, + 1.0 + ], + "383": [ + 2664, + 1.0 + ], + "384": [ + 2665, + 0.9996468926553672 + ], + "385": [ + 2669, + 0.9996468926553672 + ], + "386": [ + 2670, + 0.9805790960451978 + ], + "387": [ + 2672, + 0.9805790960451978 + ], + "388": [ + 2673, + 0.7598870056497176 + ], + "389": [ + 2675, + 0.7598870056497176 + ], + "390": [ + 2676, + 0.9805790960451978 + ], + "391": [ + 2680, + 0.9805790960451978 + ], + "392": [ + 2681, + 0.980225988700565 + ], + "393": [ + 2682, + 0.9992937853107344 + ], + "394": [ + 2683, + 0.9992937853107344 + ], + "395": [ + 2684, + 0.9996468926553672 + ], + "396": [ + 2687, + 0.9996468926553672 + ], + "397": [ + 2688, + 0.003884180790960423 + ], + "398": [ + 2689, + 0.0017655367231638186 + ], + "399": [ + 2690, + 0.0028248587570621764 + ], + "400": [ + 2695, + 0.0028248587570621764 + ], + "401": [ + 2696, + 0.8930084745762712 + ], + "402": [ + 2697, + 0.8930084745762712 + ], + "403": [ + 2698, + 0.896186440677966 + ], + "404": [ + 2699, + 0.8958333333333334 + ], + "405": [ + 2700, + 0.8965395480225988 + ], + "406": [ + 2701, + 0.9996468926553672 + ], + "407": [ + 2702, + 1.0 + ], + "408": [ + 2703, + 0.9996468926553672 + ], + "409": [ + 2705, + 0.9996468926553672 + ], + "410": [ + 2706, + 1.0 + ], + "411": [ + 2711, + 1.0 + ], + "412": [ + 2712, + 0.9975282485875706 + ], + "413": [ + 2713, + 0.9992937853107344 + ], + "414": [ + 2717, + 0.9992937853107344 + ], + "415": [ + 2718, + 1.0 + ], + "416": [ + 2720, + 1.0 + ], + "417": [ + 2721, + 0.9989406779661016 + ], + "418": [ + 2722, + 0.8926553672316384 + ], + "419": [ + 2723, + 0.8905367231638418 + ], + "420": [ + 2724, + 0.8915960451977402 + ], + "421": [ + 2725, + 0.8915960451977402 + ], + "422": [ + 2726, + 0.8919491525423728 + ], + "423": [ + 2727, + 0.9982344632768362 + ], + "424": [ + 2729, + 0.9982344632768362 + ], + "425": [ + 2730, + 0.1069915254237288 + ], + "426": [ + 2731, + 0.1069915254237288 + ], + "427": [ + 2732, + 0.10840395480225984 + ], + "428": [ + 2733, + 0.9759887005649718 + ], + "429": [ + 2735, + 0.9759887005649718 + ], + "430": [ + 2736, + 0.1069915254237288 + ], + "431": [ + 2737, + 0.1094632768361582 + ], + "432": [ + 2738, + 0.11052259887005644 + ], + "433": [ + 2739, + 0.11087570621468923 + ], + "434": [ + 2740, + 0.7793079096045198 + ], + "435": [ + 2742, + 0.7793079096045198 + ], + "436": [ + 2743, + 1.0 + ], + "437": [ + 2744, + 0.9989406779661016 + ], + "438": [ + 2745, + 0.996822033898305 + ], + "439": [ + 2746, + 0.9989406779661016 + ], + "440": [ + 2747, + 0.0003531073446327859 + ], + "441": [ + 2749, + 0.0003531073446327859 + ], + "442": [ + 2750, + 1.0 + ], + "443": [ + 2943, + 1.0 + ], + "444": [ + 2944, + 0.011299435028248594 + ], + "445": [ + 2946, + 0.011299435028248594 + ], + "446": [ + 2947, + 1.0 + ], + "447": [ + 3250, + 1.0 + ], + "448": [ + 3251, + 0.0003531073446327859 + ], + "449": [ + 3252, + 1.0 + ], + "450": [ + 3261, + 1.0 + ], + "451": [ + 3262, + 0.9996468926553672 + ], + "452": [ + 3263, + 1.0 + ], + "453": [ + 3622, + 1.0 + ], + "454": [ + 3623, + 0.9996468926553672 + ], + "455": [ + 3625, + 0.9996468926553672 + ], + "456": [ + 3626, + 1.0 + ], + "457": [ + 3737, + 1.0 + ], + "458": [ + 3738, + 0.9996468926553672 + ], + "459": [ + 3740, + 0.9996468926553672 + ], + "460": [ + 3741, + 1.0 + ], + "461": [ + 4460, + 1.0 + ], + "462": [ + 4461, + 0.0003531073446327859 + ], + "463": [ + 4462, + 1.0 + ], + "464": [ + 4518, + 1.0 + ], + "465": [ + 4519, + 0.0003531073446327859 + ], + "466": [ + 4520, + 1.0 + ], + "467": [ + 4544, + 1.0 + ], + "468": [ + 4545, + 0.0003531073446327859 + ], + "469": [ + 4546, + 1.0 + ], + "470": [ + 5153, + 1.0 + ], + "471": [ + 5154, + 0.9996468926553672 + ], + "472": [ + 5162, + 0.9996468926553672 + ], + "473": [ + 5163, + 1.0 + ], + "474": [ + 5281, + 1.0 + ], + "475": [ + 5282, + 0.0010593220338983578 + ], + "476": [ + 5284, + 0.0010593220338983578 + ], + "477": [ + 5285, + 1.0 + ], + "478": [ + 5596, + 1.0 + ], + "479": [ + 5597, + 0.0003531073446327859 + ], + "480": [ + 5599, + 0.0003531073446327859 + ], + "481": [ + 5600, + 1.0 + ], + "482": [ + 5771, + 1.0 + ], + "483": [ + 5772, + 0.0010593220338983578 + ], + "484": [ + 5774, + 0.0010593220338983578 + ], + "485": [ + 5775, + 1.0 + ], + "486": [ + 5818, + 1.0 + ], + "487": [ + 5819, + 0.9367937853107344 + ], + "488": [ + 5821, + 0.9367937853107344 + ], + "489": [ + 5822, + 1.0 + ], + "490": [ + 5881, + 1.0 + ], + "491": [ + 5882, + 0.9996468926553672 + ], + "492": [ + 5911, + 0.9996468926553672 + ], + "493": [ + 5912, + 1.0 + ], + "494": [ + 5978, + 1.0 + ], + "495": [ + 5979, + 0.0003531073446327859 + ], + "496": [ + 5981, + 0.0003531073446327859 + ], + "497": [ + 5982, + 1.0 + ], + "498": [ + 6112, + 1.0 + ], + "499": [ + 6113, + 0.9989406779661016 + ], + "500": [ + 6114, + 0.9989406779661016 + ], + "501": [ + 6115, + 1.0 + ], + "502": [ + 6120, + 1.0 + ], + "503": [ + 6121, + 0.012711864406779627 + ], + "504": [ + 6123, + 0.012711864406779627 + ], + "505": [ + 6124, + 0.012005649717514166 + ], + "506": [ + 6161, + 0.012005649717514166 + ], + "507": [ + 6162, + 1.0 + ], + "508": [ + 6163, + 0.9989406779661016 + ], + "509": [ + 6164, + 0.9826977401129944 + ], + "510": [ + 6165, + 0.9826977401129944 + ], + "511": [ + 6166, + 0.9837570621468926 + ], + "512": [ + 6169, + 0.9837570621468926 + ], + "513": [ + 6170, + 0.9834039548022598 + ], + "514": [ + 6171, + 0.9834039548022598 + ], + "515": [ + 6172, + 0.9830508474576272 + ], + "516": [ + 6173, + 0.9834039548022598 + ], + "517": [ + 6174, + 0.965042372881356 + ], + "518": [ + 6175, + 0.9661016949152542 + ], + "519": [ + 6176, + 0.9661016949152542 + ], + "520": [ + 6177, + 0.1405367231638418 + ], + "521": [ + 6178, + 0.12535310734463279 + ], + "522": [ + 6179, + 0.03778248587570621 + ], + "523": [ + 6180, + 0.009887005649717562 + ], + "524": [ + 6182, + 0.009887005649717562 + ], + "525": [ + 6183, + 0.0003531073446327859 + ], + "526": [ + 6191, + 0.0003531073446327859 + ], + "527": [ + 6192, + 0.010946327683615809 + ], + "528": [ + 6193, + 0.010946327683615809 + ], + "529": [ + 6194, + 0.011299435028248594 + ], + "530": [ + 6196, + 0.011299435028248594 + ], + "531": [ + 6197, + 0.03742937853107342 + ], + "532": [ + 6198, + 0.11758474576271183 + ], + "533": [ + 6199, + 0.963276836158192 + ], + "534": [ + 6200, + 0.978813559322034 + ], + "535": [ + 6201, + 0.9777542372881356 + ], + "536": [ + 6202, + 0.9777542372881356 + ], + "537": [ + 6203, + 0.903954802259887 + ], + "538": [ + 6204, + 0.9050141242937852 + ], + "539": [ + 6205, + 0.9011299435028248 + ], + "540": [ + 6206, + 0.21998587570621464 + ], + "541": [ + 6207, + 0.19279661016949157 + ], + "542": [ + 6208, + 0.1896186440677966 + ], + "543": [ + 6209, + 0.196680790960452 + ], + "544": [ + 6210, + 0.0028248587570621764 + ], + "545": [ + 6211, + 0.006002824858757028 + ], + "546": [ + 6212, + 0.007415254237288171 + ], + "547": [ + 6213, + 0.007415254237288171 + ], + "548": [ + 6214, + 0.004237288135593209 + ], + "549": [ + 6215, + 0.0028248587570621764 + ], + "550": [ + 6216, + 0.14159604519774016 + ], + "551": [ + 6217, + 0.14159604519774016 + ], + "552": [ + 6218, + 0.07450564971751417 + ], + "553": [ + 6219, + 0.07450564971751417 + ], + "554": [ + 6220, + 0.07768361581920902 + ], + "555": [ + 6221, + 0.06744350282485878 + ], + "556": [ + 6222, + 0.067090395480226 + ], + "557": [ + 6224, + 0.067090395480226 + ], + "558": [ + 6225, + 0.05861581920903958 + ], + "559": [ + 6232, + 0.05861581920903958 + ], + "560": [ + 6233, + 0.07485875706214684 + ], + "561": [ + 6240, + 0.07485875706214684 + ], + "562": [ + 6241, + 0.07521186440677963 + ], + "563": [ + 6244, + 0.07521186440677963 + ], + "564": [ + 6245, + 0.11405367231638419 + ], + "565": [ + 6246, + 0.17973163841807904 + ], + "566": [ + 6248, + 0.17973163841807904 + ], + "567": [ + 6249, + 0.15536723163841804 + ], + "568": [ + 6250, + 0.15536723163841804 + ], + "569": [ + 6251, + 0.15748587570621464 + ], + "570": [ + 6252, + 0.15677966101694918 + ], + "571": [ + 6253, + 0.15677966101694918 + ], + "572": [ + 6254, + 0.957274011299435 + ], + "573": [ + 6255, + 0.9505649717514124 + ], + "574": [ + 6256, + 0.0981638418079096 + ], + "575": [ + 6257, + 0.0014124293785310327 + ], + "576": [ + 6261, + 0.0014124293785310327 + ], + "577": [ + 6262, + 0.08192090395480223 + ], + "578": [ + 6263, + 0.09745762711864403 + ], + "579": [ + 6264, + 0.13453389830508478 + ], + "580": [ + 6266, + 0.13453389830508478 + ], + "581": [ + 6267, + 0.9470338983050848 + ], + "582": [ + 6268, + 0.9456214689265536 + ], + "583": [ + 6269, + 0.9452683615819208 + ], + "584": [ + 6270, + 0.9311440677966102 + ], + "585": [ + 6271, + 0.9452683615819208 + ], + "586": [ + 6272, + 0.9452683615819208 + ], + "587": [ + 6273, + 0.0010593220338983578 + ], + "588": [ + 6280, + 0.0010593220338983578 + ], + "589": [ + 6281, + 0.06532485875706218 + ], + "590": [ + 6282, + 0.06638418079096042 + ], + "591": [ + 6286, + 0.06638418079096042 + ], + "592": [ + 6287, + 0.06603107344632764 + ], + "593": [ + 6288, + 0.06497175141242939 + ], + "594": [ + 6290, + 0.06497175141242939 + ], + "595": [ + 6291, + 0.0007062146892655718 + ], + "596": [ + 6292, + 0.0017655367231638186 + ], + "597": [ + 6300, + 0.0017655367231638186 + ], + "598": [ + 6301, + 0.0010593220338983578 + ], + "599": [ + 6306, + 0.0010593220338983578 + ], + "600": [ + 6307, + 0.9562146892655368 + ], + "601": [ + 6308, + 0.9565677966101694 + ], + "602": [ + 6309, + 0.9569209039548022 + ], + "603": [ + 6310, + 0.957274011299435 + ], + "604": [ + 6311, + 0.957274011299435 + ], + "605": [ + 6312, + 0.8209745762711864 + ], + "606": [ + 6313, + 0.7457627118644068 + ], + "607": [ + 6314, + 0.7464689265536724 + ], + "608": [ + 6315, + 0.007062146892655385 + ], + "609": [ + 6316, + 0.007768361581920957 + ], + "610": [ + 6319, + 0.007768361581920957 + ], + "611": [ + 6320, + 0.005649717514124242 + ], + "612": [ + 6321, + 0.005649717514124242 + ], + "613": [ + 6322, + 0.005296610169491567 + ], + "614": [ + 6323, + 0.005296610169491567 + ], + "615": [ + 6324, + 0.006002824858757028 + ], + "616": [ + 6326, + 0.006002824858757028 + ], + "617": [ + 6327, + 0.007062146892655385 + ], + "618": [ + 6337, + 0.007062146892655385 + ], + "619": [ + 6338, + 0.00918079096045199 + ], + "620": [ + 6339, + 0.14618644067796616 + ], + "621": [ + 6340, + 0.21963276836158196 + ], + "622": [ + 6341, + 0.21963276836158196 + ], + "623": [ + 6342, + 0.33333333333333337 + ], + "624": [ + 6344, + 0.33333333333333337 + ], + "625": [ + 6345, + 0.3326271186440678 + ], + "626": [ + 6347, + 0.3326271186440678 + ], + "627": [ + 6348, + 0.9855225988700564 + ], + "628": [ + 6349, + 1.0 + ], + "629": [ + 6382, + 1.0 + ], + "630": [ + 6383, + 0.9996468926553672 + ], + "631": [ + 6440, + 0.9996468926553672 + ], + "632": [ + 6441, + 0.9982344632768362 + ], + "633": [ + 6442, + 0.9982344632768362 + ], + "634": [ + 6443, + 0.9996468926553672 + ], + "635": [ + 6444, + 0.9992937853107344 + ], + "636": [ + 6453, + 0.9992937853107344 + ], + "637": [ + 6454, + 0.998587570621469 + ], + "638": [ + 6456, + 0.998587570621469 + ], + "639": [ + 6457, + 0.0007062146892655718 + ], + "640": [ + 6459, + 0.0007062146892655718 + ], + "641": [ + 6460, + 0.4593926553672316 + ], + "642": [ + 6463, + 0.4593926553672316 + ], + "643": [ + 6464, + 0.37605932203389836 + ], + "644": [ + 6465, + 0.37570621468926557 + ], + "645": [ + 6466, + 0.3721751412429378 + ], + "646": [ + 6467, + 0.350635593220339 + ], + "647": [ + 6468, + 0.34957627118644063 + ], + "648": [ + 6469, + 0.32662429378531077 + ], + "649": [ + 6470, + 0.2831920903954802 + ], + "650": [ + 6471, + 0.20444915254237284 + ], + "651": [ + 6472, + 0.19985875706214684 + ], + "652": [ + 6473, + 0.19703389830508478 + ], + "653": [ + 6474, + 0.19597457627118642 + ], + "654": [ + 6475, + 0.19738700564971756 + ], + "655": [ + 6476, + 0.1359463276836158 + ], + "656": [ + 6477, + 0.13488700564971756 + ], + "657": [ + 6479, + 0.13488700564971756 + ], + "658": [ + 6480, + 0.02153954802259883 + ], + "659": [ + 6481, + 0.7323446327683616 + ], + "660": [ + 6482, + 0.7323446327683616 + ], + "661": [ + 6483, + 0.007415254237288171 + ], + "662": [ + 6485, + 0.007415254237288171 + ], + "663": [ + 6486, + 0.07062146892655363 + ], + "664": [ + 6487, + 0.07062146892655363 + ], + "665": [ + 6488, + 0.8562853107344632 + ], + "666": [ + 6489, + 0.8513418079096045 + ], + "667": [ + 6490, + 0.8513418079096045 + ], + "668": [ + 6491, + 0.8774717514124294 + ], + "669": [ + 6492, + 0.879590395480226 + ], + "670": [ + 6493, + 0.8739406779661016 + ], + "671": [ + 6494, + 0.7863700564971752 + ], + "672": [ + 6495, + 0.862994350282486 + ], + "673": [ + 6496, + 0.8686440677966102 + ], + "674": [ + 6497, + 0.8697033898305084 + ], + "675": [ + 6498, + 0.890183615819209 + ], + "676": [ + 6499, + 0.9339689265536724 + ], + "677": [ + 6500, + 0.9399717514124294 + ], + "678": [ + 6501, + 0.9477401129943502 + ], + "679": [ + 6502, + 0.9491525423728814 + ], + "680": [ + 6503, + 0.9982344632768362 + ], + "681": [ + 6508, + 0.9982344632768362 + ], + "682": [ + 6509, + 0.0007062146892655718 + ], + "683": [ + 6510, + 0.0010593220338983578 + ], + "684": [ + 6511, + 0.0007062146892655718 + ], + "685": [ + 6512, + 0.0007062146892655718 + ], + "686": [ + 6513, + 0.018714689265536766 + ], + "687": [ + 6516, + 0.018714689265536766 + ], + "688": [ + 6517, + 0.998587570621469 + ], + "689": [ + 6519, + 0.998587570621469 + ], + "690": [ + 6520, + 0.0021186440677966045 + ], + "691": [ + 6523, + 0.0021186440677966045 + ], + "692": [ + 6524, + 0.0201271186440678 + ], + "693": [ + 6530, + 0.0201271186440678 + ], + "694": [ + 6531, + 0.9992937853107344 + ], + "695": [ + 6536, + 0.9992937853107344 + ], + "696": [ + 6537, + 0.9858757062146892 + ], + "697": [ + 6545, + 0.9858757062146892 + ], + "698": [ + 6546, + 0.9992937853107344 + ], + "699": [ + 6547, + 0.9992937853107344 + ], + "700": [ + 6548, + 0.9989406779661016 + ], + "701": [ + 6554, + 0.9989406779661016 + ], + "702": [ + 6555, + 0.9982344632768362 + ], + "703": [ + 6564, + 0.9982344632768362 + ], + "704": [ + 6565, + 0.9989406779661016 + ], + "705": [ + 6586, + 0.9989406779661016 + ], + "706": [ + 6587, + 0.993997175141243 + ], + "707": [ + 6593, + 0.993997175141243 + ], + "708": [ + 6594, + 0.9989406779661016 + ], + "709": [ + 6595, + 0.9989406779661016 + ], + "710": [ + 6596, + 0.8930084745762712 + ], + "711": [ + 6597, + 0.8930084745762712 + ], + "712": [ + 6598, + 0.8915960451977402 + ], + "713": [ + 6599, + 0.9975282485875706 + ], + "714": [ + 6600, + 0.919138418079096 + ], + "715": [ + 6601, + 0.005649717514124242 + ], + "716": [ + 6602, + 0.005649717514124242 + ], + "717": [ + 6603, + 0.0007062146892655718 + ], + "718": [ + 6607, + 0.0007062146892655718 + ], + "719": [ + 6608, + 0.005649717514124242 + ], + "720": [ + 6609, + 0.005649717514124242 + ], + "721": [ + 6610, + 0.9173728813559322 + ], + "722": [ + 6611, + 0.9173728813559322 + ], + "723": [ + 6612, + 0.969632768361582 + ], + "724": [ + 6613, + 0.9728107344632768 + ], + "725": [ + 6614, + 0.9728107344632768 + ], + "726": [ + 6615, + 0.9989406779661016 + ], + "727": [ + 6620, + 0.9989406779661016 + ], + "728": [ + 6621, + 0.998587570621469 + ], + "729": [ + 6623, + 0.998587570621469 + ], + "730": [ + 6624, + 0.9989406779661016 + ], + "731": [ + 6628, + 0.9989406779661016 + ], + "732": [ + 6629, + 0.0010593220338983578 + ], + "733": [ + 6631, + 0.0010593220338983578 + ], + "734": [ + 6632, + 0.9989406779661016 + ], + "735": [ + 6633, + 0.9989406779661016 + ], + "736": [ + 6634, + 0.9982344632768362 + ], + "737": [ + 6635, + 0.9798728813559322 + ], + "738": [ + 6636, + 0.978813559322034 + ], + "739": [ + 6637, + 0.9795197740112994 + ], + "740": [ + 6638, + 0.9279661016949152 + ], + "741": [ + 6639, + 0.9290254237288136 + ], + "742": [ + 6640, + 0.9290254237288136 + ], + "743": [ + 6641, + 0.9989406779661016 + ], + "744": [ + 6651, + 0.9989406779661016 + ], + "745": [ + 6652, + 0.0007062146892655718 + ], + "746": [ + 6678, + 0.0007062146892655718 + ], + "747": [ + 6679, + 0.9989406779661016 + ], + "748": [ + 6690, + 0.9989406779661016 + ], + "749": [ + 6691, + 0.017655367231638408 + ], + "750": [ + 6694, + 0.017655367231638408 + ], + "751": [ + 6695, + 0.004943502824858781 + ], + "752": [ + 6696, + 0.0028248587570621764 + ], + "753": [ + 6697, + 0.0028248587570621764 + ], + "754": [ + 6698, + 0.015536723163841804 + ], + "755": [ + 6699, + 0.015536723163841804 + ], + "756": [ + 6700, + 0.9989406779661016 + ], + "757": [ + 6703, + 0.9989406779661016 + ], + "758": [ + 6704, + 0.9971751412429378 + ], + "759": [ + 6705, + 0.9795197740112994 + ], + "760": [ + 6706, + 0.9774011299435028 + ], + "761": [ + 6707, + 0.9615112994350282 + ], + "762": [ + 6708, + 0.8301553672316384 + ], + "763": [ + 6709, + 0.8100282485875706 + ], + "764": [ + 6710, + 0.8117937853107344 + ], + "765": [ + 6711, + 0.8343926553672316 + ], + "766": [ + 6712, + 0.840042372881356 + ], + "767": [ + 6713, + 0.8396892655367232 + ], + "768": [ + 6714, + 0.8403954802259888 + ], + "769": [ + 6715, + 0.7531779661016949 + ], + "770": [ + 6716, + 0.7556497175141244 + ], + "771": [ + 6717, + 0.8774717514124294 + ], + "772": [ + 6718, + 0.9198446327683616 + ], + "773": [ + 6719, + 0.8365112994350282 + ], + "774": [ + 6720, + 0.8343926553672316 + ], + "775": [ + 6721, + 0.8343926553672316 + ], + "776": [ + 6722, + 0.8312146892655368 + ], + "777": [ + 6723, + 0.8298022598870056 + ], + "778": [ + 6724, + 0.6882062146892656 + ], + "779": [ + 6725, + 0.6878531073446328 + ], + "780": [ + 6726, + 0.6867937853107344 + ], + "781": [ + 6727, + 0.6751412429378532 + ], + "782": [ + 6728, + 0.6949152542372881 + ], + "783": [ + 6729, + 0.6949152542372881 + ], + "784": [ + 6730, + 0.7030367231638418 + ], + "785": [ + 6731, + 0.7673022598870056 + ], + "786": [ + 6732, + 0.6292372881355932 + ], + "787": [ + 6733, + 0.7528248587570622 + ], + "788": [ + 6734, + 0.754590395480226 + ], + "789": [ + 6735, + 0.7567090395480226 + ], + "790": [ + 6736, + 0.8386299435028248 + ], + "791": [ + 6737, + 0.8569915254237288 + ], + "792": [ + 6738, + 0.8573446327683616 + ], + "793": [ + 6739, + 0.8605225988700564 + ], + "794": [ + 6740, + 0.8605225988700564 + ], + "795": [ + 6741, + 0.9982344632768362 + ], + "796": [ + 6754, + 0.9982344632768362 + ], + "797": [ + 6755, + 0.9989406779661016 + ], + "798": [ + 6775, + 0.9989406779661016 + ], + "799": [ + 6776, + 0.998587570621469 + ], + "800": [ + 6777, + 0.0003531073446327859 + ], + "801": [ + 6778, + 0.998587570621469 + ], + "802": [ + 6783, + 0.998587570621469 + ], + "803": [ + 6784, + 0.0010593220338983578 + ], + "804": [ + 6789, + 0.0010593220338983578 + ], + "805": [ + 6790, + 0.998587570621469 + ], + "806": [ + 6792, + 0.998587570621469 + ], + "807": [ + 6793, + 0.9982344632768362 + ], + "808": [ + 6794, + 0.998587570621469 + ], + "809": [ + 6800, + 0.998587570621469 + ], + "810": [ + 6801, + 0.9989406779661016 + ], + "811": [ + 6867, + 0.9989406779661016 + ], + "812": [ + 6868, + 0.77295197740113 + ], + "813": [ + 6869, + 0.02153954802259883 + ], + "814": [ + 6870, + 0.02153954802259883 + ], + "815": [ + 6871, + 0.0007062146892655718 + ], + "816": [ + 6872, + 0.0021186440677966045 + ], + "817": [ + 6873, + 0.014830508474576232 + ], + "818": [ + 6874, + 0.22951977401129942 + ], + "819": [ + 6875, + 0.9989406779661016 + ], + "820": [ + 6887, + 0.9989406779661016 + ], + "821": [ + 6888, + 0.0826271186440678 + ], + "822": [ + 6889, + 0.0007062146892655718 + ], + "823": [ + 6893, + 0.0007062146892655718 + ], + "824": [ + 6894, + 0.9950564971751412 + ], + "825": [ + 6897, + 0.9950564971751412 + ], + "826": [ + 6898, + 0.9364406779661016 + ], + "827": [ + 6899, + 0.017302259887005622 + ], + "828": [ + 6900, + 0.004590395480225995 + ], + "829": [ + 6901, + 0.005296610169491567 + ], + "830": [ + 6902, + 0.007415254237288171 + ], + "831": [ + 6905, + 0.007415254237288171 + ], + "832": [ + 6906, + 0.0017655367231638186 + ], + "833": [ + 6907, + 0.0017655367231638186 + ], + "834": [ + 6908, + 0.0024717514124293904 + ], + "835": [ + 6909, + 0.015536723163841804 + ], + "836": [ + 6910, + 0.993997175141243 + ], + "837": [ + 6917, + 0.993997175141243 + ], + "838": [ + 6918, + 0.9989406779661016 + ], + "839": [ + 7049, + 0.9989406779661016 + ], + "840": [ + 7050, + 0.998587570621469 + ], + "841": [ + 7096, + 0.998587570621469 + ], + "842": [ + 7097, + 0.9978813559322034 + ], + "843": [ + 7102, + 0.9978813559322034 + ], + "844": [ + 7103, + 0.998587570621469 + ], + "845": [ + 7156, + 0.998587570621469 + ], + "846": [ + 7157, + 0.9982344632768362 + ], + "847": [ + 7184, + 0.9982344632768362 + ], + "848": [ + 7185, + 0.0010593220338983578 + ], + "849": [ + 7193, + 0.0010593220338983578 + ], + "850": [ + 7194, + 0.9982344632768362 + ], + "851": [ + 7200, + 0.9982344632768362 + ], + "852": [ + 7201, + 0.0007062146892655718 + ], + "853": [ + 7209, + 0.0007062146892655718 + ], + "854": [ + 7210, + 0.9982344632768362 + ], + "855": [ + 7213, + 0.9982344632768362 + ], + "856": [ + 7214, + 0.9978813559322034 + ], + "857": [ + 7215, + 0.996822033898305 + ], + "858": [ + 7226, + 0.996822033898305 + ], + "859": [ + 7227, + 0.9964689265536724 + ], + "860": [ + 7229, + 0.9964689265536724 + ], + "861": [ + 7230, + 0.996822033898305 + ], + "862": [ + 7234, + 0.996822033898305 + ], + "863": [ + 7235, + 0.9964689265536724 + ], + "864": [ + 7257, + 0.9964689265536724 + ], + "865": [ + 7258, + 0.9961158192090396 + ], + "866": [ + 7272, + 0.9961158192090396 + ], + "867": [ + 7273, + 0.9957627118644068 + ], + "868": [ + 7287, + 0.9957627118644068 + ], + "869": [ + 7288, + 0.0003531073446327859 + ], + "870": [ + 7290, + 0.0003531073446327859 + ], + "871": [ + 7291, + 0.9957627118644068 + ], + "872": [ + 7294, + 0.9957627118644068 + ], + "873": [ + 7295, + 0.995409604519774 + ], + "874": [ + 7336, + 0.995409604519774 + ], + "875": [ + 7337, + 0.6762005649717514 + ], + "876": [ + 7346, + 0.6762005649717514 + ], + "877": [ + 7347, + 0.5384887005649718 + ], + "878": [ + 7369, + 0.5384887005649718 + ], + "879": [ + 7370, + 0.8576977401129944 + ], + "880": [ + 7379, + 0.8576977401129944 + ], + "881": [ + 7380, + 0.995409604519774 + ], + "882": [ + 7402, + 0.995409604519774 + ], + "883": [ + 7403, + 0.9950564971751412 + ], + "884": [ + 7472, + 0.9950564971751412 + ], + "885": [ + 7473, + 0.9947033898305084 + ], + "886": [ + 7475, + 0.9947033898305084 + ], + "887": [ + 7476, + 0.9943502824858758 + ], + "888": [ + 7510, + 0.9943502824858758 + ], + "889": [ + 7511, + 0.993997175141243 + ], + "890": [ + 7532, + 0.993997175141243 + ], + "891": [ + 7533, + 0.9936440677966102 + ], + "892": [ + 7534, + 0.9936440677966102 + ], + "893": [ + 7535, + 0.9929378531073446 + ], + "894": [ + 7537, + 0.9929378531073446 + ], + "895": [ + 7538, + 0.9918785310734464 + ], + "896": [ + 7540, + 0.9918785310734464 + ], + "897": [ + 7541, + 0.9915254237288136 + ], + "898": [ + 7552, + 0.9915254237288136 + ], + "899": [ + 7553, + 0.990819209039548 + ], + "900": [ + 7556, + 0.990819209039548 + ], + "901": [ + 7557, + 0.9904661016949152 + ], + "902": [ + 7564, + 0.9904661016949152 + ], + "903": [ + 7565, + 0.9901129943502824 + ], + "904": [ + 7580, + 0.9901129943502824 + ], + "905": [ + 7581, + 0.9841101694915254 + ], + "906": [ + 7592, + 0.9841101694915254 + ], + "907": [ + 7593, + 0.9901129943502824 + ], + "908": [ + 7598, + 0.9901129943502824 + ], + "909": [ + 7599, + 0.9897598870056498 + ], + "910": [ + 7600, + 0.9897598870056498 + ], + "911": [ + 7601, + 0.989406779661017 + ], + "912": [ + 7602, + 0.989406779661017 + ], + "913": [ + 7603, + 0.9251412429378532 + ], + "914": [ + 7604, + 0.989406779661017 + ], + "915": [ + 7605, + 0.989406779661017 + ], + "916": [ + 7606, + 0.9890536723163842 + ], + "917": [ + 7608, + 0.9890536723163842 + ], + "918": [ + 7609, + 0.969632768361582 + ], + "919": [ + 7610, + 0.9692796610169492 + ], + "920": [ + 7612, + 0.9692796610169492 + ], + "921": [ + 7613, + 0.9060734463276836 + ], + "922": [ + 7614, + 0.967867231638418 + ], + "923": [ + 7615, + 0.967867231638418 + ], + "924": [ + 7616, + 0.9491525423728814 + ], + "925": [ + 7617, + 0.9427966101694916 + ], + "926": [ + 7618, + 0.9442090395480226 + ], + "927": [ + 7619, + 0.10875706214689262 + ], + "928": [ + 7625, + 0.10875706214689262 + ], + "929": [ + 7626, + 0.08368644067796616 + ], + "930": [ + 7627, + 0.10875706214689262 + ], + "931": [ + 7628, + 0.961864406779661 + ], + "932": [ + 7629, + 0.961864406779661 + ], + "933": [ + 7630, + 0.003531073446327637 + ], + "934": [ + 7632, + 0.003531073446327637 + ], + "935": [ + 7633, + 0.0028248587570621764 + ], + "936": [ + 7637, + 0.0028248587570621764 + ], + "937": [ + 7638, + 0.0031779661016949623 + ], + "938": [ + 7640, + 0.0031779661016949623 + ], + "939": [ + 7641, + 0.12994350282485878 + ], + "940": [ + 7642, + 0.12994350282485878 + ], + "941": [ + 7643, + 0.21115819209039544 + ], + "942": [ + 7644, + 0.28954802259887 + ], + "943": [ + 7646, + 0.28954802259887 + ], + "944": [ + 7647, + 0.2902542372881356 + ], + "945": [ + 7649, + 0.2902542372881356 + ], + "946": [ + 7650, + 0.2899011299435028 + ], + "947": [ + 7651, + 0.9699858757062146 + ], + "948": [ + 7652, + 0.9636299435028248 + ], + "949": [ + 7653, + 0.9636299435028248 + ], + "950": [ + 7654, + 0.963276836158192 + ], + "951": [ + 7655, + 0.963276836158192 + ], + "952": [ + 7656, + 0.9629237288135594 + ], + "953": [ + 7657, + 0.9307909604519774 + ], + "954": [ + 7658, + 0.881002824858757 + ], + "955": [ + 7659, + 0.8873587570621468 + ], + "956": [ + 7660, + 0.8877118644067796 + ], + "957": [ + 7661, + 0.926906779661017 + ], + "958": [ + 7662, + 0.922316384180791 + ], + "959": [ + 7663, + 0.9226694915254238 + ], + "960": [ + 7664, + 0.9120762711864406 + ], + "961": [ + 7665, + 0.9173728813559322 + ], + "962": [ + 7666, + 0.18008474576271183 + ], + "963": [ + 7667, + 0.18008474576271183 + ], + "964": [ + 7668, + 0.18043785310734461 + ], + "965": [ + 7669, + 0.1938559322033898 + ], + "966": [ + 7670, + 0.2189265536723164 + ], + "967": [ + 7671, + 0.11793785310734461 + ], + "968": [ + 7672, + 0.013064971751412413 + ], + "969": [ + 7673, + 0.023658192090395436 + ], + "970": [ + 7676, + 0.023658192090395436 + ], + "971": [ + 7677, + 0.02259887005649719 + ], + "972": [ + 7686, + 0.02259887005649719 + ], + "973": [ + 7687, + 0.021892655367231617 + ], + "974": [ + 7696, + 0.021892655367231617 + ], + "975": [ + 7697, + 0.003884180790960423 + ], + "976": [ + 7698, + 0.017655367231638408 + ], + "977": [ + 7699, + 0.8601694915254238 + ], + "978": [ + 7700, + 0.9781073446327684 + ], + "979": [ + 7701, + 0.9791666666666666 + ], + "980": [ + 7702, + 0.975635593220339 + ], + "981": [ + 7703, + 0.905367231638418 + ], + "982": [ + 7704, + 0.9124293785310734 + ], + "983": [ + 7705, + 0.9110169491525424 + ], + "984": [ + 7706, + 0.9124293785310734 + ], + "985": [ + 7707, + 0.03919491525423724 + ], + "986": [ + 7708, + 0.0003531073446327859 + ], + "987": [ + 7721, + 0.0003531073446327859 + ], + "988": [ + 7722, + 0.04060734463276838 + ], + "989": [ + 7723, + 0.9805790960451978 + ], + "990": [ + 7724, + 0.9805790960451978 + ], + "991": [ + 7725, + 0.9781073446327684 + ], + "992": [ + 7726, + 0.9774011299435028 + ], + "993": [ + 7727, + 0.9777542372881356 + ], + "994": [ + 7728, + 0.97704802259887 + ], + "995": [ + 7729, + 0.972457627118644 + ], + "996": [ + 7730, + 0.972457627118644 + ], + "997": [ + 7731, + 0.9706920903954802 + ], + "998": [ + 7732, + 0.9759887005649718 + ], + "999": [ + 7733, + 0.9516242937853108 + ], + "1000": [ + 7734, + 0.955861581920904 + ], + "1001": [ + 7735, + 0.9608050847457628 + ], + "1002": [ + 7736, + 0.9579802259887006 + ], + "1003": [ + 7737, + 0.8802966101694916 + ], + "1004": [ + 7738, + 0.7390536723163842 + ], + "1005": [ + 7739, + 0.6373587570621468 + ], + "1006": [ + 7740, + 0.7337570621468927 + ], + "1007": [ + 7741, + 0.7337570621468927 + ], + "1008": [ + 7742, + 0.18043785310734461 + ], + "1009": [ + 7743, + 0.178319209039548 + ], + "1010": [ + 7744, + 0.163135593220339 + ], + "1011": [ + 7745, + 0.07697740112994356 + ], + "1012": [ + 7746, + 0.07556497175141241 + ], + "1013": [ + 7747, + 0.06956214689265539 + ], + "1014": [ + 7748, + 0.06956214689265539 + ], + "1015": [ + 7749, + 0.06779661016949157 + ], + "1016": [ + 7750, + 0.1652542372881356 + ], + "1017": [ + 7751, + 0.1652542372881356 + ], + "1018": [ + 7752, + 0.26871468926553677 + ], + "1019": [ + 7755, + 0.26871468926553677 + ], + "1020": [ + 7756, + 0.0646186440677966 + ], + "1021": [ + 7759, + 0.0646186440677966 + ], + "1022": [ + 7760, + 0.0625 + ], + "1023": [ + 7761, + 0.06497175141242939 + ], + "1024": [ + 7762, + 0.06497175141242939 + ], + "1025": [ + 7763, + 0.0646186440677966 + ], + "1026": [ + 7765, + 0.0646186440677966 + ], + "1027": [ + 7766, + 0.06497175141242939 + ], + "1028": [ + 7774, + 0.06497175141242939 + ], + "1029": [ + 7775, + 0.06603107344632764 + ], + "1030": [ + 7776, + 0.06603107344632764 + ], + "1031": [ + 7777, + 0.06744350282485878 + ], + "1032": [ + 7778, + 0.08192090395480223 + ], + "1033": [ + 7783, + 0.08192090395480223 + ], + "1034": [ + 7784, + 0.07662429378531077 + ], + "1035": [ + 7786, + 0.07662429378531077 + ], + "1036": [ + 7787, + 0.07980225988700562 + ], + "1037": [ + 7788, + 0.08298022598870058 + ], + "1038": [ + 7789, + 0.0003531073446327859 + ], + "1039": [ + 7790, + 0.0003531073446327859 + ], + "1040": [ + 7791, + 0.08227401129943501 + ], + "1041": [ + 7793, + 0.08227401129943501 + ], + "1042": [ + 7794, + 0.0805084745762712 + ], + "1043": [ + 7797, + 0.0805084745762712 + ], + "1044": [ + 7798, + 0.08086158192090398 + ], + "1045": [ + 7800, + 0.08086158192090398 + ], + "1046": [ + 7801, + 0.08156779661016944 + ], + "1047": [ + 7802, + 0.8347457627118644 + ], + "1048": [ + 7803, + 0.836864406779661 + ], + "1049": [ + 7804, + 0.8350988700564972 + ], + "1050": [ + 7805, + 0.8192090395480226 + ], + "1051": [ + 7806, + 0.8192090395480226 + ], + "1052": [ + 7807, + 0.8379237288135593 + ], + "1053": [ + 7808, + 0.8432203389830508 + ], + "1054": [ + 7809, + 0.8682909604519774 + ], + "1055": [ + 7810, + 0.8682909604519774 + ], + "1056": [ + 7811, + 0.8686440677966102 + ], + "1057": [ + 7812, + 0.8820621468926554 + ], + "1058": [ + 7813, + 0.8824152542372882 + ], + "1059": [ + 7814, + 0.8820621468926554 + ], + "1060": [ + 7816, + 0.8820621468926554 + ], + "1061": [ + 7817, + 0.8824152542372882 + ], + "1062": [ + 7818, + 0.8873587570621468 + ], + "1063": [ + 7819, + 0.8930084745762712 + ], + "1064": [ + 7820, + 0.9057203389830508 + ], + "1065": [ + 7821, + 0.9184322033898304 + ], + "1066": [ + 7822, + 0.9180790960451978 + ], + "1067": [ + 7823, + 0.9159604519774012 + ], + "1068": [ + 7824, + 0.21292372881355937 + ], + "1069": [ + 7825, + 0.21292372881355937 + ], + "1070": [ + 7826, + 0.21115819209039544 + ], + "1071": [ + 7827, + 0.20939265536723162 + ], + "1072": [ + 7828, + 0.19314971751412424 + ], + "1073": [ + 7829, + 0.13312146892655363 + ], + "1074": [ + 7830, + 0.026483050847457612 + ], + "1075": [ + 7831, + 0.02577683615819204 + ], + "1076": [ + 7834, + 0.02577683615819204 + ], + "1077": [ + 7835, + 0.02507062146892658 + ], + "1078": [ + 7836, + 0.021186440677966156 + ], + "1079": [ + 7838, + 0.021186440677966156 + ], + "1080": [ + 7839, + 0.05826271186440679 + ], + "1081": [ + 7840, + 0.06144067796610164 + ], + "1082": [ + 7841, + 0.09074858757062143 + ], + "1083": [ + 7842, + 0.9043079096045198 + ], + "1084": [ + 7843, + 0.9639830508474576 + ], + "1085": [ + 7844, + 0.9661016949152542 + ], + "1086": [ + 7845, + 0.8908898305084746 + ], + "1087": [ + 7846, + 0.8912429378531074 + ], + "1088": [ + 7847, + 0.9795197740112994 + ], + "1089": [ + 7848, + 0.9858757062146892 + ], + "1090": [ + 7850, + 0.9858757062146892 + ], + "1091": [ + 7851, + 0.9855225988700564 + ], + "1092": [ + 7852, + 0.0014124293785310327 + ], + "1093": [ + 7854, + 0.0014124293785310327 + ], + "1094": [ + 7855, + 0.0017655367231638186 + ], + "1095": [ + 7858, + 0.0017655367231638186 + ], + "1096": [ + 7859, + 0.0024717514124293904 + ], + "1097": [ + 7862, + 0.0024717514124293904 + ], + "1098": [ + 7863, + 0.9064265536723164 + ], + "1099": [ + 7864, + 0.9057203389830508 + ], + "1100": [ + 7865, + 0.9057203389830508 + ], + "1101": [ + 7866, + 0.9050141242937852 + ], + "1102": [ + 7867, + 0.9050141242937852 + ], + "1103": [ + 7868, + 0.10875706214689262 + ], + "1104": [ + 7869, + 0.10663841807909602 + ], + "1105": [ + 7870, + 0.09039548022598876 + ], + "1106": [ + 7872, + 0.09039548022598876 + ], + "1107": [ + 7873, + 0.08862994350282483 + ], + "1108": [ + 7874, + 0.09004237288135597 + ], + "1109": [ + 7875, + 0.09004237288135597 + ], + "1110": [ + 7876, + 0.09251412429378536 + ], + "1111": [ + 7877, + 0.09251412429378536 + ], + "1112": [ + 7878, + 0.09322033898305082 + ], + "1113": [ + 7879, + 0.09392655367231639 + ], + "1114": [ + 7880, + 0.888771186440678 + ], + "1115": [ + 7881, + 0.8898305084745762 + ], + "1116": [ + 7882, + 0.832274011299435 + ], + "1117": [ + 7883, + 0.8329802259887006 + ], + "1118": [ + 7884, + 0.9120762711864406 + ], + "1119": [ + 7888, + 0.9120762711864406 + ], + "1120": [ + 7889, + 0.9855225988700564 + ], + "1121": [ + 7890, + 0.9855225988700564 + ], + "1122": [ + 7891, + 0.9851694915254238 + ], + "1123": [ + 7892, + 0.9851694915254238 + ], + "1124": [ + 7893, + 0.9855225988700564 + ], + "1125": [ + 7895, + 0.9855225988700564 + ], + "1126": [ + 7896, + 0.5331920903954802 + ], + "1127": [ + 7897, + 0.5314265536723164 + ], + "1128": [ + 7898, + 0.5314265536723164 + ], + "1129": [ + 7899, + 0.21080508474576276 + ], + "1130": [ + 7900, + 0.20409604519774016 + ], + "1131": [ + 7901, + 0.2005649717514124 + ], + "1132": [ + 7902, + 0.12111581920903958 + ], + "1133": [ + 7905, + 0.12111581920903958 + ], + "1134": [ + 7906, + 0.11758474576271183 + ], + "1135": [ + 7907, + 0.09851694915254239 + ], + "1136": [ + 7909, + 0.09851694915254239 + ], + "1137": [ + 7910, + 0.09533898305084743 + ], + "1138": [ + 7912, + 0.09533898305084743 + ], + "1139": [ + 7913, + 0.09851694915254239 + ], + "1140": [ + 7914, + 0.0201271186440678 + ], + "1141": [ + 7915, + 0.02330508474576276 + ], + "1142": [ + 7916, + 0.02330508474576276 + ], + "1143": [ + 7917, + 0.023658192090395436 + ], + "1144": [ + 7918, + 0.024364406779661008 + ], + "1145": [ + 7919, + 0.024364406779661008 + ], + "1146": [ + 7920, + 0.04307909604519777 + ], + "1147": [ + 7921, + 0.04307909604519777 + ], + "1148": [ + 7922, + 0.04343220338983056 + ], + "1149": [ + 7923, + 0.04343220338983056 + ], + "1150": [ + 7924, + 0.04307909604519777 + ], + "1151": [ + 7925, + 0.04307909604519777 + ], + "1152": [ + 7926, + 0.76659604519774 + ], + "1153": [ + 7927, + 0.7100988700564972 + ], + "1154": [ + 7928, + 0.7115112994350282 + ], + "1155": [ + 7929, + 0.8117937853107344 + ], + "1156": [ + 7930, + 0.8117937853107344 + ], + "1157": [ + 7931, + 0.8114406779661016 + ], + "1158": [ + 7932, + 0.0010593220338983578 + ], + "1159": [ + 7933, + 0.0003531073446327859 + ], + "1160": [ + 7936, + 0.0003531073446327859 + ], + "1161": [ + 7937, + 0.8990112994350282 + ], + "1162": [ + 7938, + 0.9021892655367232 + ], + "1163": [ + 7939, + 0.9205508474576272 + ], + "1164": [ + 7940, + 0.922316384180791 + ], + "1165": [ + 7941, + 0.9170197740112994 + ], + "1166": [ + 7942, + 0.917725988700565 + ], + "1167": [ + 7944, + 0.917725988700565 + ], + "1168": [ + 7945, + 0.9170197740112994 + ], + "1169": [ + 7946, + 0.9170197740112994 + ], + "1170": [ + 7947, + 0.0024717514124293904 + ], + "1171": [ + 7948, + 0.0031779661016949623 + ], + "1172": [ + 7949, + 0.0031779661016949623 + ], + "1173": [ + 7950, + 0.11087570621468923 + ], + "1174": [ + 7952, + 0.11087570621468923 + ], + "1175": [ + 7953, + 0.8453389830508474 + ], + "1176": [ + 7955, + 0.8453389830508474 + ], + "1177": [ + 7956, + 0.9194915254237288 + ], + "1178": [ + 7958, + 0.9194915254237288 + ], + "1179": [ + 7959, + 0.9251412429378532 + ], + "1180": [ + 7960, + 0.9219632768361582 + ], + "1181": [ + 7961, + 0.9219632768361582 + ], + "1182": [ + 7962, + 0.9004237288135594 + ], + "1183": [ + 7963, + 0.8997175141242938 + ], + "1184": [ + 7964, + 0.899364406779661 + ], + "1185": [ + 7965, + 0.2076271186440678 + ], + "1186": [ + 7966, + 0.2055084745762712 + ], + "1187": [ + 7967, + 0.11122881355932202 + ], + "1188": [ + 7968, + 0.09710451977401124 + ], + "1189": [ + 7969, + 0.11087570621468923 + ], + "1190": [ + 7970, + 0.11299435028248583 + ], + "1191": [ + 7971, + 0.11475988700564976 + ], + "1192": [ + 7973, + 0.11475988700564976 + ], + "1193": [ + 7974, + 0.20480225988700562 + ], + "1194": [ + 7975, + 0.768361581920904 + ], + "1195": [ + 7976, + 0.8894774011299436 + ], + "1196": [ + 7977, + 0.8894774011299436 + ], + "1197": [ + 7978, + 0.11052259887005644 + ], + "1198": [ + 7979, + 0.10840395480225984 + ], + "1199": [ + 7980, + 0.10840395480225984 + ], + "1200": [ + 7981, + 0.11016949152542377 + ], + "1201": [ + 7982, + 0.09216101694915257 + ], + "1202": [ + 7983, + 0.11228813559322037 + ], + "1203": [ + 7984, + 0.1182909604519774 + ], + "1204": [ + 7985, + 0.1182909604519774 + ], + "1205": [ + 7986, + 0.8891242937853108 + ], + "1206": [ + 7987, + 0.8912429378531074 + ], + "1207": [ + 7988, + 0.8834745762711864 + ], + "1208": [ + 7989, + 0.8834745762711864 + ], + "1209": [ + 7990, + 0.8817090395480226 + ], + "1210": [ + 7991, + 0.884180790960452 + ], + "1211": [ + 7992, + 0.884180790960452 + ], + "1212": [ + 7993, + 0.8838276836158192 + ], + "1213": [ + 7994, + 0.884180790960452 + ], + "1214": [ + 7995, + 0.13276836158192096 + ], + "1215": [ + 7996, + 0.13276836158192096 + ], + "1216": [ + 7997, + 0.004943502824858781 + ], + "1217": [ + 7998, + 0.004943502824858781 + ], + "1218": [ + 7999, + 0.11016949152542377 + ], + "1219": [ + 8000, + 0.004943502824858781 + ], + "1220": [ + 8001, + 0.11581920903954801 + ], + "1221": [ + 8002, + 0.11581920903954801 + ], + "1222": [ + 8003, + 0.7842514124293786 + ], + "1223": [ + 8004, + 0.7793079096045198 + ], + "1224": [ + 8005, + 0.7782485875706214 + ], + "1225": [ + 8006, + 0.7609463276836158 + ], + "1226": [ + 8007, + 0.7676553672316384 + ], + "1227": [ + 8008, + 0.6659604519774012 + ], + "1228": [ + 8009, + 0.6638418079096045 + ], + "1229": [ + 8010, + 0.663135593220339 + ], + "1230": [ + 8011, + 0.659957627118644 + ], + "1231": [ + 8012, + 0.6769067796610169 + ], + "1232": [ + 8013, + 0.6769067796610169 + ], + "1233": [ + 8014, + 0.6772598870056497 + ], + "1234": [ + 8016, + 0.6772598870056497 + ], + "1235": [ + 8017, + 0.6776129943502824 + ], + "1236": [ + 8018, + 0.6776129943502824 + ], + "1237": [ + 8019, + 0.6956214689265536 + ], + "1238": [ + 8020, + 0.6963276836158192 + ], + "1239": [ + 8021, + 0.6963276836158192 + ], + "1240": [ + 8022, + 0.6987994350282486 + ], + "1241": [ + 8023, + 0.6987994350282486 + ], + "1242": [ + 8024, + 0.6867937853107344 + ], + "1243": [ + 8025, + 0.6853813559322034 + ], + "1244": [ + 8026, + 0.6853813559322034 + ], + "1245": [ + 8027, + 0.7888418079096045 + ], + "1246": [ + 8028, + 0.7704802259887006 + ], + "1247": [ + 8029, + 0.768361581920904 + ], + "1248": [ + 8030, + 0.6684322033898304 + ], + "1249": [ + 8031, + 0.6687853107344632 + ], + "1250": [ + 8032, + 0.6687853107344632 + ], + "1251": [ + 8033, + 0.7468220338983051 + ], + "1252": [ + 8034, + 0.7471751412429379 + ], + "1253": [ + 8035, + 0.7478813559322034 + ], + "1254": [ + 8036, + 0.8478107344632768 + ], + "1255": [ + 8037, + 0.8478107344632768 + ], + "1256": [ + 8038, + 0.8647598870056497 + ], + "1257": [ + 8039, + 0.9491525423728814 + ], + "1258": [ + 8040, + 0.9763418079096046 + ], + "1259": [ + 8041, + 0.022245762711864403 + ], + "1260": [ + 8042, + 0.0201271186440678 + ], + "1261": [ + 8043, + 0.020480225988700584 + ], + "1262": [ + 8049, + 0.020480225988700584 + ], + "1263": [ + 8050, + 0.12817796610169496 + ], + "1264": [ + 8053, + 0.12817796610169496 + ], + "1265": [ + 8054, + 0.12782485875706218 + ], + "1266": [ + 8055, + 0.125 + ], + "1267": [ + 8056, + 0.12464689265536721 + ], + "1268": [ + 8057, + 0.1271186440677966 + ], + "1269": [ + 8058, + 0.129590395480226 + ], + "1270": [ + 8059, + 0.9830508474576272 + ], + "1271": [ + 8060, + 0.9826977401129944 + ], + "1272": [ + 8061, + 0.9830508474576272 + ], + "1273": [ + 8065, + 0.9830508474576272 + ], + "1274": [ + 8066, + 0.006002824858757028 + ], + "1275": [ + 8068, + 0.006002824858757028 + ], + "1276": [ + 8069, + 0.004943502824858781 + ], + "1277": [ + 8084, + 0.004943502824858781 + ], + "1278": [ + 8085, + 0.11228813559322037 + ], + "1279": [ + 8086, + 0.09922316384180796 + ], + "1280": [ + 8087, + 0.09922316384180796 + ], + "1281": [ + 8088, + 0.008121468926553632 + ], + "1282": [ + 8089, + 0.005649717514124242 + ], + "1283": [ + 8090, + 0.004943502824858781 + ], + "1284": [ + 8094, + 0.004943502824858781 + ], + "1285": [ + 8095, + 0.005649717514124242 + ], + "1286": [ + 8096, + 0.005649717514124242 + ], + "1287": [ + 8097, + 0.008121468926553632 + ], + "1288": [ + 8098, + 0.008121468926553632 + ], + "1289": [ + 8099, + 0.008474576271186418 + ], + "1290": [ + 8101, + 0.008474576271186418 + ], + "1291": [ + 8102, + 0.09957627118644063 + ], + "1292": [ + 8104, + 0.09957627118644063 + ], + "1293": [ + 8105, + 0.971045197740113 + ], + "1294": [ + 8106, + 0.9841101694915254 + ], + "1295": [ + 8107, + 0.9844632768361582 + ], + "1296": [ + 8113, + 0.9844632768361582 + ], + "1297": [ + 8114, + 0.9841101694915254 + ], + "1298": [ + 8122, + 0.9841101694915254 + ], + "1299": [ + 8123, + 0.9798728813559322 + ], + "1300": [ + 8124, + 0.9798728813559322 + ], + "1301": [ + 8125, + 0.9795197740112994 + ], + "1302": [ + 8126, + 0.9837570621468926 + ], + "1303": [ + 8132, + 0.9837570621468926 + ], + "1304": [ + 8133, + 0.9791666666666666 + ], + "1305": [ + 8134, + 0.9661016949152542 + ], + "1306": [ + 8135, + 0.8923022598870056 + ], + "1307": [ + 8136, + 0.8958333333333334 + ], + "1308": [ + 8137, + 0.9088983050847458 + ], + "1309": [ + 8138, + 0.9826977401129944 + ], + "1310": [ + 8139, + 0.9826977401129944 + ], + "1311": [ + 8140, + 0.981638418079096 + ], + "1312": [ + 8141, + 0.9812853107344632 + ], + "1313": [ + 8142, + 0.981638418079096 + ], + "1314": [ + 8143, + 0.9795197740112994 + ], + "1315": [ + 8149, + 0.9795197740112994 + ], + "1316": [ + 8150, + 0.9798728813559322 + ], + "1317": [ + 8151, + 0.980225988700565 + ], + "1318": [ + 8152, + 0.9798728813559322 + ], + "1319": [ + 8153, + 0.9798728813559322 + ], + "1320": [ + 8154, + 0.9795197740112994 + ], + "1321": [ + 8157, + 0.9795197740112994 + ], + "1322": [ + 8158, + 0.0003531073446327859 + ], + "1323": [ + 8159, + 0.0003531073446327859 + ], + "1324": [ + 8160, + 0.0007062146892655718 + ], + "1325": [ + 8161, + 0.9795197740112994 + ], + "1326": [ + 8162, + 0.9791666666666666 + ], + "1327": [ + 8163, + 0.9791666666666666 + ], + "1328": [ + 8164, + 0.9784604519774012 + ], + "1329": [ + 8176, + 0.9784604519774012 + ], + "1330": [ + 8177, + 0.9781073446327684 + ], + "1331": [ + 8178, + 0.9777542372881356 + ], + "1332": [ + 8179, + 0.9777542372881356 + ], + "1333": [ + 8180, + 0.9781073446327684 + ], + "1334": [ + 8182, + 0.9781073446327684 + ], + "1335": [ + 8183, + 0.9777542372881356 + ], + "1336": [ + 8184, + 0.9781073446327684 + ], + "1337": [ + 8185, + 0.9812853107344632 + ], + "1338": [ + 8187, + 0.9812853107344632 + ], + "1339": [ + 8188, + 0.9809322033898306 + ], + "1340": [ + 8189, + 0.9812853107344632 + ], + "1341": [ + 8195, + 0.9812853107344632 + ], + "1342": [ + 8196, + 0.981638418079096 + ], + "1343": [ + 8203, + 0.981638418079096 + ], + "1344": [ + 8204, + 0.9812853107344632 + ], + "1345": [ + 8207, + 0.9812853107344632 + ], + "1346": [ + 8208, + 0.9809322033898306 + ], + "1347": [ + 8210, + 0.9809322033898306 + ], + "1348": [ + 8211, + 0.0017655367231638186 + ], + "1349": [ + 8213, + 0.0017655367231638186 + ], + "1350": [ + 8214, + 0.978813559322034 + ], + "1351": [ + 8216, + 0.978813559322034 + ], + "1352": [ + 8217, + 0.861228813559322 + ], + "1353": [ + 8218, + 0.0003531073446327859 + ], + "1354": [ + 8247, + 0.0003531073446327859 + ], + "1355": [ + 8248, + 0.861228813559322 + ], + "1356": [ + 8249, + 0.861228813559322 + ], + "1357": [ + 8250, + 0.980225988700565 + ], + "1358": [ + 8253, + 0.980225988700565 + ], + "1359": [ + 8254, + 0.0003531073446327859 + ], + "1360": [ + 8255, + 0.0003531073446327859 + ], + "1361": [ + 8256, + 0.0010593220338983578 + ], + "1362": [ + 8257, + 0.9805790960451978 + ], + "1363": [ + 8264, + 0.9805790960451978 + ], + "1364": [ + 8265, + 0.980225988700565 + ], + "1365": [ + 8266, + 0.980225988700565 + ], + "1366": [ + 8267, + 0.9798728813559322 + ], + "1367": [ + 8271, + 0.9798728813559322 + ], + "1368": [ + 8272, + 0.9766949152542372 + ], + "1369": [ + 8276, + 0.9766949152542372 + ], + "1370": [ + 8277, + 0.9759887005649718 + ], + "1371": [ + 8278, + 0.9752824858757062 + ], + "1372": [ + 8280, + 0.9752824858757062 + ], + "1373": [ + 8281, + 0.9749293785310734 + ], + "1374": [ + 8282, + 0.9752824858757062 + ], + "1375": [ + 8283, + 0.9749293785310734 + ], + "1376": [ + 8286, + 0.9749293785310734 + ], + "1377": [ + 8287, + 0.9745762711864406 + ], + "1378": [ + 8288, + 0.0003531073446327859 + ], + "1379": [ + 8289, + 0.974223163841808 + ], + "1380": [ + 8290, + 0.9738700564971752 + ], + "1381": [ + 8294, + 0.9738700564971752 + ], + "1382": [ + 8295, + 0.9713983050847458 + ], + "1383": [ + 8296, + 0.9703389830508474 + ], + "1384": [ + 8297, + 0.9703389830508474 + ], + "1385": [ + 8298, + 0.9639830508474576 + ], + "1386": [ + 8299, + 0.9636299435028248 + ], + "1387": [ + 8300, + 0.963276836158192 + ], + "1388": [ + 8301, + 0.9625706214689266 + ], + "1389": [ + 8302, + 0.9385593220338984 + ], + "1390": [ + 8303, + 0.9385593220338984 + ], + "1391": [ + 8304, + 0.9378531073446328 + ], + "1392": [ + 8305, + 0.936087570621469 + ], + "1393": [ + 8306, + 0.0003531073446327859 + ], + "1394": [ + 8317, + 0.0003531073446327859 + ], + "1395": [ + 8318, + 0.936087570621469 + ], + "1396": [ + 8319, + 0.9357344632768362 + ], + "1397": [ + 8322, + 0.9357344632768362 + ], + "1398": [ + 8323, + 0.9353813559322034 + ], + "1399": [ + 8324, + 0.9353813559322034 + ], + "1400": [ + 8325, + 0.934322033898305 + ], + "1401": [ + 8326, + 0.9339689265536724 + ], + "1402": [ + 8327, + 0.9332627118644068 + ], + "1403": [ + 8329, + 0.9332627118644068 + ], + "1404": [ + 8330, + 0.9322033898305084 + ], + "1405": [ + 8331, + 0.9311440677966102 + ], + "1406": [ + 8334, + 0.9311440677966102 + ], + "1407": [ + 8335, + 0.9304378531073446 + ], + "1408": [ + 8336, + 0.9297316384180792 + ], + "1409": [ + 8337, + 0.9297316384180792 + ], + "1410": [ + 8338, + 0.928319209039548 + ], + "1411": [ + 8339, + 0.9279661016949152 + ], + "1412": [ + 8340, + 0.9279661016949152 + ], + "1413": [ + 8341, + 0.9276129943502824 + ], + "1414": [ + 8342, + 0.9262005649717514 + ], + "1415": [ + 8343, + 0.9251412429378532 + ], + "1416": [ + 8344, + 0.9247881355932204 + ], + "1417": [ + 8345, + 0.9247881355932204 + ], + "1418": [ + 8346, + 0.9240819209039548 + ], + "1419": [ + 8347, + 0.9230225988700564 + ], + "1420": [ + 8348, + 0.9216101694915254 + ], + "1421": [ + 8349, + 0.9216101694915254 + ], + "1422": [ + 8350, + 0.9212570621468926 + ], + "1423": [ + 8351, + 0.9205508474576272 + ], + "1424": [ + 8352, + 0.9198446327683616 + ], + "1425": [ + 8353, + 0.9194915254237288 + ], + "1426": [ + 8354, + 0.9194915254237288 + ], + "1427": [ + 8355, + 0.9184322033898304 + ], + "1428": [ + 8356, + 0.9180790960451978 + ], + "1429": [ + 8358, + 0.9180790960451978 + ], + "1430": [ + 8359, + 0.917725988700565 + ], + "1431": [ + 8360, + 0.9173728813559322 + ], + "1432": [ + 8361, + 0.916313559322034 + ], + "1433": [ + 8362, + 0.916313559322034 + ], + "1434": [ + 8363, + 0.9159604519774012 + ], + "1435": [ + 8364, + 0.91454802259887 + ], + "1436": [ + 8365, + 0.9138418079096046 + ], + "1437": [ + 8366, + 0.9127824858757062 + ], + "1438": [ + 8367, + 0.911723163841808 + ], + "1439": [ + 8368, + 0.9110169491525424 + ], + "1440": [ + 8369, + 0.9096045197740112 + ], + "1441": [ + 8370, + 0.9060734463276836 + ], + "1442": [ + 8371, + 0.9043079096045198 + ], + "1443": [ + 8372, + 0.902542372881356 + ], + "1444": [ + 8373, + 0.0007062146892655718 + ], + "1445": [ + 8380, + 0.0007062146892655718 + ], + "1446": [ + 8381, + 0.89795197740113 + ], + "1447": [ + 8382, + 0.8965395480225988 + ], + "1448": [ + 8383, + 0.8912429378531074 + ], + "1449": [ + 8384, + 0.8870056497175142 + ], + "1450": [ + 8385, + 0.8852401129943502 + ], + "1451": [ + 8386, + 0.8831214689265536 + ], + "1452": [ + 8387, + 0.8813559322033898 + ], + "1453": [ + 8388, + 0.18608757062146897 + ], + "1454": [ + 8389, + 0.1853813559322034 + ], + "1455": [ + 8390, + 0.6197033898305084 + ], + "1456": [ + 8391, + 0.0007062146892655718 + ], + "1457": [ + 8401, + 0.0007062146892655718 + ], + "1458": [ + 8402, + 0.615819209039548 + ], + "1459": [ + 8403, + 0.6126412429378532 + ], + "1460": [ + 8404, + 0.6101694915254237 + ], + "1461": [ + 8405, + 0.60204802259887 + ], + "1462": [ + 8406, + 0.5978107344632768 + ], + "1463": [ + 8407, + 0.596045197740113 + ], + "1464": [ + 8408, + 0.588276836158192 + ], + "1465": [ + 8409, + 0.5628531073446328 + ], + "1466": [ + 8410, + 0.3905367231638418 + ], + "1467": [ + 8411, + 0.5444915254237288 + ], + "1468": [ + 8412, + 0.016242937853107375 + ], + "1469": [ + 8413, + 0.014830508474576232 + ], + "1470": [ + 8414, + 0.008827683615819204 + ], + "1471": [ + 8415, + 0.008121468926553632 + ], + "1472": [ + 8416, + 0.0003531073446327859 + ], + "1473": [ + 8417, + 0.0007062146892655718 + ], + "1474": [ + 8418, + 0.0014124293785310327 + ], + "1475": [ + 8419, + 0.0014124293785310327 + ], + "1476": [ + 8420, + 0.0031779661016949623 + ], + "1477": [ + 8421, + 0.007768361581920957 + ], + "1478": [ + 8422, + 0.009887005649717562 + ], + "1479": [ + 8423, + 0.3545197740112994 + ], + "1480": [ + 8424, + 0.003531073446327637 + ], + "1481": [ + 8425, + 0.350635593220339 + ], + "1482": [ + 8426, + 0.0003531073446327859 + ], + "1483": [ + 8427, + 0.5561440677966102 + ], + "1484": [ + 8428, + 0.30261299435028244 + ], + "1485": [ + 8429, + 0.46998587570621464 + ], + "1486": [ + 8430, + 0.0014124293785310327 + ], + "1487": [ + 8431, + 0.46115819209039544 + ], + "1488": [ + 8432, + 0.455861581920904 + ], + "1489": [ + 8433, + 0.44774011299435024 + ], + "1490": [ + 8434, + 0.39865819209039544 + ], + "1491": [ + 8435, + 0.08862994350282483 + ], + "1492": [ + 8436, + 0.07485875706214684 + ], + "1493": [ + 8437, + 0.013418079096045199 + ], + "1494": [ + 8438, + 0.003884180790960423 + ], + "1495": [ + 8439, + 0.01165254237288138 + ], + "1496": [ + 8440, + 0.3237994350282486 + ], + "1497": [ + 8441, + 0.31355932203389836 + ], + "1498": [ + 8442, + 0.07309322033898302 + ], + "1499": [ + 8443, + 0.06532485875706218 + ], + "1500": [ + 8444, + 0.012358757062146841 + ], + "1501": [ + 8445, + 0.012358757062146841 + ], + "1502": [ + 8446, + 0.07238700564971756 + ], + "1503": [ + 8447, + 0.2747175141242938 + ], + "1504": [ + 8448, + 0.06320621468926557 + ], + "1505": [ + 8449, + 0.012711864406779627 + ], + "1506": [ + 8450, + 0.011299435028248594 + ], + "1507": [ + 8451, + 0.009533898305084776 + ], + "1508": [ + 8453, + 0.009533898305084776 + ], + "1509": [ + 8454, + 0.33580508474576276 + ], + "1510": [ + 8455, + 0.40713276836158196 + ], + "1511": [ + 8456, + 0.4057203389830508 + ], + "1512": [ + 8457, + 0.39795197740113 + ], + "1513": [ + 8458, + 0.3478107344632768 + ], + "1514": [ + 8459, + 0.254590395480226 + ], + "1515": [ + 8460, + 0.1161723163841808 + ], + "1516": [ + 8461, + 0.09781073446327682 + ], + "1517": [ + 8462, + 0.017655367231638408 + ], + "1518": [ + 8463, + 0.015536723163841804 + ], + "1519": [ + 8464, + 0.004237288135593209 + ], + "1520": [ + 8465, + 0.003531073446327637 + ], + "1521": [ + 8466, + 0.003531073446327637 + ], + "1522": [ + 8467, + 0.0007062146892655718 + ], + "1523": [ + 8468, + 0.13665254237288138 + ], + "1524": [ + 8469, + 0.2796610169491526 + ], + "1525": [ + 8470, + 0.0007062146892655718 + ], + "1526": [ + 8471, + 0.4957627118644068 + ], + "1527": [ + 8472, + 0.4399717514124294 + ], + "1528": [ + 8473, + 0.15007062146892658 + ], + "1529": [ + 8474, + 0.15324858757062143 + ], + "1530": [ + 8475, + 0.1313559322033898 + ], + "1531": [ + 8476, + 0.1514830508474576 + ], + "1532": [ + 8477, + 0.2768361581920904 + ], + "1533": [ + 8478, + 0.11864406779661019 + ], + "1534": [ + 8479, + 0.044491525423728806 + ], + "1535": [ + 8480, + 0.0423728813559322 + ], + "1536": [ + 8481, + 0.03848870056497178 + ], + "1537": [ + 8482, + 0.1649011299435028 + ], + "1538": [ + 8483, + 0.12888418079096042 + ], + "1539": [ + 8484, + 0.10875706214689262 + ], + "1540": [ + 8485, + 0.15501412429378536 + ], + "1541": [ + 8486, + 0.4805790960451978 + ], + "1542": [ + 8487, + 0.4336158192090396 + ], + "1543": [ + 8488, + 0.4706920903954802 + ], + "1544": [ + 8489, + 0.46998587570621464 + ], + "1545": [ + 8490, + 0.46574858757062143 + ], + "1546": [ + 8491, + 0.19032485875706218 + ], + "1547": [ + 8492, + 0.17019774011299438 + ], + "1548": [ + 8493, + 0.0010593220338983578 + ], + "1549": [ + 8494, + 0.13700564971751417 + ], + "1550": [ + 8495, + 0.12994350282485878 + ], + "1551": [ + 8496, + 0.12817796610169496 + ], + "1552": [ + 8497, + 0.12323446327683618 + ], + "1553": [ + 8498, + 0.13276836158192096 + ], + "1554": [ + 8499, + 0.2662429378531074 + ], + "1555": [ + 8500, + 0.13241525423728817 + ], + "1556": [ + 8501, + 0.08121468926553677 + ], + "1557": [ + 8502, + 0.08227401129943501 + ], + "1558": [ + 8503, + 0.08121468926553677 + ], + "1559": [ + 8504, + 0.007062146892655385 + ], + "1560": [ + 8505, + 0.24293785310734461 + ], + "1561": [ + 8506, + 0.27295197740113 + ], + "1562": [ + 8507, + 0.3905367231638418 + ], + "1563": [ + 8508, + 0.39795197740113 + ], + "1564": [ + 8509, + 0.0003531073446327859 + ], + "1565": [ + 8510, + 0.0003531073446327859 + ], + "1566": [ + 8511, + 0.0010593220338983578 + ], + "1567": [ + 8512, + 0.35628531073446323 + ], + "1568": [ + 8513, + 0.35346045197740117 + ], + "1569": [ + 8514, + 0.3774717514124294 + ], + "1570": [ + 8515, + 0.3661723163841808 + ], + "1571": [ + 8516, + 0.35169491525423724 + ], + "1572": [ + 8517, + 0.34922316384180796 + ], + "1573": [ + 8518, + 0.330861581920904 + ], + "1574": [ + 8519, + 0.1317090395480226 + ], + "1575": [ + 8520, + 0.12005649717514122 + ], + "1576": [ + 8521, + 0.11935028248587576 + ] +} \ No newline at end of file diff --git a/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_thermo_pass.json b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_thermo_pass.json new file mode 100644 index 0000000..df46737 --- /dev/null +++ b/primerschemes/norovirus-gii/800/v1.0.0/work/gii.align.mod_thermo_pass.json @@ -0,0 +1,1196 @@ +{ + "F": { + "97": 8, + "100": 7, + "101": 7, + "105": 8, + "106": 8, + "107": 8, + "364": 7, + "365": 7, + "376": 7, + "539": 11, + "556": 7, + "558": 6, + "752": 8, + "753": 9, + "754": 9, + "755": 9, + "756": 11, + "757": 11, + "770": 8, + "919": 8, + "942": 9, + "943": 9, + "944": 9, + "945": 9, + "946": 10, + "947": 10, + "948": 10, + "949": 10, + "950": 10, + "951": 10, + "952": 10, + "953": 10, + "954": 10, + "960": 10, + "961": 10, + "962": 10, + "964": 9, + "965": 9, + "966": 8, + "967": 8, + "968": 8, + "970": 8, + "997": 12, + "1027": 10, + "1028": 10, + "1035": 11, + "1036": 10, + "1037": 10, + "1038": 10, + "1039": 10, + "1040": 10, + "1041": 11, + "1042": 11, + "1044": 11, + "1046": 11, + "1192": 9, + "1193": 8, + "1194": 9, + "1195": 10, + "1196": 10, + "1241": 10, + "1293": 7, + "1294": 7, + "1295": 6, + "1296": 6, + "1298": 6, + "1299": 6, + "1300": 6, + "1301": 6, + "1302": 7, + "1303": 6, + "1304": 6, + "1305": 6, + "1306": 6, + "1331": 9, + "1332": 10, + "1333": 10, + "1386": 11, + "1387": 11, + "1388": 11, + "1389": 12, + "1390": 11, + "1391": 11, + "1392": 11, + "1393": 10, + "1394": 9, + "1395": 9, + "1396": 10, + "1397": 10, + "1399": 10, + "1400": 10, + "1401": 7, + "1402": 7, + "1403": 8, + "1404": 8, + "1405": 9, + "1407": 10, + "1430": 10, + "1480": 7, + "1481": 7, + "1497": 8, + "1498": 9, + "1787": 6, + "1788": 7, + "1847": 7, + "1848": 8, + "1849": 8, + "1850": 9, + "1851": 9, + "1855": 9, + "1858": 9, + "1859": 9, + "1860": 9, + "1861": 9, + "1862": 9, + "1864": 12, + "1865": 12, + "1866": 11, + "1867": 11, + "1869": 11, + "1870": 11, + "1871": 10, + "1872": 12, + "1873": 11, + "1946": 8, + "1947": 8, + "1948": 8, + "1949": 8, + "1956": 9, + "2073": 6, + "2074": 6, + "2075": 6, + "2076": 6, + "2077": 6, + "2078": 6, + "2079": 5, + "2080": 5, + "2081": 5, + "2082": 6, + "2083": 6, + "2084": 6, + "2085": 6, + "2086": 6, + "2087": 5, + "2120": 8, + "2249": 7, + "2250": 7, + "2251": 7, + "2252": 8, + "2253": 8, + "2254": 8, + "2255": 7, + "2257": 8, + "2258": 7, + "2259": 7, + "2261": 8, + "2262": 8, + "2263": 8, + "2276": 9, + "2278": 10, + "2312": 8, + "2313": 8, + "2314": 9, + "2352": 9, + "2353": 9, + "2354": 8, + "2355": 8, + "2356": 10, + "2358": 11, + "2359": 11, + "2360": 11, + "2361": 11, + "2362": 9, + "2363": 9, + "2365": 8, + "2368": 7, + "2377": 6, + "2378": 5, + "2379": 6, + "2380": 8, + "2381": 8, + "2382": 8, + "2383": 7, + "2384": 7, + "2385": 7, + "2386": 7, + "2387": 8, + "2388": 7, + "2389": 7, + "2393": 7, + "2394": 7, + "2395": 7, + "2396": 7, + "2397": 7, + "2399": 7, + "2400": 7, + "2401": 7, + "2402": 7, + "2436": 8, + "2443": 9, + "2444": 9, + "2467": 8, + "2468": 8, + "2469": 8, + "2472": 8, + "2474": 8, + "2476": 9, + "2477": 8, + "2478": 7, + "2480": 7, + "2481": 7, + "2482": 7, + "2551": 8, + "2552": 8, + "2553": 8, + "2554": 8, + "2557": 9, + "2558": 9, + "2560": 8, + "2563": 9, + "2564": 10, + "2565": 10, + "2566": 10, + "2567": 11, + "2568": 11, + "2570": 8, + "2589": 8, + "2591": 9, + "2592": 9, + "2593": 9, + "2594": 10, + "2595": 11, + "2596": 10, + "2597": 10, + "2657": 9, + "2658": 9, + "2785": 7, + "2806": 5, + "2807": 8, + "2808": 8, + "2809": 9, + "2810": 9, + "2811": 9, + "2866": 9, + "2869": 7, + "2870": 8, + "2871": 8, + "2872": 8, + "2873": 7, + "2874": 8, + "2894": 8, + "2895": 8, + "2896": 7, + "2897": 7, + "2898": 7, + "2899": 7, + "2900": 7, + "2901": 7, + "2902": 7, + "2903": 7, + "2904": 8, + "2905": 8, + "2906": 8, + "2907": 8, + "2908": 8, + "2910": 8, + "2950": 9, + "2952": 9, + "2953": 9, + "2955": 7, + "2958": 9, + "3054": 8, + "3058": 11, + "3059": 11, + "3060": 11, + "3061": 11, + "3099": 8, + "3100": 8, + "3101": 8, + "3106": 12, + "3109": 12, + "3110": 12, + "3111": 13, + "3112": 12, + "3114": 11, + "3116": 11, + "3117": 11, + "3119": 11, + "3120": 10, + "3121": 11, + "3122": 11, + "3124": 12, + "3125": 12, + "3126": 12, + "3127": 12, + "3178": 11, + "3179": 11, + "3180": 10, + "3181": 9, + "3182": 9, + "3186": 9, + "3221": 9, + "3222": 9, + "3223": 9, + "3224": 9, + "3226": 10, + "3228": 10, + "3229": 10, + "3230": 10, + "3231": 10, + "3269": 12, + "3270": 11, + "3271": 11, + "3272": 11, + "3273": 11, + "3274": 10, + "3275": 12, + "3276": 12, + "3277": 12, + "3278": 11, + "3279": 12, + "3280": 12, + "3281": 11, + "3282": 11, + "3283": 11, + "3284": 11, + "3285": 10, + "3287": 11, + "3288": 10, + "3289": 9, + "3333": 8, + "3334": 8, + "3335": 8, + "3336": 8, + "3337": 8, + "3339": 8, + "3340": 8, + "3341": 8, + "3342": 8, + "3343": 8, + "3344": 8, + "3345": 8, + "3350": 9, + "3351": 9, + "3354": 10, + "3355": 10, + "3356": 11, + "3377": 10, + "3378": 10, + "3379": 10, + "3380": 9, + "3381": 9, + "3382": 9, + "3383": 8, + "3384": 8, + "3385": 7, + "3386": 8, + "3557": 10, + "3573": 8, + "3574": 8, + "3701": 6, + "3810": 10, + "3811": 11, + "3812": 10, + "3813": 10, + "3816": 9, + "3933": 9, + "3934": 9, + "3935": 9, + "3936": 10, + "3944": 8, + "3945": 9, + "3946": 9, + "3947": 9, + "3948": 9, + "3949": 9, + "3950": 11, + "3951": 11, + "3952": 11, + "3990": 10, + "4000": 8, + "4001": 9, + "4002": 10, + "4003": 10, + "4004": 10, + "4006": 9, + "4007": 9, + "4083": 8, + "4200": 6, + "4281": 7, + "4283": 7, + "4398": 13, + "4399": 13, + "4400": 14, + "4401": 13, + "4402": 13, + "4403": 13, + "4404": 10, + "4405": 10, + "4406": 8, + "4407": 8, + "4410": 8, + "4411": 8, + "4428": 9, + "4463": 9, + "4464": 8, + "4465": 8, + "4466": 9, + "4467": 11, + "4468": 11, + "4469": 10, + "4470": 10, + "4526": 8, + "4527": 8, + "4528": 8, + "4529": 8, + "4530": 8, + "4531": 7, + "4746": 9, + "4747": 9, + "4748": 8, + "4749": 8, + "4750": 9, + "4751": 9, + "4752": 9, + "4753": 9, + "4758": 8, + "4759": 8, + "4760": 7, + "4761": 7, + "4762": 7, + "4763": 7, + "4764": 9, + "4765": 9, + "4766": 9, + "4767": 10, + "4768": 10, + "4769": 9, + "4771": 9, + "4772": 10, + "4824": 8, + "4825": 8, + "4826": 8, + "4827": 8, + "4828": 8, + "4829": 8, + "4830": 9, + "4836": 9, + "4838": 8, + "4888": 9, + "4889": 9, + "4890": 9, + "4892": 8, + "4893": 8, + "4894": 8, + "4895": 8, + "4953": 8, + "4954": 8, + "4955": 9, + "4956": 10, + "4957": 10, + "5033": 12, + "5034": 12, + "5035": 12, + "5036": 10, + "5108": 9, + "5109": 9, + "5111": 9, + "5112": 9, + "5113": 9, + "5114": 9, + "5115": 9, + "5116": 9, + "5117": 8, + "5118": 9, + "5119": 9, + "5120": 11, + "5121": 11, + "5140": 6, + "5141": 7, + "5142": 6, + "5143": 5, + "5144": 6, + "5145": 6, + "5146": 6, + "5147": 6, + "5148": 8, + "5149": 8, + "5150": 7, + "5151": 7, + "5152": 7, + "5154": 7, + "5155": 7, + "5156": 7, + "5157": 9, + "5158": 9, + "5160": 10, + "5195": 8, + "5196": 9, + "5197": 8, + "5199": 9, + "5201": 9, + "5202": 9, + "5259": 4, + "5260": 4, + "5261": 4, + "5262": 3, + "5263": 2, + "5264": 3, + "5265": 3, + "5266": 2, + "5267": 2, + "5268": 2, + "5286": 7, + "5396": 6, + "5397": 6, + "5398": 6, + "5399": 6, + "5400": 6, + "5401": 6, + "5402": 6, + "5403": 7, + "5404": 7, + "5405": 7, + "5406": 7, + "5407": 7, + "5408": 7, + "5409": 7, + "5410": 7, + "5411": 7, + "5412": 7, + "5426": 7, + "5427": 6, + "5429": 6, + "5431": 6, + "5432": 7, + "5486": 7, + "5527": 8, + "5528": 8, + "5529": 7, + "5534": 7, + "5536": 7, + "5537": 7, + "5538": 7, + "5540": 7, + "5541": 7, + "5542": 7, + "5543": 8, + "5544": 8, + "5547": 8, + "5548": 7, + "5549": 7, + "5550": 7, + "5552": 7, + "5742": 8, + "5743": 8, + "5744": 8, + "5745": 10, + "5746": 10, + "5747": 10, + "5748": 11, + "5751": 11, + "5752": 10, + "5753": 10, + "5754": 9, + "5755": 10, + "5756": 9, + "5757": 9, + "5800": 9, + "5802": 9, + "5803": 9, + "5804": 9, + "5805": 7, + "5893": 9, + "5897": 11, + "5898": 8, + "5899": 8, + "5900": 8, + "5901": 9, + "5902": 9, + "5903": 9, + "5943": 10, + "5944": 10, + "5945": 10, + "5946": 8, + "5947": 9, + "5948": 9, + "5955": 7, + "6014": 8, + "6015": 6, + "6109": 7, + "6110": 7, + "6111": 7, + "6687": 7, + "6688": 8, + "6689": 8, + "6690": 7, + "6700": 7, + "6701": 7, + "6703": 7, + "6704": 7, + "6860": 9, + "6861": 8, + "6862": 9, + "6863": 9, + "6864": 9, + "6865": 8, + "6866": 8, + "6867": 8, + "6964": 8, + "6965": 8, + "6968": 8, + "6969": 8, + "7009": 6, + "7010": 6, + "7011": 6, + "7017": 6, + "7018": 7, + "7019": 7, + "7020": 7, + "7069": 8, + "7070": 9, + "7075": 7, + "7078": 6, + "7131": 11, + "7140": 11, + "7141": 10, + "7552": 11, + "7892": 5, + "7895": 6, + "8154": 9, + "8155": 9 + }, + "R": { + "62": 8, + "65": 9, + "66": 9, + "75": 9, + "134": 10, + "135": 11, + "137": 9, + "138": 8, + "139": 8, + "330": 7, + "337": 7, + "528": 7, + "529": 7, + "530": 6, + "540": 7, + "541": 7, + "771": 9, + "772": 9, + "786": 6, + "787": 6, + "788": 6, + "789": 6, + "873": 10, + "898": 9, + "925": 10, + "927": 9, + "928": 9, + "929": 9, + "930": 11, + "931": 10, + "932": 9, + "933": 9, + "934": 8, + "935": 8, + "937": 8, + "962": 10, + "964": 10, + "965": 11, + "966": 12, + "967": 12, + "968": 12, + "969": 12, + "970": 12, + "972": 11, + "978": 11, + "980": 11, + "981": 11, + "982": 11, + "999": 9, + "1000": 9, + "1005": 11, + "1014": 11, + "1015": 11, + "1016": 11, + "1017": 11, + "1018": 12, + "1019": 12, + "1021": 12, + "1191": 11, + "1221": 10, + "1241": 8, + "1245": 8, + "1261": 6, + "1262": 6, + "1273": 7, + "1274": 7, + "1275": 6, + "1309": 10, + "1310": 10, + "1311": 10, + "1312": 10, + "1314": 10, + "1365": 9, + "1366": 10, + "1368": 9, + "1372": 8, + "1373": 8, + "1374": 8, + "1375": 8, + "1376": 7, + "1381": 9, + "1382": 9, + "1383": 8, + "1385": 9, + "1386": 9, + "1405": 10, + "1406": 10, + "1407": 9, + "1408": 9, + "1433": 8, + "1434": 8, + "1435": 8, + "1458": 7, + "1459": 7, + "1467": 9, + "1468": 8, + "1469": 8, + "1470": 8, + "1471": 8, + "1472": 8, + "1474": 8, + "1475": 9, + "1477": 9, + "1766": 7, + "1839": 10, + "1840": 10, + "1849": 9, + "1851": 8, + "1866": 9, + "1867": 8, + "1930": 8, + "1931": 8, + "1932": 8, + "1933": 8, + "1934": 8, + "1935": 7, + "1936": 7, + "1937": 7, + "2050": 6, + "2051": 6, + "2052": 5, + "2053": 5, + "2054": 5, + "2055": 5, + "2056": 6, + "2057": 6, + "2058": 6, + "2059": 6, + "2060": 6, + "2061": 6, + "2095": 8, + "2096": 8, + "2099": 8, + "2100": 8, + "2101": 8, + "2102": 7, + "2194": 9, + "2227": 8, + "2228": 8, + "2229": 7, + "2230": 7, + "2231": 9, + "2232": 8, + "2233": 9, + "2234": 9, + "2235": 9, + "2236": 8, + "2237": 8, + "2238": 8, + "2281": 9, + "2282": 8, + "2286": 8, + "2287": 8, + "2288": 9, + "2289": 9, + "2328": 10, + "2329": 10, + "2330": 10, + "2331": 9, + "2333": 11, + "2334": 11, + "2337": 9, + "2338": 9, + "2339": 7, + "2340": 7, + "2341": 8, + "2342": 9, + "2343": 9, + "2344": 7, + "2345": 7, + "2346": 7, + "2347": 7, + "2356": 7, + "2357": 8, + "2359": 7, + "2360": 6, + "2361": 6, + "2362": 6, + "2368": 7, + "2369": 7, + "2370": 7, + "2371": 7, + "2372": 7, + "2373": 7, + "2374": 8, + "2422": 9, + "2455": 7, + "2456": 7, + "2529": 9, + "2533": 9, + "2535": 9, + "2536": 10, + "2537": 10, + "2538": 10, + "2540": 11, + "2541": 9, + "2542": 10, + "2543": 9, + "2564": 8, + "2566": 8, + "2567": 9, + "2568": 9, + "2569": 11, + "2781": 8, + "2782": 7, + "2783": 8, + "2784": 8, + "2785": 9, + "2786": 9, + "2787": 9, + "2788": 8, + "2789": 8, + "2790": 8, + "2816": 10, + "2863": 8, + "2864": 9, + "2865": 7, + "2866": 7, + "2867": 7, + "2868": 7, + "2869": 7, + "2870": 7, + "2871": 7, + "2872": 7, + "2873": 7, + "2874": 7, + "2875": 7, + "2876": 7, + "2877": 8, + "2878": 8, + "2879": 8, + "2880": 8, + "2881": 8, + "2882": 8, + "2883": 8, + "2884": 9, + "2885": 9, + "2932": 9, + "2986": 7, + "2989": 6, + "2990": 5, + "3034": 10, + "3037": 11, + "3038": 11, + "3039": 11, + "3040": 10, + "3086": 12, + "3087": 12, + "3089": 11, + "3092": 11, + "3094": 11, + "3095": 11, + "3096": 12, + "3097": 12, + "3108": 11, + "3109": 11, + "3110": 11, + "3111": 11, + "3112": 11, + "3113": 11, + "3114": 11, + "3148": 11, + "3149": 10, + "3150": 10, + "3151": 11, + "3152": 12, + "3194": 9, + "3195": 9, + "3259": 12, + "3260": 11, + "3262": 10, + "3263": 9, + "3264": 9, + "3266": 9, + "3267": 10, + "3308": 8, + "3309": 7, + "3310": 8, + "3311": 8, + "3312": 8, + "3313": 7, + "3314": 8, + "3360": 6, + "3361": 7, + "3362": 7, + "3363": 7, + "3385": 10, + "3506": 11, + "3507": 11, + "3509": 11, + "3510": 11, + "3611": 11, + "3612": 11, + "3723": 7, + "3726": 9, + "3911": 10, + "3912": 10, + "3913": 10, + "3923": 9, + "3924": 9, + "3925": 9, + "3927": 11, + "3928": 11, + "3929": 11, + "3930": 11, + "3966": 11, + "3970": 10, + "3971": 10, + "3972": 9, + "3975": 8, + "3976": 8, + "3978": 9, + "3979": 10, + "3980": 9, + "3981": 9, + "3982": 9, + "3984": 10, + "3985": 10, + "3986": 10, + "4063": 8, + "4064": 6, + "4097": 8, + "4098": 9, + "4099": 10, + "4180": 8, + "4181": 8, + "4249": 5, + "4252": 8, + "4253": 8, + "4354": 12, + "4356": 11, + "4357": 11, + "4371": 13, + "4372": 13, + "4373": 12, + "4374": 11, + "4375": 11, + "4376": 8, + "4377": 8, + "4378": 8, + "4379": 9, + "4380": 9, + "4381": 9, + "4382": 8, + "4383": 9, + "4432": 8, + "4433": 9, + "4434": 9, + "4435": 9, + "4503": 8, + "4682": 11, + "4684": 12, + "4725": 9, + "4727": 9, + "4728": 8, + "4729": 8, + "4730": 8, + "4731": 8, + "4732": 8, + "4733": 7, + "4734": 7, + "4735": 7, + "4736": 9, + "4737": 9, + "4738": 9, + "4739": 9, + "4740": 9, + "4741": 9, + "4742": 9, + "4785": 10, + "4786": 10, + "4787": 10, + "4788": 10, + "4789": 10, + "4795": 8, + "4796": 9, + "4807": 11, + "4808": 10, + "4870": 8, + "4871": 7, + "4872": 7, + "4930": 8, + "4931": 8, + "4932": 9, + "4933": 9, + "4934": 10, + "4958": 11, + "4959": 10, + "4963": 9, + "4964": 9, + "4965": 9, + "4966": 9, + "4967": 9, + "4968": 9, + "5098": 9, + "5109": 6, + "5110": 6, + "5111": 6, + "5112": 6, + "5113": 6, + "5114": 6, + "5115": 6, + "5116": 6, + "5117": 5, + "5118": 5, + "5119": 6, + "5120": 7, + "5121": 7, + "5122": 7, + "5123": 8, + "5124": 7, + "5125": 7, + "5126": 7, + "5127": 7, + "5128": 7, + "5129": 8, + "5130": 9, + "5131": 9, + "5132": 10, + "5133": 10, + "5134": 10, + "5135": 10, + "5136": 10, + "5137": 10, + "5144": 10, + "5169": 8, + "5170": 8, + "5171": 9, + "5232": 4, + "5233": 4, + "5236": 4, + "5237": 4, + "5238": 4, + "5239": 3, + "5240": 3, + "5241": 3, + "5242": 2, + "5243": 2, + "5244": 2, + "5369": 6, + "5370": 6, + "5371": 6, + "5372": 6, + "5374": 6, + "5377": 7, + "5378": 7, + "5392": 7, + "5393": 7, + "5394": 7, + "5395": 7, + "5396": 7, + "5397": 6, + "5398": 6, + "5399": 6, + "5400": 6, + "5401": 6, + "5402": 7, + "5427": 9, + "5464": 6, + "5465": 6, + "5466": 6, + "5467": 6, + "5468": 6, + "5495": 9, + "5504": 7, + "5505": 7, + "5506": 7, + "5507": 7, + "5508": 7, + "5509": 7, + "5510": 7, + "5511": 6, + "5512": 6, + "5516": 8, + "5517": 8, + "5520": 6, + "5521": 6, + "5526": 8, + "5679": 10, + "5684": 9, + "5685": 9, + "5686": 10, + "5687": 10, + "5688": 9, + "5689": 9, + "5690": 9, + "5691": 8, + "5692": 7, + "5693": 7, + "5694": 7, + "5759": 9, + "5764": 7, + "5766": 7, + "5768": 7, + "5778": 10, + "5817": 11, + "5905": 10, + "5906": 10, + "5910": 10, + "5911": 10, + "5912": 10, + "5913": 10, + "5914": 10, + "5915": 10, + "5946": 8, + "5947": 7, + "5989": 8, + "5990": 8, + "5991": 8, + "5992": 6, + "5993": 6, + "6088": 7, + "6089": 7, + "6377": 10, + "6450": 7, + "6574": 7, + "6627": 7, + "6628": 7, + "6632": 7, + "6641": 7, + "6843": 8, + "6844": 9, + "6845": 10, + "6847": 10, + "7044": 8, + "7045": 8, + "7046": 8, + "7051": 6, + "7052": 6, + "7053": 7, + "7054": 7, + "7055": 7, + "7056": 7, + "7105": 10, + "7106": 10, + "7107": 10, + "7108": 10, + "7109": 11, + "7135": 11, + "7136": 11, + "7137": 12, + "7224": 5, + "7225": 6, + "7226": 6, + "7293": 6, + "7437": 9, + "7438": 9, + "8060": 5, + "8121": 8, + "8123": 9, + "8124": 9, + "8125": 9, + "8126": 9, + "8127": 9, + "8128": 9, + "8129": 9, + "8130": 8, + "8132": 8 + } +} \ No newline at end of file From 654bceec7694f8cea0ada2b4e0438f3fb2ca2371 Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Fri, 3 Nov 2023 10:23:43 +0000 Subject: [PATCH 4/5] Auto updating index --- index.json | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/index.json b/index.json index 292ba35..2677b4e 100644 --- a/index.json +++ b/index.json @@ -49,6 +49,32 @@ } } }, + "norovirus-gii": { + "800": { + "v1.0.0": { + "algorithmversion": "primaldigest:1.2.2", + "ampliconsize": 800, + "authors": [ + "quick lab", + "artic network" + ], + "citations": [], + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/info.json", + "license": "CC BY-SA 4.0", + "primer_bed_md5": "3191ec8a80f14a5688d561fe2cf77e34", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/primer.bed", + "primerclass": "primerschemes", + "reference_fasta_md5": "88cba0415494cd9837e2523051cb636f", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/norovirus-gii/800/v1.0.0/reference.fasta", + "schemename": "norovirus-gii", + "schemeversion": "v1.0.0", + "species": [ + 122929 + ], + "status": "draft" + } + } + }, "sars-cov-2": { "400": { "v1.0.0": { From 2ff835b9ff6da194bca15adf4091829b5c72017a Mon Sep 17 00:00:00 2001 From: ChrisgKent Date: Fri, 3 Nov 2023 11:45:57 +0000 Subject: [PATCH 5/5] Auto updating index --- index.json | 60 +++++++++++++++++++++++++++--------------------------- 1 file changed, 30 insertions(+), 30 deletions(-) diff --git a/index.json b/index.json index 463352d..2677b4e 100644 --- a/index.json +++ b/index.json @@ -11,13 +11,13 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "f1874f2b2332dff4b4cd6f0075f128dd", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7612eab3e2389215206ae17187da1791", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.0.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.0.0", "species": [ @@ -33,13 +33,13 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "dd96ade2e5c59377808368cc116a8361", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7612eab3e2389215206ae17187da1791", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/hbv/500/v1.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/hbv/500/v1.1.0/reference.fasta", "schemename": "hbv", "schemeversion": "v1.1.0", "species": [ @@ -87,13 +87,13 @@ "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "907d8d0e3efecd82e07120eda2b70d89", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v1.0.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v1.0.0", "species": [ @@ -111,13 +111,13 @@ "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "c9916963e43951541e8a11274e0ac0df", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v2.0.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v2.0.0", "species": [ @@ -135,13 +135,13 @@ "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "03e1c3eecc21bdb66a4bec990e0225cc", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v3.0.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v3.0.0", "species": [ @@ -157,13 +157,13 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6c42c61f304702adc6c550ad0941ed6f", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.0.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v4.0.0", "species": [ @@ -181,13 +181,13 @@ "citations": [ "https://doi.org/10.1038/nprot.2017.066" ], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "98ffdb9c0e31f2c1c819c7a4d2c8a048", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v4.1.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v4.1.0", "species": [ @@ -203,13 +203,13 @@ "artic network" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6292814b0ec248605c72707d34dda1eb", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.0.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v5.0.0", "species": [ @@ -225,13 +225,13 @@ "quick lab" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "6de462d8ffffcfb2aa37f7eeb205d94b", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.2.0/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v5.2.0", "species": [ @@ -248,13 +248,13 @@ "bccdc" ], "citations": [], - "info_json_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/info.json", + "info_json_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/info.json", "license": "CC-BY-4.0", "primer_bed_md5": "722d56c381bf301aa9c5ae8721c78063", - "primer_bed_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/primer.bed", + "primer_bed_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/primer.bed", "primerclass": "primerschemes", "reference_fasta_md5": "7f8995394dfc7d5ffeb9fe8322ade58c", - "reference_fasta_url": "https://raw.githubusercontent.com/quick-lab/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/reference.fasta", + "reference_fasta_url": "https://raw.githubusercontent.com/ChrisgKent/primerschemes/main/primerschemes/sars-cov-2/400/v5.3.2/reference.fasta", "schemename": "sars-cov-2", "schemeversion": "v5.3.2", "species": [